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Conserved domains on  [gi|1839619182|ref|XP_034076419|]
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dnaJ homolog subfamily B member 6a [Gymnodraco acuticeps]

Protein Classification

molecular chaperone DnaJ( domain architecture ID 1000952)

molecular chaperone DnaJ, part of the DnaK-DnaJ-GrpE system, prevents the aggregation of unfolded substrate and acts primarily by stimulating the ATPase activity of Hsp70

CATH:  2.10.230.10
Gene Ontology:  GO:0051082|GO:0005524|GO:0009408|GO:0006457
PubMed:  8016869|15063739|29290615
SCOP:  4003813|4002149

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK10767 super family cl35946
chaperone protein DnaJ; Provisional
 4-110 6.35e-44

chaperone protein DnaJ; Provisional


The actual alignment was detected with superfamily member PRK10767:

Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 152.61  E-value: 6.35e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1839619182   4 YYQVLGVRRESSADDIKKAYRKLALKWHPDKNPENKdEAEKKFKELSEAYEVLSDVNKRSLYDRYGKEGLtgNNGGRGGH 83
Cdd:PRK10767    6 YYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDK-EAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAF--EQGGGGGG 82

                          90       100
                  ....*....|....*....|....*..
gi 1839619182  84 FHNGNHFQEPFtfrnpDDVFREFFGGR 110
Cdd:PRK10767   83 FGGGGGFGDIF-----GDIFGDIFGGG 104
 
Name Accession Description Interval E-value
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 4-110 6.35e-44

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 152.61  E-value: 6.35e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1839619182   4 YYQVLGVRRESSADDIKKAYRKLALKWHPDKNPENKdEAEKKFKELSEAYEVLSDVNKRSLYDRYGKEGLtgNNGGRGGH 83
Cdd:PRK10767    6 YYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDK-EAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAF--EQGGGGGG 82

                          90       100
                  ....*....|....*....|....*..
gi 1839619182  84 FHNGNHFQEPFtfrnpDDVFREFFGGR 110
Cdd:PRK10767   83 FGGGGGFGDIF-----GDIFGDIFGGG 104
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 4-140 1.80e-41

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 145.82  E-value: 1.80e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1839619182   4 YYQVLGVRRESSADDIKKAYRKLALKWHPDKNPEnkDEAEKKFKELSEAYEVLSDVNKRSLYDRYGKEGLTGNNGGRGGH 83
Cdd:TIGR02349   2 YYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD--KEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGGG 79

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1839619182  84 FhngnhfqEPFTFRNPDDvfrefFGgrDPFADFFGAdpfsedpFFSGGRRHHSQRHR 140
Cdd:TIGR02349  80 F-------NGFDIGFFGD-----FG--DIFGDFFGG-------GGGSGRRRRSGPRR 115
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 3-66 3.45e-35

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 120.66  E-value: 3.45e-35
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1839619182   3 EYYQVLGVRRESSADDIKKAYRKLALKWHPDKNPENKdEAEKKFKELSEAYEVLSDVNKRSLYD 66
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDP-EAEEKFKEINEAYEVLSDPEKRAIYD 63
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 4-74 7.92e-34

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 119.81  E-value: 7.92e-34
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1839619182   4 YYQVLGVRRESSADDIKKAYRKLALKWHPDKNPENKdEAEKKFKELSEAYEVLSDVNKRSLYDRYGKEGLT 74
Cdd:COG0484     2 YYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDP-EAEEKFKEINEAYEVLSDPEKRAAYDRFGHAAEL 71
DnaJ smart00271
DnaJ molecular chaperone homology domain;
2-61 1.66e-29

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 106.16  E-value: 1.66e-29
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1839619182    2 VEYYQVLGVRRESSADDIKKAYRKLALKWHPDKNPENKDEAEKKFKELSEAYEVLSDVNK 61
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
3-125 7.83e-29

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 113.76  E-value: 7.83e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1839619182   3 EYYQVLGVRRESSADDIKKAYRKLALKWHPDKNPEnkDEAEKKFKELSEAYEVLSDVNKRSLYDRYGKEGLTGnnggrgg 82
Cdd:NF037946    6 DYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRNKA--PDAAEIFAEINEAYEVLSNPEKRANYDKYGHDGVDG------- 76

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 1839619182  83 hfhngnhfQEPFTFrNPDDVFREFFG---GRDPFADFFGADPFSED 125
Cdd:NF037946   77 --------EGGFGF-DAFDVFSSFFEtinKSGAFLDDSVDESVSAD 113
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 3-58 1.38e-27

