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Conserved domains on  [gi|1952697173|ref|XP_038310134|]
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prestin isoform X2 [Canis lupus familiaris]

Protein Classification

SLC26A/SulP family transporter( domain architecture ID 1000281)

SLC26A/SulP family transporter may be an inorganic anion uptake transporter or an anion:anion exchange transporter, similar to human anion exchange transporter that acts as a sodium-independent DIDS-sensitive anion exchanger mediating bicarbonate, chloride, sulfate and oxalate transport

Gene Ontology:  GO:0008509|GO:0015698
PubMed:  12759755|23506885
SCOP:  4006096
TCDB:  2.A.53

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK11660 super family cl46980
putative transporter; Provisional
66-672 3.26e-110

putative transporter; Provisional


The actual alignment was detected with superfamily member TIGR00815:

Pssm-ID: 481320 [Multi-domain]  Cd Length: 552  Bit Score: 344.70  E-value: 3.26e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173  66 PITKWLPAYKFKEYvLGDLVSGISTGVLQLPQ---------------------GPFaVISLMIG--GVAVRLVPDDIVIP 122
Cdd:TIGR00815   1 PVLRWLRKYRLKKF-KGDLMAGLTVGILLIPQaiayaklaglppiyglytsfvPPI-IYALFGSsrHIAIGPTASVSLLL 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 123 GGVNATNGTEARDALRVKVAMSVTLLSGIIQFCLGVCRFGFVAIYLTEPLVRGFTTAAAVHVFTSMLKYLFGVKTKRYSG 202
Cdd:TIGR00815  79 GSLVQREGLQGLFDDYIRLAFTATLLAGIFQVIMGLLRLGFLIEYLSHAVLVGFTAGAAITIGLSQLKGLLGLSIFVKTD 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 203 IFSVVYSTVAvlqNVKNLNVCSLGVGLMVFGLLLGGKEFNERFKEKLPAPIPLEFFAVVMGTGISAGFnLKESYNVDVVG 282
Cdd:TIGR00815 159 ILGVVISTWA---SLHQNNWCTLVIGLLFLLFLLATKELGKRNKKLLWAPAPAPLLVVVLATLIVTIG-LHDSQGVSIVG 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 283 TLPLGLL--PPANPDTSLFHLVYVDAIAIAIVGFSVTISMAKTLANKHGYQVDGNQELIALGLCNSIGSLFQTFSISCSL 360
Cdd:TIGR00815 235 HIPQGLSffPPITFTWQHLPTLAPDAIAIAIVGLTESILTARVFAAMTGYEIDANKELVALGIANIVGSFFSCYPATGSL 314
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 361 SRSLVQEGTGGKTQLAGCLASLMILLVILATGFLFESLPQAVLSAIVIVNLKGMFmQFSDLPFFWRTSKIELTIWLTTFV 440
Cdd:TIGR00815 315 SRTAVNYKAGCKTQLSAIVMAIVVLLVLLVLAPLFYYIPLAALAAIIISAAVGLI-DIRELYLLWKADKMDFVVWLGTFL 393
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 441 SSLFLGLDYGLITAVIIALLTVIYRTQSPSYKVLGQLPDTDVYIDIDAYEEVKEIPGIKIFQINAPIYYANSDLYSNALK 520
Cdd:TIGR00815 394 GVVFTSIEIGLLVGVSLSAFFFILRVARPRAAVLGRIPGTEDYENIEQYPKAQTPPGILIFRVDGPLYFANAEDLKERLL 473
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 521 RKTgvnpavimgarrkamkeyakevgnanvanatvvkVDAEVDGedatkpeqeddevkyppivikstfpeelqrfmppgd 600
Cdd:TIGR00815 474 KWL----------------------------------ETLELDP------------------------------------ 483
                         570       580       590       600       610       620       630
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1952697173 601 tiHTVILDFTQVNFIDSVGVKTLAGIVKEYGDVGIYVYLAGCSAQVVNDLTQNRFFENPAlKELLFHSIHDA 672
Cdd:TIGR00815 484 --QIIILDMSAVPFLDTSGIHALEELFKELKARGIQLLLANPNPAVISTLARAGFVELIG-EEHFFPSVHDA 552
 
Name Accession Description Interval E-value
sulP TIGR00815
high affinity sulphate transporter 1; The SulP family is a large and ubiquitous family with ...
66-672 3.26e-110

