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Conserved domains on  [gi|1720391209|ref|XP_030105938|]
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uncharacterized protein LOC73233 isoform X2 [Mus musculus]

Protein Classification

C2H2-type zinc finger protein( domain architecture ID 12142358)

Cys2His2 (C2H2)-type zinc finger protein may be involved in transcriptional regulation

CATH:  3.30.160.60
Gene Ontology:  GO:0008270|GO:0003677
PubMed:  11361095|22803940|11179890|12665246|10940247
SCOP:  4003583

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
199-359 6.81e-08

FOG: Zn-finger [General function prediction only];


:

Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 54.70  E-value: 6.81e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720391209 199 KLYKCSECDKCFTFKSVLRIHQR--IHTGE--KPYKC--SKCEKSFTRKSNLRIHQRIHTGEKPYKC--SECDKCFTFKN 270
Cdd:COG5048   288 LPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCpySLCGKLFSRNDALKRHILLHTSISPAKEklLNSSSKFSPLL 367

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720391209 271 THRIHQRI--HTGEKPYKCSE-----CEKSFTRKSHLRIHQRIHTGEKP--YKCSECDKCFTYEHTLSNHQRIHTGQKPY 341
Cdd:COG5048   368 NNEPPQSLqqYKDLKNDKKSEtlsnsCIRNFKRDSNLSLHIITHLSFRPynCKNPPCSKSFNRHYNLIPHKKIHTNHAPL 447

                         170
                  ....*....|....*...
gi 1720391209 342 KCseCDKCFTRKCNLIIH 359
Cdd:COG5048   448 LC--SILKSFRRDLDLSN 463
SFP1 super family cl25788
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 365-443 1.77e-04

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


The actual alignment was detected with superfamily member COG5189:

Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 43.55  E-value: 1.77e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720391209 365 GEKPYKCS--ECDKCFTHKGGLSIHQithtgekpyKCSECNKCFTHKGDLRRHQRIHSGEKPYKCSECDKCFTRKFSLRS 442
Cdd:COG5189   346 DGKPYKCPveGCNKKYKNQNGLKYHM---------LHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKY 416


                  .
gi 1720391209 443 H 443
Cdd:COG5189   417 H 417
zf-H2C2_2 pfam13465
Zinc-finger double domain;
160-182 9.74e-03

Zinc-finger double domain;


:

Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 33.50  E-value: 9.74e-03
                          10        20
                  ....*....|....*....|...
gi 1720391209 160 LRQHQTIHTGEKPYKCSECDKCF 182
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSF 24
 
Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
199-359 6.81e-08

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 54.70  E-value: 6.81e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720391209 199 KLYKCSECDKCFTFKSVLRIHQR--IHTGE--KPYKC--SKCEKSFTRKSNLRIHQRIHTGEKPYKC--SECDKCFTFKN 270
Cdd:COG5048   288 LPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCpySLCGKLFSRNDALKRHILLHTSISPAKEklLNSSSKFSPLL 367

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720391209 271 THRIHQRI--HTGEKPYKCSE-----CEKSFTRKSHLRIHQRIHTGEKP--YKCSECDKCFTYEHTLSNHQRIHTGQKPY 341
Cdd:COG5048   368 NNEPPQSLqqYKDLKNDKKSEtlsnsCIRNFKRDSNLSLHIITHLSFRPynCKNPPCSKSFNRHYNLIPHKKIHTNHAPL 447

                         170
                  ....*....|....*...
gi 1720391209 342 KCseCDKCFTRKCNLIIH 359
Cdd:COG5048   448 LC--SILKSFRRDLDLSN 463
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 365-443 1.77e-04

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 43.55  E-value: 1.77e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720391209 365 GEKPYKCS--ECDKCFTHKGGLSIHQithtgekpyKCSECNKCFTHKGDLRRHQRIHSGEKPYKCSECDKCFTRKFSLRS 442
Cdd:COG5189   346 DGKPYKCPveGCNKKYKNQNGLKYHM---------LHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKY 416


                  .
gi 1720391209 443 H 443
Cdd:COG5189   417 H 417
zf-H2C2_2 pfam13465
Zinc-finger double domain;
411-436 7.73e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.58  E-value: 7.73e-04
                          10        20
                  ....*....|....*....|....*.
gi 1720391209 411 DLRRHQRIHSGEKPYKCSECDKCFTR 436
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
299-324 1.49e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.81  E-value: 1.49e-03
                          10        20
                  ....*....|....*....|....*.
gi 1720391209 299 HLRIHQRIHTGEKPYKCSECDKCFTY 324
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
160-182 9.74e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 33.50  E-value: 9.74e-03
                          10        20
                  ....*....|....*....|...
gi 1720391209 160 LRQHQTIHTGEKPYKCSECDKCF 182
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSF 24
 
Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
199-359 6.81e-08

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 54.70  E-value: 6.81e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720391209 199 KLYKCSECDKCFTFKSVLRIHQR--IHTGE--KPYKC--SKCEKSFTRKSNLRIHQRIHTGEKPYKC--SECDKCFTFKN 270
Cdd:COG5048   288 LPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCpySLCGKLFSRNDALKRHILLHTSISPAKEklLNSSSKFSPLL 367