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 100.70  E-value: 1.38e-27
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1839619182   3 EYYQVLGVRRESSADDIKKAYRKLALKWHPDKNPENKdEAEKKFKELSEAYEVLSD 58
Cdd:cd06257     1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDP-EAEEKFKEINEAYEVLSD 55
 
Name Accession Description Interval E-value
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 4-110 6.35e-44

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 152.61  E-value: 6.35e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1839619182   4 YYQVLGVRRESSADDIKKAYRKLALKWHPDKNPENKdEAEKKFKELSEAYEVLSDVNKRSLYDRYGKEGLtgNNGGRGGH 83
Cdd:PRK10767    6 YYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDK-EAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAF--EQGGGGGG 82

                          90       100
                  ....*....|....*....|....*..
gi 1839619182  84 FHNGNHFQEPFtfrnpDDVFREFFGGR 110
Cdd:PRK10767   83 FGGGGGFGDIF-----GDIFGDIFGGG 104
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 4-140 1.80e-41

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 145.82  E-value: 1.80e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1839619182   4 YYQVLGVRRESSADDIKKAYRKLALKWHPDKNPEnkDEAEKKFKELSEAYEVLSDVNKRSLYDRYGKEGLTGNNGGRGGH 83
Cdd:TIGR02349   2 YYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD--KEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGGG 79

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1839619182  84 FhngnhfqEPFTFRNPDDvfrefFGgrDPFADFFGAdpfsedpFFSGGRRHHSQRHR 140
Cdd:TIGR02349  80 F-------NGFDIGFFGD-----FG--DIFGDFFGG-------GGGSGRRRRSGPRR 115
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 3-66 3.45e-35

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 120.66  E-value: 3.45e-35
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1839619182   3 EYYQVLGVRRESSADDIKKAYRKLALKWHPDKNPENKdEAEKKFKELSEAYEVLSDVNKRSLYD 66
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDP-EAEEKFKEINEAYEVLSDPEKRAIYD 63
PRK14280 PRK14280
molecular chaperone DnaJ;
3-120 5.67e-35

molecular chaperone DnaJ;


Pssm-ID: 237656 [Multi-domain]  Cd Length: 376  Bit Score: 129.07  E-value: 5.67e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1839619182   3 EYYQVLGVRRESSADDIKKAYRKLALKWHPDKNPEnkDEAEKKFKELSEAYEVLSDVNKRSLYDRYGKeglTGNNGGRGG 82
Cdd:PRK14280    5 DYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKE--EGADEKFKEISEAYEVLSDDQKRAQYDQFGH---AGPNQGFGG 79

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 1839619182  83 HFHNGNHFQEPFTFrnpDDVFREFFGG----RDPFADFFGAD 120
Cdd:PRK14280   80 GGFGGGDFGGGFGF---EDIFSSFFGGggrrRDPNAPRQGAD 118
PRK14291 PRK14291
chaperone protein DnaJ; Provisional
 3-138 1.02e-34

chaperone protein DnaJ; Provisional


Pssm-ID: 237661 [Multi-domain]  Cd Length: 382  Bit Score: 128.73  E-value: 1.02e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1839619182   3 EYYQVLGVRRESSADDIKKAYRKLALKWHPDKNPEnkDEAEKKFKELSEAYEVLSDVNKRSLYDRYGKEGLTGNnggrGG 82
Cdd:PRK14291    4 DYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN--PEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGS----GQ 77

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1839619182  83 HFHNGNHFQEpFTFRNPDDVFREFFGGRDpFADFFGADPfsedpfFSGGRRHHSQR 138
Cdd:PRK14291   78 QQQGQEGFSD-FGGGNIEDILEDVFDIFG-FGDIFGRRR------ATRERRKTYQR 125
PRK14301 PRK14301
chaperone protein DnaJ; Provisional
 3-118 1.03e-34

chaperone protein DnaJ; Provisional


Pssm-ID: 237668 [Multi-domain]  Cd Length: 373  Bit Score: 128.32  E-value: 1.03e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1839619182   3 EYYQVLGVRRESSADDIKKAYRKLALKWHPDKNPENKdEAEKKFKELSEAYEVLSDVNKRSLYDRYGKEGLTGNNGGRGg 82
Cdd:PRK14301    5 DYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNP-EAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNGNGGFGG- 82

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1839619182  83 hfhngnhfqepftFRNPDDVFREFfggRDPFADFFG 118
Cdd:PRK14301   83 -------------FSSAEDIFSHF---SDIFGDLFG 102
PRK14294 PRK14294
chaperone protein DnaJ; Provisional
 4-133 2.38e-34

chaperone protein DnaJ; Provisional


Pssm-ID: 237664 [Multi-domain]  Cd Length: 366  Bit Score: 127.19  E-value: 2.38e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1839619182   4 YYQVLGVRRESSADDIKKAYRKLALKWHPDKNPENKdEAEKKFKELSEAYEVLSDVNKRSLYDRYGKEGLtgNNGGRGGh 83
Cdd:PRK14294    6 YYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDK-EAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGL--SGTGFSG- 81

