|
Name |
Accession |
Description |
Interval |
E-value |
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
349-1133 |
6.68e-38 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 154.56 E-value: 6.68e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 349 MEELQKKLDEEVKKRQKLEPSRVGLERQLEEKAEECHRLQELLERRKGEVQQSSKELQNMKLLLGQEEGLRHG------- 421
Cdd:pfam01576 189 ISDLEERLKKEEKGRQELEKAKRKLEGESTDLQEQIAELQAQIAELRAQLAKKEEELQAALARLEEETAQKNNalkkire 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 422 LEAQVKELQLKLKHSQSPDSGKESLLKDL---LDTRELLEELLEGKQRVEEQLRL-RERELTALKGALKEEVASHDQEVE 497
Cdd:pfam01576 269 LEAQISELQEDLESERAARNKAEKQRRDLgeeLEALKTELEDTLDTTAAQQELRSkREQEVTELKKALEEETRSHEAQLQ 348
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 498 HVRLQY-------QRDTEQLRRSMQDATQDHAALEAE---------------------RQKMSSLVRELQRELEETSEET 549
Cdd:pfam01576 349 EMRQKHtqaleelTEQLEQAKRNKANLEKAKQALESEnaelqaelrtlqqakqdsehkRKKLEGQLQELQARLSESERQR 428
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 550 GHWQSMFQKNKEELRATKQELLQLRMEKEEMEEELGEKMEVLQRDLEQARASTRDTHQVEELKKELRRTQGELKELQAEQ 629
Cdd:pfam01576 429 AELAEKLSKLQSELESVSSLLNEAEGKNIKLSKDVSSLESQLQDTQELLQEETRQKLNLSTRLRQLEDERNSLQEQLEEE 508
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 630 QNQEVTGRHQNQVLEKQLAALR-------------EEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAMVLG 696
Cdd:pfam01576 509 EEAKRNVERQLSTLQAQLSDMKkkleedagtlealEEGKKRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQELDDLLVD 588
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 697 Q-RRATVETTLRETQEEND-------------------------EFRRRILGLEQQLKEARGLAEGGEAVEARLR----- 745
Cdd:pfam01576 589 LdHQRQLVSNLEKKQKKFDqmlaeekaisaryaeerdraeaearEKETRALSLARALEEALEAKEELERTNKQLRaemed 668
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 746 ---------DKVHRLEVEKQQLEEALNAAREE------------------EGNLAAAK----RALEVRLDEAQRGLARLG 794
Cdd:pfam01576 669 lvsskddvgKNVHELERSKRALEQQVEEMKTQleeledelqatedaklrlEVNMQALKaqfeRDLQARDEQGEEKRRQLV 748
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 795 QEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIGDDsklaLQQLQAQMEDYKekarKEVADAQRQ 874
Cdd:pfam01576 749 KQVRELEAELEDERKQRAQAVAAKKKLELDLKELEAQIDAANKGREEAVKQ----LKKLQAQMKDLQ----RELEEARAS 820
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 875 AKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGleqEAENKKRFQDDKARqlksLEEKVSR 954
Cdd:pfam01576 821 RDEILAQSKESEKKLKNLEAELLQLQEDLAASERARRQAQQERDELADEIAS---GASGKSALQDEKRR----LEARIAQ 893
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 955 LEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEGF--QKPSASLSQLE 1032
Cdd:pfam01576 894 LEEELEEEQSNTELLNDRLRKSTLQVEQLTTELAAERSTSQKSESARQQLERQNKELKAKLQEMEGTvkSKFKSSIAALE 973
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1033 SQNQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQIDDERQH---VNDQKDQLTLRVKALKRQVDEAEEEIERLDSLR 1109
Cdd:pfam01576 974 AKIAQLEEQLEQESRERQAANKLVRRTEKKLKEVLLQVEDERRHadqYKDQAEKGNSRMKQLKRQLEEAEEEASRANAAR 1053
|
890 900
....*....|....*....|....
gi 1720405137 1110 KKAQRELEEQHEVNEQLQARIKSL 1133
Cdd:pfam01576 1054 RKLQRELDDATESNESMNREVSTL 1077
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
556-1136 |
1.03e-22 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 105.40 E-value: 1.03e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 556 FQKNKEELRATKQELLQLR-MEKEEMEEELGEKMEVLQRDLEQARASTR-DTHQVEELKKELRRTQGELKELQAEQQNQE 633
Cdd:COG1196 215 YRELKEELKELEAELLLLKlRELEAELEELEAELEELEAELEELEAELAeLEAELEELRLELEELELELEEAQAEEYELL 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 634 vtgrhqnQVLEKQLAALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAMVLGQRRATVETTLRETQEEN 713
Cdd:COG1196 295 -------AELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEAL 367
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 714 DEFRRRILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRALEVRLDEAQRGLARL 793
Cdd:COG1196 368 LEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEA 447
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 794 GQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEqigddsklALQQLQAQMEDYkEKARKEVADAQR 873
Cdd:COG1196 448 AEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLL--------LLLEAEADYEGF-LEGVKAALLLAG 518
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 874 QAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTArldkelLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVS 953
Cdd:COG1196 519 LRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEV------AAAAIEYLKAAKAGRATFLPLDKIRARAALAAAL 592
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 954 RLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEGFQKPSASLSQLES 1033
Cdd:COG1196 593 ARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLA 672
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1034 QNQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQIDDERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQ 1113
Cdd:COG1196 673 ALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEA 752
|
570 580
....*....|....*....|...
gi 1720405137 1114 RELEEQHEVNEQLQARIKSLEKD 1136
Cdd:COG1196 753 LEELPEPPDLEELERELERLERE 775
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
463-1134 |
8.54e-22 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 102.44 E-value: 8.54e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 463 GKQRVEEQLRLRERELTALKGALKEEVASHDqEVEHVRLQYQRDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQREL 542
Cdd:TIGR02168 240 ELEELQEELKEAEEELEELTAELQELEEKLE-ELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQL 318
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 543 EETSEETGHWQSMFQKNKEELRATKQELLQLRMEKEEMEEELGEKMEVLQrDLEQARASTRDthQVEELKKELRRTQGEL 622
Cdd:TIGR02168 319 EELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELE-ELESRLEELEE--QLETLRSKVAQLELQI 395
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 623 KELQAEQQNQEVTGRHQNQVLEKQLAALREEADRGRELEQQNLQLQKTLQQLRQdcEEASKAKVASETEAMVLGQRRATV 702
Cdd:TIGR02168 396 ASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEEL--EELQEELERLEEALEELREELEEA 473
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 703 ETTLRETQEENDEFRRRILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRALEVR 782
Cdd:TIGR02168 474 EQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSGILGVLSELISVDEGYEAAIEAALGGRLQAVVVE 553
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 783 LDEAQRgLARLGQEQQALNRA------LEEEGKQREALRRSKAELEEQKRLLNRTV---DRLNKELEQIGDDSKLA--LQ 851
Cdd:TIGR02168 554 NLNAAK-KAIAFLKQNELGRVtflpldSIKGTEIQGNDREILKNIEGFLGVAKDLVkfdPKLRKALSYLLGGVLVVddLD 632
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 852 QLQAQMEDYKEKARKEVADAQRQAKDWAS---EAEKNSGGLSRlQDELQRLRQALQtsQAERDTARLDKEL--LAQRLQG 926
Cdd:TIGR02168 633 NALELAKKLRPGYRIVTLDGDLVRPGGVItggSAKTNSSILER-RREIEELEEKIE--ELEEKIAELEKALaeLRKELEE 709
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 927 LEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLER 1006
Cdd:TIGR02168 710 LEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEA 789
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1007 QNKDLKTRL-ASSEGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQI--------------- 1070
Cdd:TIGR02168 790 QIEQLKEELkALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIeslaaeieeleelie 869
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1720405137 1071 --DDERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQARIKSLE 1134
Cdd:TIGR02168 870 elESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLE 935
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
332-1133 |
3.30e-21 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 100.52 E-value: 3.30e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 332 QMQPLGALAGQA----ELTRKMEELQK-----KLDEEVKKRQKLEPSRVGLERQLEEKAEECHRLQELLERRKGEVQQSS 402
Cdd:TIGR02168 201 QLKSLERQAEKAerykELKAELRELELallvlRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELE 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 403 KELQNMKLLLGQEEGLRHGLEAQVKELQLKLKHSQSPdsgKESLLKDLLDTRELLEELLEGKQRVEEQLRLRERELTALK 482
Cdd:TIGR02168 281 EEIEELQKELYALANEISRLEQQKQILRERLANLERQ---LEELEAQLEELESKLDELAEELAELEEKLEELKEELESLE 357
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 483 GALKEEVASHdQEVEHVRLQYQRDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQRELEETSEET-GHWQSMFQKNKE 561
Cdd:TIGR02168 358 AELEELEAEL-EELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIeELLKKLEEAELK 436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 562 ELRATKQELLQLRMEKEEMEEELGEKMEVLQRDLEQARAstrdthQVEELKKELRRTQGELKELQAEQQNQEVTGRHQNQ 641
Cdd:TIGR02168 437 ELQAELEELEEELEELQEELERLEEALEELREELEEAEQ------ALDAAERELAQLQARLDSLERLQENLEGFSEGVKA 510
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 642 VLEKQ--------LAALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKA----KVASETEAMVL---GQRRATVETTL 706
Cdd:TIGR02168 511 LLKNQsglsgilgVLSELISVDEGYEAAIEAALGGRLQAVVVENLNAAKKAiaflKQNELGRVTFLpldSIKGTEIQGND 590
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 707 RETQEENDEFRRRILGLEQQLKEARGLAE------------------------------------GGEAVEARLRDKVHR 750
Cdd:TIGR02168 591 REILKNIEGFLGVAKDLVKFDPKLRKALSyllggvlvvddldnalelakklrpgyrivtldgdlvRPGGVITGGSAKTNS 670
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 751 LEVEKQQLEEALNAAREEegnLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNR 830
Cdd:TIGR02168 671 SILERRREIEELEEKIEE---LEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEE 747
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 831 TVDRLNKELEQIgDDSKLALQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAER 910
Cdd:TIGR02168 748 RIAQLSKELTEL-EAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERL 826
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 911 DTARLDKELLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQE 990
Cdd:TIGR02168 827 ESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELREL 906
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 991 RSARQDLECDKISLERQNKDLKTRLASSEgfQKPSASLSQLESQNQLLQERLQAEEREKTVLQStnrKLERRVKELSIQI 1070
Cdd:TIGR02168 907 ESKRSELRRELEELREKLAQLELRLEGLE--VRIDNLQERLSEEYSLTLEEAEALENKIEDDEE---EARRRLKRLENKI 981
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1720405137 1071 dDERQHVN----DQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQ-----HEVNEQLQARIKSL 1133
Cdd:TIGR02168 982 -KELGPVNlaaiEEYEELKERYDFLTAQKEDLTEAKETLEEAIEEIDREARERfkdtfDQVNENFQRVFPKL 1052
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
643-1160 |
3.75e-21 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 100.40 E-value: 3.75e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 643 LEKQLAALREEAD---RGRELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAmvLGQRRATVETTLRETQEENDEFRRR 719
Cdd:COG1196 198 LERQLEPLERQAEkaeRYRELKEELKELEAELLLLKLRELEAELEELEAELEE--LEAELEELEAELAELEAELEELRLE 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 720 ILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRALEVRLDEAQRGLARLGQEQQA 799
Cdd:COG1196 276 LEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEE 355
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 800 LNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIGDDSKLALQQLQAQMEDyKEKARKEVADAQRQAKDWA 879
Cdd:COG1196 356 AEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLER-LERLEEELEELEEALAELE 434
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 880 SEAEKNSGGLSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAENKK---------------RFQDDKARQ 944
Cdd:COG1196 435 EEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAarllllleaeadyegFLEGVKAAL 514
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 945 LKSLEEKVSRLEAELDEEKNTVE---------LLTDRVNRGRDQVDQLRTELMQERSARQD-LECDKISLERQNKDLKTR 1014
Cdd:COG1196 515 LLAGLRGLAGAVAVLIGVEAAYEaaleaalaaALQNIVVEDDEVAAAAIEYLKAAKAGRATfLPLDKIRARAALAAALAR 594
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1015 LASSEGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQIdDERQHVNDQKDQLTLRVKALKRQ 1094
Cdd:COG1196 595 GAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVT-LEGEGGSAGGSLTGGSRRELLAA 673
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1720405137 1095 VDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQARIKSLEKDAWRKASRSAAESALKQEGLSSDEE 1160
Cdd:COG1196 674 LLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLE 739
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
465-962 |
1.24e-20 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 98.47 E-value: 1.24e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 465 QRVEEQLRLRERELTALKGALKEEVASHDQEVEHVRLQYQRDTEQL---RRSMQDATQDHAALEAERQKMSSLVRELQRE 541
Cdd:COG1196 238 EAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELeeaQAEEYELLAELARLEQDIARLEERRRELEER 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 542 LEETSEETGHWQSMFQKNKEELRATKQELLQLRMEKEEMEEELGEKMEVLQRDLEQARASTRdthQVEELKKELRRTQGE 621
Cdd:COG1196 318 LEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEE---ELEELAEELLEALRA 394
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 622 LKELQAEQQNQEVTGRHQNQVLEKQLAALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAMVLGQRRAT 701
Cdd:COG1196 395 AAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAAL 474
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 702 VETTLRETQEENDEFRRRILGLEQQLKEARGLAEGGEAveARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRALEV 781
Cdd:COG1196 475 LEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKA--ALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIV 552
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 782 RLDEAQRGLARLGQEQQALNRA----LEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIGDDSKLALQQLQAQM 857
Cdd:COG1196 553 VEDDEVAAAAIEYLKAAKAGRAtflpLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARL 632
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 858 EDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAENKKRF 937
Cdd:COG1196 633 EAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEA 712
|
490 500
....*....|....*....|....*
gi 1720405137 938 QDDKARQLKSLEEKVSRLEAELDEE 962
Cdd:COG1196 713 EEERLEEELEEEALEEQLEAEREEL 737
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
336-904 |
5.64e-19 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 93.08 E-value: 5.64e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 336 LGALAGQAELTRKMEELQKKLDEevKKRQKLEPSRVGLERQLEEKAEECHRLQELLERRKGEVQQSSKELQNMKLLLGQe 415
Cdd:COG1196 202 LEPLERQAEKAERYRELKEELKE--LEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEE- 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 416 eglrhgLEAQVKELQLKLKHSQSPDSGKESLLKDLLDTRELLEELLEGKQRVEEQLRLRERELTALKGALKEEVASHDQE 495
Cdd:COG1196 279 ------LELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEE 352
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 496 VEHVRLQYQRDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQRELEETSEETGHWQSMFQKNKEELRATKQELLQLRM 575
Cdd:COG1196 353 LEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAE 432
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 576 EKEEMEEELGEKMEVLQRDLEQARASTRDTHQVEELKKELRRTQGELKELQAEQQNQEVtgRHQNQVLEKQLAALREEAD 655
Cdd:COG1196 433 LEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAA--RLLLLLEAEADYEGFLEGV 510
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 656 RGRELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAMV----------------LGQRRATVETTLRETQEENDEFRRR 719
Cdd:COG1196 511 KAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQnivveddevaaaaieyLKAAKAGRATFLPLDKIRARAALAA 590
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 720 ILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRALEVRLDEAQRGLARLGQEQQA 799
Cdd:COG1196 591 ALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRREL 670
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 800 LNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIGDDSKLALQQLQAQMEDYKEKARKEVADAQRQAKDWA 879
Cdd:COG1196 671 LAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEE 750
|
570 580
....*....|....*....|....*..
gi 1720405137 880 SEAEKNSGGLSR--LQDELQRLRQALQ 904
Cdd:COG1196 751 EALEELPEPPDLeeLERELERLEREIE 777
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
312-1135 |
3.42e-17 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 87.43 E-value: 3.42e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 312 REGSSESEASVRRKVSLVLEQMQPLGALAGQAELTRKMEELQKKLDE-----EVKKRQKLEPSRVGLERQLEEKAEECHR 386
Cdd:TIGR02169 176 LEELEEVEENIERLDLIIDEKRQQLERLRREREKAERYQALLKEKREyegyeLLKEKEALERQKEAIERQLASLEEELEK 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 387 LQELLERRKGEVQQSSKELQNMKLL---LGQEEGLRhgLEAQVKELQLKLKHSQSPDSGKESLLKDLLDTRELLEELLEG 463
Cdd:TIGR02169 256 LTEEISELEKRLEEIEQLLEELNKKikdLGEEEQLR--VKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDK 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 464 KQRVEEQLRLRERELTALKGALKEEVASHDQEVEHVRLQYQRDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQRELE 543
Cdd:TIGR02169 334 LLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQE 413
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 544 ETSEETGHWQSMFQKnKEELRATKQELLQLRMEKEEMEEELGEKMEVLQRDLEQARASTRDTHQ-VEELKKELRRTQGEL 622
Cdd:TIGR02169 414 ELQRLSEELADLNAA-IAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEeYDRVEKELSKLQREL 492
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 623 KELQAEQQNQEVTGRHQNQVLE-------------KQLAALREEADRGRELEQQNLQLQ--KTLQQLRQDCEEASKAKVA 687
Cdd:TIGR02169 493 AEAEAQARASEERVRGGRAVEEvlkasiqgvhgtvAQLGSVGERYATAIEVAAGNRLNNvvVEDDAVAKEAIELLKRRKA 572
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 688 SE-------------------TEAMVLG----------QRRATVETTLRETQ-EENDEFRRRILG------LEQQLKEAR 731
Cdd:TIGR02169 573 GRatflplnkmrderrdlsilSEDGVIGfavdlvefdpKYEPAFKYVFGDTLvVEDIEAARRLMGkyrmvtLEGELFEKS 652
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 732 GLAEGG-------EAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRAL 804
Cdd:TIGR02169 653 GAMTGGsraprggILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEE 732
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 805 EEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIgddsKLALQQLQAQMEDYKekarkevadaqrqAKDWASEAEK 884
Cdd:TIGR02169 733 EKLKERLEELEEDLSSLEQEIENVKSELKELEARIEEL----EEDLHKLEEALNDLE-------------ARLSHSRIPE 795
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 885 NSGGLSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKN 964
Cdd:TIGR02169 796 IQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEA 875
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 965 TVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEGfqkpsaSLSQLESQNQLLQErLQA 1044
Cdd:TIGR02169 876 ALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEE------ELSEIEDPKGEDEE-IPE 948
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1045 EEREKTVLQSTNRKLERRVKELsiqidderQHVNdqkdqltlrvkalKRQVDEAEEEIERLDSLRKKAQRELEEQhevnE 1124
Cdd:TIGR02169 949 EELSLEDVQAELQRVEEEIRAL--------EPVN-------------MLAIQEYEEVLKRLDELKEKRAKLEEER----K 1003
|
890
....*....|.
gi 1720405137 1125 QLQARIKSLEK 1135
Cdd:TIGR02169 1004 AILERIEEYEK 1014
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
607-1160 |
3.64e-16 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 84.34 E-value: 3.64e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 607 QVEELKKELRRTQGELkELQAEQQNQEVTGRHQNQVLEKQLAALREEadrgrELEQQNLQLQKTLQQLRQDCEEASKAKV 686
Cdd:TIGR02168 190 RLEDILNELERQLKSL-ERQAEKAERYKELKAELRELELALLVLRLE-----ELREELEELQEELKEAEEELEELTAELQ 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 687 ASETEAMVLGQRRATVETTLRETQEENDEFRRRILGLEQQLKEARglaeggeAVEARLRDKVHRLEVEKQQLEEALNAAR 766
Cdd:TIGR02168 264 ELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILR-------ERLANLERQLEELEAQLEELESKLDELA 336
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 767 EEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIGDDS 846
Cdd:TIGR02168 337 EELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRR 416
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 847 KLALQQLQAQMEDYKEKARKEVadaQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQG 926
Cdd:TIGR02168 417 ERLQQEIEELLKKLEEAELKEL---QAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDS 493
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 927 LEQEAENKKRFQDDKARQLKSLEEK---VSRL------EAELDEEKNTV--ELLTDRVNRGRDQVDQLRTELMQERSARQ 995
Cdd:TIGR02168 494 LERLQENLEGFSEGVKALLKNQSGLsgiLGVLselisvDEGYEAAIEAAlgGRLQAVVVENLNAAKKAIAFLKQNELGRV 573
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 996 D-LECDKISLERQNKDLKTRLASSEGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQIDD-- 1072
Cdd:TIGR02168 574 TfLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLVVDDLDNALELAKKLRPGYRIVTLDgd 653
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1073 ------------------------ERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQ----HEVNE 1124
Cdd:TIGR02168 654 lvrpggvitggsaktnssilerrrEIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELsrqiSALRK 733
|
570 580 590
....*....|....*....|....*....|....*.
gi 1720405137 1125 QLQARIKSLEKDAWRKASRSAAESALKQEGLSSDEE 1160
Cdd:TIGR02168 734 DLARLEAEVEQLEERIAQLSKELTELEAEIEELEER 769
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
342-1010 |
2.29e-14 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 78.64 E-value: 2.29e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 342 QAELTRKMEELQKKldEEVKK----RQKLEPSRVGLERQLEE--KAEECHRLQE---LLERRKGEVQQSSKELQNMKLLL 412
Cdd:PTZ00121 1123 KAEDARKAEEARKA--EDARKaeeaRKAEDAKRVEIARKAEDarKAEEARKAEDakkAEAARKAEEVRKAEELRKAEDAR 1200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 413 GQEEGLRHGLEAQVKELQLKLKHSQSPDSGK-ESLLKDLLDTRELLEELLEGKQRVEEQLRLREreLTALKGALKEEVAS 491
Cdd:PTZ00121 1201 KAEAARKAEEERKAEEARKAEDAKKAEAVKKaEEAKKDAEEAKKAEEERNNEEIRKFEEARMAH--FARRQAAIKAEEAR 1278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 492 HDQEVEhvRLQYQRDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQRELEETSEETGHWQSMFQKNKEELRATKQELL 571
Cdd:PTZ00121 1279 KADELK--KAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAA 1356
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 572 QLRMEKEEMEEELGEKMEVLQRDLEQARASTRDTHQVEELKK---ELRRTQGELKELQAEQQNQEVTGRHQNQVLEKQLA 648
Cdd:PTZ00121 1357 DEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKkaeEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEA 1436
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 649 ALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVAseteamvlgQRRATVETTLRETQEENDEFRRRILGLEQQLK 728
Cdd:PTZ00121 1437 KKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEA---------KKKAEEAKKADEAKKKAEEAKKKADEAKKAAE 1507
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 729 EARGLAEGGEAVEARLRDKVHRLEvEKQQLEEALNAarEEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALeeeg 808
Cdd:PTZ00121 1508 AKKKADEAKKAEEAKKADEAKKAE-EAKKADEAKKA--EEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMAL---- 1580
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 809 KQREALRRSKAELEEQKRLLNRTVDRLNKELEQIGDDSKLALQQLQAQmedykEKARKEVADAQRQAKDWASEAEKnsgg 888
Cdd:PTZ00121 1581 RKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKA-----EEEKKKVEQLKKKEAEEKKKAEE---- 1651
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 889 lSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAENKKRFQDDKARQLKSLEE----KVSRLEAELDEEKN 964
Cdd:PTZ00121 1652 -LKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAeekkKAEELKKAEEENKI 1730
|
650 660 670 680
....*....|....*....|....*....|....*....|....*.
gi 1720405137 965 TVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKD 1010
Cdd:PTZ00121 1731 KAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKE 1776
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
615-1128 |
3.15e-14 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 77.77 E-value: 3.15e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 615 LRRTQGELKELQAEQQNQEVTGRHQN-QVLEKQLAALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAM 693
Cdd:PRK02224 182 LSDQRGSLDQLKAQIEEKEEKDLHERlNGLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERREELETLEAEIE 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 694 VLGQRRATVETTLRETQEENDEFRRRILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLEEAL-------NAAR 766
Cdd:PRK02224 262 DLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLeecrvaaQAHN 341
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 767 EEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIGDDs 846
Cdd:PRK02224 342 EEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREE- 420
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 847 KLALQQLQAQMEDYKEKARKEVADAQR-QAKDWASEAEKNSGGlSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQ 925
Cdd:PRK02224 421 RDELREREAELEATLRTARERVEEAEAlLEAGKCPECGQPVEG-SPHVETIEEDRERVEELEAELEDLEEEVEEVEERLE 499
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 926 GLEQEAENKKRFQddkarqlkSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDK---- 1001
Cdd:PRK02224 500 RAEDLVEAEDRIE--------RLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAeear 571
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1002 ---ISLERQNKDLKTRLASSEGFQKPSASLSQLESQNQLLQERLQA-----EEREKTVLQSTNRKLE------------- 1060
Cdd:PRK02224 572 eevAELNSKLAELKERIESLERIRTLLAAIADAEDEIERLREKREAlaelnDERRERLAEKRERKREleaefdearieea 651
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1720405137 1061 ----RRVKELSIQIDDERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQReLEEQHEVNEQLQA 1128
Cdd:PRK02224 652 redkERAEEYLEQVEEKLDELREERDDLQAEIGAVENELEELEELRERREALENRVEA-LEALYDEAEELES 722
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
338-1136 |
3.18e-13 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 74.72 E-value: 3.18e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 338 ALAGQAELTRKMEELQKKLDEEVKKRQKLEPSRvglerqleEKAEECHRLQELLERRKGevqqsskelqnmKLLLGQEEG 417
Cdd:TIGR02169 175 ALEELEEVEENIERLDLIIDEKRQQLERLRRER--------EKAERYQALLKEKREYEG------------YELLKEKEA 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 418 LRHGLEAQVKELqlklkhsqspdSGKESLLKDLLDTRELLEELLEGKQRVEEQLRLRERELTALKG-ALKEEVASHDQEV 496
Cdd:TIGR02169 235 LERQKEAIERQL-----------ASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQlRVKEKIGELEAEI 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 497 EhvrlQYQRDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQRELEETSEETGHWQSMFQKNKEELRATKQELLQLRME 576
Cdd:TIGR02169 304 A----SLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKE 379
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 577 KEEMEEELGEkmevLQRDLEQArastrdTHQVEELKKELRRTQGELKELQAEQQNQevtgRHQNQVLEKQLAALREEAdr 656
Cdd:TIGR02169 380 FAETRDELKD----YREKLEKL------KREINELKRELDRLQEELQRLSEELADL----NAAIAGIEAKINELEEEK-- 443
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 657 greleqqnlqlqktlqqlrqdcEEASKAKVASETEAMVLGQRRATVETTLRETQEENDEFRRRILGLEQQLKEARGLAE- 735
Cdd:TIGR02169 444 ----------------------EDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARa 501
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 736 ------GGEAVEARLRDK---VHRLEVEKQQLEEALNAAREEEG----------NLAAAKRALEVRLDE----------- 785
Cdd:TIGR02169 502 seervrGGRAVEEVLKASiqgVHGTVAQLGSVGERYATAIEVAAgnrlnnvvveDDAVAKEAIELLKRRkagratflpln 581
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 786 ---AQRGLARLGQEQQALNRAL---EEEGKQREALRRSKAE------LEEQKRLLN--RTVDRLNKELEQI-----GDDS 846
Cdd:TIGR02169 582 kmrDERRDLSILSEDGVIGFAVdlvEFDPKYEPAFKYVFGDtlvvedIEAARRLMGkyRMVTLEGELFEKSgamtgGSRA 661
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 847 KLALQQLQAQMEDYKEKARKEVADAQRQAKDWASEaeknsggLSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQG 926
Cdd:TIGR02169 662 PRGGILFSRSEPAELQRLRERLEGLKRELSSLQSE-------LRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEK 734
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 927 LEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNR-----GRDQVDQLRTELMQERSARQDLECDK 1001
Cdd:TIGR02169 735 LKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDlearlSHSRIPEIQAELSKLEEEVSRIEARL 814
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1002 ISLERQNKDLKTRLASSEgfqkpsASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQI---DDERQHVN 1078
Cdd:TIGR02169 815 REIEQKLNRLTLEKEYLE------KEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALrdlESRLGDLK 888
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*...