high affinity sulphate transporter 1; The SulP family is a large and ubiquitous family with over 30 sequenced members derived from bacteria, fungi, plants and animals. Many organisms including Bacillus subtilis, Synechocystis sp, Saccharomyces cerevisiae, Arabidopsis thaliana and Caenorhabditis elegans possess multiple SulP family paralogues. Many of these proteins are functionally characterized, and all are sulfate uptake transporters. Some transport their substrate with high affinities, while others transport it with relatively low affinities. Most function by SO42- :H+symport, but SO42- :HCO3- antiport has been reported for the rat protein (spP45380). The bacterial proteins vary in size from 434 residues to 566 residues with one exception, a Mycobacterium tuberculosis protein with 784 residues. The eukaryotic proteins vary in size from 611 residues to 893 residues with one exception, a protein designated "early nodulin 70 protein" from Glycine max which is reported to be of 485 residues. Thus, the eukaryotic proteins are almost without exception larger than the prokaryotic proteins. These proteins exhibit 10-13 putative transmembrane a-helical spanners (TMSs) depending on the protein. The phylogenetic tree for the SulP family reveals five principal branches. Three of these are bacterial specific as follows: one bears a single protein from M. tuberculosis; a second bears two proteins, one from M. tuberculosis, the other from Synechocystis sp, and the third bears all remaining prokaryotic proteins. The remaining two clusters bear only eukaryotic proteins with the animal proteins all localized to one branch and the plant and fungal proteins localized to the other. The generalized transport reactions catalyzed by SulP family proteins are: (1) SO42- (out) + nH+ (out) --> SO42- (in) + nH+ (in). (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out). [Transport and binding proteins, Anions]


Pssm-ID: 273284 [Multi-domain]  Cd Length: 552  Bit Score: 344.70  E-value: 3.26e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173  66 PITKWLPAYKFKEYvLGDLVSGISTGVLQLPQ---------------------GPFaVISLMIG--GVAVRLVPDDIVIP 122
Cdd:TIGR00815   1 PVLRWLRKYRLKKF-KGDLMAGLTVGILLIPQaiayaklaglppiyglytsfvPPI-IYALFGSsrHIAIGPTASVSLLL 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 123 GGVNATNGTEARDALRVKVAMSVTLLSGIIQFCLGVCRFGFVAIYLTEPLVRGFTTAAAVHVFTSMLKYLFGVKTKRYSG 202
Cdd:TIGR00815  79 GSLVQREGLQGLFDDYIRLAFTATLLAGIFQVIMGLLRLGFLIEYLSHAVLVGFTAGAAITIGLSQLKGLLGLSIFVKTD 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 203 IFSVVYSTVAvlqNVKNLNVCSLGVGLMVFGLLLGGKEFNERFKEKLPAPIPLEFFAVVMGTGISAGFnLKESYNVDVVG 282
Cdd:TIGR00815 159 ILGVVISTWA---SLHQNNWCTLVIGLLFLLFLLATKELGKRNKKLLWAPAPAPLLVVVLATLIVTIG-LHDSQGVSIVG 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 283 TLPLGLL--PPANPDTSLFHLVYVDAIAIAIVGFSVTISMAKTLANKHGYQVDGNQELIALGLCNSIGSLFQTFSISCSL 360
Cdd:TIGR00815 235 HIPQGLSffPPITFTWQHLPTLAPDAIAIAIVGLTESILTARVFAAMTGYEIDANKELVALGIANIVGSFFSCYPATGSL 314
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 361 SRSLVQEGTGGKTQLAGCLASLMILLVILATGFLFESLPQAVLSAIVIVNLKGMFmQFSDLPFFWRTSKIELTIWLTTFV 440
Cdd:TIGR00815 315 SRTAVNYKAGCKTQLSAIVMAIVVLLVLLVLAPLFYYIPLAALAAIIISAAVGLI-DIRELYLLWKADKMDFVVWLGTFL 393
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 441 SSLFLGLDYGLITAVIIALLTVIYRTQSPSYKVLGQLPDTDVYIDIDAYEEVKEIPGIKIFQINAPIYYANSDLYSNALK 520
Cdd:TIGR00815 394 GVVFTSIEIGLLVGVSLSAFFFILRVARPRAAVLGRIPGTEDYENIEQYPKAQTPPGILIFRVDGPLYFANAEDLKERLL 473
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 521 RKTgvnpavimgarrkamkeyakevgnanvanatvvkVDAEVDGedatkpeqeddevkyppivikstfpeelqrfmppgd 600
Cdd:TIGR00815 474 KWL----------------------------------ETLELDP------------------------------------ 483
                         570       580       590       600       610       620       630
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1952697173 601 tiHTVILDFTQVNFIDSVGVKTLAGIVKEYGDVGIYVYLAGCSAQVVNDLTQNRFFENPAlKELLFHSIHDA 672
Cdd:TIGR00815 484 --QIIILDMSAVPFLDTSGIHALEELFKELKARGIQLLLANPNPAVISTLARAGFVELIG-EEHFFPSVHDA 552
Sulfate_transp pfam00916
Sulfate permease family; This family of integral membrane proteins are known as the Sulfate ...
81-438 8.89e-88

Sulfate permease family; This family of integral membrane proteins are known as the Sulfate Permease (SulP) family. SulP is a large family found in all domains of life. Although sulfate is a commonly transported ion there are many other activities in this family. See the TCDB description for a comprehensive summary.