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 1839619182  84 fhngnhfqepftFRNPDDVFREFfggRDPFADFFGadpfsedpfFSGGRR 133
Cdd:PRK14294   82 ------------FSGFDDIFSSF---GDIFEDFFG---------FGGGRR 107
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 4-74 7.92e-34

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 119.81  E-value: 7.92e-34
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1839619182   4 YYQVLGVRRESSADDIKKAYRKLALKWHPDKNPENKdEAEKKFKELSEAYEVLSDVNKRSLYDRYGKEGLT 74
Cdd:COG0484     2 YYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDP-EAEEKFKEINEAYEVLSDPEKRAAYDRFGHAAEL 71
PRK14289 PRK14289
molecular chaperone DnaJ;
3-142 8.17e-34

molecular chaperone DnaJ;


Pssm-ID: 237660 [Multi-domain]  Cd Length: 386  Bit Score: 126.48  E-value: 8.17e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1839619182   3 EYYQVLGVRRESSADDIKKAYRKLALKWHPDKNPENKdEAEKKFKELSEAYEVLSDVNKRSLYDRYGKEGLTGNNGGRGg 82
Cdd:PRK14289    6 DYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDK-EAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGVGGAAGGGG- 83

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1839619182  83 hfHNGNHFQEPFTFRNPDDVFREFFGGrdpFADFFGadpfsedpfFSGGRrhhSQRHRSR 142
Cdd:PRK14289   84 --FSGEGMSMEDIFSMFGDIFGGHGGG---FGGFGG---------FGGGG---SQQRVFR 126
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
 3-143 1.02e-33

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 125.68  E-value: 1.02e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1839619182   3 EYYQVLGVRRESSADDIKKAYRKLALKWHPDKNPENKDEAEKKFKELSEAYEVLSDVNKRSLYDRYG--KEGLTGNNGGR 80
Cdd:PRK14282    5 DYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGyvGEQPPYQETES 84

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1839619182  81 GGHFHngnhfqepftfrnpDDVFREffggrdpFADFFGADPFseDPFFSGGRRHHSQRHRSRT 143
Cdd:PRK14282   85 GGGFF--------------EDIFKD-------FENIFNRDIF--DIFFGERRTQEEQREYARR 124
PRK14281 PRK14281
chaperone protein DnaJ; Provisional
 3-133 3.99e-33

chaperone protein DnaJ; Provisional


Pssm-ID: 237657 [Multi-domain]  Cd Length: 397  Bit Score: 124.54  E-value: 3.99e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1839619182   3 EYYQVLGVRRESSADDIKKAYRKLALKWHPDKNPENKdEAEKKFKELSEAYEVLSDVNKRSLYDRYGKEGL--TGNNGGR 80
Cdd:PRK14281    4 DYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNK-EAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVgsSAASGGG 82

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1839619182  81 GGHFHNGNHFQEPFTfrnpddVFREFFGGRdpfADFFGADPFS-EDPFFSGGRR 133
Cdd:PRK14281   83 PGYGGGGGDFNDIFS------AFNDMFGGG---ARRGGGSPFGfEDVFGGGGRR 127
PRK14290 PRK14290
chaperone protein DnaJ; Provisional
 3-139 1.52e-32

chaperone protein DnaJ; Provisional


Pssm-ID: 172778 [Multi-domain]  Cd Length: 365  Bit Score: 122.73  E-value: 1.52e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1839619182   3 EYYQVLGVRRESSADDIKKAYRKLALKWHPDKNPENKDEAEKKFKELSEAYEVLSDVNKRSLYDRYGKEGLtgNNGGRGG 82
Cdd:PRK14290    4 DYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDF--GAGGSNF 81

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1839619182  83 HFHNGNHFQEpftfrnPDDVFREFFGGRdpfadfFGADpfsedpFFSGGRRHHSQRH 139
Cdd:PRK14290   82 NWDNFTHFSD------INDIFNQIFGGN------FGSD------FFSGFGNQQSTRN 120
PRK14276 PRK14276
chaperone protein DnaJ; Provisional
 3-120 2.58e-32

chaperone protein DnaJ; Provisional


Pssm-ID: 237653 [Multi-domain]  Cd Length: 380  Bit Score: 122.12  E-value: 2.58e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1839619182   3 EYYQVLGVRRESSADDIKKAYRKLALKWHPDKNPEnkDEAEKKFKELSEAYEVLSDVNKRSLYDRYGKeglTGNNGGRGG 82
Cdd:PRK14276    5 EYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKE--PGAEEKYKEVQEAYETLSDPQKRAAYDQYGA---AGANGGFGG 79