gi 1720405137 1079 DQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQARIKSLEKD 1136
Cdd:TIGR02169 889 KERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEI 946
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
697-1134 |
6.81e-13 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 73.15 E-value: 6.81e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 697 QRRATVET--TLRETQEENDEFRRRILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAA 774
Cdd:PRK02224 228 QREQARETrdEADEVLEEHEERREELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDA 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 775 AKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIG---DDSKLALQ 851
Cdd:PRK02224 308 DAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAReavEDRREEIE 387
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 852 QLQAQMEDykekARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQ------------------------ 907
Cdd:PRK02224 388 ELEEEIEE----LRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTARerveeaealleagkcpecgqpveg 463
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 908 ------------------AERDTARLDKELLAQRLQGLEQEAENKKRFQddkarqlkSLEEKVSRLEAELDEEKNTVELL 969
Cdd:PRK02224 464 sphvetieedrerveeleAELEDLEEEVEEVEERLERAEDLVEAEDRIE--------RLEERREDLEELIAERRETIEEK 535
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 970 TDRVNRGRDQVDQLRTELMQERSARQDLECDK-------ISLERQNKDLKTRLASSEGFQKPSASLSQLESQNQLLQERL 1042
Cdd:PRK02224 536 RERAEELRERAAELEAEAEEKREAAAEAEEEAeeareevAELNSKLAELKERIESLERIRTLLAAIADAEDEIERLREKR 615
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1043 QAEEREKTVLQSTNRKLERRVKELSIQIDDER---------------QHVNDQKDQLTLRVKALKRQVDEAEEEIERLDS 1107
Cdd:PRK02224 616 EALAELNDERRERLAEKRERKRELEAEFDEARieearedkeraeeylEQVEEKLDELREERDDLQAEIGAVENELEELEE 695
|
490 500
....*....|....*....|....*..
gi 1720405137 1108 LRKKaQRELEEQHEVNEQLQARIKSLE 1134
Cdd:PRK02224 696 LRER-REALENRVEALEALYDEAEELE 721
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
704-1166 |
2.78e-12 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 71.48 E-value: 2.78e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 704 TTLRETQEENDEFRRR------ILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEkqQLEEALNAAREEEGNLAAAKR 777
Cdd:COG4913 235 DDLERAHEALEDAREQiellepIRELAERYAAARERLAELEYLRAALRLWFAQRRLE--LLEAELEELRAELARLEAELE 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 778 ALEVRLDEAQRglarlgQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIG---DDSKLALQQLQ 854
Cdd:COG4913 313 RLEARLDALRE------ELDELEAQIRGNGGDRLEQLEREIERLERELEERERRRARLEALLAALGlplPASAEEFAALR 386
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 855 AQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTARldkELLAQRLQGLEQE---- 930
Cdd:COG4913 387 AEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSNIPARLLALR---DALAEALGLDEAElpfv 463
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 931 ------AENKKRFQDDKARQLKSL-------EEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTE----------- 986
Cdd:COG4913 464 gelievRPEEERWRGAIERVLGGFaltllvpPEHYAAALRWVNRLHLRGRLVYERVRTGLPDPERPRLDpdslagkldfk 543
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 987 -------LMQERSARQDLEC----------DK-ISLERQNKDLKTRLASseGFQKPSASLSQLESQN----QLLQERLQA 1044
Cdd:COG4913 544 phpfrawLEAELGRRFDYVCvdspeelrrhPRaITRAGQVKGNGTRHEK--DDRRRIRSRYVLGFDNraklAALEAELAE 621
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1045 EEREKTVLQSTNRKLERRVKELSIQ-------------------IDDERQHVNDQKDQLTL---RVKALKRQVDEAEEEI 1102
Cdd:COG4913 622 LEEELAEAEERLEALEAELDALQERrealqrlaeyswdeidvasAEREIAELEAELERLDAssdDLAALEEQLEELEAEL 701
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1720405137 1103 ERLDSLRKKAQRELEEQHEVNEQLQARIKSLEKDAWRKASRSAAESALKQEGLSSDEEFDNVYD 1166
Cdd:COG4913 702 EELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAAALGDAVER 765
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
755-1114 |
3.61e-12 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 71.24 E-value: 3.61e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 755 KQQLEEALNAAREEEGNLAAakraLEVRLDEAQRGLARLGQEQQALNRALE----EEGKQREALRRSKAELEEQKRLLNR 830
Cdd:TIGR02168 171 KERRKETERKLERTRENLDR----LEDILNELERQLKSLERQAEKAERYKElkaeLRELELALLVLRLEELREELEELQE 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 831 TVDRLNKELEQIGDDSKLALQQLQaQMEDYKEKARKEVADAQRQAKDWASEaeknsggLSRLQDELQRLRQALQTSQAER 910
Cdd:TIGR02168 247 ELKEAEEELEELTAELQELEEKLE-ELRLEVSELEEEIEELQKELYALANE-------ISRLEQQKQILRERLANLERQL 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 911 DTARLDKELLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQE 990
Cdd:TIGR02168 319 EELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASL 398
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 991 RSARQDLECDKISLERQNKDLKTrlassegfQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQI 1070
Cdd:TIGR02168 399 NNEIERLEARLERLEDRRERLQQ--------EIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREEL 470
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 1720405137 1071 D---DERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQR 1114
Cdd:TIGR02168 471 EeaeQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSG 517
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
340-1160 |
8.41e-12 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 70.00 E-value: 8.41e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 340 AGQAELTRKMEELQKKLDEEVKKRQKLEPSRVGLERQLEEKAEECHRLQELLERRKGE---------VQQSSKELQNMKL 410
Cdd:pfam02463 162 AAGSRLKRKKKEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLeleeeyllyLDYLKLNEERIDL 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 411 LLGQEEGLRHGLEAQVKELQL---KLKHSQSPDSGKESLLKDLLDTRELLEELLEGKQRVEEQLRLRERELTALKGALKE 487
Cdd:pfam02463 242 LQELLRDEQEEIESSKQEIEKeeeKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEK 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 488 EVASHDQEV----------EHVRLQYQRDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQRELEETSEETGHWQSMFQ 557
Cdd:pfam02463 322 EKKKAEKELkkekeeieelEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKS 401
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 558 KNKEELRATKQELLQLRMEKEEMEEELGEKMEVLQRDLEQARA-STRDTHQVEELKKELRRTQGELKELQAEQQNQEVTG 636
Cdd:pfam02463 402 EEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGkLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVK 481
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 637 RHQNQVLEKQLAALREEADRGRELEQQNLQLQKTLQQLRQDC--EEASKAKVASETEAMVLGQRRATVETTLRETQEEND 714
Cdd:pfam02463 482 LQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRiiSAHGRLGDLGVAVENYKVAISTAVIVEVSATADEVE 561
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 715 EFRRRILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRALEVRLDEAQRGLARLG 794
Cdd:pfam02463 562 ERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKESA 641
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 795 QEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIGDDSKLALQQLQAQMEDYKEKARKEVADAQRQ 874
Cdd:pfam02463 642 KAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEE 721
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 875 AKDWASEAEKNSGGLsRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSR 954
Cdd:pfam02463 722 LLADRVQEAQDKINE-ELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQE 800
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 955 LEAELDEEKNTVELLTDRvnrgRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEgfqkpsaSLSQLESQ 1034
Cdd:pfam02463 801 EELRALEEELKEEAELLE----EEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEE-------EITKEELL 869
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1035 NQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQIDDERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQR 1114
Cdd:pfam02463 870 QELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKE 949
|
810 820 830 840
....*....|....*....|....*....|....*....|....*.
gi 1720405137 1115 ELEEQHEVNEQLQARIKSLEKDAWRKASRSAAESALKQEGLSSDEE 1160
Cdd:pfam02463 950 KEENNKEEEEERNKRLLLAKEELGKVNLMAIEEFEEKEERYNKDEL 995
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
752-1103 |
1.04e-11 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 69.71 E-value: 1.04e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 752 EVEKQQLEEALNAAREEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEG----KQREALRRSKAELEEQKRL 827
Cdd:TIGR02169 169 DRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRREREKAERYQALLKEKREYEGyellKEKEALERQKEAIERQLAS 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 828 LNRTVDRLNKELEQIGDDSKLALQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQ 907
Cdd:TIGR02169 249 LEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLE 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 908 AERDTARLDKELLAQRLQ-------GLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQV 980
Cdd:TIGR02169 329 AEIDKLLAEIEELEREIEeerkrrdKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKREL 408
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 981 DQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEgfqkpsASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLE 1060
Cdd:TIGR02169 409 DRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKA------LEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVE 482
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 1720405137 1061 RRVKELSIQIDDerqhVNDQKDQLTLRVKALKRQVDEAEEEIE 1103
Cdd:TIGR02169 483 KELSKLQRELAE----AEAQARASEERVRGGRAVEEVLKASIQ 521
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
850-1174 |
1.66e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 68.81 E-value: 1.66e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 850 LQQLQAQMEDYKEKARKevadaQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQtsQAERDTARLDKELLAQRLQGLEQ 929
Cdd:COG1196 195 LGELERQLEPLERQAEK-----AERYRELKEELKELEAELLLLKLRELEAELEEL--EAELEELEAELEELEAELAELEA 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 930 EAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNK 1009
Cdd:COG1196 268 ELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELE 347
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1010 DLKTRLASSEG-FQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQIDDERQHVNDQKDQLTLRV 1088
Cdd:COG1196 348 EAEEELEEAEAeLAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELE 427
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1089 KALKRQVDEAEEEIERLDSlRKKAQRELEEQHEVNEQLQARIKS---LEKDAWRKASRSAAESALKQEGLSSDEEFDNVY 1165
Cdd:COG1196 428 EALAELEEEEEEEEEALEE-AAEEEAELEEEEEALLELLAELLEeaaLLEAALAELLEELAEAAARLLLLLEAEADYEGF 506
|
....*....
gi 1720405137 1166 DPSSIASLL 1174
Cdd:COG1196 507 LEGVKAALL 515
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
344-1183 |
2.54e-11 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 68.22 E-value: 2.54e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 344 ELTRKMEELQKKLDEEVKKRQKLEPSRVGLERQLEEKAeecHRLQELLERRKGEVQQSSKELQNMKLLLGQEEGLRHGLE 423
Cdd:pfam15921 114 DLQTKLQEMQMERDAMADIRRRESQSQEDLRNQLQNTV---HELEAAKCLKEDMLEDSNTQIEQLRKMMLSHEGVLQEIR 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 424 AQVKELQlklkhsqsPDSGKESLLKDLLDTRELLEELLEgkqrVEEQLRLRERELTALKG-------ALKEEVASHDQEV 496
Cdd:pfam15921 191 SILVDFE--------EASGKKIYEHDSMSTMHFRSLGSA----ISKILRELDTEISYLKGrifpvedQLEALKSESQNKI 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 497 EHVRLQYQRDTEQLrrsMQDATQDHAALEAERQKMSSLVRELQRELEETSEETGHWQSMFQKNKEELRATKQEllqlrme 576
Cdd:pfam15921 259 ELLLQQHQDRIEQL---ISEHEVEITGLTEKASSARSQANSIQSQLEIIQEQARNQNSMYMRQLSDLESTVSQ------- 328
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 577 keemeeelgekmevLQRDLEQARASTRDthQVEELKKELRRTQGELKELQAEQQNQEVTGRHQNQVLEKQLAALREeadR 656
Cdd:pfam15921 329 --------------LRSELREAKRMYED--KIEELEKQLVLANSELTEARTERDQFSQESGNLDDQLQKLLADLHK---R 389
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 657 GRELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAMVLGQRRATVETTLRETQEENDEFRRRILGLEQQLKEARGLAEG 736
Cdd:pfam15921 390 EKELSLEKEQNKRLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSECQGQMERQMAAIQGKNESLEKVSSLTAQ 469
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 737 GEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQR----- 811
Cdd:pfam15921 470 LESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKERAIEATNAEITKLRSRVDLKLQELQHLKNEGDHLRnvqte 549
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 812 -EALRRSKAELEEQKRLLNRTVDRLNKELEQIGDDSKlALQQLQAQMEdykekarKEVADAQRQAKDWASEAEKNSGGLS 890
Cdd:pfam15921 550 cEALKLQMAEKDKVIEILRQQIENMTQLVGQHGRTAG-AMQVEKAQLE-------KEINDRRLELQEFKILKDKKDAKIR 621
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 891 RLQDELQRLR-QALQTSQAERDTARLDKELLAQRLQGLEQEAENKKrfqddkarQLKSLEEKVSRLEAELDEEKNTVELL 969
Cdd:pfam15921 622 ELEARVSDLElEKVKLVNAGSERLRAVKDIKQERDQLLNEVKTSRN--------ELNSLSEDYEVLKRNFRNKSEEMETT 693
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 970 TDRVNrgrdqvdqlrtelMQERSARQDLECDKISLERQNKDLKTRLASSEGFQK----PSASLSQLESQNQLLQERLQAE 1045
Cdd:pfam15921 694 TNKLK-------------MQLKSAQSELEQTRNTLKSMEGSDGHAMKVAMGMQKqitaKRGQIDALQSKIQFLEEAMTNA 760
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1046 EREKTVLQSTNRKLERRVKELSIQ---IDDERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKaqrelEEQHEV 1122
Cdd:pfam15921 761 NKEKHFLKEEKNKLSQELSTVATEknkMAGELEVLRSQERRLKEKVANMEVALDKASLQFAECQDIIQR-----QEQESV 835
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720405137 1123 NEQLQARIKSLEKDAWRKASRSAAESALKQEGlSSDEEFDNVYDPSSIASLLTESNLQTSS 1183
Cdd:pfam15921 836 RLKLQHTLDVKELQGPGYTSNSSMKPRLLQPA-SFTRTHSNVPSSQSTASFLSHHSRKTNA 895
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
902-1154 |
4.79e-11 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 65.94 E-value: 4.79e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 902 ALQTSQAERDTARLDKELLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVD 981
Cdd:COG4942 14 AAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIA 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 982 QLRTELMQERSARQDLECDKISLERQNKDLktRLASSEGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLER 1061
Cdd:COG4942 94 ELRAELEAQKEELAELLRALYRLGRQPPLA--LLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEA 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1062 RVKELSIQIDDERQhvndqkdqltlRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQARIKSLEKDAWRKA 1141
Cdd:COG4942 172 ERAELEALLAELEE-----------ERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAA 240
|
250
....*....|...
gi 1720405137 1142 SRSAAESALKQEG 1154
Cdd:COG4942 241 ERTPAAGFAALKG 253
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
742-977 |
1.16e-10 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 64.79 E-value: 1.16e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 742 ARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAEL 821
Cdd:COG4942 23 AEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQ 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 822 EEQKRLLNRTVDRLNK--ELEQIGDDSKLALQQLQAQMEDYKEKARKEVADAQRQAKDwasEAEKNSGGLSRLQDELQRL 899
Cdd:COG4942 103 KEELAELLRALYRLGRqpPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLA---ELAALRAELEAERAELEAL 179
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1720405137 900 RQALQTSQAERDTARLDKEllaQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGR 977
Cdd:COG4942 180 LAELEEERAALEALKAERQ---KLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAGFAALKGK 254
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
772-993 |
1.18e-10 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 64.79 E-value: 1.18e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 772 LAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIGD---DSKL 848
Cdd:COG4942 11 LALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAelaELEK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 849 ALQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLE 928
Cdd:COG4942 91 EIAELRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELE 170
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1720405137 929 QEAENKKRFQDDKARQLKSLE-------EKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSA 993
Cdd:COG4942 171 AERAELEALLAELEEERAALEalkaerqKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
465-975 |
2.37e-10 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 65.32 E-value: 2.37e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 465 QRVEEQLRLRERELTALKGALKEEVASHDQEVEHVRLQYQ----RDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQR 540
Cdd:COG4913 294 EAELEELRAELARLEAELERLEARLDALREELDELEAQIRgnggDRLEQLEREIERLERELEERERRRARLEALLAALGL 373
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 541 ELEETSEEtghwqsmFQKNKEELRATKQELLQLRMEKEEMEEELGEKMEVLQRDLEQ---------ARASTRDTHQV--- 608
Cdd:COG4913 374 PLPASAEE-------FAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELREleaeiasleRRKSNIPARLLalr 446
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 609 EELKKELRRTQ------GELKELQAEQQNQE---------------VTGRHQNQVLEkqlaALREEADRGREleQQNLQL 667
Cdd:COG4913 447 DALAEALGLDEaelpfvGELIEVRPEEERWRgaiervlggfaltllVPPEHYAAALR----WVNRLHLRGRL--VYERVR 520
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 668 QKTLQQLRQDCEEAS-------KAKVASETEAMVLGQR--RATVET---------------------TLRETQEENDEFR 717
Cdd:COG4913 521 TGLPDPERPRLDPDSlagkldfKPHPFRAWLEAELGRRfdYVCVDSpeelrrhpraitragqvkgngTRHEKDDRRRIRS 600
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 718 RRILG---------LEQQLKEARGLAEGGEAVEARLRDKVHRLEvEKQQLEEALNAAREEEGNLAAAKRALE------VR 782
Cdd:COG4913 601 RYVLGfdnraklaaLEAELAELEEELAEAEERLEALEAELDALQ-ERREALQRLAEYSWDEIDVASAEREIAeleaelER 679
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 783 LDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIGDDSKLALQQLQAQMedYKE 862
Cdd:COG4913 680 LDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEER--FAA 757
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 863 KARKEVadAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQtSQAERDTARLDKELLA-----QRLQGLEQE--AENKK 935
Cdd:COG4913 758 ALGDAV--ERELRENLEERIDALRARLNRAEEELERAMRAFN-REWPAETADLDADLESlpeylALLDRLEEDglPEYEE 834
|
570 580 590 600
....*....|....*....|....*....|....*....|
gi 1720405137 936 RFQDdkaRQLKSLEEKVSRLEAELDEEKNTVELLTDRVNR 975
Cdd:COG4913 835 RFKE---LLNENSIEFVADLLSKLRRAIREIKERIDPLND 871
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
343-1119 |
4.96e-10 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 64.22 E-value: 4.96e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 343 AELTRKMEELQKKLDEEVKKRQKLEPSRVGLERQLEEKAEECHRLQELLERRKGEVQQSSKELQNMKLLLGQEEGLRHGL 422
Cdd:pfam02463 198 QELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEE 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 423 EAQVKELQLKLKHSQSPdsgKESLLKDLLDTRELLEELLEGKQRVEEQLRLRERELTALKGALKEEvashdqevEHVRLQ 502
Cdd:pfam02463 278 EKEKKLQEEELKLLAKE---EEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKEKEEIEEL--------EKELKE 346
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 503 YQRDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQRELEETSEETGHWQSMFQKNKEELRATKQELLQLRMEKEEMEE 582
Cdd:pfam02463 347 LEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKK 426
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 583 ELGEKMEVLQRDLEQARAS-TRDTHQVEELKKELRRTQGELKELQAEQQNQEVTGRHQNQVLEKQLAALREEADRGRELE 661
Cdd:pfam02463 427 EELEILEEEEESIELKQGKlTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKAR 506
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 662 QQNLQLQKTLQQLRQDC--EEASKAKVASETEAMVLGQRRATVETTLRETQEENDEFRRRILGLEQQLKEARGLAEGGEA 739
Cdd:pfam02463 507 SGLKVLLALIKDGVGGRiiSAHGRLGDLGVAVENYKVAISTAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLIPK 586
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 740 VEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAA-------KRALEVRLDEAQRGLARLGQEQQALNRALEEEGK--Q 810
Cdd:pfam02463 587 LKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAkvvegilKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEvkA 666
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 811 REALRRSKAELEEQKRLLNRTVDRLNKELEQIGDDSKLALQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLS 890
Cdd:pfam02463 667 SLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKID 746
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 891 RLQDELQRLRQALQTSQAER-----DTARLDKELLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNT 965
Cdd:pfam02463 747 EEEEEEEKSRLKKEEKEEEKselslKEKELAEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQ 826
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 966 VELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEGFQKPSASLSQLESQNQLLQERLQAE 1045
Cdd:pfam02463 827 EEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEES 906
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1046 EREKTVLQSTNRKLERRVKELSIQIDDERQHVND-------------------QKDQLTLRVKALKRQVD---------- 1096
Cdd:pfam02463 907 QKLNLLEEKENEIEERIKEEAEILLKYEEEPEELlleeadekekeennkeeeeERNKRLLLAKEELGKVNlmaieefeek 986
|
810 820
....*....|....*....|....*...
gi 1720405137 1097 -----EAEEEIERLDSLRKKAQRELEEQ 1119
Cdd:pfam02463 987 eerynKDELEKERLEEEKKKLIRAIIEE 1014
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
346-1176 |
7.53e-10 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 63.66 E-value: 7.53e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 346 TRKMEELQKKLDEEVK-----------------KRQKLEPSRVGLERQLEEKAEECHRLQELLERRKGEVQQSSKELQNM 408
Cdd:pfam01576 1 TRQEEEMQAKEEELQKvkerqqkaeselkelekKHQQLCEEKNALQEQLQAETELCAEAEEMRARLAARKQELEEILHEL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 409 KLLLGQEEGLRHGLEAQVKELQLKLK----HSQSPDSGKESLLKDLLDTRELLEELLEGKQRVEEQLRLRERELTALKGA 484
Cdd:pfam01576 81 ESRLEEEEERSQQLQNEKKKMQQHIQdleeQLDEEEAARQKLQLEKVTTEAKIKKLEEDILLLEDQNSKLSKERKLLEER 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 485 LKEEVASHDQEVEHV------RLQYQRDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQRELEETSEETGHWQSMFQK 558
Cdd:pfam01576 161 ISEFTSNLAEEEEKAkslsklKNKHEAMISDLEERLKKEEKGRQELEKAKRKLEGESTDLQEQIAELQAQIAELRAQLAK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 559 NKEELRATKQELLQ---LRMEKEEMEEELGEKMEVLQRDLEQARAS-TRDTHQVEELKKELRRTQGELKE-LQAEQQNQE 633
Cdd:pfam01576 241 KEEELQAALARLEEetaQKNNALKKIRELEAQISELQEDLESERAArNKAEKQRRDLGEELEALKTELEDtLDTTAAQQE 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 634 VTGRHQNQVLEKQLAALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAMVLGQRRATVETTLRETQEEN 713
Cdd:pfam01576 321 LRSKREQEVTELKKALEEETRSHEAQLQEMRQKHTQALEELTEQLEQAKRNKANLEKAKQALESENAELQAELRTLQQAK 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 714 DEFRRRILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRALEVRLDEAQRGLARL 793
Cdd:pfam01576 401 QDSEHKRKKLEGQLQELQARLSESERQRAELAEKLSKLQSELESVSSLLNEAEGKNIKLSKDVSSLESQLQDTQELLQEE 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 794 GQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEqigdDSKLALQQLQA---QMEDYKEKARKEVAD 870
Cdd:pfam01576 481 TRQKLNLSTRLRQLEDERNSLQEQLEEEEEAKRNVERQLSTLQAQLS----DMKKKLEEDAGtleALEEGKKRLQRELEA 556
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 871 AQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQ-----TSQAERDTARLDkellaqrlQGLEQEAENKKRFQDDKARQL 945
Cdd:pfam01576 557 LTQQLEEKAAAYDKLEKTKNRLQQELDDLLVDLDhqrqlVSNLEKKQKKFD--------QMLAEEKAISARYAEERDRAE 628
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 946 KSLEEKVSR---LEAELDEEKNTVELLtDRVNRgrdqvdQLRTELMQERSARQD-------LECDKISLERQNKDLKTRL 1015
Cdd:pfam01576 629 AEAREKETRalsLARALEEALEAKEEL-ERTNK------QLRAEMEDLVSSKDDvgknvheLERSKRALEQQVEEMKTQL 701
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1016 ASSEG-FQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRK-LERRVKELSIQIDDERQH---VNDQKDQLTLRVKA 1090
Cdd:pfam01576 702 EELEDeLQATEDAKLRLEVNMQALKAQFERDLQARDEQGEEKRRqLVKQVRELEAELEDERKQraqAVAAKKKLELDLKE 781
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1091 LKRQV-------DEAEEEIERLDSLRKKAQRELEEQHEVNEQLQA-------RIKSLEKDAWR-KASRSAAESALKQEGL 1155
Cdd:pfam01576 782 LEAQIdaankgrEEAVKQLKKLQAQMKDLQRELEEARASRDEILAqskesekKLKNLEAELLQlQEDLAASERARRQAQQ 861
|
890 900
....*....|....*....|.
