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Conserved domains on  [gi|1907080114|ref|XP_036012239|]
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insulin-like growth factor-binding protein 4 isoform X1 [Mus musculus]

Protein Classification

insulin-like growth factor-binding protein( domain architecture ID 11254546)

insulin-like growth factor-binding protein (IGFBP) controls the bioavailability, activity, and distribution of insulin-like growth factor (IGF) through high-affinity IGFBP/IGF complexes

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
IB smart00121
Insulin growth factor-binding protein homologues; High affinity binding partners of ...
 25-101 1.31e-26

Insulin growth factor-binding protein homologues; High affinity binding partners of insulin-like growth factors.


:

Pssm-ID: 197525  Cd Length: 75  Bit Score: 98.31  E-value: 1.31e-26
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907080114   25 IHCPPCSEEKLARCrpPVGCEELVREPGCGCCATCALGLGMPCGVYTPRCGSGMRCYPPRGVEKPLRTLMHGQGVCT 101
Cdd:smart00121   1 ARCPPCDPARCPPC--PPGCAELVRLDGCGCCPVCARQEGEPCGVYTPRCAPGLRCQPPPGEERPLRALLHGQGVCM 75
Thyroglobulin_1 pfam00086
Thyroglobulin type-1 repeat; Thyroglobulin type 1 repeats are thought to be involved in the ...
 170-245 2.97e-17

Thyroglobulin type-1 repeat; Thyroglobulin type 1 repeats are thought to be involved in the control of proteolytic degradation. The domain usually contains six conserved cysteines. These form three disulphide bridges. Cysteines 1 pairs with 2, 3 with 4 and 5 with 6.


:

Pssm-ID: 459665  Cd Length: 66  Bit Score: 73.49  E-value: 2.97e-17
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907080114 170 CQSELHRALERLAASQSrtHEDLFIipiPNCDRNGNFHPKQCHpaldGQRGKCWCVDRKtGVKLPGGLEPKGELDC 245
Cdd:pfam00086   1 CERERARALEQAASGRP--ASGLYI---PNCDEDGFYKPVQCH----GSTGYCWCVDPE-GQEIPGTRTRGGDPDC 66
 
Name Accession Description Interval E-value
IB smart00121
Insulin growth factor-binding protein homologues; High affinity binding partners of ...
 25-101 1.31e-26

Insulin growth factor-binding protein homologues; High affinity binding partners of insulin-like growth factors.


Pssm-ID: 197525  Cd Length: 75  Bit Score: 98.31  E-value: 1.31e-26
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907080114   25 IHCPPCSEEKLARCrpPVGCEELVREPGCGCCATCALGLGMPCGVYTPRCGSGMRCYPPRGVEKPLRTLMHGQGVCT 101
Cdd:smart00121   1 ARCPPCDPARCPPC--PPGCAELVRLDGCGCCPVCARQEGEPCGVYTPRCAPGLRCQPPPGEERPLRALLHGQGVCM 75
Thyroglobulin_1 pfam00086
Thyroglobulin type-1 repeat; Thyroglobulin type 1 repeats are thought to be involved in the ...
 170-245 2.97e-17

Thyroglobulin type-1 repeat; Thyroglobulin type 1 repeats are thought to be involved in the control of proteolytic degradation. The domain usually contains six conserved cysteines. These form three disulphide bridges. Cysteines 1 pairs with 2, 3 with 4 and 5 with 6.


Pssm-ID: 459665  Cd Length: 66  Bit Score: 73.49  E-value: 2.97e-17
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907080114 170 CQSELHRALERLAASQSrtHEDLFIipiPNCDRNGNFHPKQCHpaldGQRGKCWCVDRKtGVKLPGGLEPKGELDC 245
Cdd:pfam00086   1 CERERARALEQAASGRP--ASGLYI---PNCDEDGFYKPVQCH----GSTGYCWCVDPE-GQEIPGTRTRGGDPDC 66
TY cd00191
Thyroglobulin type I repeats.; The N-terminal region of human thyroglobulin contains 11 type-1 ...
 169-245 4.92e-14

Thyroglobulin type I repeats.; The N-terminal region of human thyroglobulin contains 11 type-1 repeats TY repeats are proposed to be inhibitors of cysteine proteases


Pssm-ID: 238114  Cd Length: 66  Bit Score: 65.18  E-value: 4.92e-14
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907080114 169 SCQSELHRALERLAasqsrtHEDLFIIPIPNCDRNGNFHPKQCHPALdgqrGKCWCVDRKtGVKLPGGLEPKGELDC 245
Cdd:cd00191     1 PCERERASALESLA------GPKLSGLYVPQCDEDGNYEPVQCHGST----GYCWCVDPD-GEEIPGTRTRGGPPNC 66
IGFBP pfam00219
Insulin-like growth factor binding protein;
28-80 4.79e-13

Insulin-like growth factor binding protein;


Pssm-ID: 459717  Cd Length: 53  Bit Score: 61.96  E-value: 4.79e-13
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1907080114  28 PPCSEEKLARcrPPVGCEELVREPGCGCCATCALGLGMPCGVYTPRCGSGMRC 80
Cdd:pfam00219   3 PPCDPERCPP--PPPGCPAGVVLDGCGCCKVCARQEGEPCGVYTPPCGKGLRC 53
TY smart00211
Thyroglobulin type I repeats; The N-terminal region of human thyroglobulin contains 11 type-1 ...
 197-247 2.69e-12

Thyroglobulin type I repeats; The N-terminal region of human thyroglobulin contains 11 type-1 repeats TY repeats are proposed to be inhibitors of cysteine proteases and binding partners of heparin.