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 1839619182  83 HFHNGNHFQEPFTFRNPDDVFREFFGG----RDPFADFFGAD 120
Cdd:PRK14276   80 GAGGFGGFDGSGGFGGFEDIFSSFFGGggarRNPNAPRQGDD 121
PRK14284 PRK14284
chaperone protein DnaJ; Provisional
 3-118 9.28e-32

chaperone protein DnaJ; Provisional


Pssm-ID: 237658 [Multi-domain]  Cd Length: 391  Bit Score: 121.10  E-value: 9.28e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1839619182   3 EYYQVLGVRRESSADDIKKAYRKLALKWHPDKNPENKdEAEKKFKELSEAYEVLSDVNKRSLYDRYGKEGLTGNNGGRGG 82
Cdd:PRK14284    2 DYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDA-EAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGAGGFGG 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 1839619182  83 HfhngnhfqepfTFRNPDDVFREF-------FGGRDPFADFFG 118
Cdd:PRK14284   81 A-----------GMGNMEDALRTFmgafggeFGGGGSFFEGLF 112
PRK14298 PRK14298
chaperone protein DnaJ; Provisional
 3-133 1.72e-30

chaperone protein DnaJ; Provisional


Pssm-ID: 184612 [Multi-domain]  Cd Length: 377  Bit Score: 117.26  E-value: 1.72e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1839619182   3 EYYQVLGVRRESSADDIKKAYRKLALKWHPDKNPEnkDEAEKKFKELSEAYEVLSDVNKRSLYDRYGKEGLTgnnggrgg 82
Cdd:PRK14298    6 DYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKE--PDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGID-------- 75

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1839619182  83 hfhngNHFQEPFTFRNPDdvfrefFGGrdpFADFFGAdpfsedpFFSGGRR 133
Cdd:PRK14298   76 -----NQYSAEDIFRGAD------FGG---FGDIFEM-------FFGGGGR 105
PRK14286 PRK14286
chaperone protein DnaJ; Provisional
 4-138 6.80e-30

chaperone protein DnaJ; Provisional


Pssm-ID: 172774 [Multi-domain]  Cd Length: 372  Bit Score: 115.47  E-value: 6.80e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1839619182   4 YYQVLGVRRESSADDIKKAYRKLALKWHPDKNPENKdEAEKKFKELSEAYEVLSDVNKRSLYDRYGKEGLTGNNGGRGGH 83
Cdd:PRK14286    6 YYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNK-ESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAGAGGFGQG 84

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1839619182  84 fhngnhfqepfTFRNPDDVFREFfggRDPFADFFGADPFSEdpfFSGGRRHHSQR 138
Cdd:PRK14286   85 -----------AYTDFSDIFGDF---GDIFGDFFGGGRGGG---SGGGRRSGPQR 122
DnaJ smart00271
DnaJ molecular chaperone homology domain;
2-61 1.66e-29

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 106.16  E-value: 1.66e-29
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1839619182    2 VEYYQVLGVRRESSADDIKKAYRKLALKWHPDKNPENKDEAEKKFKELSEAYEVLSDVNK 61
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60
PRK14297 PRK14297
molecular chaperone DnaJ;
3-109 2.99e-29

molecular chaperone DnaJ;


Pssm-ID: 184611 [Multi-domain]  Cd Length: 380  Bit Score: 114.11  E-value: 2.99e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1839619182   3 EYYQVLGVRRESSADDIKKAYRKLALKWHPDKNPENKdEAEKKFKELSEAYEVLSDVNKRSLYDRYGKEGLTGNNGGRGG 82
Cdd:PRK14297    5 DYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNK-EAEEKFKEINEAYQVLSDPQKKAQYDQFGTADFNGAGGFGSG 83

                          90       100
                  ....*....|....*....|....*..
gi 1839619182  83 HFhNGNHFQEPFTFrnpDDVFREFFGG 109
Cdd:PRK14297   84 GF-GGFDFSDMGGF---GDIFDSFFGG 106
PRK14277 PRK14277
chaperone protein DnaJ; Provisional
 3-133 3.56e-29

chaperone protein DnaJ; Provisional


Pssm-ID: 184599 [Multi-domain]  Cd Length: 386  Bit Score: 113.74  E-value: 3.56e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1839619182   3 EYYQVLGVRRESSADDIKKAYRKLALKWHPDKNPENKdEAEKKFKELSEAYEVLSDVNKRSLYDRYGKEGLTGNNGGRGG 82
Cdd:PRK14277    6 DYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDK-EAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGGFGQGG 84