Pssm-ID: 459995 [Multi-domain]  Cd Length: 379  Bit Score: 280.29  E-value: 8.89e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173  81 LGDLVSGISTGVLQLPQ-------------------------------------GPFAVISLMIGGVAVRLVPDDivipg 123
Cdd:pfam00916   2 KGDLIAGITVAILAIPQalayailaglppiyglyssfvpgfvyalfgtsrhlaiGPVAVLSLMVGAAIAKLAAKD----- 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 124 gvnatngtearDALRVKVAMSVTLLSGIIQFCLGVCRFGFVAIYLTEPLVRGFTTAAAVHVFTSMLKYLFGVKTK-RYSG 202
Cdd:pfam00916  77 -----------PELGIALAFTLTFLAGIIQLALGLLRLGFLVTFLSHAVISGFMGGAAIVILLSQLKVLLGLTNFsGPGY 145
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 203 IFSVVYStvaVLQNVKNLNVCSLGVGLMVFGLLLGGKEFNERFKEKLPAPIPLEFFAVVMGTGISAGFNLKESYNVDVVG 282
Cdd:pfam00916 146 VVSVLQS---LFTNLDKVNLATLVLGLLVLVILLFTKELGKKYKKLFWIPAPAPLVAVVLATLVSAIFDLLRRYGVKIVG 222
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 283 TLPLGLLPPANPDTSLFHL--VYVDAIAIAIVGFSVTISMAKTLANKHGYQVDGNQELIALGLCNSIGSLFQTFSISCSL 360
Cdd:pfam00916 223 EIPSGLPPFSLPKFSWSLLsaLLPDALAIAIVGLLEAIAISKSFAKKKGYEVDSNQELVALGFANILSGLFGGYPATGAF 302
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1952697173 361 SRSLVQEGTGGKTQLAGCLASLMILLVILATGFLFESLPQAVLSAIVIVNLKGMfMQFSDLPFFWRTSKIELTIWLTT 438
Cdd:pfam00916 303 SRSAVNIKAGAKTPLSGIIMAVIVLLVLLFLTPLFAYIPKAVLAAIIIVAGKGL-IDYRELKHLWRLSKLDFLIWLAT 379
SUL1 COG0659
Sulfate permease or related transporter, MFS superfamily [Inorganic ion transport and ...
77-673 1.14e-80

Sulfate permease or related transporter, MFS superfamily [Inorganic ion transport and metabolism];


Pssm-ID: 440424 [Multi-domain]  Cd Length: 529  Bit Score: 266.20  E-value: 1.14e-80
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173  77 KEYVLGDLVSGISTGVLQLPQG-PFAVIS----------LMIGGVAVRLV---------PDD--IVIPGGVNATNGTear 134
Cdd:COG0659     4 RSNLRGDLLAGLTVALVALPLAlAFAIAAglppeaglyaAIVGGIVYALFggsrllisgPTAalAVVVAAAVAPLGS--- 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 135 dalrVKVAMSVTLLSGIIQFCLGVCRFGFVAIYLTEPLVRGFTTAAAVHVFTSMLKYLFGVKTKRYSGIFSVVystvAVL 214
Cdd:COG0659    81 ----LALLLAATLLAGVLQLLLGLLRLGRLARFIPRPVIVGFLAGIAILIILGQLPHLLGLPAPGGSFLEKLA----ALL 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 215 QNVKNLNVCSLGVGLMVFGLLLGGKefneRFKEKLPAPIplefFAVVMGTGISAGFNLkesyNVDVVGTLPLGLLPPANP 294
Cdd:COG0659   153 AALGEINPPTLALGLLTLAILLLLP----RLLKRIPGPL----VAVVLGTLLVWLLGL----DVATVGEIPSGLPSFSLP 220
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 295 DTSLFHL--VYVDAIAIAIVGFSVTISMAKTLANKHGYQVDGNQELIALGLCNSIGSLFQTFSISCSLSRSLVQEGTGGK 372
Cdd:COG0659   221 DFSLETLraLLPPALTIALVGSIESLLTARAVDAMTGTRSDPNRELIAQGLANIASGLFGGLPVTGSISRSAVNVKAGAR 300
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 373 TQLAGCLASLMILLVILATGFLFESLPQAVLSAIVIVNLKGMFmQFSDLPFFWRTSKIELTIWLTTFVSSLFLGLDYGLI 452
Cdd:COG0659   301 TRLSGIVHALFLLLVLLFLAPLLAYIPLAALAAILIVVGIGLI-DWRSFRRLWRAPRSDFLVMLVTFLVTVFTDLLIGVL 379
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 453 TAVIIALLTVIYRTQSPSYKVLgQLPDTDvYIDIDAYEEVKEIPGIKIFQINAPIYYANSDlysnalkrktgvnpavimg 532
Cdd:COG0659   380 VGVLLSLLLFLRRVSRPHVVVL-RVPGTH-FRNVERHPEAETGPGVLVYRLDGPLFFGNAE------------------- 438
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 533 arrkamkeyakevgnanvanatvvkvdaevdgedatkpeqeddevkyppiviksTFPEELQRFMPPGDtihTVILDFTQV 612
Cdd:COG0659   439 ------------------------------------------------------RLKERLDALAPDPR---VVILDLSAV 461
                         570       580       590       600       610       620
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1952697173 613 NFIDSVGVKTLAGIVKEYGDVGIYVYLAGCSAQVVNDLTQNRFFENPAlKELLFHSIHDAV 673
Cdd:COG0659   462 PFIDATALEALEELAERLRARGITLELAGLKPPVRDLLERAGLLDELG-EERVFPDLDEAL 521
STAS_SulP_like_sulfate_transporter cd07042
Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, ...
489-657 5.19e-14

Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, plays a role in the function and regulation of the transport activity, proposed general NTP binding function; The SulP family is a large and diverse family of anion transporters, with members from eubacteria, plants, fungi, and mammals. They contain 10 to 14 transmembrane helices which form the catalytic core of the protein and a C-terminal extension, the STAS (Sulphate Transporter and AntiSigma factor antagonist) domain which plays a role in the function and regulation of the transport activity. The STAS domain is found in the C-terminal region of sulphate transporters and bacterial anti-sigma factor antagonists. It has been suggested that this domain may have a general NTP binding function.


Pssm-ID: 132913 [Multi-domain]  Cd Length: 107  Bit Score: 68.42  E-value: 5.19e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 489 YEEVKEIPGIKIFQINAPIYYANSDLYSNALKRKTGVNPavimgarrkamkeyakevgnanvanatvvkvdaevdgedat 568
Cdd:cd07042     1 YPLAEEPPGVLIYRIDGPLFFGNAEYFKDRLLRLVDEDP----------------------------------------- 39
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 569 kpeqeddevkyppivikstfpeelqrfmppgdTIHTVILDFTQVNFIDSVGVKTLAGIVKEYGDVGIYVYLAGCSAQVVN 648
Cdd:cd07042    40 --------------------------------PLKVVILDLSAVNFIDSTAAEALEELVKDLRKRGVELYLAGLNPQVRE 87

                  ....*....
gi 1952697173 649 DLTQNRFFE 657
Cdd:cd07042    88 LLERAGLLD 96
PRK11660 PRK11660
putative transporter; Provisional
146-531 1.01e-12

putative transporter; Provisional


Pssm-ID: 183265 [Multi-domain]  Cd Length: 568  Bit Score: 71.13  E-value: 1.01e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 146 TLLSGIIQFCLGVCRFGFVAIYLTEPLVRGFTTAAAVHVFTSMLKYLFGVKTKRYSGIFsvVYSTVAVLQNVKNLNVCSL 225
Cdd:PRK11660  109 TLMSGIILILMGLARLGRLIEYIPLSVTLGFTSGIGIVIATLQIKDFFGLQMAHVPEHY--LEKVGALFQALPTINWGDA 186
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 226 GVGLMVFGLLLggkeFNERFKEKLPAPIPleffAVVMGTGISAGFNLKEsYNVDVVGT------------------LPLG 287
Cdd:PRK11660  187 LIGIVTLGVLI----LWPRLKIRLPGHLP----ALLAGTAVMGVLNLLG-GHVATIGSrfhyvladgsqgngipplLPQF 257
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 288 LLPPANPDT---------SLFHLVYVDAIAIAIVGFSVTISMAKTLANKHGYQVDGNQELIALGLCNSIGSLFQTFSISC 358
Cdd:PRK11660  258 VLPWNLPGAdgqpftlswDLIRALLPAAFSMAMLGAIESLLCAVVLDGMTGTKHSANSELVGQGLGNIVAPFFGGITATA 337
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 359 SLSRSLVQEGTGGKTQLAGCLASLMILLVILATGFLFESLPQAVLSAIVIVNLKGMfmqfSDLPFFWRTSKI----ELTI 434
Cdd:PRK11660  338 AIARSAANVRAGATSPISAVIHALLVLLALLVLAPLLSYLPLSAMAALLLMVAWNM----SEAHKVVDLLRHapkdDIIV 413
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 435 WLTTFVSSLFLGLDYGLITAVIIALLTVIYRtqspsykvLGQLpdTDVYiDIDAYEevkEIPGIKIFQINAPIYYANSDL 514
Cdd:PRK11660  414 MLLCMSLTVLFDMVIAISVGIVLASLLFMRR--------IAEM--TRLA-PISVQD---VPDDVLVLRINGPLFFAAAER 479
                         410
                  ....*....|....*..
gi 1952697173 515 YSNALKRKTGVNPAVIM 531
Cdd:PRK11660  480 LFTELESRTEGKRIVVL 496
 
