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Conserved domains on  [gi|1907132910|ref|XP_036017597|]
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heat shock 70 kDa protein 12A isoform X4 [Mus musculus]

Protein Classification

acetate and sugar kinases/Hsc70/actin family protein( domain architecture ID 99298)

acetate and sugar kinases/Hsc70/actin (ASKHA) family protein catalyzes phosphoryl transfer from ATP to their respective substrates

CATH:  3.30.420.40
Gene Ontology:  GO:0000166
PubMed:  8800467|7781919
SCOP:  3000092

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
ASKHA_ATPase-like super family cl49607
ATPase-like domain of the ASKHA (Acetate and Sugar Kinases/Hsc70/Actin) superfamily; The ASKHA ...
50-268 3.81e-171

ATPase-like domain of the ASKHA (Acetate and Sugar Kinases/Hsc70/Actin) superfamily; The ASKHA superfamily, also known as actin-like ATPase domain superfamily, includes acetate and sugar kinases, heat-shock cognate 70 (Hsp70) and actin family proteins. They either function as conformational hydrolases (e.g. Hsp70, actin) that perform simple ATP hydrolysis, or as metabolite kinases (e.g. glycerol kinase) that catalyze the transfer of a phosphoryl group from ATP to their cognate substrates. Both activities depend on the presence of specific metal cations. ASKHA superfamily members share a common core fold that includes an actin-like ATPase domain consisting of two subdomains (denoted I _ II) with highly similar ribonuclease (RNase) H-like folds. The fold of each subdomain is characterized by a central five strand beta-sheet and flanking alpha-helices. The two subdomains form an active site cleft in which ATP binds at the bottom. Another common feature of ASKHA superfamily members is the coupling of phosphoryl-group transfer to conformational rearrangement, leading to domain closure. Substrate binding triggers protein motion.


The actual alignment was detected with superfamily member cd11735:

Pssm-ID: 483947 [Multi-domain]  Cd Length: 413  Bit Score: 485.28  E-value: 3.81e-171
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907132910  50 LEEGDKYVVVDSGGGTVDLTVHQIRLPEGHLKELYKATGGPYGSLGVDYEFEKLLCKIFGEDFIEQFKIKRPAAWVDLMI 129
Cdd:cd11735   195 LHQMDRYVVVDCGGGTVDLTVHQIRLPEGHLKELYKASGGPYGSLGVDYEFEKLLCKIFGEDFIDQFKIKRPAAWVDLMI 274
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907132910 130 AFESRKRAAAPDRTNPLNITLPFSFIDYYKKFRGHSVEHALRKSNVDFVKWSSQGMLRMSPDAMNALFKPTIDSIIEHLR 209
Cdd:cd11735   275 AFESRKRAAAPDRTNPLNITLPFSFIDYYKKFRGHSVEHALRKSNVDFVKWSSQGMLRMSPDAMNALFKPTIDHIIQHLT 354
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1907132910 210 DLFQKPEVSTVKFLFLVGGFAEAPLLQQAVQTAFGDKCRIIIPQDVGLTILKGAVLFGL 268
Cdd:cd11735   355 DLFQKPEVSGVKFLFLVGGFAESPLLQQAVQNAFGDQCRVIIPHDVGLTILKGAVLFGL 413
 
Name Accession Description Interval E-value
ASKHA_NBD_HSP70_HSPA12A cd11735
nucleotide-binding domain (NBD) of heat shock 70 kDa protein 12A (HSPA12A) and similar ...
50-268 3.81e-171

nucleotide-binding domain (NBD) of heat shock 70 kDa protein 12A (HSPA12A) and similar proteins; HSPA12A is an adapter protein for SORL1, but not SORT1. It delays SORL1 internalization and affects SORL1 subcellular localization. HSPA12A belongs to the heat shock protein 70 (HSP70) family of chaperones that assist in protein folding and assembly, and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. HSP70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). No co-chaperones have yet been identified for HSPA12A.