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1839619182  83 hFHNGNHFQEPFTFrnpddvfrEFFGGRDPFADFFGAdpfsedpFFSGGRR 133
Cdd:PRK14277   85 -FGQGGFGGGGFDF--------DFGGFGDIFEDIFGD-------FFGTGRR 119
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
3-125 7.83e-29

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 113.76  E-value: 7.83e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1839619182   3 EYYQVLGVRRESSADDIKKAYRKLALKWHPDKNPEnkDEAEKKFKELSEAYEVLSDVNKRSLYDRYGKEGLTGnnggrgg 82
Cdd:NF037946    6 DYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRNKA--PDAAEIFAEINEAYEVLSNPEKRANYDKYGHDGVDG------- 76

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 1839619182  83 hfhngnhfQEPFTFrNPDDVFREFFG---GRDPFADFFGADPFSED 125
Cdd:NF037946   77 --------EGGFGF-DAFDVFSSFFEtinKSGAFLDDSVDESVSAD 113
PRK14283 PRK14283
chaperone protein DnaJ; Provisional
 3-138 1.43e-28

chaperone protein DnaJ; Provisional


Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 112.23  E-value: 1.43e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1839619182   3 EYYQVLGVRRESSADDIKKAYRKLALKWHPDKNPEnkDEAEKKFKELSEAYEVLSDVNKRSLYDRYGKEGLTGnnggrgg 82
Cdd:PRK14283    6 DYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEE--EGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGMDG------- 76

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1839619182  83 hFHNGNHFQEPftfrNPDDVFREFFGGRDPFADFFGadpfsedpfFSGGRRHHSQR 138
Cdd:PRK14283   77 -FSQEDIFNNI----NFEDIFQGFGFGIGNIFDMFG---------FGGGSRHGPQR 118
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 3-58 1.38e-27

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 100.70  E-value: 1.38e-27
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1839619182   3 EYYQVLGVRRESSADDIKKAYRKLALKWHPDKNPENKdEAEKKFKELSEAYEVLSD 58
Cdd:cd06257     1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDP-EAEEKFKEINEAYEVLSD 55
PRK14278 PRK14278
chaperone protein DnaJ; Provisional
 3-109 6.55e-27

chaperone protein DnaJ; Provisional


Pssm-ID: 237654 [Multi-domain]  Cd Length: 378  Bit Score: 107.45  E-value: 6.55e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1839619182   3 EYYQVLGVRRESSADDIKKAYRKLALKWHPDKNPEnkDEAEKKFKELSEAYEVLSDVNKRSLYDRYGKEglTGNNGGRGG 82
Cdd:PRK14278    4 DYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPD--EEAQEKFKEISVAYEVLSDPEKRRIVDLGGDP--LESAGGGGG 79

                          90       100
                  ....*....|....*....|....*..
gi 1839619182  83 HFHNGnhfqepftFRNPDDVFREFFGG 109
Cdd:PRK14278   80 GFGGG--------FGGLGDVFEAFFGG 98
PRK14293 PRK14293
molecular chaperone DnaJ;
1-143 6.97e-27

molecular chaperone DnaJ;


Pssm-ID: 237663 [Multi-domain]  Cd Length: 374  Bit Score: 107.38  E-value: 6.97e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1839619182   1 MVEYYQVLGVRRESSADDIKKAYRKLALKWHPDKNPENKdeAEKKFKELSEAYEVLSDVNKRSLYDRYGKEGLTGNNGGr 80
Cdd:PRK14293    2 AADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKEPG--AEDRFKEINRAYEVLSDPETRARYDQFGEAGVSGAAGF- 78

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1839619182  81 gghfhngnhfqepftfrnPDdvfrefFGGRDPFADFFgadpfseDPFFSG-GRRHHSQRHRSRT 143
Cdd:PRK14293   79 ------------------PD------MGDMGGFADIF-------ETFFSGfGGAGGQGGRRRRR 111
SEC63 COG5407
Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular ...
 3-62 1.24e-26

Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 444165 [Multi-domain]  Cd Length: 61  Bit Score: 98.53  E-value: 1.24e-26
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1839619182   3 EYYQVLGVRRESSADDIKKAYRKLALKWHPDKNPENKDeAEKKFKELSEAYEVLSDVNKR 62
Cdd:COG5407     1 DPYEVLGVAKTASADEIKKAYRKLAKKYHPDRNKGDPK-AEERFKEINEAYELLSDAEKR 59
PRK14285 PRK14285
chaperone protein DnaJ; Provisional
 3-142 2.23e-26

chaperone protein DnaJ; Provisional


Pssm-ID: 172773 [Multi-domain]  Cd Length: 365  Bit Score: 105.84  E-value: 2.23e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1839619182   3 EYYQVLGVRRESSADDIKKAYRKLALKWHPDKNPENKdEAEKKFKELSEAYEVLSDVNKRSLYDRYGKEGLTGNNGGRGg 82
Cdd:PRK14285    4 DYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNK-EAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGGGGFEG- 81

