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Conserved domains on  [gi|1935032211|ref|XP_037744983|]
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dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X2 [Chelonia mydas]

Protein Classification

glycosyltransferase family protein( domain architecture ID 229536)

glycosyltransferase family protein may synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PMT_2 super family cl21590
Dolichyl-phosphate-mannose-protein mannosyltransferase; This family contains members that are ...
 35-357 2.16e-29

Dolichyl-phosphate-mannose-protein mannosyltransferase; This family contains members that are not captured by pfam02366.


The actual alignment was detected with superfamily member pfam03901:

Pssm-ID: 473917  Cd Length: 414  Bit Score: 119.39  E-value: 2.16e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935032211  35 KVEESFNLQAIHDIVYHRLDLEKYDHHEFPGVVPRTFLgpvfiAALSSPAIFVLSRLQMSKFYSQLIVRGSLGLSVIYAL 114
Cdd:pfam03901  21 DPDEHFQSWEPLHYLIFGYGFLTWEWSPKYGIRSYLYP-----LLFALPYYLLARLFGDSKYLVFYAPRLLLGLFSALCD 95

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935032211 115 WKLKKEVRKQFGSTVSTIFCLITVTQFHLMFYCTRTLPNMFALPVVLLALTSW--------IQQKHG-PFIWFSALAII- 184
Cdd:pfam03901  96 YYLYRAVCRKYGLEIARWALLLSLTSWGMFFASTRTLPNSFEMILTSIALYYLleygntsvSNYKYLkAVLLIAALAILg 175

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935032211 185 -VFRSELCIFLGLMLLVTLLSKRIS--ILKMLSHAVAAGVVWLGLTVAVDSVFWRQLLWPEGKVLWYNTVLNKSSNWGTS 261
Cdd:pfam03901 176 rPTSALLWLPLVLYLLLRLRGKRLKlfLFLAISLGLLVALLVLGAVILIDSYFYGRFVFTPLNFLKYNVLSNGSSFYGTH 255

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935032211 262 PFLWYFYSALPRALGCSIIFVPLGAADKRTR------VLILPTLGFIFLYSFLPHKELRFIIYTFPVFNIVAAKGCTRIL 335
Cdd:pfam03901 256 PWYFYFSNGLPNILGPFLLAFILGPLVLLLRkvsrlsQLLAPILIWLFIYSLQPHKEERFLYPVYPLILLSAAIALTRLS 335

                         330       340
                  ....*....|....*....|...
gi 1935032211 336 HNY-KKSWLYKLGSLLVMTHLLI 357
Cdd:pfam03901 336 RRSwKVRKKLSLLFLLLFFNVSL 358
 
Name Accession Description Interval E-value
Glyco_transf_22 pfam03901
Alg9-like mannosyltransferase family; Members of this family are mannosyltransferase enzymes. ...
 35-357 2.16e-29

Alg9-like mannosyltransferase family; Members of this family are mannosyltransferase enzymes. At least some members are localized in endoplasmic reticulum and involved in GPI anchor biosynthesis.


Pssm-ID: 281842  Cd Length: 414  Bit Score: 119.39  E-value: 2.16e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935032211  35 KVEESFNLQAIHDIVYHRLDLEKYDHHEFPGVVPRTFLgpvfiAALSSPAIFVLSRLQMSKFYSQLIVRGSLGLSVIYAL 114
Cdd:pfam03901  21 DPDEHFQSWEPLHYLIFGYGFLTWEWSPKYGIRSYLYP-----LLFALPYYLLARLFGDSKYLVFYAPRLLLGLFSALCD 95

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935032211 115 WKLKKEVRKQFGSTVSTIFCLITVTQFHLMFYCTRTLPNMFALPVVLLALTSW--------IQQKHG-PFIWFSALAII- 184
Cdd:pfam03901  96 YYLYRAVCRKYGLEIARWALLLSLTSWGMFFASTRTLPNSFEMILTSIALYYLleygntsvSNYKYLkAVLLIAALAILg 175

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935032211 185 -VFRSELCIFLGLMLLVTLLSKRIS--ILKMLSHAVAAGVVWLGLTVAVDSVFWRQLLWPEGKVLWYNTVLNKSSNWGTS 261
Cdd:pfam03901 176 rPTSALLWLPLVLYLLLRLRGKRLKlfLFLAISLGLLVALLVLGAVILIDSYFYGRFVFTPLNFLKYNVLSNGSSFYGTH 255

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935032211 262 PFLWYFYSALPRALGCSIIFVPLGAADKRTR------VLILPTLGFIFLYSFLPHKELRFIIYTFPVFNIVAAKGCTRIL 335
Cdd:pfam03901 256 PWYFYFSNGLPNILGPFLLAFILGPLVLLLRkvsrlsQLLAPILIWLFIYSLQPHKEERFLYPVYPLILLSAAIALTRLS 335