Name Accession Description Interval E-value
sulP TIGR00815
high affinity sulphate transporter 1; The SulP family is a large and ubiquitous family with ...
66-672 3.26e-110

high affinity sulphate transporter 1; The SulP family is a large and ubiquitous family with over 30 sequenced members derived from bacteria, fungi, plants and animals. Many organisms including Bacillus subtilis, Synechocystis sp, Saccharomyces cerevisiae, Arabidopsis thaliana and Caenorhabditis elegans possess multiple SulP family paralogues. Many of these proteins are functionally characterized, and all are sulfate uptake transporters. Some transport their substrate with high affinities, while others transport it with relatively low affinities. Most function by SO42- :H+symport, but SO42- :HCO3- antiport has been reported for the rat protein (spP45380). The bacterial proteins vary in size from 434 residues to 566 residues with one exception, a Mycobacterium tuberculosis protein with 784 residues. The eukaryotic proteins vary in size from 611 residues to 893 residues with one exception, a protein designated "early nodulin 70 protein" from Glycine max which is reported to be of 485 residues. Thus, the eukaryotic proteins are almost without exception larger than the prokaryotic proteins. These proteins exhibit 10-13 putative transmembrane a-helical spanners (TMSs) depending on the protein. The phylogenetic tree for the SulP family reveals five principal branches. Three of these are bacterial specific as follows: one bears a single protein from M. tuberculosis; a second bears two proteins, one from M. tuberculosis, the other from Synechocystis sp, and the third bears all remaining prokaryotic proteins. The remaining two clusters bear only eukaryotic proteins with the animal proteins all localized to one branch and the plant and fungal proteins localized to the other. The generalized transport reactions catalyzed by SulP family proteins are: (1) SO42- (out) + nH+ (out) --> SO42- (in) + nH+ (in). (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out). [Transport and binding proteins, Anions]


Pssm-ID: 273284 [Multi-domain]  Cd Length: 552  Bit Score: 344.70  E-value: 3.26e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173  66 PITKWLPAYKFKEYvLGDLVSGISTGVLQLPQ---------------------GPFaVISLMIG--GVAVRLVPDDIVIP 122
Cdd:TIGR00815   1 PVLRWLRKYRLKKF-KGDLMAGLTVGILLIPQaiayaklaglppiyglytsfvPPI-IYALFGSsrHIAIGPTASVSLLL 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 123 GGVNATNGTEARDALRVKVAMSVTLLSGIIQFCLGVCRFGFVAIYLTEPLVRGFTTAAAVHVFTSMLKYLFGVKTKRYSG 202
Cdd:TIGR00815  79 GSLVQREGLQGLFDDYIRLAFTATLLAGIFQVIMGLLRLGFLIEYLSHAVLVGFTAGAAITIGLSQLKGLLGLSIFVKTD 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 203 IFSVVYSTVAvlqNVKNLNVCSLGVGLMVFGLLLGGKEFNERFKEKLPAPIPLEFFAVVMGTGISAGFnLKESYNVDVVG 282
Cdd:TIGR00815 159 ILGVVISTWA---SLHQNNWCTLVIGLLFLLFLLATKELGKRNKKLLWAPAPAPLLVVVLATLIVTIG-LHDSQGVSIVG 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 283 TLPLGLL--PPANPDTSLFHLVYVDAIAIAIVGFSVTISMAKTLANKHGYQVDGNQELIALGLCNSIGSLFQTFSISCSL 360
Cdd:TIGR00815 235 HIPQGLSffPPITFTWQHLPTLAPDAIAIAIVGLTESILTARVFAAMTGYEIDANKELVALGIANIVGSFFSCYPATGSL 314
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 361 SRSLVQEGTGGKTQLAGCLASLMILLVILATGFLFESLPQAVLSAIVIVNLKGMFmQFSDLPFFWRTSKIELTIWLTTFV 440
Cdd:TIGR00815 315 SRTAVNYKAGCKTQLSAIVMAIVVLLVLLVLAPLFYYIPLAALAAIIISAAVGLI-DIRELYLLWKADKMDFVVWLGTFL 393
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 441 SSLFLGLDYGLITAVIIALLTVIYRTQSPSYKVLGQLPDTDVYIDIDAYEEVKEIPGIKIFQINAPIYYANSDLYSNALK 520
Cdd:TIGR00815 394 GVVFTSIEIGLLVGVSLSAFFFILRVARPRAAVLGRIPGTEDYENIEQYPKAQTPPGILIFRVDGPLYFANAEDLKERLL 473
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 521 RKTgvnpavimgarrkamkeyakevgnanvanatvvkVDAEVDGedatkpeqeddevkyppivikstfpeelqrfmppgd 600
Cdd:TIGR00815 474 KWL----------------------------------ETLELDP------------------------------------ 483
                         570       580       590       600       610       620       630
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1952697173 601 tiHTVILDFTQVNFIDSVGVKTLAGIVKEYGDVGIYVYLAGCSAQVVNDLTQNRFFENPAlKELLFHSIHDA 672
Cdd:TIGR00815 484 --QIIILDMSAVPFLDTSGIHALEELFKELKARGIQLLLANPNPAVISTLARAGFVELIG-EEHFFPSVHDA 552
Sulfate_transp pfam00916
Sulfate permease family; This family of integral membrane proteins are known as the Sulfate ...
81-438 8.89e-88

Sulfate permease family; This family of integral membrane proteins are known as the Sulfate Permease (SulP) family. SulP is a large family found in all domains of life. Although sulfate is a commonly transported ion there are many other activities in this family. See the TCDB description for a comprehensive summary.


