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Conserved domains on  [gi|1889995604|ref|XP_035697598|]
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glycoprotein 3-alpha-L-fucosyltransferase A-like [Branchiostoma floridae]

Protein Classification

glycosyltransferase family 10 fucosyltransferase( domain architecture ID 11074498)

glycosyltransferase family 10 fucosyltransferase transfers fucose from GDP-Fucose to GlcNAc in an alpha1,3 linkage

CAZY:  GT10
EC:  2.4.1.-
Gene Ontology:  GO:0006486|GO:0008417
PubMed:  9451017|9334165

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Glyco_transf_10 pfam00852
Glycosyltransferase family 10 (fucosyltransferase) C-term; This is the C-terminal domain of a ...
 126-304 3.66e-72

Glycosyltransferase family 10 (fucosyltransferase) C-term; This is the C-terminal domain of a family of fucosyltransferases. This enzyme transfers fucose from GDP-Fucose to GlcNAc in an alpha1,3 linkage. This family is known as glycosyltransferase family 10. The C-terminal domain is the likely binding-region for ADP (manuscript in publication).


:

Pssm-ID: 459962  Cd Length: 176  Bit Score: 221.27  E-value: 3.66e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1889995604 126 KGKTKLAVWFISKCSSRAHRILYAQELVKHLHVDIFGKCGRIvcEKQDFQCTVRHIRQYKFYLAFENMKCKQYITEKYWR 205
Cdd:pfam00852   2 PKKTKLVAWVVSNCNTSSARVKYYNELQKHIEVDVYGRCGNL--KPLSPGCYLMLISSYKFYLAFENSICKDYITEKLWN 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1889995604 206 hALTNNVVPVVLGAPKKDYEYLTPPNSFIHVDDFESPKALADYLKLLDKDTEMYNSYFKWKTNPPKNIPLDDGVWCNLCR 285
Cdd:pfam00852  80 -ALLRGAVPVVLGPPRANYERFAPPDSFIHVDDFPSPKELAEYLLYLDKNDTLYLRYFWWRKHYRVIPLSSWEPFCDLCQ 158

                         170
                  ....*....|....*....
gi 1889995604 286 KLLGIcPNTRKMYTNLDKW 304
Cdd:pfam00852 159 KLHRD-SRRYKTYPDLAKW 176
Glyco_tran_10_N super family cl25278
Fucosyltransferase, N-terminal; This is the N-terminal domain of a family of ...
 18-99 3.18e-12

Fucosyltransferase, N-terminal; This is the N-terminal domain of a family of fucosyltransferases. This enzyme transfers fucose from GDP-Fucose to GlcNAc in an alpha1,3 linkage. This family is known as glycosyltransferase family 10. The N-terminal domain is the likely binding-region for the fucose-like substrate (manuscript in publication).


The actual alignment was detected with superfamily member pfam17039:

Pssm-ID: 465336  Cd Length: 109  Bit Score: 62.33  E-value: 3.18e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1889995604  18 CPTL---PQCTFTTSAENIHTADAVIFENSQLPLTYleSEMPQ-KRSQHQHWIWLISECPNYlTINLNSYSGVFNWTITY 93
Cdd:pfam17039  22 CSDLfgiTGCRLTYDRSLYPEADAVVFHHRDISLDL--KDLPYsPRPPGQRWVWFNLESPTN-TPRLPGLDNFFNWTMTY 98


                  ....*.
gi 1889995604  94 RTDSDV 99
Cdd:pfam17039  99 RRDSDI 104
 
Name Accession Description Interval E-value
Glyco_transf_10 pfam00852
Glycosyltransferase family 10 (fucosyltransferase) C-term; This is the C-terminal domain of a ...
 126-304 3.66e-72

Glycosyltransferase family 10 (fucosyltransferase) C-term; This is the C-terminal domain of a family of fucosyltransferases. This enzyme transfers fucose from GDP-Fucose to GlcNAc in an alpha1,3 linkage. This family is known as glycosyltransferase family 10. The C-terminal domain is the likely binding-region for ADP (manuscript in publication).