gi 1720405137 1156 SSDEEFDNVYDPSSIASLLTE 1176
Cdd:pfam01576 862 ERDELADEIASGASGKSALQD 882
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
508-1105 |
9.58e-10 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 63.01 E-value: 9.58e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 508 EQLRRSMQDATQDHAALEAERQKMSSL--VRELQRELEETSEETGHWQSMFQKNKEELRATKQELLQLRMEKeemeeelg 585
Cdd:COG4913 228 DALVEHFDDLERAHEALEDAREQIELLepIRELAERYAAARERLAELEYLRAALRLWFAQRRLELLEAELEE-------- 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 586 ekmevLQRDLEQARASTRdthQVEELKKELRRTQGELKELQAEQQNQEVtgrhqnQVLEKQLAALREEADRGRELEQQNL 665
Cdd:COG4913 300 -----LRAELARLEAELE---RLEARLDALREELDELEAQIRGNGGDRL------EQLEREIERLERELEERERRRARLE 365
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 666 qlqktlqqlrqdcEEASKAKVASETEAMVLGQRRATVETTLRETQEENDEFRRRILGLEQQLKEARGLAEGGEAVEARLR 745
Cdd:COG4913 366 -------------ALLAALGLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLE 432
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 746 DKVHRLEVEKQQLEEALNAA-REEEGNLAAAKRALEVRLDEAQ---------RGLA-RLGQEQQALNRALE--EEGKQRE 812
Cdd:COG4913 433 RRKSNIPARLLALRDALAEAlGLDEAELPFVGELIEVRPEEERwrgaiervlGGFAlTLLVPPEHYAAALRwvNRLHLRG 512
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 813 ALRRSKAELEEQKRLLNRTVDR----------------LNKELEQIGD----DSKLALQQ------LQAQMedYKEKARK 866
Cdd:COG4913 513 RLVYERVRTGLPDPERPRLDPDslagkldfkphpfrawLEAELGRRFDyvcvDSPEELRRhpraitRAGQV--KGNGTRH 590
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 867 EVADAQRQAKDW---ASEAEKnsggLSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAENKKRFQDdkar 943
Cdd:COG4913 591 EKDDRRRIRSRYvlgFDNRAK----LAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEID---- 662
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 944 qLKSLEEKVSRLEAELdeekntvelltDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLAssegfqk 1023
Cdd:COG4913 663 -VASAEREIAELEAEL-----------ERLDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELE------- 723
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1024 psaslsQLESQNQLLQERLQAEEREKTVLQSTNrkLERRVKELsiqidDERQHVNDQKDQLTLRVKALKRQVDEAEEEIE 1103
Cdd:COG4913 724 ------QAEEELDELQDRLEAAEDLARLELRAL--LEERFAAA-----LGDAVERELRENLEERIDALRARLNRAEEELE 790
|
..
gi 1720405137 1104 RL 1105
Cdd:COG4913 791 RA 792
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
780-1149 |
1.26e-09 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 62.78 E-value: 1.26e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 780 EVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELeqigddsklaLQQLQAqMED 859
Cdd:TIGR02169 169 DRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRREREKAERYQALLKEKREYEGYEL----------LKEKEA-LER 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 860 YKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTArldkelLAQRLQGLEQEAENKKRFQD 939
Cdd:TIGR02169 238 QKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLR------VKEKIGELEAEIASLERSIA 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 940 DKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASse 1019
Cdd:TIGR02169 312 EKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKD-- 389
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1020 gfqkpsaslsqlesqnqlLQERLQAEEREKTVLQSTNRKLERRVKELSIQIDDERQHVNDQKDQLTlrvkALKRQVDEAE 1099
Cdd:TIGR02169 390 ------------------YREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKIN----ELEEEKEDKA 447
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 1720405137 1100 EEI-------ERLDSLRKKAQRELEEQHEVNEQLQARIKSLEKD-AWRKASRSAAESA 1149
Cdd:TIGR02169 448 LEIkkqewklEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRElAEAEAQARASEER 505
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
687-1129 |
1.27e-09 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 62.63 E-value: 1.27e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 687 ASETEAMVLGQRRATVETTLRETQEENDEFRRRILGLEQQLKEARG--LAEGGEAVEarlrdkvhRLEVEKQQLEEALNA 764
Cdd:COG4913 285 FAQRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAqiRGNGGDRLE--------QLEREIERLERELEE 356
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 765 AREEEGNLAAAKRALEVRLDEAQRGLARLgqeQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEqigd 844
Cdd:COG4913 357 RERRRARLEALLAALGLPLPASAEEFAAL---RAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIA---- 429
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 845 dsklALQQLQAQMEDYKEKARKEVADA-----------------QRQAKDWASEAEK--NSGGLSRLQDELQ-------- 897
Cdd:COG4913 430 ----SLERRKSNIPARLLALRDALAEAlgldeaelpfvgelievRPEEERWRGAIERvlGGFALTLLVPPEHyaaalrwv 505
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 898 ---RLRQALQTSQAERDTARLD------------------------KELLAQR--------LQGLEQEA----------E 932
Cdd:COG4913 506 nrlHLRGRLVYERVRTGLPDPErprldpdslagkldfkphpfrawlEAELGRRfdyvcvdsPEELRRHPraitragqvkG 585
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 933 NKKRFQDDK--------------ARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTeLMQERSARQDLE 998
Cdd:COG4913 586 NGTRHEKDDrrrirsryvlgfdnRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQR-LAEYSWDEIDVA 664
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 999 cdkiSLERQNKDLKTRLASsegFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKelsiQIDDERQHVN 1078
Cdd:COG4913 665 ----SAEREIAELEAELER---LDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELE----QAEEELDELQ 733
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|.
gi 1720405137 1079 DQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQAR 1129
Cdd:COG4913 734 DRLEAAEDLARLELRALLEERFAAALGDAVERELRENLEERIDALRARLNR 784
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
386-1135 |
2.14e-09 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 61.99 E-value: 2.14e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 386 RLQELLERRKGEVQQSSKELQNMKLLLGQEEGLRHGLEAQVKELQLKLKHSQSPDSGKESL---LKDLLDTRELLEELLE 462
Cdd:TIGR00606 190 TLRQVRQTQGQKVQEHQMELKYLKQYKEKACEIRDQITSKEAQLESSREIVKSYENELDPLknrLKEIEHNLSKIMKLDN 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 463 GKQRVEEQLRLRERELTALKGALKEEVASHDQEVEHVRLQYQRDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQREL 542
Cdd:TIGR00606 270 EIKALKSRKKQMEKDNSELELKMEKVFQGTDEQLNDLYHNHQRTVREKERELVDCQRELEKLNKERRLLNQEKTELLVEQ 349
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 543 EETS--EETGHWQSMFQKNKEELRATKQELLQLRMEKEEMEEELGEKMEVLQRDLEQARASTRDthqVEELKKELRRTQG 620
Cdd:TIGR00606 350 GRLQlqADRHQEHIRARDSLIQSLATRLELDGFERGPFSERQIKNFHTLVIERQEDEAKTAAQL---CADLQSKERLKQE 426
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 621 ELKELQAEQQNQEVTGRHQNQVLEKQLAALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVASETEA-----MVL 695
Cdd:TIGR00606 427 QADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQLEGSSDRILELDQELRKAERELSKAEKNSLTETlkkevKSL 506
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 696 GQRRATVETTLRETQEENDEFRRRILGLEQQLKEARGLAEGGEaveaRLRDKVHRLEVE----------KQQLEEALNAA 765
Cdd:TIGR00606 507 QNEKADLDRKLRKLDQEMEQLNHHTTTRTQMEMLTKDKMDKDE----QIRKIKSRHSDEltsllgyfpnKKQLEDWLHSK 582
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 766 REEegnlaaaKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLlNRTVDRLNKELEQIGDD 845
Cdd:TIGR00606 583 SKE-------INQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKLFDVCGSQDE-ESDLERLKEEIEKSSKQ 654
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 846 SKLaLQQLQAQMEDYKEKARKE------VADAQRQAKDWASEAEKNSGGLSRL-QDELQRLRQALQTSQAERDTARLDKE 918
Cdd:TIGR00606 655 RAM-LAGATAVYSQFITQLTDEnqsccpVCQRVFQTEAELQEFISDLQSKLRLaPDKLKSTESELKKKEKRRDEMLGLAP 733
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 919 LLAQRLQGLEQEA----ENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDR--VNRGRDQVDQLRTELMQERS 992
Cdd:TIGR00606 734 GRQSIIDLKEKEIpelrNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVtiMERFQMELKDVERKIAQQAA 813
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 993 ARQ----DLECDKISLERQNKDLKTRLASSEGFQKPSASLSQLEsQNQLLQERLQAEEREKTVLQST---NRKLERRVKE 1065
Cdd:TIGR00606 814 KLQgsdlDRTVQQVNQEKQEKQHELDTVVSKIELNRKLIQDQQE-QIQHLKSKTNELKSEKLQIGTNlqrRQQFEEQLVE 892
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1066 LSIQIDDERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQARIKSLEK 1135
Cdd:TIGR00606 893 LSTEVQSLIREIKDAKEQDSPLETFLEKDQQEKEELISSKETSNKKAQDKVNDIKEKVKNIHGYMKDIEN 962
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
331-945 |
2.67e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 62.08 E-value: 2.67e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 331 EQMQPLGALAGQAELTRKMEELQKKLDEEVKK----RQKLEPSRVGLERQLEEKAEECHRLQELLERRKGEVQQSSKELQ 406
Cdd:PTZ00121 1299 EEKKKADEAKKKAEEAKKADEAKKKAEEAKKKadaaKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKK 1378
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 407 NMKLLLGQEEGLRHGLEAQVKELQLKLKHSQSPDSGKESLLKDLLDTRELLEEL-LEGKQRVEEQLRLRERELTALKGAL 485
Cdd:PTZ00121 1379 KADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKaDEAKKKAEEAKKADEAKKKAEEAKK 1458
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 486 KEEVASHDQEvehvrlqyQRDTEQLRRSMQDATQ-DHAALEAERQKMSSlvRELQRELEETSEETGHWQSMFQKNKEELR 564
Cdd:PTZ00121 1459 AEEAKKKAEE--------AKKADEAKKKAEEAKKaDEAKKKAEEAKKKA--DEAKKAAEAKKKADEAKKAEEAKKADEAK 1528
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 565 AT--KQELLQLRMEKEEMEEELGEKMEVLQ-----RDLEQARASTRDTHQVEELKKELRRTQGELKELQAEQQNQEVTGR 637
Cdd:PTZ00121 1529 KAeeAKKADEAKKAEEKKKADELKKAEELKkaeekKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMK 1608
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 638 HQNQVLEKQLAALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAMVLGQRRATVETTLRETQEENDEFR 717
Cdd:PTZ00121 1609 AEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEK 1688
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 718 RRILGLEQQLKEARGLAE--GGEAVEARLRDKVHRLEVEKQQLEEALNAAREEEgnlaaAKRALEVRLDEAQRGlaRLGQ 795
Cdd:PTZ00121 1689 KAAEALKKEAEEAKKAEElkKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEED-----KKKAEEAKKDEEEKK--KIAH 1761
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 796 EQQALNRALEEEGKQREALrrSKAELEEQKRLLNRTVDRLNKELEQIGDDSKLALQQLQAQMEDYKE---KARKEVADAQ 872
Cdd:PTZ00121 1762 LKKEEEKKAEEIRKEKEAV--IEEELDEEDEKRRMEVDKKIKDIFDNFANIIEGGKEGNLVINDSKEmedSAIKEVADSK 1839
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1720405137 873 RQAKDWASEAEKNSGGLSRLQDElqrlrqalqTSQAERDTARlDKELLAQRLQGLEQEAENKKRFQDDKARQL 945
Cdd:PTZ00121 1840 NMQLEEADAFEKHKFNKNNENGE---------DGNKEADFNK-EKDLKEDDEEEIEEADEIEKIDKDDIEREI 1902
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
610-1135 |
7.42e-09 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 60.08 E-value: 7.42e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 610 ELKKELRRTQGELKELQAEQQNQEVTGRHQNQVLEKQLAALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVASE 689
Cdd:PRK03918 169 EVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEKELE 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 690 TeamvLGQRRATVETTLRETQEENDEFRRRILGLEQQLKEARGLAEGGEAVEarlrdkvhRLEVEKQQLEEALNAAREEE 769
Cdd:PRK03918 249 S----LEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKEKAEEYI--------KLSEFYEEYLDELREIEKRL 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 770 GNLAAAKRALEVRLDEAQRglarlgqeqqaLNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKeleqigddskla 849
Cdd:PRK03918 317 SRLEEEINGIEERIKELEE-----------KEERLEELKKKLKELEKRLEELEERHELYEEAKAKKEE------------ 373
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 850 LQQLQAQMEDY-KEKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQtsqaerdtaRLDKELLAQRLQGLE 928
Cdd:PRK03918 374 LERLKKRLTGLtPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIE---------ELKKAKGKCPVCGRE 444
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 929 QEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRdQVDQLRTELMQERSARQDLEcdKISLERQN 1008
Cdd:PRK03918 445 LTEEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKES-ELIKLKELAEQLKELEEKLK--KYNLEELE 521
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1009 KDLKTRLASSEGFQKPSASLSQLESQnqllQERLQAEEREKTVLQSTNRKLERRVKELSIQIddeRQHVNDQKDQLTLRV 1088
Cdd:PRK03918 522 KKAEEYEKLKEKLIKLKGEIKSLKKE----LEKLEELKKKLAELEKKLDELEEELAELLKEL---EELGFESVEELEERL 594
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|...
gi 1720405137 1089 KALKRQVDE------AEEEIERLDSLRKKAQRELEEQHEVNEQLQARIKSLEK 1135
Cdd:PRK03918 595 KELEPFYNEylelkdAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRK 647
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
708-1153 |
1.75e-08 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 58.92 E-value: 1.75e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 708 ETQEENDEFRRRILGLEQQLKEARGLAEggeaVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRAL------EV 781
Cdd:PRK03918 142 ESDESREKVVRQILGLDDYENAYKNLGE----VIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREIneisseLP 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 782 RLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIGDDSK---------LALQQ 852
Cdd:PRK03918 218 ELREELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKelkelkekaEEYIK 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 853 LQAQMEDYKEKARK----------EVADAQRQAKDwASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTAR-------- 914
Cdd:PRK03918 298 LSEFYEEYLDELREiekrlsrleeEINGIEERIKE-LEEKEERLEELKKKLKELEKRLEELEERHELYEEAKakkeeler 376
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 915 LDKELLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNR----GRDQVDQLRTELMQE 990
Cdd:PRK03918 377 LKKRLTGLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKcpvcGRELTEEHRKELLEE 456
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 991 RSAR-QDLECDKISLERQNKDLKTRLASSEGFQKPSASLSQLESQNQLLQErlQAEEREKTVLQSTNRKLE--RRVKELS 1067
Cdd:PRK03918 457 YTAElKRIEKELKEIEEKERKLRKELRELEKVLKKESELIKLKELAEQLKE--LEEKLKKYNLEELEKKAEeyEKLKEKL 534
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1068 IQIDDERQHVNDQKDqltlRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQ-HEVNEQLQARIKSLEKDAWRKASRSAA 1146
Cdd:PRK03918 535 IKLKGEIKSLKKELE----KLEELKKKLAELEKKLDELEEELAELLKELEELgFESVEELEERLKELEPFYNEYLELKDA 610
|
....*..
gi 1720405137 1147 ESALKQE 1153
Cdd:PRK03918 611 EKELERE 617
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
920-1134 |
2.21e-08 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 58.49 E-value: 2.21e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 920 LAQRLQGLEQEAENKKRFQDDkarQLKSLEEKVSRLEAELDE--EKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDL 997
Cdd:COG3206 162 LEQNLELRREEARKALEFLEE---QLPELRKELEEAEAALEEfrQKNGLVDLSEEAKLLLQQLSELESQLAEARAELAEA 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 998 ECDKISLERQ---NKDLKTRLASSEGFQKPSASLSQLESQNQLLQERLQAEEREktvLQSTNRKLERRVKELSIQIDDER 1074
Cdd:COG3206 239 EARLAALRAQlgsGPDALPELLQSPVIQQLRAQLAELEAELAELSARYTPNHPD---VIALRAQIAALRAQLQQEAQRIL 315
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1720405137 1075 QHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKA---QRELEEQHEVNEQLQARIKSLE 1134
Cdd:COG3206 316 ASLEAELEALQAREASLQAQLAQLEARLAELPELEAELrrlEREVEVARELYESLLQRLEEAR 378
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
464-1073 |
2.50e-08 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 58.59 E-value: 2.50e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 464 KQRVEEQLRLRERELTALKgalkEEVASHDQEVEHVRLQYQRDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQRELE 543
Cdd:pfam15921 266 QDRIEQLISEHEVEITGLT----EKASSARSQANSIQSQLEIIQEQARNQNSMYMRQLSDLESTVSQLRSELREAKRMYE 341
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 544 ETSEETGHWQSMFQKNKEELRATKQELLQ---------------LRMEKEEMEEELGEKMEVLQRDLEQARASTRDTHQV 608
Cdd:pfam15921 342 DKIEELEKQLVLANSELTEARTERDQFSQesgnlddqlqklladLHKREKELSLEKEQNKRLWDRDTGNSITIDHLRREL 421
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 609 EELKKELRRTQGELKELQAEQQNQevtgrhqnqvLEKQLAALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVAS 688
Cdd:pfam15921 422 DDRNMEVQRLEALLKAMKSECQGQ----------MERQMAAIQGKNESLEKVSSLTAQLESTKEMLRKVVEELTAKKMTL 491
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 689 ETEAMVLGQRRATVETTLRETQEENDEFRRRILGLEQQLKEARGLAEGGE------------AVEARLRDKVHR------ 750
Cdd:pfam15921 492 ESSERTVSDLTASLQEKERAIEATNAEITKLRSRVDLKLQELQHLKNEGDhlrnvqtecealKLQMAEKDKVIEilrqqi 571
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 751 ----------------LEVEKQQLEEALNAAREEEGNLAAAK-------RALEVRLDEAQRGLARLGQEQQALNRALEEE 807
Cdd:pfam15921 572 enmtqlvgqhgrtagaMQVEKAQLEKEINDRRLELQEFKILKdkkdakiRELEARVSDLELEKVKLVNAGSERLRAVKDI 651
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 808 GKQREAL-------RRSKAELEEQKRLLNRTVDRLNKELEQIGDDSKLALQQLQAQMEDYKEKARK-EVAD--AQRQAKD 877
Cdd:pfam15921 652 KQERDQLlnevktsRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELEQTRNTLKSmEGSDghAMKVAMG 731
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 878 WASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEA 957
Cdd:pfam15921 732 MQKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAGELEVLRSQERRLKEKVANMEV 811
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 958 ELDEEKNTVELLTDRVNRGRDQVDQLRtelMQERSARQDLECDKISlerQNKDLKTRLASSEGFQKPSASLSQLESQNQL 1037
Cdd:pfam15921 812 ALDKASLQFAECQDIIQRQEQESVRLK---LQHTLDVKELQGPGYT---SNSSMKPRLLQPASFTRTHSNVPSSQSTASF 885
|
650 660 670
....*....|....*....|....*....|....*.
gi 1720405137 1038 LQERlqaEEREKTVLQSTNRKLERRVKELSIQIDDE 1073
Cdd:pfam15921 886 LSHH---SRKTNALKEDPTRDLKQLLQELRSVINEE 918
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
508-992 |
3.01e-08 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 58.13 E-value: 3.01e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 508 EQLRRSMQDATQDHAALEAERQKMSSLVRELQRELEETSEETGHWQSMFQKNKEELRATKQELLQLRMEKEEMEEELGEK 587
Cdd:PRK02224 254 ETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEEC 333
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 588 MEVLQRDLEQARASTRDTHQVEELKKELRRTQGELKELQAEQQNQEVTGRHQNQVLEKQLAALREE-ADRGRELEQQnlq 666
Cdd:PRK02224 334 RVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERfGDAPVDLGNA--- 410
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 667 lqktlqqlrqdceEASKAKVASETEAmvLGQRRATVETTLRETQEENDEFRR-----RILGLEQQLKE---ARGLAEGGE 738
Cdd:PRK02224 411 -------------EDFLEELREERDE--LREREAELEATLRTARERVEEAEAlleagKCPECGQPVEGsphVETIEEDRE 475
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 739 AVE------ARLRDKVHRLEVEKQQLEEALNAAREEEgNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQRE 812
Cdd:PRK02224 476 RVEeleaelEDLEEEVEEVEERLERAEDLVEAEDRIE-RLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAE 554
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 813 ALRRSKAELEEQKRLLNRTVDRLNKELEQIGD--DSKLALQQLQAQMEDYKEkarkevaDAQRQAKDWASEAEKNSGGLS 890
Cdd:PRK02224 555 EKREAAAEAEEEAEEAREEVAELNSKLAELKEriESLERIRTLLAAIADAED-------EIERLREKREALAELNDERRE 627
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 891 RLQDELQRLRQALQTSQAER-DTARLDKELLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEaELDEEKNTVELL 969
Cdd:PRK02224 628 RLAEKRERKRELEAEFDEARiEEAREDKERAEEYLEQVEEKLDELREERDDLQAEIGAVENELEELE-ELRERREALENR 706
|
490 500
....*....|....*....|...
gi 1720405137 970 TDRVNRGRDQVDQLRTELMQERS 992
Cdd:PRK02224 707 VEALEALYDEAEELESMYGDLRA 729
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
709-1067 |
3.26e-08 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 58.43 E-value: 3.26e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 709 TQEENDEFRRRILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAREeegNLAAAKRALevrldEAQR 788
Cdd:COG3096 276 HANERRELSERALELRRELFGARRQLAEEQYRLVEMARELEELSARESDLEQDYQAASD---HLNLVQTAL-----RQQE 347
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 789 GLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEqigdDSKLALQQLQAQMEDYKEkARKEV 868
Cdd:COG3096 348 KIERYQEDLEELTERLEEQEEVVEEAAEQLAEAEARLEAAEEEVDSLKSQLA----DYQQALDVQQTRAIQYQQ-AVQAL 422
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 869 ADAQRQAKDWASEAEKNSGGLSRLQDELQR-------LRQALQTSQAER-----------------------DTAR---- 914
Cdd:COG3096 423 EKARALCGLPDLTPENAEDYLAAFRAKEQQateevleLEQKLSVADAARrqfekayelvckiageversqawQTARellr 502
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 915 --LDKELLAQRLQGLEQ---EAENKKRFQDDKARQLKSLEEKVSR-------LEAELDEEKNTVELLTDRVNRGRDQVDQ 982
Cdd:COG3096 503 ryRSQQALAQRLQQLRAqlaELEQRLRQQQNAERLLEEFCQRIGQqldaaeeLEELLAELEAQLEELEEQAAEAVEQRSE 582
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 983 LRTELMQERSARQDLEcDKISLERQNKDLKTRLASSEGfqKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERR 1062
Cdd:COG3096 583 LRQQLEQLRARIKELA-ARAPAWLAAQDALERLREQSG--EALADSQEVTAAMQQLLEREREATVERDELAARKQALESQ 659
|
....*
gi 1720405137 1063 VKELS 1067
Cdd:COG3096 660 IERLS 664
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
339-987 |
3.57e-08 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 57.77 E-value: 3.57e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 339 LAGQAELTRKMEELQKKLDEEVKKRQKLEPsrvgLERQLEEKAEEchrlqelLERRKGEVQQSSKELQNMKLLLGQEEGL 418
Cdd:PRK03918 185 IKRTENIEELIKEKEKELEEVLREINEISS----ELPELREELEK-------LEKEVKELEELKEEIEELEKELESLEGS 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 419 RHGLEAQVKELQLKLKhsqspdsGKESLLKDLldtrelleellegKQRVEEQLRLRERELTALK-GALKEEVASHDQEVE 497
Cdd:PRK03918 254 KRKLEEKIRELEERIE-------ELKKEIEEL-------------EEKVKELKELKEKAEEYIKlSEFYEEYLDELREIE 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 498 HVRLQYQRDTEQLRRSMQDATQDhaalEAERQKMSSLVRELQRELEETSEetghwqsmFQKNKEELRATKQELLQLRMEK 577
Cdd:PRK03918 314 KRLSRLEEEINGIEERIKELEEK----EERLEELKKKLKELEKRLEELEE--------RHELYEEAKAKKEELERLKKRL 381
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 578 EEMEEELgekmevLQRDLEqarastrdthQVEELKKELRRtqgELKELQAEQQNQEVTGRHQNQVLEKQLAALREEADRG 657
Cdd:PRK03918 382 TGLTPEK------LEKELE----------ELEKAKEEIEE---EISKITARIGELKKEIKELKKAIEELKKAKGKCPVCG 442
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 658 RELEqqnlqlqktlqqlrqdcEEASKAKVASETEAMvlgqrrATVETTLRETQEENDEFRRRILGLEQQLKEARGLaegg 737
Cdd:PRK03918 443 RELT-----------------EEHRKELLEEYTAEL------KRIEKELKEIEEKERKLRKELRELEKVLKKESEL---- 495
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 738 eaveARLRDKVHRLEvekqQLEEALNAAREEEgnLAAAKRALEvrldEAQRGLARLGQEQQALNRALEEEgkqrEALRRS 817
Cdd:PRK03918 496 ----IKLKELAEQLK----ELEEKLKKYNLEE--LEKKAEEYE----KLKEKLIKLKGEIKSLKKELEKL----EELKKK 557
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 818 KAELEEQKRLLNRTVDRLNKELEQIG----DDSKLALQQLQAQMEDYKE--KARKEVADAQRQAKDWASEAEKNSGGLSR 891
Cdd:PRK03918 558 LAELEKKLDELEEELAELLKELEELGfesvEELEERLKELEPFYNEYLElkDAEKELEREEKELKKLEEELDKAFEELAE 637
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 892 LQDELQRLR---QALQTSQAERDTARLDKEL--LAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEaELDEEKNTV 966
Cdd:PRK03918 638 TEKRLEELRkelEELEKKYSEEEYEELREEYleLSRELAGLRAELEELEKRREEIKKTLEKLKEELEERE-KAKKELEKL 716
|
650 660
....*....|....*....|.