Pssm-ID: 466841 [Multi-domain]  Cd Length: 413  Bit Score: 485.28  E-value: 3.81e-171
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907132910  50 LEEGDKYVVVDSGGGTVDLTVHQIRLPEGHLKELYKATGGPYGSLGVDYEFEKLLCKIFGEDFIEQFKIKRPAAWVDLMI 129
Cdd:cd11735   195 LHQMDRYVVVDCGGGTVDLTVHQIRLPEGHLKELYKASGGPYGSLGVDYEFEKLLCKIFGEDFIDQFKIKRPAAWVDLMI 274
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907132910 130 AFESRKRAAAPDRTNPLNITLPFSFIDYYKKFRGHSVEHALRKSNVDFVKWSSQGMLRMSPDAMNALFKPTIDSIIEHLR 209
Cdd:cd11735   275 AFESRKRAAAPDRTNPLNITLPFSFIDYYKKFRGHSVEHALRKSNVDFVKWSSQGMLRMSPDAMNALFKPTIDHIIQHLT 354
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1907132910 210 DLFQKPEVSTVKFLFLVGGFAEAPLLQQAVQTAFGDKCRIIIPQDVGLTILKGAVLFGL 268
Cdd:cd11735   355 DLFQKPEVSGVKFLFLVGGFAESPLLQQAVQNAFGDQCRVIIPHDVGLTILKGAVLFGL 413
DnaK COG0443
Molecular chaperone DnaK (HSP70) [Posttranslational modification, protein turnover, chaperones] ...
51-416 3.03e-08

Molecular chaperone DnaK (HSP70) [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440212 [Multi-domain]  Cd Length: 473  Bit Score: 55.60  E-value: 3.03e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907132910  51 EEGDKYVVVDSGGGTVDLTVhqIRLPEGHLKELykATGGpYGSLG--------VDYeFEKLLCKIFGEDFIEQfkikrPA 122
Cdd:COG0443   161 KEEETILVYDLGGGTFDVSI--LRLGDGVFEVL--ATGG-DTHLGgddfdqalADY-VAPEFGKEEGIDLRLD-----PA 229
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907132910 123 AWVDLMIAFESRKRA-AAPDRTNplnITLPFSfidyykkfRGHSVEHALRKSnvDFvkwssqgmlrmspdamNALFKPTI 201
Cdd:COG0443   230 ALQRLREAAEKAKIElSSADEAE---INLPFS--------GGKHLDVELTRA--EF----------------EELIAPLV 280
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907132910 202 DSIIEHLRDLFQKPEVST--VKFLFLVGGFAEAPLLQQAVQTAFGDKCRIIIPQD----VGLTILkGAVLFGL--DPAVI 273
Cdd:COG0443   281 ERTLDPVRQALADAGLSPsdIDAVLLVGGSTRMPAVRERVKELFGKEPLKGVDPDeavaLGAAIQ-AGVLAGDvkDLDVT 359
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907132910 274 kvrrsPLTYGVGVLNryvegkhppekllvkdgtrwctDVFDKFISADQSVAlgelVKRS--YTPAKPSQLVIIINIYSSE 351
Cdd:COG0443   360 -----PLSLGIETLG----------------------GVFTKLIPRNTTIP----TAKSqvFSTAADNQTAVEIHVLQGE 408
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907132910 352 hdnvsfitDPGVKKCGTL-RLDLTGSGgtavPARREIQTI-MQFGDTE---IKATAVDITTSKSVKVGID 416
Cdd:COG0443   409 --------RELAADNRSLgRFELTGIP----PAPRGVPQIeVTFDIDAngiLSVSAKDLGTGKEQSITIK 466
 
Name Accession Description Interval E-value
ASKHA_NBD_HSP70_HSPA12A cd11735
nucleotide-binding domain (NBD) of heat shock 70 kDa protein 12A (HSPA12A) and similar ...
50-268 3.81e-171

nucleotide-binding domain (NBD) of heat shock 70 kDa protein 12A (HSPA12A) and similar proteins; HSPA12A is an adapter protein for SORL1, but not SORT1. It delays SORL1 internalization and affects SORL1 subcellular localization. HSPA12A belongs to the heat shock protein 70 (HSP70) family of chaperones that assist in protein folding and assembly, and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. HSP70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). No co-chaperones have yet been identified for HSPA12A.