Pssm-ID: 459962  Cd Length: 176  Bit Score: 221.27  E-value: 3.66e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1889995604 126 KGKTKLAVWFISKCSSRAHRILYAQELVKHLHVDIFGKCGRIvcEKQDFQCTVRHIRQYKFYLAFENMKCKQYITEKYWR 205
Cdd:pfam00852   2 PKKTKLVAWVVSNCNTSSARVKYYNELQKHIEVDVYGRCGNL--KPLSPGCYLMLISSYKFYLAFENSICKDYITEKLWN 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1889995604 206 hALTNNVVPVVLGAPKKDYEYLTPPNSFIHVDDFESPKALADYLKLLDKDTEMYNSYFKWKTNPPKNIPLDDGVWCNLCR 285
Cdd:pfam00852  80 -ALLRGAVPVVLGPPRANYERFAPPDSFIHVDDFPSPKELAEYLLYLDKNDTLYLRYFWWRKHYRVIPLSSWEPFCDLCQ 158

                         170
                  ....*....|....*....
gi 1889995604 286 KLLGIcPNTRKMYTNLDKW 304
Cdd:pfam00852 159 KLHRD-SRRYKTYPDLAKW 176
Glyco_tran_10_N pfam17039
Fucosyltransferase, N-terminal; This is the N-terminal domain of a family of ...
 18-99 3.18e-12

Fucosyltransferase, N-terminal; This is the N-terminal domain of a family of fucosyltransferases. This enzyme transfers fucose from GDP-Fucose to GlcNAc in an alpha1,3 linkage. This family is known as glycosyltransferase family 10. The N-terminal domain is the likely binding-region for the fucose-like substrate (manuscript in publication).


Pssm-ID: 465336  Cd Length: 109  Bit Score: 62.33  E-value: 3.18e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1889995604  18 CPTL---PQCTFTTSAENIHTADAVIFENSQLPLTYleSEMPQ-KRSQHQHWIWLISECPNYlTINLNSYSGVFNWTITY 93
Cdd:pfam17039  22 CSDLfgiTGCRLTYDRSLYPEADAVVFHHRDISLDL--KDLPYsPRPPGQRWVWFNLESPTN-TPRLPGLDNFFNWTMTY 98


                  ....*.
gi 1889995604  94 RTDSDV 99
Cdd:pfam17039  99 RRDSDI 104
 
Name Accession Description Interval E-value
Glyco_transf_10 pfam00852
Glycosyltransferase family 10 (fucosyltransferase) C-term; This is the C-terminal domain of a ...
 126-304 3.66e-72

Glycosyltransferase family 10 (fucosyltransferase) C-term; This is the C-terminal domain of a family of fucosyltransferases. This enzyme transfers fucose from GDP-Fucose to GlcNAc in an alpha1,3 linkage. This family is known as glycosyltransferase family 10. The C-terminal domain is the likely binding-region for ADP (manuscript in publication).


Pssm-ID: 459962  Cd Length: 176  Bit Score: 221.27  E-value: 3.66e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1889995604 126 KGKTKLAVWFISKCSSRAHRILYAQELVKHLHVDIFGKCGRIvcEKQDFQCTVRHIRQYKFYLAFENMKCKQYITEKYWR 205
Cdd:pfam00852   2 PKKTKLVAWVVSNCNTSSARVKYYNELQKHIEVDVYGRCGNL--KPLSPGCYLMLISSYKFYLAFENSICKDYITEKLWN 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1889995604 206 hALTNNVVPVVLGAPKKDYEYLTPPNSFIHVDDFESPKALADYLKLLDKDTEMYNSYFKWKTNPPKNIPLDDGVWCNLCR 285
Cdd:pfam00852  80 -ALLRGAVPVVLGPPRANYERFAPPDSFIHVDDFPSPKELAEYLLYLDKNDTLYLRYFWWRKHYRVIPLSSWEPFCDLCQ 158

                         170
                  ....*....|....*....
gi 1889995604 286 KLLGIcPNTRKMYTNLDKW 304
Cdd:pfam00852 159 KLHRD-SRRYKTYPDLAKW 176
Glyco_tran_10_N pfam17039
Fucosyltransferase, N-terminal; This is the N-terminal domain of a family of ...
 18-99 3.18e-12

Fucosyltransferase, N-terminal; This is the N-terminal domain of a family of fucosyltransferases. This enzyme transfers fucose from GDP-Fucose to GlcNAc in an alpha1,3 linkage. This family is known as glycosyltransferase family 10. The N-terminal domain is the likely binding-region for the fucose-like substrate (manuscript in publication).


Pssm-ID: 465336  Cd Length: 109  Bit Score: 62.33  E-value: 3.18e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1889995604  18 CPTL---PQCTFTTSAENIHTADAVIFENSQLPLTYleSEMPQ-KRSQHQHWIWLISECPNYlTINLNSYSGVFNWTITY 93
Cdd:pfam17039  22 CSDLfgiTGCRLTYDRSLYPEADAVVFHHRDISLDL--KDLPYsPRPPGQRWVWFNLESPTN-TPRLPGLDNFFNWTMTY 98


                  ....*.
gi 1889995604  94 RTDSDV 99
Cdd:pfam17039  99 RRDSDI 104
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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