gi 1720405137 967 ELLTDRVNRGRDQVDQLRTEL 987
Cdd:PRK03918 717 EKALERVEELREKVKKYKALL 737
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
795-1131 |
4.75e-08 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 57.34 E-value: 4.75e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 795 QEQQALNRALEEEGKQREalrRSKAELEEQKRLLNRTVDRLNKELEQIGDDSKlalqqlqaQMEDYKEKARKEVADAQRQ 874
Cdd:TIGR04523 303 QKEQDWNKELKSELKNQE---KKLEEIQNQISQNNKIISQLNEQISQLKKELT--------NSESENSEKQRELEEKQNE 371
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 875 AKDWASEAEKNSGGLSRLQDELQRLRQALQtsQAERDTARLDKEL--LAQRLQGLEQEAENKKRFQDDKARQLKSLEEKV 952
Cdd:TIGR04523 372 IEKLKKENQSYKQEIKNLESQINDLESKIQ--NQEKLNQQKDEQIkkLQQEKELLEKEIERLKETIIKNNSEIKDLTNQD 449
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 953 SRLEAEL-------DEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEGFQKPS 1025
Cdd:TIGR04523 450 SVKELIIknldntrESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKL 529
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1026 AS--------LSQLESQNQLLQERLQAEEREKTV---------LQSTNRKLERRVKELSIQIDDERQHVNDQKDQLTLR- 1087
Cdd:TIGR04523 530 ESekkekeskISDLEDELNKDDFELKKENLEKEIdeknkeieeLKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKe 609
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 1720405137 1088 --VKALKRQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQARIK 1131
Cdd:TIGR04523 610 kkISSLEKELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETIK 655
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
535-957 |
8.03e-08 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 56.70 E-value: 8.03e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 535 VRELQRELEETSEETGHWQsmfqKNKEELRATKQELLQLRMEKEEMEEElgekmevlQRDLEQARASTRDTHQVEELKKE 614
Cdd:COG4717 73 LKELEEELKEAEEKEEEYA----ELQEELEELEEELEELEAELEELREE--------LEKLEKLLQLLPLYQELEALEAE 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 615 LRRTQGELKELQAEQQNQEvTGRHQNQVLEKQLAALREEADRgrELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAMV 694
Cdd:COG4717 141 LAELPERLEELEERLEELR-ELEEELEELEAELAELQEELEE--LLEQLSLATEEELQDLAEELEELQQRLAELEEELEE 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 695 LGQRRATVETTLRETQEENDEFRRR---------------ILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLE 759
Cdd:COG4717 218 AQEELEELEEELEQLENELEAAALEerlkearlllliaaaLLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREK 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 760 EALNAAREEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQkRLLNRTVDRLNKEL 839
Cdd:COG4717 298 ASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEE-LQLEELEQEIAALL 376
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 840 EQIGDDSKLALQQLQAQMEDYKE-KARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTARLDKE 918
Cdd:COG4717 377 AEAGVEDEEELRAALEQAEEYQElKEELEELEEQLEELLGELEELLEALDEEELEEELEELEEELEELEEELEELREELA 456
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 1720405137 919 LLAQRLQGLE--QEAENKKRFQDDKARQLKSLEEKVSRLEA 957
Cdd:COG4717 457 ELEAELEQLEedGELAELLQELEELKAELRELAEEWAALKL 497
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
697-1121 |
2.50e-07 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 55.16 E-value: 2.50e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 697 QRRATVETTLRETQEENDEFRRRILGLEQQLkEARGLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAREeegnlaaaK 776
Cdd:COG4717 95 EELEELEEELEELEAELEELREELEKLEKLL-QLLPLYQELEALEAELAELPERLEELEERLEELRELEEE--------L 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 777 RALEVRLDEAQRGLARLGQEQQALNR-ALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIGDDSKLALQQLQA 855
Cdd:COG4717 166 EELEAELAELQEELEELLEQLSLATEeELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERL 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 856 QMEDYKEKARKEVADAQRQAKDWASEAEKNSG--------------GLSRLQDELQRLRQALQTSQAERDTARLDKELLA 921
Cdd:COG4717 246 KEARLLLLIAAALLALLGLGGSLLSLILTIAGvlflvlgllallflLLAREKASLGKEAEELQALPALEELEEEELEELL 325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 922 QRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQdlecdk 1001
Cdd:COG4717 326 AALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQEIAALLAEAGVEDEEELRAALEQAEEYQE------ 399
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1002 isLERQNKDLKTRLASSEGFQKPSA---SLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQidderqhvn 1078
Cdd:COG4717 400 --LKEELEELEEQLEELLGELEELLealDEEELEEELEELEEELEELEEELEELREELAELEAELEQLEED--------- 468
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 1720405137 1079 DQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQHE 1121
Cdd:COG4717 469 GELAELLQELEELKAELRELAEEWAALKLALELLEEAREEYRE 511
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
525-1147 |
2.91e-07 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 55.07 E-value: 2.91e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 525 EAERQKMSSLVRELQRELEETSEETghwqSMFQKNKEELRATKQELLQLRMEKEEMEEELgekmevlqRDLEQARASTRD 604
Cdd:PRK03918 199 EKELEEVLREINEISSELPELREEL----EKLEKEVKELEELKEEIEELEKELESLEGSK--------RKLEEKIRELEE 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 605 thQVEELKK---ELRRTQGELKELQAEQQNQEVTGRHQNQVLEKqLAALREEADRGRELEQQNLQLQKTLQQLRQDCEEA 681
Cdd:PRK03918 267 --RIEELKKeieELEEKVKELKELKEKAEEYIKLSEFYEEYLDE-LREIEKRLSRLEEEINGIEERIKELEEKEERLEEL 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 682 SKAKVASETEAMVLGQRRATVETtLRETQEENDEFRRRILG-----LEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQ 756
Cdd:PRK03918 344 KKKLKELEKRLEELEERHELYEE-AKAKKEELERLKKRLTGltpekLEKELEELEKAKEEIEEEISKITARIGELKKEIK 422
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 757 QLEEALNAAREEEGNLAAAKRalevRLDEAQRGlarlgqeqqalnRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLN 836
Cdd:PRK03918 423 ELKKAIEELKKAKGKCPVCGR----ELTEEHRK------------ELLEEYTAELKRIEKELKEIEEKERKLRKELRELE 486
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 837 KELEQIGDDSKL--ALQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLrQALQTSqaerdtar 914
Cdd:PRK03918 487 KVLKKESELIKLkeLAEQLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKL-EELKKK-------- 557
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 915 ldKELLAQRLQGLEQE-AENKKRFQDDKARQLKSLEEKVSRLEaELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSA 993
Cdd:PRK03918 558 --LAELEKKLDELEEElAELLKELEELGFESVEELEERLKELE-PFYNEYLELKDAEKELEREEKELKKLEEELDKAFEE 634
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 994 RQDLECDKISLERQNKDLKtRLASSEGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELsiqidde 1073
Cdd:PRK03918 635 LAETEKRLEELRKELEELE-KKYSEEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEER------- 706
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1720405137 1074 rqhvndqkdqltlrvkalkrqvDEAEEEIERLdslrKKAQRELEEQHEVNEQLQArikSLEKDAWRKASRSAAE 1147
Cdd:PRK03918 707 ----------------------EKAKKELEKL----EKALERVEELREKVKKYKA---LLKERALSKVGEIASE 751
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
343-1135 |
5.01e-07 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 54.21 E-value: 5.01e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 343 AELTRKMEELQKKLDEEVKKRQKLEPSRVGLERQLEEKAEECHRLQELLERRKGEVQQSSKELQNMKLLLGQEEGLRH-- 420
Cdd:pfam02463 236 EERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEek 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 421 --GLEAQVKELQLKLKHSQSPDSGKESLLKDLLDTRELLEELLEGKQRVEEQLRLRERELTALKG----ALKEEVASHDQ 494
Cdd:pfam02463 316 lkESEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKleseRLSSAAKLKEE 395
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 495 EVEHVRLQYQRDTEQLRRSMQDATqdhaALEAERQKMSSLVRELQRELEETSEEtghwQSMFQKNKEELRATKQELLQLR 574
Cdd:pfam02463 396 ELELKSEEEKEAQLLLELARQLED----LLKEEKKEELEILEEEEESIELKQGK----LTEEKEELEKQELKLLKDELEL 467
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 575 MEKEEMEEELGEKMEVLQRDLEQARAstrdthQVEELKKELRRTQGELKELQAEQQNQEVTGRHQNQVLEKQLAALREEA 654
Cdd:pfam02463 468 KKSEDLLKETQLVKLQEQLELLLSRQ------KLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENY 541
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 655 DRGRELEqqnlqlQKTLQQLRQDCEEASKAKVASETEAMVLGQRRATVETTLRETQEENDEFRRRILGLEQQLKEARGLA 734
Cdd:pfam02463 542 KVAISTA------VIVEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEA 615
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 735 EGGEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREAL 814
Cdd:pfam02463 616 DEDDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEIL 695
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 815 RRSKAELEEQKRLLNRTVDRLNKELEQIGDDSKLALQQLQAQMEDYKEKARKEVADAQRqakdwaSEAEKNSGGLSRLQD 894
Cdd:pfam02463 696 RRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEK------SRLKKEEKEEEKSEL 769
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 895 ELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVN 974
Cdd:pfam02463 770 SLKEKELAEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLE 849
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 975 RGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEGFQKpSASLSQLESQNQLLQERLQAEEREKTVLQS 1054
Cdd:pfam02463 850 KLAEEELERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKEE-KKELEEESQKLNLLEEKENEIEERIKEEAE 928
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1055 TNRKLERRVKELSIQIDDERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQARIKSLE 1134
Cdd:pfam02463 929 ILLKYEEEPEELLLEEADEKEKEENNKEEEEERNKRLLLAKEELGKVNLMAIEEFEEKEERYNKDELEKERLEEEKKKLI 1008
|
.
gi 1720405137 1135 K 1135
Cdd:pfam02463 1009 R 1009
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
373-842 |
6.08e-07 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 53.62 E-value: 6.08e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 373 LERQLEEKAEECHRLQ----ELLERRKGEVQQSSKELQNMKLLLGQEEGLRHGLEAQVKELQLKLKHSQSPDSGKESLLK 448
Cdd:COG4717 47 LLERLEKEADELFKPQgrkpELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQ 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 449 --DLLDTRELLEELLEGKQRVEEQLRLRERELTALKGALKEEVASHDQEVEHVRLQYQRDTEQLRRSMQDATQDHAALEA 526
Cdd:COG4717 127 llPLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQ 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 527 ERQKMSSLVRELQRELEETSEETGHWQS--MFQKNKEELRATKQELLQLRMEKEEMEEELGEKMEVLQRDLEQARASTRD 604
Cdd:COG4717 207 RLAELEEELEEAQEELEELEEELEQLENelEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLL 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 605 THQVEELKKELRRTQGELKELQAEQQNQEVTGRHQNQVLEKQLAALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKA 684
Cdd:COG4717 287 ALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLE 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 685 KVASETEAMvLGQRRATVETTLRETQEENDEF---RRRILGLEQQLKEARG--LAEGGEAVEARLRDKVHRLEVEKQQLE 759
Cdd:COG4717 367 ELEQEIAAL-LAEAGVEDEEELRAALEQAEEYqelKEELEELEEQLEELLGelEELLEALDEEELEEELEELEEELEELE 445
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 760 EALNAAREEEGNLAAAKRALevrldEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEE-QKRLLNRTVDRLNKE 838
Cdd:COG4717 446 EELEELREELAELEAELEQL-----EEDGELAELLQELEELKAELRELAEEWAALKLALELLEEaREEYREERLPPVLER 520
|
....
gi 1720405137 839 LEQI 842
Cdd:COG4717 521 ASEY 524
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
790-1119 |
6.22e-07 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 53.87 E-value: 6.22e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 790 LARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQigddSKLALQQLQAQMEDYKEkARKEVA 869
Cdd:TIGR04523 147 IKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLK----LELLLSNLKKKIQKNKS-LESQIS 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 870 DAQRQAKDWASEAEKnsgglsrLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAENKKRFQDDKARQLKSLE 949
Cdd:TIGR04523 222 ELKKQNNQLKDNIEK-------KQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLK 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 950 EKVSRLE------------AELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLAS 1017
Cdd:TIGR04523 295 SEISDLNnqkeqdwnkelkSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEK 374
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1018 -SEGFQKPSASLSQLESQNQLLQERLQAEEREKT-------VLQSTNRKLERRVKELSIQIDDERQHVNDQKDQ---LTL 1086
Cdd:TIGR04523 375 lKKENQSYKQEIKNLESQINDLESKIQNQEKLNQqkdeqikKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQdsvKEL 454
|
330 340 350
....*....|....*....|....*....|...
gi 1720405137 1087 RVKALKRQVDEAEEEIERLDSLRKKAQRELEEQ 1119
Cdd:TIGR04523 455 IIKNLDNTRESLETQLKVLSRSINKIKQNLEQK 487
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
601-966 |
1.30e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 52.76 E-value: 1.30e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 601 STRDTHQVEELKKELRRTQGELKELQAEQQNQEVTGRHQNQVLEKQLAALREEADRGRELEQQNLQLQKTLQQLRQDCEE 680
Cdd:TIGR02169 669 SRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSS 748
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 681 ASKAKVASETEAMVLGQRRATVETTLRETQEENDEFRRRIL--GLEQQLKEARGLAEGGEAVEARLRD---KVHRLEVEK 755
Cdd:TIGR02169 749 LEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLShsRIPEIQAELSKLEEEVSRIEARLREieqKLNRLTLEK 828
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 756 QQLEEALNAAREEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRL 835
Cdd:TIGR02169 829 EYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEEL 908
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 836 NKELEQIGDDSKLALQQLQAQMEDYKEKARKEVADaqrqakdwaSEAEKNSGGLSRLQDELQRLRQALQTsqaerdtarl 915
Cdd:TIGR02169 909 EAQIEKKRKRLSELKAKLEALEEELSEIEDPKGED---------EEIPEEELSLEDVQAELQRVEEEIRA---------- 969
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 1720405137 916 dkeLLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLE--AELDEEKNTV 966
Cdd:TIGR02169 970 ---LEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAILEriEEYEKKKREV 1019
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
728-1149 |
1.32e-06 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 53.04 E-value: 1.32e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 728 KEARGLAEGGEAVEARLRDKVHRLEVEKQQLEE---ALNAAREEEGNLAAAKRALEVRLDEAQRGLARLGQEQQA----- 799
Cdd:PRK04863 279 NERRVHLEEALELRRELYTSRRQLAAEQYRLVEmarELAELNEAESDLEQDYQAASDHLNLVQTALRQQEKIERYqadle 358
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 800 -LNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLnkeleqigddsklalqqlQAQMEDYKEK--ARKEVADAQRQAK 876
Cdd:PRK04863 359 eLEERLEEQNEVVEEADEQQEENEARAEAAEEEVDEL------------------KSQLADYQQAldVQQTRAIQYQQAV 420
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 877 DWASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTARLDkelLAQRLQgleqEAENKKRfQDDKARQL-KSLEEKVSRL 955
Cdd:PRK04863 421 QALERAKQLCGLPDLTADNAEDWLEEFQAKEQEATEELLS---LEQKLS----VAQAAHS-QFEQAYQLvRKIAGEVSRS 492
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 956 EA-----ELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQdlecdkiSLERQNKDLKTRLASSEGFQkpsaslsQ 1030
Cdd:PRK04863 493 EAwdvarELLRRLREQRHLAEQLQQLRMRLSELEQRLRQQQRAER-------LLAEFCKRLGKNLDDEDELE-------Q 558
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1031 LESQNQLLQERLQAEEREKTVLQSTnrkLERRVKELSIQIDDERQHVnDQKDQLTLRVKALKRQVDEAEEEIERLDSLRK 1110
Cdd:PRK04863 559 LQEELEARLESLSESVSEARERRMA---LRQQLEQLQARIQRLAARA-PAWLAAQDALARLREQSGEEFEDSQDVTEYMQ 634
|
410 420 430
....*....|....*....|....*....|....*....
gi 1720405137 1111 KAQRELEEQHEVNEQLQARIKSLEKDAWRKASRSAAESA 1149
Cdd:PRK04863 635 QLLERERELTVERDELAARKQALDEEIERLSQPGGSEDP 673
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
331-989 |
1.46e-06 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 52.66 E-value: 1.46e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 331 EQMQPLGALAGQAELTRKMEELQKKLDEEVKKRQKLEPSRVGLERQLEEKAEECHRL-----QELLERRKGEVQQSSKEL 405
Cdd:TIGR00618 237 QTQQSHAYLTQKREAQEEQLKKQQLLKQLRARIEELRAQEAVLEETQERINRARKAAplaahIKAVTQIEQQAQRIHTEL 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 406 QNMKLLLGQEEGLRHGLEAQVKELQLKLKHSQSPDSgKESLLKDLLDTRELLEELLEGKQRVEEQLRLRERELTALKGAL 485
Cdd:TIGR00618 317 QSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTLHS-QEIHIRDAHEVATSIREISCQQHTLTQHIHTLQQQKTTLTQKL 395
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 486 KEEVASHDQEVEHVRLQYQRDTEQlRRSMQDATQDHAALEAERQKMSSLVRELQRELEETSEETGHWQSMFQKNKE--EL 563
Cdd:TIGR00618 396 QSLCKELDILQREQATIDTRTSAF-RDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEreQQ 474
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 564 RATKQELLQLRMEKEEMEEELGEKMEVLQRDL-EQARASTRDTHQVEELKKELRRTQGELKELQAEQQNQEVTgRHQNQV 642
Cdd:TIGR00618 475 LQTKEQIHLQETRKKAVVLARLLELQEEPCPLcGSCIHPNPARQDIDNPGPLTRRMQRGEQTYAQLETSEEDV-YHQLTS 553
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 643 LEKQLAALREEADRGREleqqnlqlqktlqqlrqdcEEASKAKVASETEAMVLGQRRATVEttLRETQEENDEFRRRILG 722
Cdd:TIGR00618 554 ERKQRASLKEQMQEIQQ-------------------SFSILTQCDNRSKEDIPNLQNITVR--LQDLTEKLSEAEDMLAC 612
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 723 LEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLE-EALNAAREEEGNLAAAKRALEvrldeaqrglARLGQEQQALN 801
Cdd:TIGR00618 613 EQHALLRKLQPEQDLQDVRLHLQQCSQELALKLTALHaLQLTLTQERVREHALSIRVLP----------KELLASRQLAL 682
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 802 RALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIGDDSKLALQQLQAQMEDYKEKARKEVADAQRQAKDWASE 881
Cdd:TIGR00618 683 QKMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREFNEIENASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEA 762
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 882 AEKNSGGLSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDE 961
Cdd:TIGR00618 763 HFNNNEEVTAALQTGAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSA 842
|
650 660
....*....|....*....|....*...
gi 1720405137 962 EKNTVELLTDRVNRGRDQVDQLRTELMQ 989
Cdd:TIGR00618 843 TLGEITHQLLKYEECSKQLAQLTQEQAK 870
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
425-1067 |
1.63e-06 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 52.53 E-value: 1.63e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 425 QVKELQLKLKHSQSPDSGKESLLKDLLDTRELleelleGKQRVEEQLRLRERELTALKGALKEEVASHDQEVEHVRLQYQ 504
Cdd:pfam12128 252 TLESAELRLSHLHFGYKSDETLIASRQEERQE------TSAELNQLLRTLDDQWKEKRDELNGELSAADAAVAKDRSELE 325
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 505 RDTEQLRRsMQDATQDHAALEAE-----RQKMSSLVRELQRELEETSEETGHWQSMFQKNKEELratKQELLQLRMEKEE 579
Cdd:pfam12128 326 ALEDQHGA-FLDADIETAAADQEqlpswQSELENLEERLKALTGKHQDVTAKYNRRRSKIKEQN---NRDIAGIKDKLAK 401
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 580 MEEELGEKMEVLQRDLEQARASTRDTH-----QVEELKKELRRTQGELKELQAEQQ--NQEVTGRHQNQVL-----EKQL 647
Cdd:pfam12128 402 IREARDRQLAVAEDDLQALESELREQLeagklEFNEEEYRLKSRLGELKLRLNQATatPELLLQLENFDERierarEEQE 481
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 648 AALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAMVLGQRRATVETTLRETQEENDEFRRRILGLEQQL 727
Cdd:pfam12128 482 AANAEVERLQSELRQARKRRDQASEALRQASRRLEERQSALDELELQLFPQAGTLLHFLRKEAPDWEQSIGKVISPELLH 561
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 728 K-----EARGLAEGGEAVEARLRDKVHRLEV------------EKQQLEEALNAAREEEGNLAAAKRALEVRLDEAQRGL 790
Cdd:pfam12128 562 RtdldpEVWDGSVGGELNLYGVKLDLKRIDVpewaaseeelreRLDKAEEALQSAREKQAAAEEQLVQANGELEKASREE 641
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 791 --ARLGQEQQALNRALEEEGKQREALRRSKAeLEEQKRLLNRTVDRLNKELEQIGDDSKLALQQLQAQMEDY---KEKAR 865
Cdd:pfam12128 642 tfARTALKNARLDLRRLFDEKQSEKDKKNKA-LAERKDSANERLNSLEAQLKQLDKKHQAWLEEQKEQKREArteKQAYW 720
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 866 KEVA---DAQRQAKDWASEAEKnsgglSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAENKKRFQDDKA 942
Cdd:pfam12128 721 QVVEgalDAQLALLKAAIAARR-----SGAKAELKALETWYKRDLASLGVDPDVIAKLKREIRTLERKIERIAVRRQEVL 795
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 943 RQLKSLEEKVS----RLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASS 1018
Cdd:pfam12128 796 RYFDWYQETWLqrrpRLATQLSNIERAISELQQQLARLIADTKLRRAKLEMERKASEKQQVRLSENLRGLRCEMSKLATL 875
|
650 660 670 680
....*....|....*....|....*....|....*....|....*....
gi 1720405137 1019 EGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELS 1067
Cdd:pfam12128 876 KEDANSEQAQGSIGERLAQLEDLKLKRDYLSESVKKYVEHFKNVIADHS 924
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
597-826 |
2.32e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 51.30 E-value: 2.32e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 597 QARASTRDTHQVEELKKELRRTQGELKELQAEQQNQEVTGRHQNQVLEKQLAALREEADRGRELEQQNLQLQKTLQQLRQ 676
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 677 DcEEASKAKVASETEAMVLGQRRATVETTLRetQEENDEFRRRILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQ 756
Cdd:COG4942 98 E-LEAQKEELAELLRALYRLGRQPPLALLLS--PEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERA 174
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 757 QLEEALNAAREEegnlaaaKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKR 826
Cdd:COG4942 175 ELEALLAELEEE-------RAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAA 237
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
810-1119 |
3.77e-06 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 51.45 E-value: 3.77e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 810 QREALRRSKAELEEQKRLlnrtVDRLNKELEQIG--DDSKLALQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSG 887
Cdd:PRK11281 44 QLDALNKQKLLEAEDKLV----QQDLEQTLALLDkiDRQKEETEQLKQQLAQAPAKLRQAQAELEALKDDNDEETRETLS 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 888 GLS--RLQDELQRLRQALQTSQAERDTARldkellaqrlqgleqeaenkkrfqddkaRQLKSLEEKVSRLEAELDEEKNT 965
Cdd:PRK11281 120 TLSlrQLESRLAQTLDQLQNAQNDLAEYN----------------------------SQLVSLQTQPERAQAALYANSQR 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 966 VELLTDRVNRGRDQVDQLRTELMQERSARQDLecdkisLERQNKDLKTRLASSEGFQK--------PSASLSQLESQNQL 1037
Cdd:PRK11281 172 LQQIRNLLKGGKVGGKALRPSQRVLLQAEQAL------LNAQNDLQRKSLEGNTQLQDllqkqrdyLTARIQRLEHQLQL 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1038 LQERLQA---EEREKTVLQSTNRKLERR-------VKELSI--QIDDERQHVNDQKDQLT---LRVKalkrqvdeaeeei 1102
Cdd:PRK11281 246 LQEAINSkrlTLSEKTVQEAQSQDEAARiqanplvAQELEInlQLSQRLLKATEKLNTLTqqnLRVK------------- 312
|
330
....*....|....*..