Pssm-ID: 459995 [Multi-domain]  Cd Length: 379  Bit Score: 280.29  E-value: 8.89e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173  81 LGDLVSGISTGVLQLPQ-------------------------------------GPFAVISLMIGGVAVRLVPDDivipg 123
Cdd:pfam00916   2 KGDLIAGITVAILAIPQalayailaglppiyglyssfvpgfvyalfgtsrhlaiGPVAVLSLMVGAAIAKLAAKD----- 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 124 gvnatngtearDALRVKVAMSVTLLSGIIQFCLGVCRFGFVAIYLTEPLVRGFTTAAAVHVFTSMLKYLFGVKTK-RYSG 202
Cdd:pfam00916  77 -----------PELGIALAFTLTFLAGIIQLALGLLRLGFLVTFLSHAVISGFMGGAAIVILLSQLKVLLGLTNFsGPGY 145
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 203 IFSVVYStvaVLQNVKNLNVCSLGVGLMVFGLLLGGKEFNERFKEKLPAPIPLEFFAVVMGTGISAGFNLKESYNVDVVG 282
Cdd:pfam00916 146 VVSVLQS---LFTNLDKVNLATLVLGLLVLVILLFTKELGKKYKKLFWIPAPAPLVAVVLATLVSAIFDLLRRYGVKIVG 222
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 283 TLPLGLLPPANPDTSLFHL--VYVDAIAIAIVGFSVTISMAKTLANKHGYQVDGNQELIALGLCNSIGSLFQTFSISCSL 360
Cdd:pfam00916 223 EIPSGLPPFSLPKFSWSLLsaLLPDALAIAIVGLLEAIAISKSFAKKKGYEVDSNQELVALGFANILSGLFGGYPATGAF 302
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1952697173 361 SRSLVQEGTGGKTQLAGCLASLMILLVILATGFLFESLPQAVLSAIVIVNLKGMfMQFSDLPFFWRTSKIELTIWLTT 438
Cdd:pfam00916 303 SRSAVNIKAGAKTPLSGIIMAVIVLLVLLFLTPLFAYIPKAVLAAIIIVAGKGL-IDYRELKHLWRLSKLDFLIWLAT 379
SUL1 COG0659
Sulfate permease or related transporter, MFS superfamily [Inorganic ion transport and ...
77-673 1.14e-80

Sulfate permease or related transporter, MFS superfamily [Inorganic ion transport and metabolism];


Pssm-ID: 440424 [Multi-domain]  Cd Length: 529  Bit Score: 266.20  E-value: 1.14e-80
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173  77 KEYVLGDLVSGISTGVLQLPQG-PFAVIS----------LMIGGVAVRLV---------PDD--IVIPGGVNATNGTear 134
Cdd:COG0659     4 RSNLRGDLLAGLTVALVALPLAlAFAIAAglppeaglyaAIVGGIVYALFggsrllisgPTAalAVVVAAAVAPLGS--- 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 135 dalrVKVAMSVTLLSGIIQFCLGVCRFGFVAIYLTEPLVRGFTTAAAVHVFTSMLKYLFGVKTKRYSGIFSVVystvAVL 214
Cdd:COG0659    81 ----LALLLAATLLAGVLQLLLGLLRLGRLARFIPRPVIVGFLAGIAILIILGQLPHLLGLPAPGGSFLEKLA----ALL 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 215 QNVKNLNVCSLGVGLMVFGLLLGGKefneRFKEKLPAPIplefFAVVMGTGISAGFNLkesyNVDVVGTLPLGLLPPANP 294
Cdd:COG0659   153 AALGEINPPTLALGLLTLAILLLLP----RLLKRIPGPL----VAVVLGTLLVWLLGL----DVATVGEIPSGLPSFSLP 220
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 295 DTSLFHL--VYVDAIAIAIVGFSVTISMAKTLANKHGYQVDGNQELIALGLCNSIGSLFQTFSISCSLSRSLVQEGTGGK 372
Cdd:COG0659   221 DFSLETLraLLPPALTIALVGSIESLLTARAVDAMTGTRSDPNRELIAQGLANIASGLFGGLPVTGSISRSAVNVKAGAR 300
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 373 TQLAGCLASLMILLVILATGFLFESLPQAVLSAIVIVNLKGMFmQFSDLPFFWRTSKIELTIWLTTFVSSLFLGLDYGLI 452
Cdd:COG0659   301 TRLSGIVHALFLLLVLLFLAPLLAYIPLAALAAILIVVGIGLI-DWRSFRRLWRAPRSDFLVMLVTFLVTVFTDLLIGVL 379
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 453 TAVIIALLTVIYRTQSPSYKVLgQLPDTDvYIDIDAYEEVKEIPGIKIFQINAPIYYANSDlysnalkrktgvnpavimg 532
Cdd:COG0659   380 VGVLLSLLLFLRRVSRPHVVVL-RVPGTH-FRNVERHPEAETGPGVLVYRLDGPLFFGNAE------------------- 438
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 533 arrkamkeyakevgnanvanatvvkvdaevdgedatkpeqeddevkyppiviksTFPEELQRFMPPGDtihTVILDFTQV 612
Cdd:COG0659   439 ------------------------------------------------------RLKERLDALAPDPR---VVILDLSAV 461
                         570       580       590       600       610       620
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1952697173 613 NFIDSVGVKTLAGIVKEYGDVGIYVYLAGCSAQVVNDLTQNRFFENPAlKELLFHSIHDAV 673
Cdd:COG0659   462 PFIDATALEALEELAERLRARGITLELAGLKPPVRDLLERAGLLDELG-EERVFPDLDEAL 521
STAS_SulP_like_sulfate_transporter cd07042
Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, ...
489-657 5.19e-14

Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, plays a role in the function and regulation of the transport activity, proposed general NTP binding function; The SulP family is a large and diverse family of anion transporters, with members from eubacteria, plants, fungi, and mammals. They contain 10 to 14 transmembrane helices which form the catalytic core of the protein and a C-terminal extension, the STAS (Sulphate Transporter and AntiSigma factor antagonist) domain which plays a role in the function and regulation of the transport activity. The STAS domain is found in the C-terminal region of sulphate transporters and bacterial anti-sigma factor antagonists. It has been suggested that this domain may have a general NTP binding function.


Pssm-ID: 132913 [Multi-domain]  Cd Length: 107  Bit Score: 68.42  E-value: 5.19e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 489 YEEVKEIPGIKIFQINAPIYYANSDLYSNALKRKTGVNPavimgarrkamkeyakevgnanvanatvvkvdaevdgedat 568
Cdd:cd07042     1 YPLAEEPPGVLIYRIDGPLFFGNAEYFKDRLLRLVDEDP----------------------------------------- 39
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 569 kpeqeddevkyppivikstfpeelqrfmppgdTIHTVILDFTQVNFIDSVGVKTLAGIVKEYGDVGIYVYLAGCSAQVVN 648
Cdd:cd07042    40 --------------------------------PLKVVILDLSAVNFIDSTAAEALEELVKDLRKRGVELYLAGLNPQVRE 87

                  ....*....
gi 1952697173 649 DLTQNRFFE 657
Cdd:cd07042    88 LLERAGLLD 96
PRK11660 PRK11660
putative transporter; Provisional
146-531 1.01e-12

putative transporter; Provisional


Pssm-ID: 183265 [Multi-domain]  Cd Length: 568  Bit Score: 71.13  E-value: 1.01e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 146 TLLSGIIQFCLGVCRFGFVAIYLTEPLVRGFTTAAAVHVFTSMLKYLFGVKTKRYSGIFsvVYSTVAVLQNVKNLNVCSL 225
Cdd:PRK11660  109 TLMSGIILILMGLARLGRLIEYIPLSVTLGFTSGIGIVIATLQIKDFFGLQMAHVPEHY--LEKVGALFQALPTINWGDA 186
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 226 GVGLMVFGLLLggkeFNERFKEKLPAPIPleffAVVMGTGISAGFNLKEsYNVDVVGT------------------LPLG 287
Cdd:PRK11660  187 LIGIVTLGVLI----LWPRLKIRLPGHLP----ALLAGTAVMGVLNLLG-GHVATIGSrfhyvladgsqgngipplLPQF 257
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 288 LLPPANPDT---------SLFHLVYVDAIAIAIVGFSVTISMAKTLANKHGYQVDGNQELIALGLCNSIGSLFQTFSISC 358
Cdd:PRK11660  258 VLPWNLPGAdgqpftlswDLIRALLPAAFSMAMLGAIESLLCAVVLDGMTGTKHSANSELVGQGLGNIVAPFFGGITATA 337
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 359 SLSRSLVQEGTGGKTQLAGCLASLMILLVILATGFLFESLPQAVLSAIVIVNLKGMfmqfSDLPFFWRTSKI----ELTI 434
Cdd:PRK11660  338 AIARSAANVRAGATSPISAVIHALLVLLALLVLAPLLSYLPLSAMAALLLMVAWNM----SEAHKVVDLLRHapkdDIIV 413
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 435 WLTTFVSSLFLGLDYGLITAVIIALLTVIYRtqspsykvLGQLpdTDVYiDIDAYEevkEIPGIKIFQINAPIYYANSDL 514
Cdd:PRK11660  414 MLLCMSLTVLFDMVIAISVGIVLASLLFMRR--------IAEM--TRLA-PISVQD---VPDDVLVLRINGPLFFAAAER 479
                         410
                  ....*....|....*..
gi 1952697173 515 YSNALKRKTGVNPAVIM 531
Cdd:PRK11660  480 LFTELESRTEGKRIVVL 496
STAS pfam01740
STAS domain; The STAS (after Sulphate Transporter and AntiSigma factor antagonist) domain is ...
600-672 2.18e-08

STAS domain; The STAS (after Sulphate Transporter and AntiSigma factor antagonist) domain is found in the C terminal region of Sulphate transporters and bacterial antisigma factor antagonists. It has been suggested that this domain may have a general NTP binding function.