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720391209 271 THRIHQRI--HTGEKPYKCSE-----CEKSFTRKSHLRIHQRIHTGEKP--YKCSECDKCFTYEHTLSNHQRIHTGQKPY 341
Cdd:COG5048   368 NNEPPQSLqqYKDLKNDKKSEtlsnsCIRNFKRDSNLSLHIITHLSFRPynCKNPPCSKSFNRHYNLIPHKKIHTNHAPL 447

                         170
                  ....*....|....*...
gi 1720391209 342 KCseCDKCFTRKCNLIIH 359
Cdd:COG5048   448 LC--SILKSFRRDLDLSN 463
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
211-448 3.34e-07

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 52.39  E-value: 3.34e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720391209 211 TFKSVLRIHQRIHTGEKPYKCSKCEKSFTRKSNLRIHQRIHTGEKPYKCSECDKCFTFKNTHRIHQRIHTGEKPYKCSEC 290
Cdd:COG5048   181 SSNLSLLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQSPSSLSSSDSSSSASES 260

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720391209 291 ------EKSFTRKSHLRIHQRIHTG-EKPYKCSECDKCFTYEHTLSNHQR--IHTGQ--KPYKCSE--CDKCFTRKCNLI 357
Cdd:COG5048   261 prsslpTASSQSSSPNESDSSSEKGfSLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPYslCGKLFSRNDALK 340

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720391209 358 IHQKIHTGEKPYKCSEC------DKCFTHKGGLSIHQITHTGEKPYKCSECNKCFTHKGD-----LRRHQRIHSGEKPYK 426
Cdd:COG5048   341 RHILLHTSISPAKEKLLnssskfSPLLNNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRdsnlsLHIITHLSFRPYNCK 420

                         250       260
                  ....*....|....*....|..
gi 1720391209 427 CSECDKCFTRKFSLRSHQRIHT 448
Cdd:COG5048   421 NPPCSKSFNRHYNLIPHKKIHT 442
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
227-376 2.73e-06

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 49.69  E-value: 2.73e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720391209 227 KPYKCSKCEKSFTRKSNLRIHQR--IHTGE--KPYKCSE--CDKCFTFKNTHRIHQRIHTGEKPYKC--SECEKSFTRKS 298
Cdd:COG5048   288 LPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPYslCGKLFSRNDALKRHILLHTSISPAKEklLNSSSKFSPLL 367

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720391209 299 HLRIHQRI--HTGEKPYKCSECD-----KCFTYEHTLSNHQRIHTGQKP--YKCSECDKCFTRKCNLIIHQKIHTGEKPY 369
Cdd:COG5048   368 NNEPPQSLqqYKDLKNDKKSETLsnsciRNFKRDSNLSLHIITHLSFRPynCKNPPCSKSFNRHYNLIPHKKIHTNHAPL 447


                  ....*..
gi 1720391209 370 KCSECDK 376
Cdd:COG5048   448 LCSILKS 454
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
124-448 5.22e-06

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 48.54  E-value: 5.22e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720391209 124 NKVFDSKQILGLKQTNSGKKPYRCSECSRCFTKKCKLRQHQTIHTGEKPYKCS--ECDKCFFYKYSLSIHQRFHTSEKLY 201
Cdd:COG5048    13 NSVLSSTPKSTLKSLSNAPRPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSysGCDKSFSRPLELSRHLRTHHNNPSD 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720391209 202 KCSecDKCFTFKSVLRIHQRIHTGEKPYKCSKCEKSftrKSNLRIHQRIHtgEKPYKCSECDKCFTFKNTHRIHQRIHTG 281
Cdd:COG5048    93 LNS--KSLPLSNSKASSSSLSSSSSNSNDNNLLSSH---SLPPSSRDPQL--PDLLSISNLRNNPLPGNNSSSVNTPQSN 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720391209 282 EKPYKCS--ECEKSFTRKSHLRIHQRIHTGEKPYKCSECDKCFTYEHTLSNHQRIHTGQKPYKCSECDKCFTRKCNLIIH 359
Cdd:COG5048   166 SLHPPLPanSLSKDPSSNLSLLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQSP 245

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720391209 360 QKIHTGEKPYKCSECDKCFTHKGGLSIHQITHTGE-------KPYKCSECNKCFTHKGDLRRHQR--IHSGE--KPYKCS 428
Cdd:COG5048   246 SSLSSSDSSSSASESPRSSLPTASSQSSSPNESDSssekgfsLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCP 325

                         330       340
                  ....*....|....*....|..
gi 1720391209 429 E--CDKCFTRKFSLRSHQRIHT 448
Cdd:COG5048   326 YslCGKLFSRNDALKRHILLHT 347
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
187-443 4.00e-05

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 45.84  E-value: 4.00e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720391209 187 SLSIHQRFHTSEKLYKCSECDKCFTFKSVLRIHQRIHTGEKPYKCSKCEKSFTRKSNLRIHQRIHTGEKPYKCSECDKCF 266
Cdd:COG5048   185 SLLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQSPSSLSSSDSSSSASESPRSS 264