gi 1720405137 1103 ERLDSLrKKAQRELEEQ 1119
Cdd:PRK11281 313 NWLDRL-TQSERNIKEQ 328
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
316-824 |
4.15e-06 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 51.22 E-value: 4.15e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 316 SESEASVRRKVSLVLEQMQPLGALAGQ-AELTRKMEELQKKLDEEVKKRQKLEPSRVGLERQLEEKAEECHRLQEL---- 390
Cdd:PRK03918 213 SSELPELREELEKLEKEVKELEELKEEiEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELkeka 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 391 --LERRKGEVQQSSKELQNMKLLLGQEEGLRHGLEAQVKELQLKLKHSQSPDSGKESLLKDLLDTRELLEELLEGKQRVE 468
Cdd:PRK03918 293 eeYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHELYEEAKAKKE 372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 469 EQLRLRERELTALKGALKEEVASHDQEVEHVRLQYQRDTEQLRRSMQDATQDHAA---LEAERQKMSSLVRELQRE---- 541
Cdd:PRK03918 373 ELERLKKRLTGLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAieeLKKAKGKCPVCGRELTEEhrke 452
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 542 -LEETSEETGHWQSMFQKNKEELRATKQELLQLRMEKEEMEEELGEKMEVLQRDLEQARASTRDTHQVEELKKELRRTQG 620
Cdd:PRK03918 453 lLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESELIKLKELAEQLKELEEKLKKYNLEELEKKAEEYEKLKE 532
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 621 ELKELQAEQQNQEVTGRHQNQvLEKQLAALREEADrgrELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAMVLGQRRA 700
Cdd:PRK03918 533 KLIKLKGEIKSLKKELEKLEE-LKKKLAELEKKLD---ELEEELAELLKELEELGFESVEELEERLKELEPFYNEYLELK 608
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 701 TVETTLRETQEENDEfrrrilgLEQQLKEARGLAEGGEAVEARLRDKVHRLEV-----EKQQLEEALNAAREEEGNLAAA 775
Cdd:PRK03918 609 DAEKELEREEKELKK-------LEEELDKAFEELAETEKRLEELRKELEELEKkyseeEYEELREEYLELSRELAGLRAE 681
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*....
gi 1720405137 776 KRALEVRLDEAQRGLARLGQEQQA----------LNRALEEEGKQREALRRSKAELEEQ 824
Cdd:PRK03918 682 LEELEKRREEIKKTLEKLKEELEErekakkelekLEKALERVEELREKVKKYKALLKER 740
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
465-930 |
4.41e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 50.92 E-value: 4.41e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 465 QRVEEQLRLRERELTALKgALKEEVASHDQEVEHVRLQYQRDTEQLRRsmQDATQDHAALEAERQKMSSLVRELQRELEE 544
Cdd:COG4717 74 KELEEELKEAEEKEEEYA-ELQEELEELEEELEELEAELEELREELEK--LEKLLQLLPLYQELEALEAELAELPERLEE 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 545 TSEETGHWQSMfqknKEELRATKQELLQLRMEKEEMEEELGEKMEVLQRDLEQARASTRDthQVEELKKELRRTQGELKE 624
Cdd:COG4717 151 LEERLEELREL----EEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQ--RLAELEEELEEAQEELEE 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 625 LQAEQQNQEVTGRHQnqvlekqlaalrEEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAMVLGQRRATVET 704
Cdd:COG4717 225 LEEELEQLENELEAA------------ALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLL 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 705 TLRETQEENDEFRRRILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGnlAAAKRALEVRLD 784
Cdd:COG4717 293 LAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEE--LEEELQLEELEQ 370
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 785 EAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQkrLLNRTVDRLNKELEQIGDDSKLALQQLQAQMEDYKEK- 863
Cdd:COG4717 371 EIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQ--LEELLGELEELLEALDEEELEEELEELEEELEELEEEl 448
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1720405137 864 --ARKEVADAQRQAKDWASEAEknsggLSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQE 930
Cdd:COG4717 449 eeLREELAELEAELEQLEEDGE-----LAELLQELEELKAELRELAEEWAALKLALELLEEAREEYREE 512
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
647-915 |
5.59e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.15 E-value: 5.59e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 647 LAALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAMVLGQRRATVETTLRETQEENDEFRRRILGLEQQ 726
Cdd:COG4942 12 ALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKE 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 727 LKEARGlaeggeavearlrdkvhRLEVEKQQLEEALNAAREEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEE 806
Cdd:COG4942 92 IAELRA-----------------ELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEE 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 807 EGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQigddsklaLQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNS 886
Cdd:COG4942 155 LRADLAELAALRAELEAERAELEALLAELEEERAA--------LEALKAERQKLLARLEKELAELAAELAELQQEAEELE 226
|
250 260
....*....|....*....|....*....
gi 1720405137 887 GGLSRLQDELQRLRQALQTSQAERDTARL 915
Cdd:COG4942 227 ALIARLEAEAAAAAERTPAAGFAALKGKL 255
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
1043-1159 |
6.37e-06 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 50.24 E-value: 6.37e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1043 QAEEREKTVLQSTNRKLERRVKELSIQIDDERQHVNDQKDQ---LTLRVKALKRQVDE---AEEEIERLDSLRKKAQREL 1116
Cdd:COG2433 402 EHEERELTEEEEEIRRLEEQVERLEAEVEELEAELEEKDERierLERELSEARSEERReirKDREISRLDREIERLEREL 481
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 1720405137 1117 EEQHEVNEQLQARIKSLeKDAWRKASRSAAESALKQEGLSSDE 1159
Cdd:COG2433 482 EEERERIEELKRKLERL-KELWKLEHSGELVPVKVVEKFTKEA 523
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
849-1107 |
7.63e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 50.30 E-value: 7.63e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 849 ALQQLQAQMEDYKEkARKEVADAQRQAKDWAseaeknsgGLSRLQDELQRLRQALQTSQAERDTARLDKEllAQRLQGLE 928
Cdd:COG4913 226 AADALVEHFDDLER-AHEALEDAREQIELLE--------PIRELAERYAAARERLAELEYLRAALRLWFA--QRRLELLE 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 929 QEAENkkrfqddkarqlksLEEKVSRLEAELDEekntvelLTDRVNRGRDQVDQLRTELMQerSARQDLEcdkiSLERQN 1008
Cdd:COG4913 295 AELEE--------------LRAELARLEAELER-------LEARLDALREELDELEAQIRG--NGGDRLE----QLEREI 347
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1009 KDLKTRLASSEgfqkpsASLSQLESQNQLLQERLQAEEREKTVLQstnrkleRRVKELSIQIDDERQHVNDQKDQLTLRV 1088
Cdd:COG4913 348 ERLERELEERE------RRRARLEALLAALGLPLPASAEEFAALR-------AEAAALLEALEEELEALEEALAEAEAAL 414
|
250
....*....|....*....
gi 1720405137 1089 KALKRQVDEAEEEIERLDS 1107
Cdd:COG4913 415 RDLRRELRELEAEIASLER 433
|
|
| MutS2 |
COG1193 |
dsDNA-specific endonuclease/ATPase MutS2 [Replication, recombination and repair]; |
792-935 |
7.90e-06 |
|
dsDNA-specific endonuclease/ATPase MutS2 [Replication, recombination and repair];
Pssm-ID: 440806 [Multi-domain] Cd Length: 784 Bit Score: 50.14 E-value: 7.90e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 792 RLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIgddsKLALQQLQAQMEDYKEKARKEVADA 871
Cdd:COG1193 494 RLGLPEEIIERARELLGEESIDVEKLIEELERERRELEEEREEAERLREEL----EKLREELEEKLEELEEEKEEILEKA 569
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1720405137 872 QRQAKDWASEAEKnsgglsrlqdELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAENKK 935
Cdd:COG1193 570 REEAEEILREARK----------EAEELIRELREAQAEEEELKEARKKLEELKQELEEKLEKPK 623
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
758-1154 |
1.33e-05 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 49.12 E-value: 1.33e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 758 LEEALNAAREEEGNLAAAKRA--LEVRLDEAQRGLARLGQEQQALNRALEEEgkqREALRRSKAELEEQKRLLNRTVDRL 835
Cdd:pfam07888 9 LEEESHGEEGGTDMLLVVPRAelLQNRLEECLQERAELLQAQEAANRQREKE---KERYKRDREQWERQRRELESRVAEL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 836 NKELEQIGDD-SKLALQQLQAQMEDYKEKARKEVADAQRQA------------KDWASEAEKNSGGLSRLQDELQRLRQA 902
Cdd:pfam07888 86 KEELRQSREKhEELEEKYKELSASSEELSEEKDALLAQRAAhearireleediKTLTQRVLERETELERMKERAKKAGAQ 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 903 LQTSQAERDTARLDKELLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRL----------EAELDEEKNTVELLTDR 972
Cdd:pfam07888 166 RKEEEAERKQLQAKLQQTEEELRSLSKEFQELRNSLAQRDTQVLQLQDTITTLtqklttahrkEAENEALLEELRSLQER 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 973 VNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASsegfqkpsASLSQLESQNQLLQER---LQAEEREK 1049
Cdd:pfam07888 246 LNASERKVEGLGEELSSMAAQRDRTQAELHQARLQAAQLTLQLAD--------ASLALREGRARWAQERetlQQSAEADK 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1050 TVLQSTNRKLERRVKELSiqidDERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQAR 1129
Cdd:pfam07888 318 DRIEKLSAELQRLEERLQ----EERMEREKLEVELGREKDCNRVQLSESRRELQELKASLRVAQKEKEQLQAEKQELLEY 393
|
410 420
....*....|....*....|....*
gi 1720405137 1130 IKSLEKDAWRKASRSAAESALKQEG 1154
Cdd:pfam07888 394 IRQLEQRLETVADAKWSEAALTSTE 418
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
557-917 |
1.57e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 49.53 E-value: 1.57e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 557 QKNKEELRATKQELLQLRmekeemeeelgekmevlqRDLEQARASTRDTHQVEELKKELRRTQGELKELQAEQQNQEVTG 636
Cdd:COG4913 606 FDNRAKLAALEAELAELE------------------EELAEAEERLEALEAELDALQERREALQRLAEYSWDEIDVASAE 667
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 637 RHQNQvLEKQLAALREEADRGRELEQQNLQLQKTLqqlrqdcEEASKAKVASETEAMVLGQRRATVETTLRETQEENDEF 716
Cdd:COG4913 668 REIAE-LEAELERLDASSDDLAALEEQLEELEAEL-------EELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAA 739
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 717 RRRILGLEQQLKEARGLAEGGEAVEARLRDkvhRLEVEKQQLEEALNAAREE-EGNLAAAKRALEVRLDEAQRGLARLGq 795
Cdd:COG4913 740 EDLARLELRALLEERFAAALGDAVERELRE---NLEERIDALRARLNRAEEElERAMRAFNREWPAETADLDADLESLP- 815
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 796 EQQALNRALEEEG------KQREALRRS--------KAELEEQKRLLNRTVDRLNKELEQI--GDDSKLALqqlqaqmeD 859
Cdd:COG4913 816 EYLALLDRLEEDGlpeyeeRFKELLNENsiefvadlLSKLRRAIREIKERIDPLNDSLKRIpfGPGRYLRL--------E 887
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 1720405137 860 YKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQ-DELQRLRQALQTSQAERDTARLDK 917
Cdd:COG4913 888 ARPRPDPEVREFRQELRAVTSGASLFDEELSEARfAALKRLIERLRSEEEESDRRWRAR 946
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
855-1144 |
1.97e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 48.91 E-value: 1.97e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 855 AQMEDYKEKARKEVAdaqrqakdwasEAEKNSGGLSRLQDELqrlRQALQTSQAERDTARLDKELLAQRlqgleQEAENK 934
Cdd:TIGR02169 166 AEFDRKKEKALEELE-----------EVEENIERLDLIIDEK---RQQLERLRREREKAERYQALLKEK-----REYEGY 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 935 KRFQDDKA--RQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQdlecdkISLERQNKDLK 1012
Cdd:TIGR02169 227 ELLKEKEAleRQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQ------LRVKEKIGELE 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1013 TRLASSEGfqkpsaSLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELSIqidderqhvndQKDQLTLRVKALK 1092
Cdd:TIGR02169 301 AEIASLER------SIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERK-----------RRDKLTEEYAELK 363
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 1720405137 1093 RQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQARIKSLEKDAWRKASRS 1144
Cdd:TIGR02169 364 EELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEEL 415
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
695-919 |
2.14e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 48.86 E-value: 2.14e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 695 LGQRRATVETTLRETQEENDEFRRRILGLEQQLKEARgLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAA 774
Cdd:COG3206 166 LELRREEARKALEFLEEQLPELRKELEEAEAALEEFR-QKNGLVDLSEEAKLLLQQLSELESQLAEARAELAEAEARLAA 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 775 AKRALEVRLDEAQR-----GLARLGQEQQALNRALEEE----GKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIGDD 845
Cdd:COG3206 245 LRAQLGSGPDALPEllqspVIQQLRAQLAELEAELAELsaryTPNHPDVIALRAQIAALRAQLQQEAQRILASLEAELEA 324
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1720405137 846 SKLALQQLQAQMEDYKEKArKEVADAQRQakdwaseaeknsggLSRLQDELQRLRQALQTSQAERDTARLDKEL 919
Cdd:COG3206 325 LQAREASLQAQLAQLEARL-AELPELEAE--------------LRRLEREVEVARELYESLLQRLEEARLAEAL 383
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
395-1140 |
2.47e-05 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 48.81 E-value: 2.47e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 395 KGEVQQSSKELQNMKLLLGQEEGLRHG----LEAQVKELQLKLKHSQSPDSGKESLLKdLLDTRELLEELLEGKQRVEEQ 470
Cdd:TIGR00618 193 HGKAELLTLRSQLLTLCTPCMPDTYHErkqvLEKELKHLREALQQTQQSHAYLTQKRE-AQEEQLKKQQLLKQLRARIEE 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 471 LRLRERELTALKGAL-----KEEVASHDQEVEHVRLQYQRDTEQLRRSMQDATQ------DHAALEAERQKMSSLVRELQ 539
Cdd:TIGR00618 272 LRAQEAVLEETQERInrarkAAPLAAHIKAVTQIEQQAQRIHTELQSKMRSRAKllmkraAHVKQQSSIEEQRRLLQTLH 351
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 540 RELEETSEETGHwQSMFQKNKEELRATKQELLQLRMEKEEMEEELGEKMEVLQRDleqarasTRDTHQVEELKKELRRTQ 619
Cdd:TIGR00618 352 SQEIHIRDAHEV-ATSIREISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKELDIL-------QREQATIDTRTSAFRDLQ 423
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 620 GELKELQAEQQNQEVTGRHQNQVLEKQLAALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKvaseteamvlgqrr 699
Cdd:TIGR00618 424 GQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEREQQLQTKEQIHLQETRKK-------------- 489
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 700 ATVETTLRETQEENDEFRRRILGLEQQLKEArGLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAREEegnlaaaKRAL 779
Cdd:TIGR00618 490 AVVLARLLELQEEPCPLCGSCIHPNPARQDI-DNPGPLTRRMQRGEQTYAQLETSEEDVYHQLTSERKQ-------RASL 561
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 780 EVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIGDDSKLALQQLQAQMED 859
Cdd:TIGR00618 562 KEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHALLRKLQPEQDLQDVRLHLQQCSQEL 641
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 860 YKEKARKEvadaqRQAKDWASEAEKNSGGLSRLQDElqrlrQALQTSQAERDTARLDKELLAQRLQGLEQEAEnkkrfqd 939
Cdd:TIGR00618 642 ALKLTALH-----ALQLTLTQERVREHALSIRVLPK-----ELLASRQLALQKMQSEKEQLTYWKEMLAQCQT------- 704
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 940 dkarQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQErsarQDLECDKISLERQNKDLKTRLASSE 1019
Cdd:TIGR00618 705 ----LLRELETHIEEYDREFNEIENASSSLGSDLAAREDALNQSLKELMHQ----ARTVLKARTEAHFNNNEEVTAALQT 776
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1020 GfQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQIDDERQHVNDQKDQLTLRVKALKRQVDEAE 1099
Cdd:TIGR00618 777 G-AELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLGEITHQLLKYE 855
|
730 740 750 760
....*....|....*....|....*....|....*....|.
gi 1720405137 1100 EEIERLDSLRKKaQRELEEQHEVNEQLQARIKSLEKDAWRK 1140
Cdd:TIGR00618 856 ECSKQLAQLTQE-QAKIIQLSDKLNGINQIKIQFDGDALIK 895
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
814-1136 |
2.52e-05 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 48.48 E-value: 2.52e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 814 LRRSKAELEEQKRLLNRTVDRLNKELEQIGDDSKlALQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQ 893
Cdd:TIGR04523 129 LEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYN-DLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLLSNLK 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 894 DELQRLRQalqtsqaerdtarLDKEL--LAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTD 971
Cdd:TIGR04523 208 KKIQKNKS-------------LESQIseLKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQK 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 972 RVNRGRDQVDQLRTELMQERSARQDLECDKIslERQNKDLKTRLASSEgfQKPSASLSQLESQNQL---LQERLQAEERE 1048
Cdd:TIGR04523 275 ELEQNNKKIKELEKQLNQLKSEISDLNNQKE--QDWNKELKSELKNQE--KKLEEIQNQISQNNKIisqLNEQISQLKKE 350
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1049 KTVLQSTNRKLERRVKELSIQIDD---ERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQRE---LEEQHE- 1121
Cdd:TIGR04523 351 LTNSESENSEKQRELEEKQNEIEKlkkENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEkelLEKEIEr 430
|
330
....*....|....*...
gi 1720405137 1122 ---VNEQLQARIKSLEKD 1136
Cdd:TIGR04523 431 lkeTIIKNNSEIKDLTNQ 448
|
|
| EmrA |
COG1566 |
Multidrug resistance efflux pump EmrA [Defense mechanisms]; |
844-970 |
2.70e-05 |
|
Multidrug resistance efflux pump EmrA [Defense mechanisms];
Pssm-ID: 441174 [Multi-domain] Cd Length: 331 Bit Score: 47.74 E-value: 2.70e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 844 DDSKLALQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSG--GLSRLQDELQRLRQALQ---TSQAERDTARLDKE 918
Cdd:COG1566 79 TDLQAALAQAEAQLAAAEAQLARLEAELGAEAEIAAAEAQLAAAqaQLDLAQRELERYQALYKkgaVSQQELDEARAALD 158
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 1720405137 919 LLAQRLQGLEQEAENKKRfQDDKARQLKSLEEKVSRLEAELDEEKNTVELLT 970
Cdd:COG1566 159 AAQAQLEAAQAQLAQAQA-GLREEEELAAAQAQVAQAEAALAQAELNLARTT 209
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
469-1111 |
3.27e-05 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 48.30 E-value: 3.27e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 469 EQLRLRERELTALKGALKEEVASHDQEVEHVRLQYQRDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQRELEETSEE 548
Cdd:pfam12128 251 NTLESAELRLSHLHFGYKSDETLIASRQEERQETSAELNQLLRTLDDQWKEKRDELNGELSAADAAVAKDRSELEALEDQ 330
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 549 TGhwqsMFQKNKEELRATKQELLQLRMEKEEMEEELGEKMEVLQRDLEQArASTRDTHQVEELKKELRRTQGELKELQAE 628
Cdd:pfam12128 331 HG----AFLDADIETAAADQEQLPSWQSELENLEERLKALTGKHQDVTAK-YNRRRSKIKEQNNRDIAGIKDKLAKIREA 405
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 629 QQNQEVTGRHQNQVLEKQL-----AALREEADRGRELEQQNLQLQKTLQQLRQDCEE-ASKAKVASETEAM--VLGQRRA 700
Cdd:pfam12128 406 RDRQLAVAEDDLQALESELreqleAGKLEFNEEEYRLKSRLGELKLRLNQATATPELlLQLENFDERIERAreEQEAANA 485
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 701 TVE------TTLRETQEENDEFRRRILGLEQQLKEArgLAEGGEAVEARLRDKVHRLEVEKQQLEEALN--AARE----- 767
Cdd:pfam12128 486 EVErlqselRQARKRRDQASEALRQASRRLEERQSA--LDELELQLFPQAGTLLHFLRKEAPDWEQSIGkvISPEllhrt 563
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 768 ------EEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELE- 840
Cdd:pfam12128 564 dldpevWDGSVGGELNLYGVKLDLKRIDVPEWAASEEELRERLDKAEEALQSAREKQAAAEEQLVQANGELEKASREETf 643
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 841 --QIGDDSKLALQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSR-LQDELQRLRQALQTSQAERDTARLD- 916
Cdd:pfam12128 644 arTALKNARLDLRRLFDEKQSEKDKKNKALAERKDSANERLNSLEAQLKQLDKkHQAWLEEQKEQKREARTEKQAYWQVv 723
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 917 ----KELLAQRLQGLEQEAENKKRFQD----DKARQLKSL---EEKVSRLEAELDEEKNTVElltdRVNRGRDQVDQLRt 985
Cdd:pfam12128 724 egalDAQLALLKAAIAARRSGAKAELKaletWYKRDLASLgvdPDVIAKLKREIRTLERKIE----RIAVRRQEVLRYF- 798
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 986 ELMQER--SARQDLECDKISLERQNKDLKTRLASSEgfQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLER-R 1062
Cdd:pfam12128 799 DWYQETwlQRRPRLATQLSNIERAISELQQQLARLI--ADTKLRRAKLEMERKASEKQQVRLSENLRGLRCEMSKLATlK 876
|
650 660 670 680
....*....|....*....|....*....|....*....|....*....
gi 1720405137 1063 VKELSIQIDDERQHVNDQKDQLTLRVKALKRQVdeaEEEIERLDSLRKK 1111
Cdd:pfam12128 877 EDANSEQAQGSIGERLAQLEDLKLKRDYLSESV---KKYVEHFKNVIAD 922
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
463-838 |
3.39e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 48.14 E-value: 3.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 463 GKQRVEEQLRLRERELTALKGALKEEVASHDQEVEHVrlqyQRDTEQLRRSMQDATQDHAALEAERQkmsslvrELQREL 542
Cdd:TIGR02169 664 GGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRI----ENRLDELSQELSDASRKIGEIEKEIE-------QLEQEE 732
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 543 EETSEETGHWQSMFQKNKEELRATKQELLQLRMEKEEMEeelgekmevlqRDLEQARASTRDTHQvEELKKELRRTQGEL 622
Cdd:TIGR02169 733 EKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELE-----------EDLHKLEEALNDLEA-RLSHSRIPEIQAEL 800
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 623 KELQAEQQNQEVTGRHQNQVLEKqLAALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVASeteamvLGQRRATV 702
Cdd:TIGR02169 801 SKLEEEVSRIEARLREIEQKLNR-LTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEE------LEEELEEL 873
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 703 ETTLRETQEENDEFRRRILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLE------EALNAAREEEGNLAAAK 776
Cdd:TIGR02169 874 EAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEeelseiEDPKGEDEEIPEEELSL 953
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1720405137 777 RALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKE 838
Cdd:TIGR02169 954 EDVQAELQRVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAILERIEEYEKK 1015
|
|
| Crescentin |
pfam19220 |
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament ... |
778-1149 |
3.70e-05 |
|
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament proteins, named crescentin, whose cytoskeletal function is required for the vibrioid and helical shapes of Caulobacter crescentus. Without crescentin, the cells adopt a straight-rod morphology. Crescentin has characteriztic features of IF proteins including the ability to assemble into filaments in vitro without energy or cofactor requirements. In vivo, crescentin forms a helical structure that colocalizes with the inner cell curvatures beneath the cytoplasmic membrane.