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1839619182  83 hFHNGnhfqepftfrnpddvfreFFGGRDPFADFfgADPFseDPFFSGGRRHHSQRHRSR 142
Cdd:PRK14285   82 -FSGG------------------FSGFSDIFEDF--GDIF--DSFFTGNRGQDKNRKHEK 118
PRK14292 PRK14292
chaperone protein DnaJ; Provisional
 1-109 6.02e-26

chaperone protein DnaJ; Provisional


Pssm-ID: 237662 [Multi-domain]  Cd Length: 371  Bit Score: 104.97  E-value: 6.02e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1839619182   1 MVEYYQVLGVRRESSADDIKKAYRKLALKWHPDKNPEnkDEAEKKFKELSEAYEVLSDVNKRSLYDRYGKEGLTGNNGGr 80
Cdd:PRK14292    1 MMDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKE--KGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAPGAGMPGG- 77

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1839619182  81 gghfhngnhfqEPFTFR--NPDDVFREFFGG 109
Cdd:PRK14292   78 -----------DPFGGMgfDPMDIFEQLFGG 97
PRK14299 PRK14299
chaperone protein DnaJ; Provisional
 3-138 2.85e-25

chaperone protein DnaJ; Provisional


Pssm-ID: 237667 [Multi-domain]  Cd Length: 291  Bit Score: 101.55  E-value: 2.85e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1839619182   3 EYYQVLGVRRESSADDIKKAYRKLALKWHPDKNPEnkDEAEKKFKELSEAYEVLSDVNKRSLYDRYGKEGLTGN------ 76
Cdd:PRK14299    5 DYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKS--PGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGwqgppp 82

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1839619182  77 NGGRGGHFHNGNhfQEPFTfrnpdDVFREFFGGRDPFADFfgadpfsEDPFFSGGRRHHSQR 138
Cdd:PRK14299   83 GPPGGGDFSGFN--VGDFS-----DFFQQLFGGRGGFGGF-------GDLFGSVGRRARKGR 130
CbpA COG2214
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
1-67 6.01e-25

Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];


Pssm-ID: 441816 [Multi-domain]  Cd Length: 91  Bit Score: 95.17  E-value: 6.01e-25
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1839619182   1 MVEYYQVLGVRRESSADDIKKAYRKLALKWHPDKNPENKDEAEKKFKELSEAYEVLSDVNKRSLYDR 67
Cdd:COG2214     4 LKDHYAVLGVPPDASLEEIRQAYRRLAKLLHPDRGGELKALAEELFQRLNEAYEVLSDPERRAEYDR 70
PTZ00037 PTZ00037
DnaJ_C chaperone protein; Provisional
 3-109 1.05e-23

DnaJ_C chaperone protein; Provisional


Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 99.12  E-value: 1.05e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1839619182   3 EYYQVLGVRRESSADDIKKAYRKLALKWHPDK--NPEnkdeaekKFKELSEAYEVLSDVNKRSLYDRYGKEGLTGNNGGr 80
Cdd:PTZ00037   29 KLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKggDPE-------KFKEISRAYEVLSDPEKRKIYDEYGEEGLEGGEQP- 100

                          90       100
                  ....*....|....*....|....*....
gi 1839619182  81 gghfhngnhfqepftfRNPDDVFREFFGG 109
Cdd:PTZ00037  101 ----------------ADASDLFDLIFGG 113
PRK14279 PRK14279
molecular chaperone DnaJ;
3-140 1.42e-22

molecular chaperone DnaJ;


Pssm-ID: 237655 [Multi-domain]  Cd Length: 392  Bit Score: 95.57  E-value: 1.42e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1839619182   3 EYYQVLGVRRESSADDIKKAYRKLALKWHPDKNPENKdEAEKKFKELSEAYEVLSDVNKRSLYDR----YGKEGLTGNNG 78
Cdd:PRK14279   10 DFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDP-AAEERFKAVSEAHDVLSDPAKRKEYDEtrrlFAGGGFGGRRF 88

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1839619182  79 GRGGHFHNGNHFQEPFTFrNPDDVFREFFGGRDP-FADFFGAdpfsedPFFSGGRRHHSQRHR 140
Cdd:PRK14279   89 DGGGGFGGFGTGGDGAEF-NLNDLFDAAGRGGGGgIGDLFGG------LFNRGGGSARPSRPR 144
PRK14295 PRK14295
molecular chaperone DnaJ;
3-138 2.20e-22

molecular chaperone DnaJ;