Pssm-ID: 426404 [Multi-domain]  Cd Length: 106  Bit Score: 52.62  E-value: 2.18e-08
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1952697173 600 DTIHTVILDFTQVNFIDSVGVKTLAGIVKEYGDVGIYVYLAGCSAQVVNDLTQNRFFEnpalKELLFHSIHDA 672
Cdd:pfam01740  38 GEIKHVVLDLSAVPFIDSSGLGALEELYKELRRRGVELVLVGPSPEVARTLEKTGLDD----IIKIFPTVAEA 106
STAS cd06844
Sulphate Transporter and Anti-Sigma factor antagonist domain found in the C-terminal region of ...
602-656 1.37e-05

Sulphate Transporter and Anti-Sigma factor antagonist domain found in the C-terminal region of sulphate transporters as well as in bacterial and archaeal proteins involved in the regulation of sigma factors; The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain is found in the C-terminal region of sulphate transporters as well as in bacterial and archaeal proteins involved in the regulation of sigma factors, like anti-anti-sigma factors and "stressosome" components. The sigma factor regulators are involved in protein-protein interaction which is regulated by phosphorylation.


Pssm-ID: 132911 [Multi-domain]  Cd Length: 100  Bit Score: 44.39  E-value: 1.37e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1952697173 602 IHTVILDFTQVNFIDSVGVKTLAGIVKEYGDVGIYVYLAGCSAQVVNDLTQNRFF 656
Cdd:cd06844    39 GKTIVIDISALEFMDSSGTGVLLERSRLAEAVGGQFVLTGISPAVRITLTESGLD 93
STAS_anti-anti-sigma_factors cd07043
Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key ...
552-646 2.31e-05

Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation; Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.


Pssm-ID: 132914 [Multi-domain]  Cd Length: 99  Bit Score: 43.66  E-value: 2.31e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 552 NATVVKVDAEVDGEDATKpeqeddevkyppivIKSTFPEELQrfmppgDTIHTVILDFTQVNFIDSVGVKTLAGIVKEYG 631
Cdd:cd07043     8 GVLVVRLSGELDAATAPE--------------LREALEELLA------EGPRRLVLDLSGVTFIDSSGLGVLLGAYKRAR 67
                          90
                  ....*....|....*
gi 1952697173 632 DVGIYVYLAGCSAQV 646
Cdd:cd07043    68 AAGGRLVLVNVSPAV 82
SpoIIAA COG1366
Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Signal transduction ...
552-646 4.29e-05

Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Signal transduction mechanisms];


Pssm-ID: 440977 [Multi-domain]  Cd Length: 93  Bit Score: 42.53  E-value: 4.29e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 552 NATVVKVDAEVDGEDAtkpeqeddevkyppivikSTFPEELQRFMPPGdtIHTVILDFTQVNFIDSVGVKTLAGIVKEYG 631
Cdd:COG1366     9 GVLVLPLIGELDAARA------------------PELREALLEALETG--ARRVVLDLSGVTFIDSSGLGALLSLAKAAR 68
                          90
                  ....*....|....*
gi 1952697173 632 DVGIYVYLAGCSAQV 646
Cdd:COG1366    69 LLGGRLVLVGVSPAV 83
ant_ant_sig TIGR00377
anti-anti-sigma factor; This superfamily includes small (105-125 residue) proteins related to ...
552-646 4.91e-03

anti-anti-sigma factor; This superfamily includes small (105-125 residue) proteins related to SpoIIAA of Bacillus subtilis, an anti-anti-sigma factor. SpoIIAA can bind to and inhibit the anti-sigma F factor SpoIIAB. Also, it can be phosphorylated by SpoIIAB on a Ser residue at position 59 of the seed alignment. A similar arrangement is inferred for RsbV, an anti-anti-sigma factor for sigma B. This Ser is fairly well conserved within a motif resembling MXS[STA]G[VIL]X[VIL][VILF] among homologous known or predicted anti-anti-sigma factors. Regions similar to SpoIIAA and apparently homologous, but differing considerably near the phosphorlated Ser of SpoIIAA, appear in a single copy in several longer proteins. [Regulatory functions, Protein interactions]


Pssm-ID: 273042 [Multi-domain]  Cd Length: 108  Bit Score: 37.20  E-value: 4.91e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952697173 552 NATVVKVDAEVDGEDAtkpeqeddevkyppivikstfpEELQRFMPP---GDTIHTVILDFTQVNFIDSVGVKTLAGIVK 628
Cdd:TIGR00377  12 GVVVVRLSGELDAHTA----------------------PLLREKVTPaaeRTGIRPIVLDLEDLEFMDSSGLGVLLGRYK 69
                          90
                  ....*....|....*...
gi 1952697173 629 EYGDVGIYVYLAGCSAQV 646
Cdd:TIGR00377  70 QVRRVGGQLVLVSVSPRV 87
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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