Pssm-ID: 437057 [Multi-domain] Cd Length: 401 Bit Score: 47.37 E-value: 3.70e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 778 ALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTV---DRLNKELEQIGDDSKLALQQLQ 854
Cdd:pfam19220 7 LLRVRLGEMADRLEDLRSLKADFSQLIEPIEAILRELPQAKSRLLELEALLAQERaayGKLRRELAGLTRRLSAAEGELE 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 855 A-------------QMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQtsQAERDTARLDKEL-- 919
Cdd:pfam19220 87 ElvarlakleaalrEAEAAKEELRIELRDKTAQAEALERQLAAETEQNRALEEENKALREEAQ--AAEKALQRAEGELat 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 920 LAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEkntvelltdrvnrgRDQVDQLRTELMQERSARQDLEC 999
Cdd:pfam19220 165 ARERLALLEQENRRLQALSEEQAAELAELTRRLAELETQLDAT--------------RARLRALEGQLAAEQAERERAEA 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1000 dkiSLERQNKDLKTRLASSEgfQKPSASLSQLESQNQLLQE-RLQAEEREKTVlqstnRKLERRVKELSIQIDD-ERQHV 1077
Cdd:pfam19220 231 ---QLEEAVEAHRAERASLR--MKLEALTARAAATEQLLAEaRNQLRDRDEAI-----RAAERRLKEASIERDTlERRLA 300
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1720405137 1078 NDQKD--QLTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQARIKSLEKDawRKASRSAAESA 1149
Cdd:pfam19220 301 GLEADleRRTQQFQEMQRARAELEERAEMLTKALAAKDAALERAEERIASLSDRIAELTKR--FEVERAALEQA 372
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
750-972 |
5.18e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 47.32 E-value: 5.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 750 RLEVEKQQLEEALNAAREEEGNLAAAKRALEVRLDE--AQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRL 827
Cdd:COG3206 165 NLELRREEARKALEFLEEQLPELRKELEEAEAALEEfrQKNGLVDLSEEAKLLLQQLSELESQLAEARAELAEAEARLAA 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 828 LNRTVDRLNKELEQIGDDSklALQQLQAQMEDykekARKEVADAQRQAKDwaseaekNSGGLSRLQDELQRLRQALQT-S 906
Cdd:COG3206 245 LRAQLGSGPDALPELLQSP--VIQQLRAQLAE----LEAELAELSARYTP-------NHPDVIALRAQIAALRAQLQQeA 311
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1720405137 907 QAERDTARLDKELLAQRLQGLEQEAENkkrfQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDR 972
Cdd:COG3206 312 QRILASLEAELEALQAREASLQAQLAQ----LEARLAELPELEAELRRLEREVEVARELYESLLQR 373
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
464-1129 |
8.17e-05 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 47.25 E-value: 8.17e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 464 KQRVEEQLRLRERELTALKGALkeevASHDQ--EVEHVR-LQYQRDTEQLRR----------SMQDATQDHAALEAERQK 530
Cdd:COG3096 377 LAEAEARLEAAEEEVDSLKSQL----ADYQQalDVQQTRaIQYQQAVQALEKaralcglpdlTPENAEDYLAAFRAKEQQ 452
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 531 MSSLVRELQRELEETSE-ETGHWQSM---------------FQKNKE------ELRATKQELLQLRMEKEEMEEELGEKM 588
Cdd:COG3096 453 ATEEVLELEQKLSVADAaRRQFEKAYelvckiageversqaWQTAREllrryrSQQALAQRLQQLRAQLAELEQRLRQQQ 532
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 589 EV--LQRDLEQARASTRDT-HQVEELKKELRRTQGELKELQAEQQNQEVTGRHQNQVLEKQLAALREEADRGRELEQQNL 665
Cdd:COG3096 533 NAerLLEEFCQRIGQQLDAaEELEELLAELEAQLEELEEQAAEAVEQRSELRQQLEQLRARIKELAARAPAWLAAQDALE 612
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 666 QLQKTLQQLRQDCEEASKAK---VASETEAMV----LGQRRATVETTLRETQEENDEFRRRILGLEQQLKeARGLAEGGE 738
Cdd:COG3096 613 RLREQSGEALADSQEVTAAMqqlLEREREATVerdeLAARKQALESQIERLSQPGGAEDPRLLALAERLG-GVLLSEIYD 691
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 739 AV--------EARLRDKVHRLEVEKQQLEEALNAAREE--------EGNLAAAKRALEVRLDEAQRGLARLGQEQ----- 797
Cdd:COG3096 692 DVtledapyfSALYGPARHAIVVPDLSAVKEQLAGLEDcpedlyliEGDPDSFDDSVFDAEELEDAVVVKLSDRQwrysr 771
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 798 ----QALNRALEEegKQREALRRSKAELEEQKRLLNRTVDRLNKeLEQigDDSKLALQQLQAQMEDYKEKARKEVADAQR 873
Cdd:COG3096 772 fpevPLFGRAARE--KRLEELRAERDELAEQYAKASFDVQKLQR-LHQ--AFSQFVGGHLAVAFAPDPEAELAALRQRRS 846
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 874 QAKDwaseaeknsgGLSRLQDELQRLRQALQTSQAERDTAR--------LDKELLAQRLQGLEQE---AENKKRFQDDKA 942
Cdd:COG3096 847 ELER----------ELAQHRAQEQQLRQQLDQLKEQLQLLNkllpqanlLADETLADRLEELREEldaAQEAQAFIQQHG 916
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 943 RQLKSLEEKVSRLE---AELDEEKNTVELLTDRVNRGRDQVDQLrTELMQERS--ARQDLECDKISLERQNKDLKTRLAS 1017
Cdd:COG3096 917 KALAQLEPLVAVLQsdpEQFEQLQADYLQAKEQQRRLKQQIFAL-SEVVQRRPhfSYEDAVGLLGENSDLNEKLRARLEQ 995
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1018 SEGFQKPS-----ASLSQLESQNQLLQErLQAEEREKtvlQSTNRKLERRVKELSIQIDDE--------RQHVNDQKDQL 1084
Cdd:COG3096 996 AEEARREAreqlrQAQAQYSQYNQVLAS-LKSSRDAK---QQTLQELEQELEELGVQADAEaeerarirRDELHEELSQN 1071
|
730 740 750 760
....*....|....*....|....*....|....*....|....*
gi 1720405137 1085 TLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQAR 1129
Cdd:COG3096 1072 RSRRSQLEKQLTRCEAEMDSLQKRLRKAERDYKQEREQVVQAKAG 1116
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
311-540 |
8.25e-05 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 46.97 E-value: 8.25e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 311 LREGSSESEASVRRKVSLVLEQMQPLGALAGQAE-LTRKMEELQKKLDEEVKKRQKLEPSRVGLERQLEEKAEECHRLQE 389
Cdd:TIGR02168 703 LRKELEELEEELEQLRKELEELSRQISALRKDLArLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEA 782
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 390 LLERRKGEVQQSSKELQNMKLLLGQEEGLRHGLEAQVKELQLKLKHSQSPDSGKESLLKDLLDTRELLEELLEGKQRVEE 469
Cdd:TIGR02168 783 EIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIE 862
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720405137 470 QLRLRERELTALKGALKEEVASHDQEVEHVRLQYQRDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQR 540
Cdd:TIGR02168 863 ELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEG 933
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
736-1135 |
9.30e-05 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 47.04 E-value: 9.30e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 736 GGEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEegkQREALR 815
Cdd:pfam15921 72 GKEHIERVLEEYSHQVKDLQRRLNESNELHEKQKFYLRQSVIDLQTKLQEMQMERDAMADIRRRESQSQED---LRNQLQ 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 816 RSKAELEEQKRLLNRTVDRLNKELEQIGD---DSKLALQQLQAQMEDYKEKARKEVADAQRQAK-DWASEAEKNSGGLSR 891
Cdd:pfam15921 149 NTVHELEAAKCLKEDMLEDSNTQIEQLRKmmlSHEGVLQEIRSILVDFEEASGKKIYEHDSMSTmHFRSLGSAISKILRE 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 892 LQDELQRLRQALQTSQAERDTARLDK----ELLAQ----RLQGLEQEAENKKRFQDDKARQLKSLEEKV-SRLEAELDEE 962
Cdd:pfam15921 229 LDTEISYLKGRIFPVEDQLEALKSESqnkiELLLQqhqdRIEQLISEHEVEITGLTEKASSARSQANSIqSQLEIIQEQA 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 963 KNTVELLTDRVNRGRDQVDQLRTELmqeRSARQDLECDKISLERQ----NKDLKTRLASSEGFQKPSASLsqlESQNQLL 1038
Cdd:pfam15921 309 RNQNSMYMRQLSDLESTVSQLRSEL---REAKRMYEDKIEELEKQlvlaNSELTEARTERDQFSQESGNL---DDQLQKL 382
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1039 QERLQAEEREKTVLQSTNRKLERRVKELSIQIDDERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEE 1118
Cdd:pfam15921 383 LADLHKREKELSLEKEQNKRLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSECQGQMERQMAAIQGKNESLEK 462
|
410
....*....|....*..
gi 1720405137 1119 QHEVNEQLQARIKSLEK 1135
Cdd:pfam15921 463 VSSLTAQLESTKEMLRK 479
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
335-572 |
9.39e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 46.30 E-value: 9.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 335 PLGALAGQAELTRKMEELQKKLDEEVKKRQKLEPSRVGLERQLEEKAEECHRLQELLERRKGEVQQSSKELQNmklLLGQ 414
Cdd:COG4942 15 AAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAE---LEKE 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 415 EEGLRHGLEAQVKELQLKLKHSQSpdSGKESLLKDLLDTRELLEELLEGkQRVEEQLRLRERELTALKGALkeevashdQ 494
Cdd:COG4942 92 IAELRAELEAQKEELAELLRALYR--LGRQPPLALLLSPEDFLDAVRRL-QYLKYLAPARREQAEELRADL--------A 160
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1720405137 495 EVEHVRLQYQRDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQRELEETSEETghwqSMFQKNKEELRATKQELLQ 572
Cdd:COG4942 161 ELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAEL----AELQQEAEELEALIARLEA 234
|
|
| HEC1 |
COG5185 |
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell ... |
699-1010 |
9.75e-05 |
|
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 444066 [Multi-domain] Cd Length: 594 Bit Score: 46.49 E-value: 9.75e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 699 RATVETTLRETQEENDEFRRRILG----LEQQLKEARG-LAEGGEAVEARLRDKVHRLEVEKQQLE-EALNAAREEEGNL 772
Cdd:COG5185 248 LAQTSDKLEKLVEQNTDLRLEKLGenaeSSKRLNENANnLIKQFENTKEKIAEYTKSIDIKKATESlEEQLAAAEAEQEL 327
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 773 AAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRsKAELEEQKRLLNRTVDRLNKELEQIGDDSKLALQQ 852
Cdd:COG5185 328 EESKRETETGIQNLTAEIEQGQESLTENLEAIKEEIENIVGEVE-LSKSSEELDSFKDTIESTKESLDEIPQNQRGYAQE 406
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 853 LQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERdtarldkelLAQRLQGLEQEAE 932
Cdd:COG5185 407 ILATLEDTLKAADRQIEELQRQIEQATSSNEEVSKLLNELISELNKVMREADEESQSR---------LEEAYDEINRSVR 477
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1720405137 933 NKKRfqddkarqlkSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKD 1010
Cdd:COG5185 478 SKKE----------DLNEELTQIESRVSTLKATLEKLRAKLERQLEGVRSKLDQVAESLKDFMRARGYAHILALENLI 545
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
800-1113 |
1.12e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 46.55 E-value: 1.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 800 LNRALEEEGKQREALRRSKAELEEQKRLLNR-TVDRLNK----ELEQIGDDSKLALQQLQAQMEDYKEKARKEVADAQRQ 874
Cdd:COG3206 96 LERVVDKLNLDEDPLGEEASREAAIERLRKNlTVEPVKGsnviEISYTSPDPELAAAVANALAEAYLEQNLELRREEARK 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 875 AKDWaseaeknsgglsrLQDELQRLRQALQTSQAERDTARLDKELLAqrlqgLEQEAenkkrfqDDKARQLKSLEEKVSR 954
Cdd:COG3206 176 ALEF-------------LEEQLPELRKELEEAEAALEEFRQKNGLVD-----LSEEA-------KLLLQQLSELESQLAE 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 955 LEAELDEEKNTVELLTDRVNRGRDQVDQLrtelmQERSARQDLECDKISLERQNKDLKTRlassegFQKPSASLSQLESQ 1034
Cdd:COG3206 231 ARAELAEAEARLAALRAQLGSGPDALPEL-----LQSPVIQQLRAQLAELEAELAELSAR------YTPNHPDVIALRAQ 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1035 NQLLQERLQAEEREKTV-LQSTNRKLERRVKELSIQIDDERQHVNDQKdQLTLRVKALKRQVDEAEEEIERLDSLRKKAQ 1113
Cdd:COG3206 300 IAALRAQLQQEAQRILAsLEAELEALQAREASLQAQLAQLEARLAELP-ELEAELRRLEREVEVARELYESLLQRLEEAR 378
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
485-1165 |
1.16e-04 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 46.58 E-value: 1.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 485 LKEEVASHDQEVE--HVRLQYQRDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQRELEETSEETGHWQSMFQKNKEE 562
Cdd:TIGR00606 191 LRQVRQTQGQKVQehQMELKYLKQYKEKACEIRDQITSKEAQLESSREIVKSYENELDPLKNRLKEIEHNLSKIMKLDNE 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 563 LRA---TKQELLQLRMEKEEMEEELGEKMEVLQRDLEQARASTrdthqVEELKKELRRTQGELKELQAEQQ--NQEVTGR 637
Cdd:TIGR00606 271 IKAlksRKKQMEKDNSELELKMEKVFQGTDEQLNDLYHNHQRT-----VREKERELVDCQRELEKLNKERRllNQEKTEL 345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 638 HQNQVLEKQLAALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVA-------SETEAMVLGQRRATVETTLRETQ 710
Cdd:TIGR00606 346 LVEQGRLQLQADRHQEHIRARDSLIQSLATRLELDGFERGPFSERQIKNFhtlvierQEDEAKTAAQLCADLQSKERLKQ 425
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 711 EENDEFRRRILG-----------LEQQLKEARGLAEGGEAVEARLRDKvhrLEVEKQQLEEALNAAREEEGNLAAAKRAL 779
Cdd:TIGR00606 426 EQADEIRDEKKGlgrtielkkeiLEKKQEELKFVIKELQQLEGSSDRI---LELDQELRKAERELSKAEKNSLTETLKKE 502
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 780 EVRLDEAQ----RGLARLGQEQQALNRALEEEgKQREALRRSKAELEEQKRLLN-RTVDRLNKEL-----EQIGDDSKLA 849
Cdd:TIGR00606 503 VKSLQNEKadldRKLRKLDQEMEQLNHHTTTR-TQMEMLTKDKMDKDEQIRKIKsRHSDELTSLLgyfpnKKQLEDWLHS 581
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 850 LQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQD-------------ELQRLRQALQTSQAERDTARLD 916
Cdd:TIGR00606 582 KSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDklfdvcgsqdeesDLERLKEEIEKSSKQRAMLAGA 661
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 917 KELLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQD 996
Cdd:TIGR00606 662 TAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSIIDL 741
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 997 LECDKISLERQNKDLKTRLASSEgfqkpsaslSQLESQNQLLqERLQAEEREKTVLQSTNRKLERRVKELS-IQIDDERQ 1075
Cdd:TIGR00606 742 KEKEIPELRNKLQKVNRDIQRLK---------NDIEEQETLL-GTIMPEEESAKVCLTDVTIMERFQMELKdVERKIAQQ 811
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1076 HVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQARIKSLEKDAWRKASRSAAESALKQEGL 1155
Cdd:TIGR00606 812 AAKLQGSDLDRTVQQVNQEKQEKQHELDTVVSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQQFEEQLV 891
|
730
....*....|
gi 1720405137 1156 SSDEEFDNVY 1165
Cdd:TIGR00606 892 ELSTEVQSLI 901
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
865-1153 |
1.21e-04 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 46.27 E-value: 1.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 865 RKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERdtARLDKE---LLAQRLQGLEQEAENKKRFQDDK 941
Cdd:pfam17380 281 QKAVSERQQQEKFEKMEQERLRQEKEEKAREVERRRKLEEAEKARQ--AEMDRQaaiYAEQERMAMERERELERIRQEER 358
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 942 ARQLKSLEEKVSRLEAELDEEKNTVELLTDRVN-RGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKT------- 1013
Cdd:pfam17380 359 KRELERIRQEEIAMEISRMRELERLQMERQQKNeRVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAEQEEarqrevr 438
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1014 RLASSEGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKE------LSIQIDDERQHVNDQKDQLTLR 1087
Cdd:pfam17380 439 RLEEERAREMERVRLEEQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEeqrrkiLEKELEERKQAMIEEERKRKLL 518
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1720405137 1088 VKALK-RQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQL------QARIKSLEKDawRKASRSAAESALKQE 1153
Cdd:pfam17380 519 EKEMEeRQKAIYEEERRREAEEERRKQQEMEERRRIQEQMrkateeRSRLEAMERE--REMMRQIVESEKARA 589
|
|
| PspC_subgroup_1 |
NF033838 |
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ... |
748-1148 |
1.31e-04 |
|
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 46.16 E-value: 1.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 748 VHRLEVEKQQLEEALNAAREEEGNLA-AAKRALEVRLDEAQRGLARLGQEQQ-ALNRALEEegKQREALRRSKAELEEQK 825
Cdd:NF033838 35 VHAEEVRGGNNPTVTSSGNESQKEHAkEVESHLEKILSEIQKSLDKRKHTQNvALNKKLSD--IKTEYLYELNVLKEKSE 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 826 -RLLNRTVDRLNKELEQIGDDSklalqqlqAQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQ 904
Cdd:NF033838 113 aELTSKTKKELDAAFEQFKKDT--------LEPGKKVAEATKKVEEAEKKAKDQKEEDRRNYPTNTYKTLELEIAESDVE 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 905 TSQAERDTARLDkellAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLR 984
Cdd:NF033838 185 VKKAELELVKEE----AKEPRDEEKIKQAKAKVESKKAEATRLEKIKTDREKAEEEAKRRADAKLKEAVEKNVATSEQDK 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 985 TELMQERSARQDLEcdkiSLERQNKDLKTRLASSEGFQKPSASLSQlesqnqllqerlqaeerEKTVLQSTNRKLERRVK 1064
Cdd:NF033838 261 PKRRAKRGVLGEPA----TPDKKENDAKSSDSSVGEETLPSPSLKP-----------------EKKVAEAEKKVEEAKKK 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1065 ELSIQIDDERQHVNDQKDQLTLRVKALKRQVDEAEEEI-------ERLDSLRKKAQRELEEQHEVNEQLQaRIKSLEKDA 1137
Cdd:NF033838 320 AKDQKEEDRRNYPTNTYKTLELEIAESDVKVKEAELELvkeeakePRNEEKIKQAKAKVESKKAEATRLE-KIKTDRKKA 398
|
410
....*....|.
gi 1720405137 1138 WRKASRSAAES 1148
Cdd:NF033838 399 EEEAKRKAAEE 409
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
716-884 |
1.32e-04 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 45.92 E-value: 1.32e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 716 FRRRILglEQQLKEARGLAEGgEAVEARLRDKVHRLEVEKQQLEEALNAAREEEgnlaaakRALEVRLDEAQRGLARLGQ 795
Cdd:PRK12704 24 VRKKIA--EAKIKEAEEEAKR-ILEEAKKEAEAIKKEALLEAKEEIHKLRNEFE-------KELRERRNELQKLEKRLLQ 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 796 EQQALNRALE-------EEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIGddsklALQQLQAQ---MEDYKEKAR 865
Cdd:PRK12704 94 KEENLDRKLEllekreeELEKKEKELEQKQQELEKKEEELEELIEEQLQELERIS-----GLTAEEAKeilLEKVEEEAR 168
|
170 180
....*....|....*....|
gi 1720405137 866 KEVADAQRQAKDWA-SEAEK 884
Cdd:PRK12704 169 HEAAVLIKEIEEEAkEEADK 188
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
843-1134 |
1.37e-04 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 45.66 E-value: 1.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 843 GDDSKLALQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTARLDKELLAQ 922
Cdd:COG4372 1 GDRLGEKVGKARLSLFGLRPKTGILIAALSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 923 RLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKI 1002
Cdd:COG4372 81 ELEELNEQLQAAQAELAQAQEELESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLE 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1003 SLERQNKDLKTRLASSEGFQKPSASLSQL-ESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQIDDERQHVNDQK 1081
Cdd:COG4372 161 SLQEELAALEQELQALSEAEAEQALDELLkEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLD 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 1720405137 1082 DQLTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQARIKSLE 1134
Cdd:COG4372 241 ALELEEDKEELLEEVILKEIEELELAILVEKDTEEEELEIAALELEALEEAAL 293
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
810-1035 |
1.37e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 45.59 E-value: 1.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 810 QREALRRSKAELEEQKRLLNRTVDRLNKELEQIG---DDSKLALQQLQAQMEDYKE---KARKEVADAQRQAKDWASEAE 883
Cdd:COG3883 17 QIQAKQKELSELQAELEAAQAELDALQAELEELNeeyNELQAELEALQAEIDKLQAeiaEAEAEIEERREELGERARALY 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 884 KNSGGLSRLQDEL--QRLRQALQTSQAERDTARLDKELLAQrLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDE 961
Cdd:COG3883 97 RSGGSVSYLDVLLgsESFSDFLDRLSALSKIADADADLLEE-LKADKAELEAKKAELEAKLAELEALKAELEAAKAELEA 175
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1720405137 962 EKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEGFQKPSASLSQLESQN 1035
Cdd:COG3883 176 QQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAASAAGA 249
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
502-1134 |
2.24e-04 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 45.49 E-value: 2.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 502 QYQRDTEQLRRSMQDATQDHaaLEAERQKMSSLVRELQRELEETSEetghwqsMFQKNKEELRatkQELLQLRMEKEEME 581
Cdd:pfam15921 56 KYEVELDSPRKIIAYPGKEH--IERVLEEYSHQVKDLQRRLNESNE-------LHEKQKFYLR---QSVIDLQTKLQEMQ 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 582 eelgekmevLQRDlEQARASTRDTHQVEELKKELRRTQGELKELQAEQqnqevtgrhqnqvlEKQLAALREEADRGRELE 661
Cdd:pfam15921 124 ---------MERD-AMADIRRRESQSQEDLRNQLQNTVHELEAAKCLK--------------EDMLEDSNTQIEQLRKMM 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 662 QQNLQLQKTLQQLRQDCEEASKAKVASETEAMVLGQRR--ATVETTLRETQEENDEFRRRILGLEQQLkearglaeggEA 739
Cdd:pfam15921 180 LSHEGVLQEIRSILVDFEEASGKKIYEHDSMSTMHFRSlgSAISKILRELDTEISYLKGRIFPVEDQL----------EA 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 740 VEARLRDKVHRLEVEKQQLEEALNAAREeegnlaaakralevrldeaqrglarlgQEQQALNRALEEEGKQREALRRSKA 819
Cdd:pfam15921 250 LKSESQNKIELLLQQHQDRIEQLISEHE---------------------------VEITGLTEKASSARSQANSIQSQLE 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 820 ELEEQKRLLNRTVDRLNKELEQIGDDSKLALQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRL 899
Cdd:pfam15921 303 IIQEQARNQNSMYMRQLSDLESTVSQLRSELREAKRMYEDKIEELEKQLVLANSELTEARTERDQFSQESGNLDDQLQKL 382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 900 RQALQTSQAERDTARLDKELLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAE----LDEEKNTVELLTDRVNR 975
Cdd:pfam15921 383 LADLHKREKELSLEKEQNKRLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSEcqgqMERQMAAIQGKNESLEK 462
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 976 GRDQVDQLRTELMQERSARQDLECDKISL---ERQNKDLKTRLASSE-GFQKPSASLSQLESQNQLLQERLQAEEREKTV 1051
Cdd:pfam15921 463 VSSLTAQLESTKEMLRKVVEELTAKKMTLessERTVSDLTASLQEKErAIEATNAEITKLRSRVDLKLQELQHLKNEGDH 542
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1052 LQSTNRKLERRVKELSiQIDDERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQARIK 1131
Cdd:pfam15921 543 LRNVQTECEALKLQMA-EKDKVIEILRQQIENMTQLVGQHGRTAGAMQVEKAQLEKEINDRRLELQEFKILKDKKDAKIR 621
|
...
gi 1720405137 1132 SLE 1134
Cdd:pfam15921 622 ELE 624
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
892-1015 |
2.39e-04 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 44.57 E-value: 2.39e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 892 LQDELQRLRQALQTSQAERDtarldkellaqRLQGLEQEAenkkrfqddkARQLKSLEEKVSRLEAELDEEKNTVELLTD 971
Cdd:PRK09039 79 LQDSVANLRASLSAAEAERS-----------RLQALLAEL----------AGAGAAAEGRAGELAQELDSEKQVSARALA 137
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 1720405137 972 RVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRL 1015
Cdd:PRK09039 138 QVELLNQQIAALRRQLAALEAALDASEKRDRESQAKIADLGRRL 181
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
706-1128 |
2.52e-04 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 45.34 E-value: 2.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 706 LRETQEENDEFRRRILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRALEVRLDE 785
Cdd:TIGR00618 158 LKAKSKEKKELLMNLFPLDQYTQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQ 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 786 AQRGLARLGQEQQALnralEEEGKQREALRRSKAELEEQKRLLNRtVDRLNKELEQIGDDSKLALQqlQAQMEDYKEKAR 865
Cdd:TIGR00618 238 TQQSHAYLTQKREAQ----EEQLKKQQLLKQLRARIEELRAQEAV-LEETQERINRARKAAPLAAH--IKAVTQIEQQAQ 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 866 KEVADAQRQAKDWASEAEKNSGGLSRlQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAENKKRFQdDKARQL 945
Cdd:TIGR00618 311 RIHTELQSKMRSRAKLLMKRAAHVKQ-QSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQHIH-TLQQQK 388
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 946 KSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEGFQKPS 1025
Cdd:TIGR00618 389 TTLTQKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSL 468
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1026 ASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQIDDERQHVnDQKDQLTLRVKALKRQVDEAEEEIER- 1104
Cdd:TIGR00618 469 KEREQQLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDI-DNPGPLTRRMQRGEQTYAQLETSEEDv 547
|
410 420
....*....|....*....|....*..
gi 1720405137 1105 ---LDSLRKKAQRELEEQHEVNEQLQA 1128
Cdd:TIGR00618 548 yhqLTSERKQRASLKEQMQEIQQSFSI 574
|
|
| Golgin_A5 |
pfam09787 |
Golgin subfamily A member 5; Members of this family of proteins are involved in maintaining ... |
955-1117 |
2.64e-04 |
|
Golgin subfamily A member 5; Members of this family of proteins are involved in maintaining Golgi structure. They stimulate the formation of Golgi stacks and ribbons, and are involved in intra-Golgi retrograde transport. Two main interactions have been characterized: one with RAB1A that has been activated by GTP-binding and another with isoform CASP of CUTL1.