Pssm-ID: 237665 [Multi-domain]  Cd Length: 389  Bit Score: 95.30  E-value: 2.20e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1839619182   3 EYYQVLGVRRESSADDIKKAYRKLALKWHPDKNPENKdEAEKKFKELSEAYEVLSDVNKRSLYDR----YGKEGL-TGNN 77
Cdd:PRK14295   10 DYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDA-KAEERFKEISEAYDVLSDEKKRKEYDEarslFGNGGFrPGPG 88

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1839619182  78 GGRGGHFhngnhfqePFtfrNPDDVF------REFFGGRDPFADFFGAdpfsedPFFSGGRRHHSQR 138
Cdd:PRK14295   89 GGGGGGF--------NF---DLGDLFgggaqgGGGAGGGGGLGDVFGG------LFNRGGRRTQPRR 138
PRK14300 PRK14300
chaperone protein DnaJ; Provisional
 3-142 3.98e-21

chaperone protein DnaJ; Provisional


Pssm-ID: 172788 [Multi-domain]  Cd Length: 372  Bit Score: 91.61  E-value: 3.98e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1839619182   3 EYYQVLGVRRESSADDIKKAYRKLALKWHPDKNpeNKDEAEKKFKELSEAYEVLSDVNKRSLYDRYGKEGLTGNNGGRGG 82
Cdd:PRK14300    4 DYYQILGVSKTASQADLKKAYLKLAKQYHPDTT--DAKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQNQQSRGGG 81

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1839619182  83 HFHNGNHfqepftfrnPD--DVFREFfggrdpFADFFGadpfsedpffsGGRRHHSQRHRSR 142
Cdd:PRK14300   82 GNHGGFH---------PDinDIFGDF------FSDFMG-----------GSRRSRPTSSKVR 117
PRK14287 PRK14287
chaperone protein DnaJ; Provisional
 3-120 4.00e-21

chaperone protein DnaJ; Provisional


Pssm-ID: 237659 [Multi-domain]  Cd Length: 371  Bit Score: 91.61  E-value: 4.00e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1839619182   3 EYYQVLGVRRESSADDIKKAYRKLALKWHPDKNPEnkDEAEKKFKELSEAYEVLSDVNKRSLYDRYGKeglTGNNGGRGG 82
Cdd:PRK14287    5 DYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKA--PDAEDKFKEVKEAYDTLSDPQKKAHYDQFGH---TDPNQGFGG 79

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 1839619182  83 HFHNGnhfqepftFRNPDDVFREFFGG----RDPFADFFGAD 120
Cdd:PRK14287   80 GGAGD--------FGGFSDIFDMFFGGgggrRNPNAPRQGAD 113
PRK14288 PRK14288
molecular chaperone DnaJ;
2-96 6.82e-20

molecular chaperone DnaJ;


Pssm-ID: 172776 [Multi-domain]  Cd Length: 369  Bit Score: 87.82  E-value: 6.82e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1839619182   2 VEYYQVLGVRRESSADDIKKAYRKLALKWHPDKNPENKdEAEKKFKELSEAYEVLSDVNKRSLYDRYGKEGLTgNNGGRG 81
Cdd:PRK14288    3 LSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDK-EAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLN-QAGASQ 80

                          90       100
                  ....*....|....*....|
gi 1839619182  82 GHFHN-----GNHFQEPFTF 96
Cdd:PRK14288   81 SDFSDffedlGSFFEDAFGF 100
PRK10266 PRK10266
curved DNA-binding protein;
3-142 4.26e-19

curved DNA-binding protein;


Pssm-ID: 182347 [Multi-domain]  Cd Length: 306  Bit Score: 84.87  E-value: 4.26e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1839619182   3 EYYQVLGVRRESSADDIKKAYRKLALKWHPDKNPENkdEAEKKFKELSEAYEVLSDVNKRSLYDRYgKEGLTGNNGGRGG 82
Cdd:PRK10266    5 DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEP--DAEARFKEVAEAWEVLSDEQRRAEYDQL-WQHRNDPQFNRQF 81

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1839619182  83 HFHNGNHF-QEPFtfrnpDDVFREFFGGRdpfadffgadpfsedpffsggRRHHSQRHRSR 142
Cdd:PRK10266   82 QHGDGQSFnAEDF-----DDIFSSIFGQH---------------------ARQSRQRPAAR 116
PRK14296 PRK14296
chaperone protein DnaJ; Provisional
 3-108 3.20e-18

chaperone protein DnaJ; Provisional


Pssm-ID: 237666 [Multi-domain]  Cd Length: 372  Bit Score: 83.46  E-value: 3.20e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1839619182   3 EYYQVLGVRRESSADDIKKAYRKLALKWHPDKNPENkdEAEKKFKELSEAYEVLSDVNKRSLYDRYGKEGLTGNNgGRGG 82
Cdd:PRK14296    5 DYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSP--DAHDKMVEINEAADVLLDKDKRKQYDQFGHAAFDGSS-GFSS 81