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720391209 267 TFKNTHRIHQRIHTGE-------KPYKCSECEKSFTRKSHLRIHQR--IHTGE--KPYKCSE--CDKCFTYEHTLSNHQR 333
Cdd:COG5048   265 LPTASSQSSSPNESDSssekgfsLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPYslCGKLFSRNDALKRHIL 344

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720391209 334 IHTGQKPYKCSECDKCFTRKCNLII-------HQKIHTGEKPYKC--SECDKCFTHKGGLSIHQITHTGEKP--YKCSEC 402
Cdd:COG5048   345 LHTSISPAKEKLLNSSSKFSPLLNNeppqslqQYKDLKNDKKSETlsNSCIRNFKRDSNLSLHIITHLSFRPynCKNPPC 424

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 1720391209 403 NKCFTHKGDLRRHQRIHSGEKPYKCseCDKCFTRKFSLRSH 443
Cdd:COG5048   425 SKSFNRHYNLIPHKKIHTNHAPLLC--SILKSFRRDLDLSN 463
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 365-443 1.77e-04

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 43.55  E-value: 1.77e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720391209 365 GEKPYKCS--ECDKCFTHKGGLSIHQithtgekpyKCSECNKCFTHKGDLRRHQRIHSGEKPYKCSECDKCFTRKFSLRS 442
Cdd:COG5189   346 DGKPYKCPveGCNKKYKNQNGLKYHM---------LHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKY 416


                  .
gi 1720391209 443 H 443
Cdd:COG5189   417 H 417
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 309-392 3.26e-04

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 42.78  E-value: 3.26e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720391209 309 GEKPYKCS--ECDKCFTYEHTLSNHqRIHTGQKPYKCSECDKcftrkcnlIIHQKIHTGEKPYKCSECDKCFTHKGGLSI 386
Cdd:COG5189   346 DGKPYKCPveGCNKKYKNQNGLKYH-MLHGHQNQKLHENPSP--------EKMNIFSAKDKPYRCEVCDKRYKNLNGLKY 416


                  ....*.
gi 1720391209 387 HqITHT 392
Cdd:COG5189   417 H-RKHS 421
zf-H2C2_2 pfam13465
Zinc-finger double domain;
411-436 7.73e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.58  E-value: 7.73e-04
                          10        20
                  ....*....|....*....|....*.
gi 1720391209 411 DLRRHQRIHSGEKPYKCSECDKCFTR 436
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
299-324 1.49e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.81  E-value: 1.49e-03
                          10        20
                  ....*....|....*....|....*.
gi 1720391209 299 HLRIHQRIHTGEKPYKCSECDKCFTY 324
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
243-267 2.00e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.42  E-value: 2.00e-03
                          10        20
                  ....*....|....*....|....*
gi 1720391209 243 NLRIHQRIHTGEKPYKCSECDKCFT 267
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFK 25
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 225-303 4.03e-03

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 39.32  E-value: 4.03e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720391209 225 GEKPYKCS--KCEKSFTRKSNLRIHqRIHtgekpykcSECDKCFTFKNTHRIHQRIHTGEKPYKCSECEKSFTRKSHLRI 302
Cdd:COG5189   346 DGKPYKCPveGCNKKYKNQNGLKYH-MLH--------GHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKY 416


                  .
gi 1720391209 303 H 303
Cdd:COG5189   417 H 417
zf-H2C2_2 pfam13465
Zinc-finger double domain;
216-240 4.35e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 34.65  E-value: 4.35e-03
                          10        20
                  ....*....|....*....|....*
gi 1720391209 216 LRIHQRIHTGEKPYKCSKCEKSFTR 240
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
328-352 6.71e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 33.88  E-value: 6.71e-03
                          10        20
                  ....*....|....*....|....*
gi 1720391209 328 LSNHQRIHTGQKPYKCSECDKCFTR 352
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
355-380 7.18e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 33.88  E-value: 7.18e-03
                          10        20
                  ....*....|....*....|....*.
gi 1720391209 355 NLIIHQKIHTGEKPYKCSECDKCFTH 380
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 169-247 8.77e-03

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 38.16  E-value: 8.77e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720391209 169 GEKPYKCS--ECDKCFFYKYSLSIHQRF-HTSEKLYKCSECDKcftfksvlriHQRIHTGEKPYKCSKCEKSFTRKSNLR 245
Cdd:COG5189   346 DGKPYKCPveGCNKKYKNQNGLKYHMLHgHQNQKLHENPSPEK----------MNIFSAKDKPYRCEVCDKRYKNLNGLK 415


                  ..
gi 1720391209 246 IH 247
Cdd:COG5189   416 YH 417
zf-H2C2_2 pfam13465
Zinc-finger double domain;
160-182 9.74e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 33.50  E-value: 9.74e-03
                          10        20
                  ....*....|....*....|...
gi 1720391209 160 LRQHQTIHTGEKPYKCSECDKCF 182
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSF 24
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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