Pssm-ID: 462900 [Multi-domain] Cd Length: 305 Bit Score: 44.36 E-value: 2.64e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 955 LEAELDEEKNTVELLTDRVNRGRDQVDQLRTElMQERSARQDLECDkiSLERQNKDLKTRLASSegFQKPSASLSQLESQ 1034
Cdd:pfam09787 45 LTLELEELRQERDLLREEIQKLRGQIQQLRTE-LQELEAQQQEEAE--SSREQLQELEEQLATE--RSARREAEAELERL 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1035 NQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQIDDeRQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQR 1114
Cdd:pfam09787 120 QEELRYLEEELRRSKATLQSRIKDREAEIEKLRNQLTS-KSQSSSSQSELENRLHQLTETLIQKQTMLEALSTEKNSLVL 198
|
...
gi 1720405137 1115 ELE 1117
Cdd:pfam09787 199 QLE 201
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
342-1136 |
2.68e-04 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 45.42 E-value: 2.68e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 342 QAELTRKMEELQKKLDEEVKKrqkLEPSRVGLERQLEEKAEECHRLQELLERRKGEVQQSSKELQN------MKLLLGQE 415
Cdd:TIGR00606 285 NSELELKMEKVFQGTDEQLND---LYHNHQRTVREKERELVDCQRELEKLNKERRLLNQEKTELLVeqgrlqLQADRHQE 361
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 416 EGLRHGLEAQVKELQLKLKH-SQSPDSGKESLLKDLLDTRELLEELLEGKQ---RVEEQLRLRERELTALKGALKEEVAS 491
Cdd:TIGR00606 362 HIRARDSLIQSLATRLELDGfERGPFSERQIKNFHTLVIERQEDEAKTAAQlcaDLQSKERLKQEQADEIRDEKKGLGRT 441
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 492 HDQEVEHVRlQYQRDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQRELEETSEETGHWQSMFQKNKE-----ELRAT 566
Cdd:TIGR00606 442 IELKKEILE-KKQEELKFVIKELQQLEGSSDRILELDQELRKAERELSKAEKNSLTETLKKEVKSLQNEKadldrKLRKL 520
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 567 KQELLQLRMEKEEMEEELGEKMEVLQRDLEQARASTRDTHQV-----------------EELKKELRRTQGELKELQAEQ 629
Cdd:TIGR00606 521 DQEMEQLNHHTTTRTQMEMLTKDKMDKDEQIRKIKSRHSDELtsllgyfpnkkqledwlHSKSKEINQTRDRLAKLNKEL 600
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 630 QNQEVTGRHQNQVLEKQLAALREEADRGRELeqqnlqlqKTLQQLRQDCEEASKAKVASETEAMVLGQRRATVETTLRET 709
Cdd:TIGR00606 601 ASLEQNKNHINNELESKEEQLSSYEDKLFDV--------CGSQDEESDLERLKEEIEKSSKQRAMLAGATAVYSQFITQL 672
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 710 QEENDE---FRRRILGLEQQLKEarglaeggeaVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRALEVRLDEA 786
Cdd:TIGR00606 673 TDENQSccpVCQRVFQTEAELQE----------FISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLK 742
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 787 QRGLARLGQEQQALNRALEEE----GKQREALRRSKAELEEQKRLLNRT--VDRLNKELEQIgdDSKLALQQLQAQMEDY 860
Cdd:TIGR00606 743 EKEIPELRNKLQKVNRDIQRLkndiEEQETLLGTIMPEEESAKVCLTDVtiMERFQMELKDV--ERKIAQQAAKLQGSDL 820
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 861 K---EKARKEVADAQRQAKDWASEAEKNSgglsRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAENKKRF 937
Cdd:TIGR00606 821 DrtvQQVNQEKQEKQHELDTVVSKIELNR----KLIQDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQQFEEQLVELSTE 896
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 938 QDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVN----RGRDQVDQLRTELMQERSARQDLECD-KISLERQNKDLK 1012
Cdd:TIGR00606 897 VQSLIREIKDAKEQDSPLETFLEKDQQEKEELISSKEtsnkKAQDKVNDIKEKVKNIHGYMKDIENKiQDGKDDYLKQKE 976
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1013 TRLAssegfqKPSASLSQLESQNQllqerlqaeerektvlqstnrKLERRVKELSIQIDDERQHVNDQKDQLTLRvkalK 1092
Cdd:TIGR00606 977 TELN------TVNAQLEECEKHQE---------------------KINEDMRLMRQDIDTQKIQERWLQDNLTLR----K 1025
|
810 820 830 840
....*....|....*....|....*....|....*....|....
gi 1720405137 1093 RQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQARIKSLEKD 1136
Cdd:TIGR00606 1026 RENELKEVEEELKQHLKEMGQMQVLQMKQEHQKLEENIDLIKRN 1069
|
|
| PRK00409 |
PRK00409 |
recombination and DNA strand exchange inhibitor protein; Reviewed |
792-962 |
2.74e-04 |
|
recombination and DNA strand exchange inhibitor protein; Reviewed
Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 45.20 E-value: 2.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 792 RLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLL---NRTVDRLNKELEQIGDDSKLALQQLQAQMEDYKEKARKEV 868
Cdd:PRK00409 496 RLGLPENIIEEAKKLIGEDKEKLNELIASLEELERELeqkAEEAEALLKEAEKLKEELEEKKEKLQEEEDKLLEEAEKEA 575
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 869 ADAQRQAKdwaSEAEKnsgglsrLQDELQRLRQALQTSQAERDTARLDKElLAQRLQGLEQEAENKKRFQD-----DKAR 943
Cdd:PRK00409 576 QQAIKEAK---KEADE-------IIKELRQLQKGGYASVKAHELIEARKR-LNKANEKKEKKKKKQKEKQEelkvgDEVK 644
|
170
....*....|....*....
gi 1720405137 944 qLKSLEEKVSRLEAELDEE 962
Cdd:PRK00409 645 -YLSLGQKGEVLSIPDDKE 662
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
526-1096 |
2.76e-04 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 45.21 E-value: 2.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 526 AERQKMSSLVRELQ--RELEETSEETGHWQSMFqKNKEELRATKQELLQLRMEKEEMEEELGEKMEVLQRDLEQARASTR 603
Cdd:pfam12128 218 LNRQQVEHWIRDIQaiAGIMKIRPEFTKLQQEF-NTLESAELRLSHLHFGYKSDETLIASRQEERQETSAELNQLLRTLD 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 604 DthQVEELKKELRrtqGELKELQAEQQNQevtgRHQNQVLEKQLAALREEADRGRELEQQNLQLQKTlqqlrqDCEEASK 683
Cdd:pfam12128 297 D--QWKEKRDELN---GELSAADAAVAKD----RSELEALEDQHGAFLDADIETAAADQEQLPSWQS------ELENLEE 361
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 684 akvasETEAMVLGQRRATVETTLREtQEENDEFRRRILGLEQQLKEARGLAEGGEAVEarlRDKVHRLEVE-KQQLEEAL 762
Cdd:pfam12128 362 -----RLKALTGKHQDVTAKYNRRR-SKIKEQNNRDIAGIKDKLAKIREARDRQLAVA---EDDLQALESElREQLEAGK 432
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 763 NAAREEEGNLAAAKRALEVRLDEAQ---RGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKEl 839
Cdd:pfam12128 433 LEFNEEEYRLKSRLGELKLRLNQATatpELLLQLENFDERIERAREEQEAANAEVERLQSELRQARKRRDQASEALRQA- 511
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 840 EQIGDDSKLALQQLQAQMEdykEKARKEVADAQRQAKDWaseaeknSGGLSRLQDELQRLRQALQTSQAERDTARlDKEL 919
Cdd:pfam12128 512 SRRLEERQSALDELELQLF---PQAGTLLHFLRKEAPDW-------EQSIGKVISPELLHRTDLDPEVWDGSVGG-ELNL 580
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 920 LAQRLQgLEQEAENKKRFQDDkarqlkSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLEC 999
Cdd:pfam12128 581 YGVKLD-LKRIDVPEWAASEE------ELRERLDKAEEALQSAREKQAAAEEQLVQANGELEKASREETFARTALKNARL 653
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1000 DKISL--ERQNKDLKTRLASSEGFQKPSASLSQLESQNQLLQERLQA--EEREKTVLQSTNRKLERR---VKELSIQIDD 1072
Cdd:pfam12128 654 DLRRLfdEKQSEKDKKNKALAERKDSANERLNSLEAQLKQLDKKHQAwlEEQKEQKREARTEKQAYWqvvEGALDAQLAL 733
|
570 580
....*....|....*....|....
gi 1720405137 1073 ERQHVNDQKDQLTLRVKALKRQVD 1096
Cdd:pfam12128 734 LKAAIAARRSGAKAELKALETWYK 757
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
755-1047 |
3.25e-04 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 45.04 E-value: 3.25e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 755 KQQLEEALNAAREEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNraleEEGKQREALRRSKAELEEQKRLL--NRTV 832
Cdd:PRK10929 29 TQELEQAKAAKTPAQAEIVEALQSALNWLEERKGSLERAKQYQQVID----NFPKLSAELRQQLNNERDEPRSVppNMST 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 833 DRLNKELEQIGddSKLALQQLQAQMEdyKEKARkEVADAQRQAKDWASEAeknsgglSRLQDELQRLRQALQTSQAErdt 912
Cdd:PRK10929 105 DALEQEILQVS--SQLLEKSRQAQQE--QDRAR-EISDSLSQLPQQQTEA-------RRQLNEIERRLQTLGTPNTP--- 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 913 arldkellaqrlqgLEQEaenkkrfqddkarQLKSLEEKVSRLEAELDEekntVELLTDRVNRgRDQVDQLRTELMQERS 992
Cdd:PRK10929 170 --------------LAQA-------------QLTALQAESAALKALVDE----LELAQLSANN-RQELARLRSELAKKRS 217
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1720405137 993 ARQDLECDKI-----SLERQNKDL---KTRLASSEGFQKPSASLSQLESQNQLLQERLQAEER 1047
Cdd:PRK10929 218 QQLDAYLQALrnqlnSQRQREAERaleSTELLAEQSGDLPKSIVAQFKINRELSQALNQQAQR 280
|
|
| PRK04778 |
PRK04778 |
septation ring formation regulator EzrA; Provisional |
756-1105 |
3.66e-04 |
|
septation ring formation regulator EzrA; Provisional
Pssm-ID: 179877 [Multi-domain] Cd Length: 569 Bit Score: 44.44 E-value: 3.66e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 756 QQLEEALNAAREEegNLAAAKRALevrlDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVD-- 833
Cdd:PRK04778 86 EQLFEAEELNDKF--RFRKAKHEI----NEIESLLDLIEEDIEQILEELQELLESEEKNREEVEQLKDLYRELRKSLLan 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 834 -----RLNKELEQigddsklALQQLQAQMEDYKE--------KARKEVADAQRQAKDWASEAEKNSGGLSRLQ----DEL 896
Cdd:PRK04778 160 rfsfgPALDELEK-------QLENLEEEFSQFVEltesgdyvEAREILDQLEEELAALEQIMEEIPELLKELQtelpDQL 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 897 QRLRQALQtsQAERDTARLDKELLAQRLQGLEQEAENKKrfQDDKARQLKSLEEKVSRLEAELD----------EEKNTV 966
Cdd:PRK04778 233 QELKAGYR--ELVEEGYHLDHLDIEKEIQDLKEQIDENL--ALLEELDLDEAEEKNEEIQERIDqlydilerevKARKYV 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 967 EL----LTDRVNRGRDQVDQLRTELMQ----------ERSARQDLECDKISLERQNKDLKTRLASSEG--------FQKP 1024
Cdd:PRK04778 309 EKnsdtLPDFLEHAKEQNKELKEEIDRvkqsytlnesELESVRQLEKQLESLEKQYDEITERIAEQEIayselqeeLEEI 388
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1025 SASLSQLESQNQLLQERLQA---EERE--------KTVLQSTNRKLERR--------VKELSIQIDDERQHVNDQKDQLT 1085
Cdd:PRK04778 389 LKQLEEIEKEQEKLSEMLQGlrkDELEarekleryRNKLHEIKRYLEKSnlpglpedYLEMFFEVSDEIEALAEELEEKP 468
|
410 420
....*....|....*....|
gi 1720405137 1086 LRVKALKRQVDEAEEEIERL 1105
Cdd:PRK04778 469 INMEAVNRLLEEATEDVETL 488
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
951-1119 |
3.85e-04 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 43.37 E-value: 3.85e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 951 KVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEGFQKPSASLSQ 1030
Cdd:COG1579 11 DLQELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNNKE 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1031 LESqnqlLQERLQAEEREKTVLQSTNRKLERRVKELSIQIDDERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRK 1110
Cdd:COG1579 91 YEA----LQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAERE 166
|
....*....
gi 1720405137 1111 KAQRELEEQ 1119
Cdd:COG1579 167 ELAAKIPPE 175
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
313-1144 |
3.92e-04 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 45.04 E-value: 3.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 313 EGSSESEASVRRKVSLVLEQMQPLGALAGQaeltrKMEELQKKLDEEVKKRQKLEPSRVGLERQLEEKAEECHRLQELLE 392
Cdd:TIGR00606 383 ERGPFSERQIKNFHTLVIERQEDEAKTAAQ-----LCADLQSKERLKQEQADEIRDEKKGLGRTIELKKEILEKKQEELK 457
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 393 RRKGEVQQSSKelqNMKLLLGQEEGLRHGLeaqvKELQLKLKHSQSpdsgkESLLKDLLDTRELLEELLEGKQRVEEQLR 472
Cdd:TIGR00606 458 FVIKELQQLEG---SSDRILELDQELRKAE----RELSKAEKNSLT-----ETLKKEVKSLQNEKADLDRKLRKLDQEME 525
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 473 LRERELTALKG--ALKEEVASHDQEVEHVRLQYQRDTEQLRRSMQDATQDHAALEA---ERQKMSSLVRELQRELEETSE 547
Cdd:TIGR00606 526 QLNHHTTTRTQmeMLTKDKMDKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSkskEINQTRDRLAKLNKELASLEQ 605
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 548 ETGHWqsmfqkNKEELRATKQELlqlrmekeemeeelgekmeVLQRDLEQARASTRDTHQVEELKKELRRTQGELKELQA 627
Cdd:TIGR00606 606 NKNHI------NNELESKEEQLS-------------------SYEDKLFDVCGSQDEESDLERLKEEIEKSSKQRAMLAG 660
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 628 -----EQQNQEVTGRHQN--QVLEKQLAALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAMVLGQRRA 700
Cdd:TIGR00606 661 atavySQFITQLTDENQSccPVCQRVFQTEAELQEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSIID 740
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 701 TVETTLRETQEENDEFRRRILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLEEAlnaareEEGNLAAAKRALE 780
Cdd:TIGR00606 741 LKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVTIMERFQMEL------KDVERKIAQQAAK 814
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 781 VRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIGDdsklALQQLQaQMEDY 860
Cdd:TIGR00606 815 LQGSDLDRTVQQVNQEKQEKQHELDTVVSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQIGT----NLQRRQ-QFEEQ 889
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 861 KEKARKEVADAQRQAKDwasEAEKNSGGLSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAEN-KKRFQD 939
Cdd:TIGR00606 890 LVELSTEVQSLIREIKD---AKEQDSPLETFLEKDQQEKEELISSKETSNKKAQDKVNDIKEKVKNIHGYMKDiENKIQD 966
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 940 DKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDqlrTELMQERSARQDLECDKIslERQNKDLKTRLASSE 1019
Cdd:TIGR00606 967 GKDDYLKQKETELNTVNAQLEECEKHQEKINEDMRLMRQDID---TQKIQERWLQDNLTLRKR--ENELKEVEEELKQHL 1041
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1020 GfQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQIDDERQHVNDQKDQLTLRVKALkrqvdeAE 1099
Cdd:TIGR00606 1042 K-EMGQMQVLQMKQEHQKLEENIDLIKRNHVLALGRQKGYEKEIKHFKKELREPQFRDAEEKYREMMIVMRT------TE 1114
|
810 820 830 840
....*....|....*....|....*....|....*....|....*
gi 1720405137 1100 EEIERLDSLRKKAQRELEEQHEVNeqlQARIKSLEKDAWRKASRS 1144
Cdd:TIGR00606 1115 LVNKDLDIYYKTLDQAIMKFHSMK---MEEINKIIRDLWRSTYRG 1156
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
679-1016 |
6.05e-04 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 43.74 E-value: 6.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 679 EEASKAKVASETEAMVLGQRRATVETTLRETQEENDEFRRRILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQL 758
Cdd:COG4372 6 EKVGKARLSLFGLRPKTGILIAALSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEEL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 759 EEALNAAREEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKE 838
Cdd:COG4372 86 NEQLQAAQAELAQAQEELESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEE 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 839 LEQIGddsklalQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTARLDKE 918
Cdd:COG4372 166 LAALE-------QELQALSEAEAEQALDELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSAL 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 919 LLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLE 998
Cdd:COG4372 239 LDALELEEDKEELLEEVILKEIEELELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALL 318
|
330
....*....|....*...
gi 1720405137 999 CDKISLERQNKDLKTRLA 1016
Cdd:COG4372 319 AALLELAKKLELALAILL 336
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
596-1136 |
6.29e-04 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 44.19 E-value: 6.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 596 EQARASTRDTHQVEELKKELRRTQGELKELQAEQQNQEVTGRhqNQVLEKQLAALREEADRGRELEQQNLQLQKtlqqlr 675
Cdd:TIGR00618 179 TQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHER--KQVLEKELKHLREALQQTQQSHAYLTQKRE------ 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 676 qDCEEASKAKVAseteamvLGQRRATVEtTLRETQEENDEFRRRIlglEQQLKEARgLAEGGEAVEaRLRDKVHRLEVEK 755
Cdd:TIGR00618 251 -AQEEQLKKQQL-------LKQLRARIE-ELRAQEAVLEETQERI---NRARKAAP-LAAHIKAVT-QIEQQAQRIHTEL 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 756 QQLEEALNAAREEEGNLAAAKRALEvrldEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLlnRTVDRL 835
Cdd:TIGR00618 317 QSKMRSRAKLLMKRAAHVKQQSSIE----EQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQHIHTL--QQQKTT 390
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 836 NKELEQIGDDSKLALQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTARL 915
Cdd:TIGR00618 391 LTQKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKE 470
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 916 DKELLAQRLQGLEQEAENKK---RFQDDKARQLKSLEEKVSRLEAELDEEKNTvELLTDRVNRGRDQVDQLRTELMQERS 992
Cdd:TIGR00618 471 REQQLQTKEQIHLQETRKKAvvlARLLELQEEPCPLCGSCIHPNPARQDIDNP-GPLTRRMQRGEQTYAQLETSEEDVYH 549
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 993 ARQDLECDKISLERQNKDLK-TRLASSEGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRvKELSIQID 1071
Cdd:TIGR00618 550 QLTSERKQRASLKEQMQEIQqSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHALLRK-LQPEQDLQ 628
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1720405137 1072 DERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQHEVNE--QLQARIKSLEKD 1136
Cdd:TIGR00618 629 DVRLHLQQCSQELALKLTALHALQLTLTQERVREHALSIRVLPKELLASRQLAlqKMQSEKEQLTYW 695
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
1031-1145 |
6.95e-04 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 43.61 E-value: 6.95e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1031 LESQNQLLQERLQAEeREKTVLQSTNRKLERRVKELSIQIDDERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRK 1110
Cdd:PRK12704 60 LEAKEEIHKLRNEFE-KELRERRNELQKLEKRLLQKEENLDRKLELLEKREEELEKKEKELEQKQQELEKKEEELEELIE 138
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 1720405137 1111 KAQRELEE-----------------QHEVNEQLQARIKSLEKDAWRKASRSA 1145
Cdd:PRK12704 139 EQLQELERisgltaeeakeillekvEEEARHEAAVLIKEIEEEAKEEADKKA 190
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
591-815 |
8.25e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 43.47 E-value: 8.25e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 591 LQRDLEQARASTRDT-----HQVEELKKELRRTQGELKELQaeQQNQEVTGRHQNQVLEKQLAALREEADRGReLEQQNL 665
Cdd:COG3206 162 LEQNLELRREEARKAlefleEQLPELRKELEEAEAALEEFR--QKNGLVDLSEEAKLLLQQLSELESQLAEAR-AELAEA 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 666 QLQKTLQQLRQDCEEASKAKVASETEAMVLGQRRATVETTLRETQEENDEFRRRILGLEQQLKEARglaeggEAVEARLR 745
Cdd:COG3206 239 EARLAALRAQLGSGPDALPELLQSPVIQQLRAQLAELEAELAELSARYTPNHPDVIALRAQIAALR------AQLQQEAQ 312
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 746 DKVHRLEVEKQQLEEALNAAREEegnLAAAKRALEvRLDEAQRGLARLGQEQQALNRALEEEGKQREALR 815
Cdd:COG3206 313 RILASLEAELEALQAREASLQAQ---LAQLEARLA-ELPELEAELRRLEREVEVARELYESLLQRLEEAR 378
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
608-1067 |
9.28e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 43.79 E-value: 9.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 608 VEELKKELRRTQGELKELQAEQQN-QEVTGRHQNQVlekqlAA--LREEADRGRELEQQNlqlqktlqqlrqdceEASKA 684
Cdd:PRK04863 235 MEAALRENRMTLEAIRVTQSDRDLfKHLITESTNYV-----AAdyMRHANERRVHLEEAL---------------ELRRE 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 685 KVASETEamvlgqrRATVETTLRETQEENDEFRRRILGLEQQLK----------EARGLAEGGEAVEARLRDKVHRLEVE 754
Cdd:PRK04863 295 LYTSRRQ-------LAAEQYRLVEMARELAELNEAESDLEQDYQaasdhlnlvqTALRQQEKIERYQADLEELEERLEEQ 367
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 755 KQQLEEalnaAREEEGNLAAAKRALEVRLDEAQRGLA-----------RLGQEQQALnRALEEEGK--QREALRRSKAE- 820
Cdd:PRK04863 368 NEVVEE----ADEQQEENEARAEAAEEEVDELKSQLAdyqqaldvqqtRAIQYQQAV-QALERAKQlcGLPDLTADNAEd 442
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 821 -LEEQKRLLNRTVDRLNkELEQIGDDSKLALQQLQAQMedykEKARKEVADAQR-QAKDWASEAEKNSGGLSRLQDELQR 898
Cdd:PRK04863 443 wLEEFQAKEQEATEELL-SLEQKLSVAQAAHSQFEQAY----QLVRKIAGEVSRsEAWDVARELLRRLREQRHLAEQLQQ 517
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 899 LRQAL----QTSQAERDTARLDKELLAQRLQGLEQEAEnkkrfqddkarqlksLEEKVSRLEAELDEEKNTVELLTDRVN 974
Cdd:PRK04863 518 LRMRLseleQRLRQQQRAERLLAEFCKRLGKNLDDEDE---------------LEQLQEELEARLESLSESVSEARERRM 582
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 975 RGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEgfqkpsaslsQLESQNQLLQERLQAEEREKTVLQS 1054
Cdd:PRK04863 583 ALRQQLEQLQARIQRLAARAPAWLAAQDALARLREQSGEEFEDSQ----------DVTEYMQQLLERERELTVERDELAA 652
|
490
....*....|...
gi 1720405137 1055 TNRKLERRVKELS 1067
Cdd:PRK04863 653 RKQALDEEIERLS 665
|
|
| EzrA |
pfam06160 |
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like ... |
714-1107 |
1.06e-03 |
|
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerizes into a ring structure that establishes the location of the nascent division site. EzrA modulates the frequency and position of FtsZ ring formation. The structure contains 5 spectrin like alpha helical repeats.
Pssm-ID: 428797 [Multi-domain] Cd Length: 542 Bit Score: 42.92 E-value: 1.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 714 DEFRRRILGLEQQLKEARGLAEGGEAVEARlrDKVHRLEVEKQQLEEALNAAREEegnLAAAKRALEVRLDEAQRGLARL 793
Cdd:pfam06160 149 DELEKQLAEIEEEFSQFEELTESGDYLEAR--EVLEKLEEETDALEELMEDIPPL---YEELKTELPDQLEELKEGYREM 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 794 GQEQQAL-NRALEEEGKQ-REALRRSKAELEEQKrllnrtVDRLNKELEQIGDDsklaLQQLQAQMEdyKE-KARKEVAD 870
Cdd:pfam06160 224 EEEGYALeHLNVDKEIQQlEEQLEENLALLENLE------LDEAEEALEEIEER----IDQLYDLLE--KEvDAKKYVEK 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 871 AQRQAKDWASEAEKNSgglSRLQDELQRLRQALQTSQAErdtarldkellAQRLQGLEqeaenkkrfqddkaRQLKSLEE 950
Cdd:pfam06160 292 NLPEIEDYLEHAEEQN---KELKEELERVQQSYTLNENE-----------LERVRGLE--------------KQLEELEK 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 951 KVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLrtelmqersarqdlecdkislERQNKDLKTRLASsegfqkpsaslsq 1030
Cdd:pfam06160 344 RYDEIVERLEEKEVAYSELQEELEEILEQLEEI---------------------EEEQEEFKESLQS------------- 389
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1031 LESQNQLLQERLQaeeREKTVLQSTNRKLERR--------VKELSIQIDDERQHVNDQKDQLTLRVKALKRQVDEAEEEI 1102
Cdd:pfam06160 390 LRKDELEAREKLD---EFKLELREIKRLVEKSnlpglpesYLDYFFDVSDEIEDLADELNEVPLNMDEVNRLLDEAQDDV 466
|
....*
gi 1720405137 1103 ERLDS 1107
Cdd:pfam06160 467 DTLYE 471
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
702-913 |
1.20e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 42.51 E-value: 1.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 702 VETTLRETQEENDEFRRRILGLEQQLKEARGLAEggeaveaRLRDKVHRLEVEKQQLEEALNAAREEegnLAAAKRALEV 781
Cdd:COG3883 21 KQKELSELQAELEAAQAELDALQAELEELNEEYN-------ELQAELEALQAEIDKLQAEIAEAEAE---IEERREELGE 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 782 RLDEAQRGLARLG---------------QEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIgDDS 846
Cdd:COG3883 91 RARALYRSGGSVSyldvllgsesfsdflDRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAEL-EAA 169
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1720405137 847 KLALQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTA 913
Cdd:COG3883 170 KAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAA 236
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
912-1149 |
1.37e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 42.51 E-value: 1.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 912 TARLDKELLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELmqER 991
Cdd:COG3883 13 FADPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREEL--GE 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 992 SARQdlecdkISLERQNKDLKTRLASSEGFQ---KPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELSI 1068
Cdd:COG3883 91 RARA------LYRSGGSVSYLDVLLGSESFSdflDRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKA 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1069 QIDDERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQARIKSLEKDAWRKASRSAAES 1148
Cdd:COG3883 165 ELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 244
|
.