Pssm-ID: 466841 [Multi-domain]  Cd Length: 413  Bit Score: 485.28  E-value: 3.81e-171
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907132910  50 LEEGDKYVVVDSGGGTVDLTVHQIRLPEGHLKELYKATGGPYGSLGVDYEFEKLLCKIFGEDFIEQFKIKRPAAWVDLMI 129
Cdd:cd11735   195 LHQMDRYVVVDCGGGTVDLTVHQIRLPEGHLKELYKASGGPYGSLGVDYEFEKLLCKIFGEDFIDQFKIKRPAAWVDLMI 274
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907132910 130 AFESRKRAAAPDRTNPLNITLPFSFIDYYKKFRGHSVEHALRKSNVDFVKWSSQGMLRMSPDAMNALFKPTIDSIIEHLR 209
Cdd:cd11735   275 AFESRKRAAAPDRTNPLNITLPFSFIDYYKKFRGHSVEHALRKSNVDFVKWSSQGMLRMSPDAMNALFKPTIDHIIQHLT 354
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1907132910 210 DLFQKPEVSTVKFLFLVGGFAEAPLLQQAVQTAFGDKCRIIIPQDVGLTILKGAVLFGL 268
Cdd:cd11735   355 DLFQKPEVSGVKFLFLVGGFAESPLLQQAVQNAFGDQCRVIIPHDVGLTILKGAVLFGL 413
ASKHA_NBD_HSP70_HSPA12B cd11736
nucleotide-binding domain (NBD) of heat shock 70 kDa protein 12B (HSPA12B) and similar ...
54-267 5.78e-94

nucleotide-binding domain (NBD) of heat shock 70 kDa protein 12B (HSPA12B) and similar proteins; HSPA12B, predominantly expressed in endothelial cells, is required for angiogenesis, and may interact with known angiogenesis mediators. It may be important for host defense in microglia-mediated immune response. HSPA12B belongs to the heat shock protein 70 (HSP70) family of chaperones that assist in protein folding and assembly, and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. HSP70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). No co-chaperones have yet been identified for HSPA12B.


Pssm-ID: 466842 [Multi-domain]  Cd Length: 361  Bit Score: 286.86  E-value: 5.78e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907132910  54 DKYVVVDSGGGTVDLTVHQIRLPEGHLKELYKATGGPYGSLGVDYEFEKLLCKIFGEDFIEQFKIKRPAAWVDLMIAFES 133
Cdd:cd11736   194 DRYIVADCGGGTVDLTVHQIEQPQGTLKELYKASGGPYGAVGVDLAFEKLLCQIFGEDFIATFKAKRPAAWVDLTIAFEA 273
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907132910 134 RKRAAApdrtnplnitlpfsfidyykkfrghsvehalrksnvdfvkwssqgmLRMSPDAMNALFKPTIDSIIEHLRDLFQ 213
Cdd:cd11736   274 RKRTAA----------------------------------------------LRMSSEAMNELFQPTISQIIQHIDDLMK 307
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1907132910 214 KPEVSTVKFLFLVGGFAEAPLLQQAVQTAFGDKCRIIIPQDVGLTILKGAVLFG 267
Cdd:cd11736   308 KPEVKGIKFLFLVGGFAESPMLQRAVQAAFGNICRVIIPQDVGLTILKGAVLFG 361
ASKHA_NBD_HSP70_HSPA12 cd10229
nucleotide-binding domain (NBD) of heat shock 70 kDa proteins HSPA12A, HSPA12B and similar ...
45-267 1.35e-75

