enhancer of mRNA-decapping protein 3 isoform X3 [Mus musculus]
LSM14 family protein; bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase( domain architecture ID 10560091)
LSM14 family protein having an Sm fold consisting of a five-stranded beta-sheet and an alpha-helix at the N-terminus, may be involved in essential RNA-processing tasks; bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, allowing the repair of both epimers of NAD(P)HX
List of domain hits
Name | Accession | Description | Interval | E-value | |||
FDF | pfam09532 | FDF domain; The FDF domain, so called because of the conserved FDF at its N termini, is an ... |
15-118 | 1.06e-27 | |||
FDF domain; The FDF domain, so called because of the conserved FDF at its N termini, is an entirely alpha-helical domain with multiple exposed hydrophilic loops. It is found at the C terminus of Scd6p-like SM domains. It is also found with other divergent Sm domains and in proteins such as Dcp3p and FLJ21128, where it is found N terminal to the YjeF-N domain, a novel Rossmann fold domain. : Pssm-ID: 430668 Cd Length: 104 Bit Score: 104.07 E-value: 1.06e-27
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YjeF_N | pfam03853 | YjeF-related protein N-terminus; YjeF-N domain is a novel version of the Rossmann fold with a ... |
119-272 | 7.36e-22 | |||
YjeF-related protein N-terminus; YjeF-N domain is a novel version of the Rossmann fold with a set of catalytic residues and structural features that are different from the conventional dehydrogenases. YjeF-N domain is fused to Ribokinases in bacteria (YjeF), where they may be phosphatases, and to divergent Sm and the FDF domain in eukaryotes (Dcp3p and FLJ21128), where they may be involved in decapping and catalyze hydrolytic RNA-processing reactions. : Pssm-ID: 427546 [Multi-domain] Cd Length: 168 Bit Score: 90.36 E-value: 7.36e-22
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Name | Accession | Description | Interval | E-value | ||||
FDF | pfam09532 | FDF domain; The FDF domain, so called because of the conserved FDF at its N termini, is an ... |
15-118 | 1.06e-27 | ||||
FDF domain; The FDF domain, so called because of the conserved FDF at its N termini, is an entirely alpha-helical domain with multiple exposed hydrophilic loops. It is found at the C terminus of Scd6p-like SM domains. It is also found with other divergent Sm domains and in proteins such as Dcp3p and FLJ21128, where it is found N terminal to the YjeF-N domain, a novel Rossmann fold domain. Pssm-ID: 430668 Cd Length: 104 Bit Score: 104.07 E-value: 1.06e-27
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YjeF_N | pfam03853 | YjeF-related protein N-terminus; YjeF-N domain is a novel version of the Rossmann fold with a ... |
119-272 | 7.36e-22 | ||||
YjeF-related protein N-terminus; YjeF-N domain is a novel version of the Rossmann fold with a set of catalytic residues and structural features that are different from the conventional dehydrogenases. YjeF-N domain is fused to Ribokinases in bacteria (YjeF), where they may be phosphatases, and to divergent Sm and the FDF domain in eukaryotes (Dcp3p and FLJ21128), where they may be involved in decapping and catalyze hydrolytic RNA-processing reactions. Pssm-ID: 427546 [Multi-domain] Cd Length: 168 Bit Score: 90.36 E-value: 7.36e-22
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Nnr1 | COG0062 | NAD(P)H-hydrate repair enzyme Nnr, NAD(P)H-hydrate epimerase domain [Nucleotide transport and ... |
149-324 | 5.76e-07 | ||||
NAD(P)H-hydrate repair enzyme Nnr, NAD(P)H-hydrate epimerase domain [Nucleotide transport and metabolism]; Pssm-ID: 439832 [Multi-domain] Cd Length: 499 Bit Score: 51.02 E-value: 5.76e-07
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PLN03050 | PLN03050 | pyridoxine (pyridoxamine) 5'-phosphate oxidase; Provisional |
102-186 | 1.41e-04 | ||||
pyridoxine (pyridoxamine) 5'-phosphate oxidase; Provisional Pssm-ID: 215551 [Multi-domain] Cd Length: 246 Bit Score: 42.56 E-value: 1.41e-04
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Name | Accession | Description | Interval | E-value | ||||
FDF | pfam09532 | FDF domain; The FDF domain, so called because of the conserved FDF at its N termini, is an ... |
15-118 | 1.06e-27 | ||||
FDF domain; The FDF domain, so called because of the conserved FDF at its N termini, is an entirely alpha-helical domain with multiple exposed hydrophilic loops. It is found at the C terminus of Scd6p-like SM domains. It is also found with other divergent Sm domains and in proteins such as Dcp3p and FLJ21128, where it is found N terminal to the YjeF-N domain, a novel Rossmann fold domain. Pssm-ID: 430668 Cd Length: 104 Bit Score: 104.07 E-value: 1.06e-27
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YjeF_N | pfam03853 | YjeF-related protein N-terminus; YjeF-N domain is a novel version of the Rossmann fold with a ... |
119-272 | 7.36e-22 | ||||
YjeF-related protein N-terminus; YjeF-N domain is a novel version of the Rossmann fold with a set of catalytic residues and structural features that are different from the conventional dehydrogenases. YjeF-N domain is fused to Ribokinases in bacteria (YjeF), where they may be phosphatases, and to divergent Sm and the FDF domain in eukaryotes (Dcp3p and FLJ21128), where they may be involved in decapping and catalyze hydrolytic RNA-processing reactions. Pssm-ID: 427546 [Multi-domain] Cd Length: 168 Bit Score: 90.36 E-value: 7.36e-22
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Nnr1 | COG0062 | NAD(P)H-hydrate repair enzyme Nnr, NAD(P)H-hydrate epimerase domain [Nucleotide transport and ... |
149-324 | 5.76e-07 | ||||
NAD(P)H-hydrate repair enzyme Nnr, NAD(P)H-hydrate epimerase domain [Nucleotide transport and metabolism]; Pssm-ID: 439832 [Multi-domain] Cd Length: 499 Bit Score: 51.02 E-value: 5.76e-07
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PLN03050 | PLN03050 | pyridoxine (pyridoxamine) 5'-phosphate oxidase; Provisional |
102-186 | 1.41e-04 | ||||
pyridoxine (pyridoxamine) 5'-phosphate oxidase; Provisional Pssm-ID: 215551 [Multi-domain] Cd Length: 246 Bit Score: 42.56 E-value: 1.41e-04
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Blast search parameters | ||||
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