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1839619182  83 HFHNgnhFQEPFT------FRNPDDVFREFFG 108
Cdd:PRK14296   82 NFGD---FEDLFSnmgssgFSSFTNIFSDFFG 110
DjlA COG1076
DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];
1-58 5.94e-13

DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440694 [Multi-domain]  Cd Length: 75  Bit Score: 62.51  E-value: 5.94e-13
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1839619182   1 MVEYYQVLGVRRESSADDIKKAYRKLALKWHPDK-----NPENKDEAEKKFKELSEAYEVLSD 58
Cdd:COG1076     3 LDDAFELLGLPPDADDAELKRAYRKLQREHHPDRlaaglPEEEQRLALQKAAAINEAYETLKD 65
PTZ00341 PTZ00341
Ring-infected erythrocyte surface antigen; Provisional
 4-77 1.06e-12

Ring-infected erythrocyte surface antigen; Provisional


Pssm-ID: 173534 [Multi-domain]  Cd Length: 1136  Bit Score: 67.89  E-value: 1.06e-12
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1839619182    4 YYQVLGVRRESSADDIKKAYRKLALKWHPDKNPENkdEAEKKFKELSEAYEVLSDVNKRSLYDRYGKEGLTGNN 77
Cdd:PTZ00341   575 FYDILGVGVNADMKEISERYFKLAENYYPPKRSGN--EGFHKFKKINEAYQILGDIDKKKMYNKFGYDGIKGVN 646
djlA PRK09430
co-chaperone DjlA;
5-56 7.87e-07

co-chaperone DjlA;


Pssm-ID: 236512 [Multi-domain]  Cd Length: 267  Bit Score: 49.04  E-value: 7.87e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1839619182   5 YQVLGVRRESSADDIKKAYRKLALKWHPDK------NPENKDEAEKKFKELSEAYEVL 56
Cdd:PRK09430  203 YKVLGVSESDDDQEIKRAYRKLMSEHHPDKlvakglPPEMMEMAKEKAQEIQAAYELI 260
hscB PRK01356
co-chaperone HscB; Provisional
 1-65 2.51e-06

co-chaperone HscB; Provisional


Pssm-ID: 167217 [Multi-domain]  Cd Length: 166  Bit Score: 46.41  E-value: 2.51e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1839619182   1 MVEYYQVLGVRRESSAD--DIKKAYRKLALKWHPD--KNPENKDEAEKKFKELSEAYEVLSDVNKRSLY 65
Cdd:PRK01356    1 MQNYFQLLGLPQEYNIDlkILEKQYFAMQVKYHPDkaKTLQEKEQNLIIASELNNAYSTLKDALKRAEY 69
ZUO1 COG5269
Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / ...
 2-66 7.37e-06

Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227594 [Multi-domain]  Cd Length: 379  Bit Score: 46.56  E-value: 7.37e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1839619182   2 VEYYQVLGV---RRESSADDIKKAYRKLALKWHPDKNPE----NKDEAekkFKELSEAYEVLSDVNKRSLYD 66
Cdd:COG5269    43 VDLYALLGLskyRTKAIPPQILKAHKKKVYKYHPDKTAAggnkGCDEF---FKLIQKAREVLGDRKLRLQYD 111
PHA03102 PHA03102
Small T antigen; Reviewed
 18-58 1.31e-03

Small T antigen; Reviewed


Pssm-ID: 222986 [Multi-domain]  Cd Length: 153  Bit Score: 38.50  E-value: 1.31e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 1839619182  18 DIKKAYRKLALKWHPDK--NPEnkdeaekKFKELSEAYEVLSD 58
Cdd:PHA03102   23 LMRKAYLRKCLEFHPDKggDEE-------KMKELNTLYKKFRE 58
PHA02624 PHA02624
large T antigen; Provisional
 15-58 2.44e-03

large T antigen; Provisional


Pssm-ID: 222912 [Multi-domain]  Cd Length: 647  Bit Score: 39.20  E-value: 2.44e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 1839619182  15 SADDIKKAYRKLALKWHPDK--NPEnkdeaekKFKELSEAYEVLSD 58
Cdd:PHA02624   26 NLPLMRKAYLRKCKEYHPDKggDEE-------KMKRLNSLYKKLQE 64
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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