nucleotide-binding domain (NBD) of heat shock 70 kDa proteins HSPA12A, HSPA12B and similar proteins; The family includes heat shock 70 kDa proteins HSPA12A and HSPA12B. HSPA12A is an adapter protein for SORL1, but not SORT1. It delays SORL1 internalization and affects SORL1 subcellular localization. HSPA12B, predominantly expressed in endothelial cells, is required for angiogenesis, and may interact with known angiogenesis mediators. It may be important for host defense in microglia-mediated immune response. Both HSPA12A and HSPA12B belong to the heat shock protein 70 (HSP70) family of chaperones that assist in protein folding and assembly, and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. HSP70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). No co-chaperones have yet been identified for HSPA12A and HSPA12B.


Pssm-ID: 466827 [Multi-domain]  Cd Length: 372  Bit Score: 239.87  E-value: 1.35e-75
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907132910  45 EIWSELEEGDKYVVVDSGGGTVDLTVHQIrLPEGHLKELYKATGGPYGSLGVDYEFEKLLCKIFGEDFIEQFKIKRPAAW 124
Cdd:cd10229   197 GEEKELKPGDKYLVVDCGGGTVDITVHEV-LEDGKLEELLKASGGPWGSTSVDEEFEELLEEIFGDDFMEAFKQKYPSDY 275
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907132910 125 VDLMIAFESRKRAAapdrtnplnitlpfsfidyykkfrghsvehalrksnvdfvkwssqgMLRMSPDAMNALFKPTIDSI 204
Cdd:cd10229   276 LDLLQAFERKKRSF----------------------------------------------KLRLSPELMKSLFDPVVKKI 309
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1907132910 205 IEHLRDLFQKPEVSTVKFLFLVGGFAEAPLLQQAVQTAFGDKCRIIIPQDVGLTILKGAVLFG 267
Cdd:cd10229   310 IEHIKELLEKPELKGVDYIFLVGGFAESPYLQKAVKEAFSTKVKIIIPPEPGLAVVKGAVLFG 372
ASKHA_NBD_HSP70 cd10170
nucleotide-binding domain (NBD) of the HSP70 family; HSP70 (70-kDa heat shock protein) family ...
44-265 2.50e-33

nucleotide-binding domain (NBD) of the HSP70 family; HSP70 (70-kDa heat shock protein) family chaperones assist in protein folding and assembly and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. HSP70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). Some HSP70 family members are not chaperones but instead, function as NEFs to remove ADP from their HSP70 chaperone partners during the ATP hydrolysis cycle, some may function as both chaperones and NEFs. The HSP70 family belongs to the ASKHA (Acetate and Sugar Kinases/Hsc70/Actin) superfamily, all members of which share a common characteristic five-stranded beta sheet occurring in both the N- and C-terminal domains.


Pssm-ID: 466811 [Multi-domain]  Cd Length: 329  Bit Score: 127.61  E-value: 2.50e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907132910  44 GEIWSELEEGDKYVVVDSGGGTVDLTVHQIRLPEG-HLKELYKATGGPYGSLGVDYEFEKLLCKIFGEDFIEQfKIKRPA 122
Cdd:cd10170   126 KGDLLPLKPGDVVLVCDAGGGTVDLSLYEVTSGSPlLLEEVAPGGGALLGGTDIDEAFEKLLREKLGDKGKDL-GRSDAD 204
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907132910 123 AWVDLMIAFESRKRAAAPDRTNPLNITLPFSFIDYYKKFRghsvehalrksnvdfvkwssQGMLRMSPDAMNALFKPTID 202
Cdd:cd10170   205 ALAKLLREFEEAKKRFSGGEEDERLVPSLLGGGLPELGLE--------------------KGTLLLTEEEIRDLFDPVID 264
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1907132910 203 SIIEHLRDLFQKPEVSTVKFLFLVGGFAEAPLLQQAVQTAFGDKCRIII--PQDVGLTILKGAVL 265
Cdd:cd10170   265 KILELIEEQLEAKSGTPPDAVVLVGGFSRSPYLRERLRERFGSAGIIIVlrSDDPDTAVARGAAL 329
ASKHA_NBD_HSP70_DnaK_HscA_HscC cd24029
nucleotide-binding domain (NBD) of Escherichia coli chaperone proteins DnaK, HscA, HscC and ...
47-267 6.70e-13