gi 1720405137 1149 A 1149
Cdd:COG3883 245 S 245
|
|
| PRK12705 |
PRK12705 |
hypothetical protein; Provisional |
1006-1145 |
1.73e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 237178 [Multi-domain] Cd Length: 508 Bit Score: 42.39 E-value: 1.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1006 RQNKDLKTRLASSEGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRkLERRVKELSIQIDDERQHVNDQKDQLT 1085
Cdd:PRK12705 30 RLAKEAERILQEAQKEAEEKLEAALLEAKELLLRERNQQRQEARREREELQR-EEERLVQKEEQLDARAEKLDNLENQLE 108
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1086 LRVKALKRQVDEAEEEIERLD-------SLRKKAQREL---EEQHEVNEQLQARIKSLEKDAWRKASRSA 1145
Cdd:PRK12705 109 EREKALSARELELEELEKQLDnelyrvaGLTPEQARKLllkLLDAELEEEKAQRVKKIEEEADLEAERKA 178
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
853-975 |
2.05e-03 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 42.15 E-value: 2.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 853 LQAQMEDYKEKARKEvadAQRQAKDWASEAEKNSGGLSRLQDELQRLRQalQTSQAERDTARLDKEL--LAQRLQGLEQE 930
Cdd:COG2433 382 LEELIEKELPEEEPE---AEREKEHEERELTEEEEEIRRLEEQVERLEA--EVEELEAELEEKDERIerLERELSEARSE 456
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 1720405137 931 AENKKRfqddKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNR 975
Cdd:COG2433 457 ERREIR----KDREISRLDREIERLERELEEERERIEELKRKLER 497
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
805-1124 |
2.06e-03 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 42.58 E-value: 2.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 805 EEEGKQREALRRSKAELEEQKRLLNrTVDRLNKELEQIGDDSKLAL---QQLQAQMEDYKEKARKEVADAQRQAKDWASE 881
Cdd:PRK01156 325 HAIIKKLSVLQKDYNDYIKKKSRYD-DLNNQILELEGYEMDYNSYLksiESLKKKIEEYSKNIERMSAFISEILKIQEID 403
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 882 AEKNSGGLSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEA-----------ENKKRFQDDKARQLKSLEE 950
Cdd:PRK01156 404 PDAIKKELNEINVKLQDISSKVSSLNQRIRALRENLDELSRNMEMLNGQSvcpvcgttlgeEKSNHIINHYNEKKSRLEE 483
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 951 KVSRLEAE---LDEEKNTVELLTDRVNRGrdQVDQLRTELMQERSARQDLECDKISLER-QNKDLKTRLASSegfQKPSA 1026
Cdd:PRK01156 484 KIREIEIEvkdIDEKIVDLKKRKEYLESE--EINKSINEYNKIESARADLEDIKIKINElKDKHDKYEEIKN---RYKSL 558
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1027 SLSQLESQN----QLLQER----LQAEEREKTVLQSTNRKLERRVKELSIQIDDERQHVNDQKDQLTLRVKALKRQVDEA 1098
Cdd:PRK01156 559 KLEDLDSKRtswlNALAVIslidIETNRSRSNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSIREIENEANNLNNKYNEI 638
|
330 340
....*....|....*....|....*.
gi 1720405137 1099 EEEIERLDSLRKKAQRELEEQHEVNE 1124
Cdd:PRK01156 639 QENKILIEKLRGKIDNYKKQIAEIDS 664
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
966-1141 |
2.08e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 42.06 E-value: 2.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 966 VELLTDRVNRGRDQVDQLRTELMQERSARQDLEcdkiSLERQNKDLKTRLASSEGFQK---PSASLSQLESQNQLLQERL 1042
Cdd:COG4717 73 LKELEEELKEAEEKEEEYAELQEELEELEEELE----ELEAELEELREELEKLEKLLQllpLYQELEALEAELAELPERL 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1043 QAEEREKTVLQStnrkLERRVKELSIQIDDERQHVNDQKDQLTLrvkALKRQVDEAEEEIERLDSLRKKAQRELEEQHEV 1122
Cdd:COG4717 149 EELEERLEELRE----LEEELEELEAELAELQEELEELLEQLSL---ATEEELQDLAEELEELQQRLAELEEELEEAQEE 221
|
170
....*....|....*....
gi 1720405137 1123 NEQLQARIKSLEKDAWRKA 1141
Cdd:COG4717 222 LEELEEELEQLENELEAAA 240
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
555-932 |
2.10e-03 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 42.19 E-value: 2.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 555 MFQKNKEELRATKQELLQLRMEKEEMEEELGEKMEVLQRDLEQARASTRDthQVEELKKELRRTQGELKELQAEQQNQEV 634
Cdd:pfam07888 31 LLQNRLEECLQERAELLQAQEAANRQREKEKERYKRDREQWERQRRELES--RVAELKEELRQSREKHEELEEKYKELSA 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 635 TGRHQNQVLEKQLAALREEADRGRELEQqnlqlqktlqqlrqDCEEASKAKVASETEAMVLGQRRATVETTLRETQEEND 714
Cdd:pfam07888 109 SSEELSEEKDALLAQRAAHEARIRELEE--------------DIKTLTQRVLERETELERMKERAKKAGAQRKEEEAERK 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 715 EFRRRILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAK---RALEVRLDEAQRGLA 791
Cdd:pfam07888 175 QLQAKLQQTEEELRSLSKEFQELRNSLAQRDTQVLQLQDTITTLTQKLTTAHRKEAENEALLeelRSLQERLNASERKVE 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 792 RLGQEQQAL----NRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKE---LEQIGDDSKLALQQLQAQMEDYKEKA 864
Cdd:pfam07888 255 GLGEELSSMaaqrDRTQAELHQARLQAAQLTLQLADASLALREGRARWAQEretLQQSAEADKDRIEKLSAELQRLEERL 334
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1720405137 865 RKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAE 932
Cdd:pfam07888 335 QEERMEREKLEVELGREKDCNRVQLSESRRELQELKASLRVAQKEKEQLQAEKQELLEYIRQLEQRLE 402
|
|
| DUF4175 |
pfam13779 |
Domain of unknown function (DUF4175); |
706-909 |
2.14e-03 |
|
Domain of unknown function (DUF4175);
Pssm-ID: 463981 [Multi-domain] Cd Length: 833 Bit Score: 42.28 E-value: 2.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 706 LRETQEENDEFRRR------ILGLEQQLKEA-----RGLAE--GGEAVEARLRDKVHRLEVEKQQLEEALNAARE--EEG 770
Cdd:pfam13779 491 LRAAQERLSEALERgasdeeIAKLMQELREAlddymQALAEqaQQNPQDLQQPDDPNAQEMTQQDLQRMLDRIEElaRSG 570
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 771 NLAAAKRalevRLDEAQRGLARL--GQEQQALNRALEEEGKQREALRRSkaeLEEQKRLLNRTVDRLNKELEQIGDDSKL 848
Cdd:pfam13779 571 RRAEAQQ----MLSQLQQMLENLqaGQPQQQQQQGQSEMQQAMDELGDL---LREQQQLLDETFRQLQQQGGQQQGQPGQ 643
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720405137 849 ALQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAE 909
Cdd:pfam13779 644 QGQQGQGQQPGQGGQQPGAQMPPQGGAEALGDLAERQQALRRRLEELQDELKELGGKEPGQ 704
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
508-842 |
2.67e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 42.25 E-value: 2.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 508 EQLRRSMQDATQDHAALEAERQKMSSLVRELQRELeetseeTGHWQSMFQKNKE-ELRATKQELLQL-----RMEKEEME 581
Cdd:PRK04863 789 EQLRAEREELAERYATLSFDVQKLQRLHQAFSRFI------GSHLAVAFEADPEaELRQLNRRRVELeralaDHESQEQQ 862
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 582 EELGEKMEVLQRDLEQARASTRDTHQVEELKKELRRTQGELKELQAEQQNQEVTGRHQNQvLEKQLAALREEADRGRELE 661
Cdd:PRK04863 863 QRSQLEQAKEGLSALNRLLPRLNLLADETLADRVEEIREQLDEAEEAKRFVQQHGNALAQ-LEPIVSVLQSDPEQFEQLK 941
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 662 QQNLQLQKTLqqlrqdceEASKAKVASETEAMvlgQRRA-----TVETTLRETQEENDEFRRRILGLEQQLKEARglaEG 736
Cdd:PRK04863 942 QDYQQAQQTQ--------RDAKQQAFALTEVV---QRRAhfsyeDAAEMLAKNSDLNEKLRQRLEQAEQERTRAR---EQ 1007
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 737 GEAVEARLRDKVHRLevekQQLEEALNAAREeegNLAAAKRALE---VRLDEAQRGLARLGQEQqaLNRALEEEGKQREA 813
Cdd:PRK04863 1008 LRQAQAQLAQYNQVL----ASLKSSYDAKRQ---MLQELKQELQdlgVPADSGAEERARARRDE--LHARLSANRSRRNQ 1078
|
330 340
....*....|....*....|....*....
gi 1720405137 814 LRRSKAELEEQKRLLNRTVDRLNKELEQI 842
Cdd:PRK04863 1079 LEKQLTFCEAEMDNLTKKLRKLERDYHEM 1107
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
707-969 |
2.74e-03 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 41.96 E-value: 2.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 707 RETQEENDEFRR---RILGLEQQLKEA-RGLAEggeaVEARLRDkvhrLEVEKQQLEEALNAAREEEgnlAAAKRA---- 778
Cdd:PRK10929 123 RQAQQEQDRAREisdSLSQLPQQQTEArRQLNE----IERRLQT----LGTPNTPLAQAQLTALQAE---SAALKAlvde 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 779 LEV--------------RLDEAQRGLARLGQEQQALNRALEEEgKQRE---ALRRSKAELEEQKRLLNRTVD--RLNKEL 839
Cdd:PRK10929 192 LELaqlsannrqelarlRSELAKKRSQQLDAYLQALRNQLNSQ-RQREaerALESTELLAEQSGDLPKSIVAqfKINREL 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 840 EQigddsklALQQlQAQMEDykekarkEVADAQRQAkdwASEAEKNSGGLSRLQDELQ------RLRQALQTsQAER--- 910
Cdd:PRK10929 271 SQ-------ALNQ-QAQRMD-------LIASQQRQA---ASQTLQVRQALNTLREQSQwlgvsnALGEALRA-QVARlpe 331
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1720405137 911 --DTARLDKELLAQRLQGLEQEAENKKRFQDDKARQ-----LKSLEEKVsrLEAELDEEKNTVELL 969
Cdd:PRK10929 332 mpKPQQLDTEMAQLRVQRLRYEDLLNKQPQLRQIRQadgqpLTAEQNRI--LDAQLRTQRELLNSL 395
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
343-828 |
3.62e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 41.56 E-value: 3.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 343 AELTRKMEELQKKLDEEVKKRQKLEPSRVGLERQLEEKAEECHRLQELLERRKGEVQQSSKELQNmklLLGQEEGLRHGL 422
Cdd:PRK02224 254 ETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREE---LEDRDEELRDRL 330
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 423 EAQVKELQLKLKHSQSPDSGKESLLKDLLDTRELLEELLEGKQRVEEQLRLRERELTALKGALKE-EVASHDQEVEHVRL 501
Cdd:PRK02224 331 EECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEElRERFGDAPVDLGNA 410
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 502 QYQRdtEQLRRSMQDATQDHAALEAERQKMSSLVRELQRELEETS--------EETGHWQSMFQKN--KEELRAtkqELL 571
Cdd:PRK02224 411 EDFL--EELREERDELREREAELEATLRTARERVEEAEALLEAGKcpecgqpvEGSPHVETIEEDRerVEELEA---ELE 485
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 572 QLRMEKEEmeeelgekmevLQRDLEQARASTRDTHQVEELkKELRRTQGELKELQAEQQNQEvtgrhqnqvlEKQLAALR 651
Cdd:PRK02224 486 DLEEEVEE-----------VEERLERAEDLVEAEDRIERL-EERREDLEELIAERRETIEEK----------RERAEELR 543
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 652 EEADrgrELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAMVLGQRRATVEtTLRETQEENDEFRRRILGLEQQLKEar 731
Cdd:PRK02224 544 ERAA---ELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESLE-RIRTLLAAIADAEDEIERLREKREA-- 617
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 732 gLAEGGEAVEARLRDKVHRleveKQQLEEALNAAREEE--GNLAAAKRALEvRLDEAQRGLARLGQEQQALNRALEEEGK 809
Cdd:PRK02224 618 -LAELNDERRERLAEKRER----KRELEAEFDEARIEEarEDKERAEEYLE-QVEEKLDELREERDDLQAEIGAVENELE 691
|
490
....*....|....*....
gi 1720405137 810 QREALRRSKAELEEQKRLL 828
Cdd:PRK02224 692 ELEELRERREALENRVEAL 710
|
|
| ADIP |
pfam11559 |
Afadin- and alpha -actinin-Binding; This family is found in mammals where it is localized at ... |
1004-1105 |
3.90e-03 |
|
Afadin- and alpha -actinin-Binding; This family is found in mammals where it is localized at cell-cell adherens junctions, and in Sch. pombe and other fungi where it anchors spindle-pole bodies to spindle microtubules. It is a coiled-coil structure, and in pombe, it is required for anchoring the minus end of spindle microtubules to the centrosome equivalent, the spindle-pole body. The name ADIP derives from the family being composed of Afadin- and alpha -Actinin-Binding Proteins localized at Cell-Cell Adherens Junctions.
Pssm-ID: 463295 [Multi-domain] Cd Length: 151 Bit Score: 39.22 E-value: 3.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1004 LERQNKDLKTRLASSEGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQIDDERQHVNDQKDQ 1083
Cdd:pfam11559 44 LQQRDRDLEFRESLNETIRTLEAEIERLQSKIERLKTQLEDLERELALLQAKERQLEKKLKTLEQKLKNEKEELQRLKNA 123
|
90 100
....*....|....*....|..
gi 1720405137 1084 LTLRVKALKRQVDEAEEEIERL 1105
Cdd:pfam11559 124 LQQIKTQFAHEVKKRDREIEKL 145
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
819-987 |
3.96e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 40.29 E-value: 3.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 819 AELEEQKRLLN-RTVDRLNKELEQIGDDSKLALQQLQAQMEdykeKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQ 897
Cdd:COG1579 1 AMPEDLRALLDlQELDSELDRLEHRLKELPAELAELEDELA----ALEARLEAAKTELEDLEKEIKRLELEIEEVEARIK 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 898 RLRQALQTSQAERDTARLDKEL--LAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNR 975
Cdd:COG1579 77 KYEEQLGNVRNNKEYEALQKEIesLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEA 156
|
170
....*....|..
gi 1720405137 976 GRDQVDQLRTEL 987
Cdd:COG1579 157 ELEELEAEREEL 168
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
708-1081 |
3.99e-03 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 41.43 E-value: 3.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 708 ETQEENDEFRRRILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRALEVRLDEAQ 787
Cdd:PRK01156 343 KKKSRYDDLNNQILELEGYEMDYNSYLKSIESLKKKIEEYSKNIERMSAFISEILKIQEIDPDAIKKELNEINVKLQDIS 422
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 788 RGLARLGQEQQALNRALEEEGKQREAL------------------RRSKAELEEQKRLLNRTVDRLNKELEQIgDDSKLA 849
Cdd:PRK01156 423 SKVSSLNQRIRALRENLDELSRNMEMLngqsvcpvcgttlgeeksNHIINHYNEKKSRLEEKIREIEIEVKDI-DEKIVD 501
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 850 LQQLQAQMEdyKEKARKEVADaQRQAKDWASEAEKNSGGLSRLQDelqrlrQALQTSQAERDTARLDKELLAQR----LQ 925
Cdd:PRK01156 502 LKKRKEYLE--SEEINKSINE-YNKIESARADLEDIKIKINELKD------KHDKYEEIKNRYKSLKLEDLDSKrtswLN 572
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 926 GLEQ----EAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQdlecdk 1001
Cdd:PRK01156 573 ALAVisliDIETNRSRSNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSIREIENEANNLNNKYNEIQENKILIE------ 646
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1002 iSLERQNKDLKTRLASSEGFQKP----SASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQIDDERQHV 1077
Cdd:PRK01156 647 -KLRGKIDNYKKQIAEIDSIIPDlkeiTSRINDIEDNLKKSRKALDDAKANRARLESTIEILRTRINELSDRINDINETL 725
|
....
gi 1720405137 1078 NDQK 1081
Cdd:PRK01156 726 ESMK 729
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
737-1101 |
4.98e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 40.66 E-value: 4.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 737 GEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRR 816
Cdd:COG4372 1 GDRLGEKVGKARLSLFGLRPKTGILIAALSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 817 SKAELEEQKRLLNRTVDRLNKELEQIGDDSKLALQQLQA------QMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLS 890
Cdd:COG4372 81 ELEELNEQLQAAQAELAQAQEELESLQEEAEELQEELEElqkerqDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLE 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 891 RLQDELQRLRQALQTSQAERDTARLDkELLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLT 970
Cdd:COG4372 161 SLQEELAALEQELQALSEAEAEQALD-ELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 971 DRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEGFQKPSASLSQLESQNQLLQERLQAEEREKT 1050
Cdd:COG4372 240 DALELEEDKEELLEEVILKEIEELELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLA 319
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 1720405137 1051 VLQSTNRKLERRVKELSIQIDDERQHVNDQKDQLTLRVKALKRQVDEAEEE 1101
Cdd:COG4372 320 ALLELAKKLELALAILLAELADLLQLLLVGLLDNDVLELLSKGAEAGVADG 370
|
|
| CusB_dom_1 |
pfam00529 |
Cation efflux system protein CusB domain 1; The cation efflux system protein CusB from E. coli ... |
757-923 |
6.82e-03 |
|
Cation efflux system protein CusB domain 1; The cation efflux system protein CusB from E. coli can be divided into four different domains, the first three domains of the protein are mostly beta-strands and the fourth forms an all alpha-helical domain. This entry represents the first beta-domain (domain 1) of CusB and it is formed by the N and C-terminal ends of the polypeptide (residues 89-102 and 324-385). CusB is part of the copper-transporting efflux system CusCFBA. This domain can also be found in other membrane-fusion proteins, such as HlyD, MdtN, MdtE and AaeA. HlyD is a component of the prototypical alpha-haemolysin (HlyA) bacterial type I secretion system, along with the other components HlyB and TolC. HlyD is anchored in the cytoplasmic membrane by a single transmembrane domain and has a large periplasmic domain within the carboxy-terminal 100 amino acids, HlyB and HlyD form a stable complex that binds the recombinant protein bearing a C-terminal HlyA signal sequence and ATP in the cytoplasm. HlyD, HlyB and TolC combine to form the three-component ABC transporter complex that forms a trans-membrane channel or pore through which HlyA can be transferred directly to the extracellular medium. Cutinase has been shown to be transported effectively through this pore.
Pssm-ID: 425733 [Multi-domain] Cd Length: 322 Bit Score: 40.10 E-value: 6.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 757 QLEEALNAAREEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLN 836
Cdd:pfam00529 55 DYQAALDSAEAQLAKAQAQVARLQAELDRLQALESELAISRQDYDGATAQLRAAQAAVKAAQAQLAQAQIDLARRRVLAP 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 837 keleqIGDDSKLALQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNsggLSRLQDELQRLRQALQTSQAERDTARLD 916
Cdd:pfam00529 135 -----IGGISRESLVTAGALVAQAQANLLATVAQLDQIYVQITQSAAEN---QAEVRSELSGAQLQIAEAEAELKLAKLD 206
|
....*..
gi 1720405137 917 KELLAQR 923
Cdd:pfam00529 207 LERTEIR 213
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
865-1136 |
6.97e-03 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 40.48 E-value: 6.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 865 RKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTARLDKELlaqrlqGLEQEAENKKRFQDDKARQ 944
Cdd:pfam05483 161 KETCARSAEKTKKYEYEREETRQVYMDLNNNIEKMILAFEELRVQAENARLEMHF------KLKEDHEKIQHLEEEYKKE 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 945 LKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEGFQKP 1024
Cdd:pfam05483 235 INDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKANQLEEKTKLQDENLKELIEKKDHLTKELEDIKMSLQRSMSTQKA 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1025 SASLSQLESQN--QLLQER---LQAEEREKTVLQSTNRKLERRVKELSIQIDDERQHVNDQKDQLTLRVKALKRQVDEAE 1099
Cdd:pfam05483 315 LEEDLQIATKTicQLTEEKeaqMEELNKAKAAHSFVVTEFEATTCSLEELLRTEQQRLEKNEDQLKIITMELQKKSSELE 394
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 1720405137 1100 E----------EIERLDSLRKKAQRELEEQHEVnEQLQARIKSLEKD 1136
Cdd:pfam05483 395 EmtkfknnkevELEELKKILAEDEKLLDEKKQF-EKIAEELKGKEQE 440
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
792-1135 |
7.21e-03 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 40.66 E-value: 7.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 792 RLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDrlNKELEQIGDDSKLALQQLQAQMEDYKEKARKEVADA 871
Cdd:PLN02939 30 RLAVSCRARRRGFSSQQKKKRGKNIAPKQRSSNSKLQSNTDE--NGQLENTSLRTVMELPQKSTSSDDDHNRASMQRDEA 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 872 QRQAKDWASEAEKNSGGLSRLQdeLQRLRQALQTsqAERDTARLDKELLaQRLQGLEQEAENKKRFQddkaRQLKSLEEK 951
Cdd:PLN02939 108 IAAIDNEQQTNSKDGEQLSDFQ--LEDLVGMIQN--AEKNILLLNQARL-QALEDLEKILTEKEALQ----GKINILEMR 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 952 VSRLEAELD---EEKNTVELLtdrvnrgRDQVDQLRTELMQERSArqdlecdkislerqnkdlktrlaSSEGFQKPSASL 1028
Cdd:PLN02939 179 LSETDARIKlaaQEKIHVEIL-------EEQLEKLRNELLIRGAT-----------------------EGLCVHSLSKEL 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1029 SQLESQNQLLQ-----------------ERLQAEEREKTVLQSTNRKLERRvkeLSIQIDDERQHVNDQKDQLTLRVKAL 1091
Cdd:PLN02939 229 DVLKEENMLLKddiqflkaelievaeteERVFKLEKERSLLDASLRELESK---FIVAQEDVSKLSPLQYDCWWEKVENL 305
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1092 -------KRQVDEAEEEIERLDSLRKKAQRELEEQHEVN---------EQLQARIKSLEK 1135
Cdd:PLN02939 306 qdlldraTNQVEKAALVLDQNQDLRDKVDKLEASLKEANvskfssykvELLQQKLKLLEE 365
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
943-1162 |
7.88e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 40.44 E-value: 7.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 943 RQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRgRDQVDQLRTELmQERSARQDLEcDKISLERQNKDLKTRLASSEgfq 1022
Cdd:TIGR02169 177 EELEEVEENIERLDLIIDEKRQQLERLRREREK-AERYQALLKEK-REYEGYELLK-EKEALERQKEAIERQLASLE--- 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1023 kpsASLSQLESQNQLLQERLQAEERektVLQSTNRKLERRVKELSIQIDDERQHVNDQKDQLTLRVKALKRQVDEAEEEI 1102
Cdd:TIGR02169 251 ---EELEKLTEEISELEKRLEEIEQ---LLEELNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERL 324
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1103 ERLDSLRKKAQRELEEQHEVNEQLQARIKSLEKdawRKASRSAAESALKQEGLSSDEEFD 1162
Cdd:TIGR02169 325 AKLEAEIDKLLAEIEELEREIEEERKRRDKLTE---EYAELKEELEDLRAELEEVDKEFA 381
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
553-884 |
9.48e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 40.11 E-value: 9.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 553 QSMFQK-NKEELRATKQELLQLRMEKEEMEEELGEKMEVLQRdleQARASTRDTHQVEELKKELRRTQGELKELQAEQQN 631
Cdd:pfam17380 290 QEKFEKmEQERLRQEKEEKAREVERRRKLEEAEKARQAEMDR---QAAIYAEQERMAMERERELERIRQEERKRELERIR 366
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 632 QEvtgrhqnqvlekqlaALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAMVLGQRRATVETTLRETQE 711
Cdd:pfam17380 367 QE---------------EIAMEISRMRELERLQMERQQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAEQEE 431
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 712 ENDEFRRRIlgleqqlkearglaeggEAVEARLRDKVHRLEVEKQQLEEALNAAREEEgnlaaAKRALEVRLDEAQRGLA 791
Cdd:pfam17380 432 ARQREVRRL-----------------EEERAREMERVRLEEQERQQQVERLRQQEEER-----KRKKLELEKEKRDRKRA 489
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 792 R------LGQEQQALNRALEEEGKQREALR-----RSKAELEEQKRLLNRTVDRLNKELEQigddsklaLQQLQAQMEDY 860
Cdd:pfam17380 490 EeqrrkiLEKELEERKQAMIEEERKRKLLEkemeeRQKAIYEEERRREAEEERRKQQEMEE--------RRRIQEQMRKA 561
|
330 340
....*....|....*....|....*
gi 1720405137 861 -KEKARKEVADAQRQAKDWASEAEK 884
Cdd:pfam17380 562 tEERSRLEAMEREREMMRQIVESEK 586
|
|
| HAUS5 |
pfam14817 |
HAUS augmin-like complex subunit 5; This family includes HAUS augmin-like complex subunit 5. ... |
823-1135 |
9.55e-03 |
|
HAUS augmin-like complex subunit 5; This family includes HAUS augmin-like complex subunit 5. The HAUS augmin-like complex contributes to mitotic spindle assembly, maintenance of chromosome integrity and completion of cytokinesis.
Pssm-ID: 464332 [Multi-domain] Cd Length: 643 Bit Score: 40.03 E-value: 9.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 823 EQKRLLNRTVDRLNKELEQIGDDSKLALQQLQAQmEDYKEKARKEVADAQR-----QAKDWASEAEKN--SGGLSRLQDE 895
Cdd:pfam14817 77 ARRLELQKEIERLRAEISRLDKQLEARELELSRE-EAERERALDEISDSRHrqlllEAYDQQCEEARKilAEDHQRLQGQ 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 896 LQRLRQALQtsQAERDTARLDKELLAQRLQGLEQEAEN------KKRFQDDKARQLKSLEEKVSRLEAELDEEKNTV--- 966
Cdd:pfam14817 156 LQQLRDAAR--KAEKEVVFGDSKGSKSSVIALEPQVLRdvreacELRAQFLQELLESSLKAYEGSGIHMNRDQRRAViqh 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 967 ---ELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEGFQKPSASLSQLESQNQLLQERLQ 1043
Cdd:pfam14817 234 wlsAVETLLTSHPPSHLLQALEHLAAREKTAIQEETESLDVRADAEALRFRYESNHLLDVSSDESSDLPSVRQLLERQWA 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720405137 1044 AEEREKTVLQSTNRKLERRVKELSIQIDDERQHVNDQKDqlTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQHEVN 1123
Cdd:pfam14817 314 HVQQFLNELAETRSRCQQLQARLQGLKDEAELESLGIGD--TSQNDSLLRQVLELELQAAGLAASRDTLRSECQQLNKLA 391
|
330
....*....|..
gi 1720405137 1124 EQLQARIKSLEK 1135
Cdd:pfam14817 392 RERQEALRSLQK 403
|
|
| |