Pssm-ID: 214561  Cd Length: 46  Bit Score: 59.70  E-value: 2.69e-12
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|.
gi 1907080114  197 IPNCDRNGNFHPKQCHPAldgqRGKCWCVDRkTGVKLPGGLEPKGELDCHQ 247
Cdd:smart00211   1 IPQCDEDGNYEPVQCDGS----SGQCWCVDA-TGREIPGTRTEGGDPDCPS 46
 
Name Accession Description Interval E-value
IB smart00121
Insulin growth factor-binding protein homologues; High affinity binding partners of ...
 25-101 1.31e-26

Insulin growth factor-binding protein homologues; High affinity binding partners of insulin-like growth factors.


Pssm-ID: 197525  Cd Length: 75  Bit Score: 98.31  E-value: 1.31e-26
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907080114   25 IHCPPCSEEKLARCrpPVGCEELVREPGCGCCATCALGLGMPCGVYTPRCGSGMRCYPPRGVEKPLRTLMHGQGVCT 101
Cdd:smart00121   1 ARCPPCDPARCPPC--PPGCAELVRLDGCGCCPVCARQEGEPCGVYTPRCAPGLRCQPPPGEERPLRALLHGQGVCM 75
Thyroglobulin_1 pfam00086
Thyroglobulin type-1 repeat; Thyroglobulin type 1 repeats are thought to be involved in the ...
 170-245 2.97e-17

Thyroglobulin type-1 repeat; Thyroglobulin type 1 repeats are thought to be involved in the control of proteolytic degradation. The domain usually contains six conserved cysteines. These form three disulphide bridges. Cysteines 1 pairs with 2, 3 with 4 and 5 with 6.


Pssm-ID: 459665  Cd Length: 66  Bit Score: 73.49  E-value: 2.97e-17
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907080114 170 CQSELHRALERLAASQSrtHEDLFIipiPNCDRNGNFHPKQCHpaldGQRGKCWCVDRKtGVKLPGGLEPKGELDC 245
Cdd:pfam00086   1 CERERARALEQAASGRP--ASGLYI---PNCDEDGFYKPVQCH----GSTGYCWCVDPE-GQEIPGTRTRGGDPDC 66
TY cd00191
Thyroglobulin type I repeats.; The N-terminal region of human thyroglobulin contains 11 type-1 ...
 169-245 4.92e-14

Thyroglobulin type I repeats.; The N-terminal region of human thyroglobulin contains 11 type-1 repeats TY repeats are proposed to be inhibitors of cysteine proteases


Pssm-ID: 238114  Cd Length: 66  Bit Score: 65.18  E-value: 4.92e-14
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907080114 169 SCQSELHRALERLAasqsrtHEDLFIIPIPNCDRNGNFHPKQCHPALdgqrGKCWCVDRKtGVKLPGGLEPKGELDC 245
Cdd:cd00191     1 PCERERASALESLA------GPKLSGLYVPQCDEDGNYEPVQCHGST----GYCWCVDPD-GEEIPGTRTRGGPPNC 66
IGFBP pfam00219
Insulin-like growth factor binding protein;
28-80 4.79e-13

Insulin-like growth factor binding protein;


Pssm-ID: 459717  Cd Length: 53  Bit Score: 61.96  E-value: 4.79e-13
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1907080114  28 PPCSEEKLARcrPPVGCEELVREPGCGCCATCALGLGMPCGVYTPRCGSGMRC 80
Cdd:pfam00219   3 PPCDPERCPP--PPPGCPAGVVLDGCGCCKVCARQEGEPCGVYTPPCGKGLRC 53
TY smart00211
Thyroglobulin type I repeats; The N-terminal region of human thyroglobulin contains 11 type-1 ...
 197-247 2.69e-12

Thyroglobulin type I repeats; The N-terminal region of human thyroglobulin contains 11 type-1 repeats TY repeats are proposed to be inhibitors of cysteine proteases and binding partners of heparin.


Pssm-ID: 214561  Cd Length: 46  Bit Score: 59.70  E-value: 2.69e-12
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|.
gi 1907080114  197 IPNCDRNGNFHPKQCHPAldgqRGKCWCVDRkTGVKLPGGLEPKGELDCHQ 247
Cdd:smart00211   1 IPQCDEDGNYEPVQCDGS----SGQCWCVDA-TGREIPGTRTEGGDPDCPS 46
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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