nucleotide-binding domain (NBD) of Escherichia coli chaperone proteins DnaK, HscA, HscC and similar proteins; Escherichia coli DnaK, also called heat shock 70 kDa protein/HSP70, plays an essential role in the initiation of phage lambda DNA replication, where it acts in an ATP-dependent fashion with the DnaJ protein to release lambda O and P proteins from the preprimosomal complex. DnaK is also involved in chromosomal DNA replication, possibly through an analogous interaction with the DnaA protein. Moreover, DnaK participates actively in the response to hyperosmotic shock. Escherichia coli HscA, also called Hsc66, acts as a chaperone involved in the maturation of iron-sulfur cluster-containing proteins. It has a low intrinsic ATPase activity which is markedly stimulated by HscB. It is involved in the maturation of IscU. Escherichia coli HscC, also called Hsc62, or YbeW, may act as the chaperone. It has ATPase activity. It cannot be stimulated by DnaJ. The family also includes Saccharomyces cerevisiae stress-seventy subfamily C proteins, Ssc1p (also called import motor subunit, mitochondrial; endonuclease SceI 75 kDa subunit; mtHSP70; ENS1; endonuclease SceI 75 kDa subunit) and Ssc3p (also called extracellular mutant protein 10/Ecm10), and Saccharomyces cerevisiae Stress-seventy subfamily Q protein 1/Ssq1p (also called Ssc2p; Ssh1p; mtHSP70 homolog). They all belong to the heat shock protein 70 (HSP70) family of chaperones that assist in protein folding and assembly, and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. Hsp70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs); for Escherichia coli DnaK, these are the DnaJ and GrpE, respectively.


Pssm-ID: 466879 [Multi-domain]  Cd Length: 351  Bit Score: 69.53  E-value: 6.70e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907132910  47 WSELEEGDKYVVVDSGGGTVDLTVhqIRLPEGHLKELykATGGpYGSLG---VDYEFEKLLCKIFGEDFIEQFKIKRPAA 123
Cdd:cd24029   156 LDKEGKDGTILVYDLGGGTFDVSI--LEIENGKFEVL--ATGG-DNFLGgddFDEAIAELILEKIGIETGILDDKEDERA 230
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907132910 124 WVDLMIAFESRK-RAAAPDRTnplNITLPFSFIDYYkkfrghsVEHALRKSnvDFVKwssqgmlrmspdamnaLFKPTID 202
Cdd:cd24029   231 RARLREAAEEAKiELSSSDST---DILILDDGKGGE-------LEIEITRE--EFEE----------------LIAPLIE 282
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907132910 203 SIIEHLRDLFQKPEVST--VKFLFLVGGFAEAPLLQQAVQTAFGDKcrIIIPQDVGLTILKGAVLFG 267
Cdd:cd24029   283 RTIDLLEKALKDAKLSPedIDRVLLVGGSSRIPLVREMLEEYFGRE--PISSVDPDEAVAKGAAIYA 347
DnaK COG0443
Molecular chaperone DnaK (HSP70) [Posttranslational modification, protein turnover, chaperones] ...
51-416 3.03e-08