                         330       340
                  ....*....|....*....|...
gi 1935032211 336 HNY-KKSWLYKLGSLLVMTHLLI 357
Cdd:pfam03901 336 RRSwKVRKKLSLLFLLLFFNVSL 358
PLN02816 PLN02816
mannosyltransferase
 125-322 8.32e-03

mannosyltransferase


Pssm-ID: 215437  Cd Length: 546  Bit Score: 38.86  E-value: 8.32e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935032211 125 FGSTVSTIFCLITVTQFHLMFYCTRTLPNMFALPVVLLALTSW-----------IQQKHGPFIwfSALAIIVFRSELCIF 193
Cdd:PLN02816  144 YGGNVATWSLFCQMANWFIFFCLNRTFSNCLETVLTIMGLYYWpcirdssidypVNRKWGLVI--AALACAIRPTSAVIW 221

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935032211 194 LGLMLLVTLLSKRISILKMLsHAVAAGVVWLGLTVAVDSVFWRQLLWPEGKVLWYNTVLNKSSNWGTSPFLWYFYSALPR 273
Cdd:PLN02816  222 LYVGMLELFLTPNKVKFIIL-EVIPIGSLVLGFTCLLDRLMYGSWVIVPLNFLKFNFLSSGGDYYGTHPWHWYFTQGFLV 300

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 1935032211 274 ALGCSIIFVPLGAADKRTRVLILPTLGFIFLYSFLPHKELRFIIYTFPV 322
Cdd:PLN02816  301 MLFTFTPFSIAGIIKSKNQKLSALILWVLAIYSILGHKEFRFVLPVLPI 349
 
Name Accession Description Interval E-value
Glyco_transf_22 pfam03901
Alg9-like mannosyltransferase family; Members of this family are mannosyltransferase enzymes. ...
 35-357 2.16e-29

Alg9-like mannosyltransferase family; Members of this family are mannosyltransferase enzymes. At least some members are localized in endoplasmic reticulum and involved in GPI anchor biosynthesis.


Pssm-ID: 281842  Cd Length: 414  Bit Score: 119.39  E-value: 2.16e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935032211  35 KVEESFNLQAIHDIVYHRLDLEKYDHHEFPGVVPRTFLgpvfiAALSSPAIFVLSRLQMSKFYSQLIVRGSLGLSVIYAL 114
Cdd:pfam03901  21 DPDEHFQSWEPLHYLIFGYGFLTWEWSPKYGIRSYLYP-----LLFALPYYLLARLFGDSKYLVFYAPRLLLGLFSALCD 95

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935032211 115 WKLKKEVRKQFGSTVSTIFCLITVTQFHLMFYCTRTLPNMFALPVVLLALTSW--------IQQKHG-PFIWFSALAII- 184
Cdd:pfam03901  96 YYLYRAVCRKYGLEIARWALLLSLTSWGMFFASTRTLPNSFEMILTSIALYYLleygntsvSNYKYLkAVLLIAALAILg 175

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935032211 185 -VFRSELCIFLGLMLLVTLLSKRIS--ILKMLSHAVAAGVVWLGLTVAVDSVFWRQLLWPEGKVLWYNTVLNKSSNWGTS 261
Cdd:pfam03901 176 rPTSALLWLPLVLYLLLRLRGKRLKlfLFLAISLGLLVALLVLGAVILIDSYFYGRFVFTPLNFLKYNVLSNGSSFYGTH 255

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935032211 262 PFLWYFYSALPRALGCSIIFVPLGAADKRTR------VLILPTLGFIFLYSFLPHKELRFIIYTFPVFNIVAAKGCTRIL 335
Cdd:pfam03901 256 PWYFYFSNGLPNILGPFLLAFILGPLVLLLRkvsrlsQLLAPILIWLFIYSLQPHKEERFLYPVYPLILLSAAIALTRLS 335

                         330       340
                  ....*....|....*....|...
gi 1935032211 336 HNY-KKSWLYKLGSLLVMTHLLI 357
Cdd:pfam03901 336 RRSwKVRKKLSLLFLLLFFNVSL 358
PLN02816 PLN02816
mannosyltransferase
 125-322 8.32e-03

mannosyltransferase


Pssm-ID: 215437  Cd Length: 546  Bit Score: 38.86  E-value: 8.32e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935032211 125 FGSTVSTIFCLITVTQFHLMFYCTRTLPNMFALPVVLLALTSW-----------IQQKHGPFIwfSALAIIVFRSELCIF 193
Cdd:PLN02816  144 YGGNVATWSLFCQMANWFIFFCLNRTFSNCLETVLTIMGLYYWpcirdssidypVNRKWGLVI--AALACAIRPTSAVIW 221

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935032211 194 LGLMLLVTLLSKRISILKMLsHAVAAGVVWLGLTVAVDSVFWRQLLWPEGKVLWYNTVLNKSSNWGTSPFLWYFYSALPR 273
Cdd:PLN02816  222 LYVGMLELFLTPNKVKFIIL-EVIPIGSLVLGFTCLLDRLMYGSWVIVPLNFLKFNFLSSGGDYYGTHPWHWYFTQGFLV 300

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 1935032211 274 ALGCSIIFVPLGAADKRTRVLILPTLGFIFLYSFLPHKELRFIIYTFPV 322
Cdd:PLN02816  301 MLFTFTPFSIAGIIKSKNQKLSALILWVLAIYSILGHKEFRFVLPVLPI 349
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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