Molecular chaperone DnaK (HSP70) [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440212 [Multi-domain]  Cd Length: 473  Bit Score: 55.60  E-value: 3.03e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907132910  51 EEGDKYVVVDSGGGTVDLTVhqIRLPEGHLKELykATGGpYGSLG--------VDYeFEKLLCKIFGEDFIEQfkikrPA 122
Cdd:COG0443   161 KEEETILVYDLGGGTFDVSI--LRLGDGVFEVL--ATGG-DTHLGgddfdqalADY-VAPEFGKEEGIDLRLD-----PA 229
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907132910 123 AWVDLMIAFESRKRA-AAPDRTNplnITLPFSfidyykkfRGHSVEHALRKSnvDFvkwssqgmlrmspdamNALFKPTI 201
Cdd:COG0443   230 ALQRLREAAEKAKIElSSADEAE---INLPFS--------GGKHLDVELTRA--EF----------------EELIAPLV 280
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907132910 202 DSIIEHLRDLFQKPEVST--VKFLFLVGGFAEAPLLQQAVQTAFGDKCRIIIPQD----VGLTILkGAVLFGL--DPAVI 273
Cdd:COG0443   281 ERTLDPVRQALADAGLSPsdIDAVLLVGGSTRMPAVRERVKELFGKEPLKGVDPDeavaLGAAIQ-AGVLAGDvkDLDVT 359
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907132910 274 kvrrsPLTYGVGVLNryvegkhppekllvkdgtrwctDVFDKFISADQSVAlgelVKRS--YTPAKPSQLVIIINIYSSE 351
Cdd:COG0443   360 -----PLSLGIETLG----------------------GVFTKLIPRNTTIP----TAKSqvFSTAADNQTAVEIHVLQGE 408
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907132910 352 hdnvsfitDPGVKKCGTL-RLDLTGSGgtavPARREIQTI-MQFGDTE---IKATAVDITTSKSVKVGID 416
Cdd:COG0443   409 --------RELAADNRSLgRFELTGIP----PAPRGVPQIeVTFDIDAngiLSVSAKDLGTGKEQSITIK 466
ASKHA_NBD_HSP70_ScSse cd24094
nucleotide-binding domain (NBD) of Saccharomyces cerevisiae heat shock protein homolog Sse and ...
99-276 1.72e-04

nucleotide-binding domain (NBD) of Saccharomyces cerevisiae heat shock protein homolog Sse and similar proteins; The subgroup includes two Saccharomyces cerevisiae heat shock protein homologs, Sse1 and Sse2. They may have calcium-dependent calmodulin-binding activities. Both Sse1 and Sse2 belong to the 105/110 kDa heat shock protein (HSP105/110) subfamily of the HSP70-like family, and includes proteins believed to function generally as co-chaperones of HSP70 chaperones, acting as nucleotide exchange factors (NEFs), to remove ADP from their HSP70 chaperone partners during the ATP hydrolysis cycle. HSP70 chaperones assist in protein folding and assembly, and can direct incompetent "client" proteins towards degradation. Like HSP70 chaperones, HSP105/110s have an N-terminal nucleotide-binding domain (NBD) and a C-terminal substrate-binding domain (SBD). For HSP70 chaperones, the nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. Hsp70 chaperone activity is also regulated by J-domain proteins.


Pssm-ID: 466944 [Multi-domain]  Cd Length: 385  Bit Score: 43.52  E-value: 1.72e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907132910  99 EFEKLLCKIFGEDFIEQFKI---KRPAAWVDLMIAFESRKRAAAPDRTNPLNITLPFSFIDyykkfrghsVEHALRKSnv 175
Cdd:cd24094   231 DFDKALTDHFADEFKEKYKIdvrSNPKAYFRLLAAAEKLKKVLSANAQAPLNVESLMNDID---------VSSMLKRE-- 299
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907132910 176 DFVKWSSQGMLRMSPDAMNALFKPTIDsiiehlrdlfqKPEVSTVKflfLVGGFAEAPLLQQAVQTAFGDKCRIIIPQDV 255
Cdd:cd24094   300 EFEELIAPLLERVTAPLEKALAQAGLT-----------KDEIDFVE---LVGGTTRVPALKESISAFFGKPLSTTLNQDE 365
                         170       180
                  ....*....|....*....|...
gi 1907132910 256 GltILKGAVLF--GLDPaVIKVR 276
Cdd:cd24094   366 A--VARGAAFAcaILSP-VFRVR 385
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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