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Conserved domains on  [gi|1720357297|ref|XP_030099043|]
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mitochondrial protein C2orf69 homolog isoform X1 [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
C2orf69 super family cl11190
C2orf69; This family includes C2orf69 from human, previously known as UPF0565, which is an ...
 55-95 5.80e-07

C2orf69; This family includes C2orf69 from human, previously known as UPF0565, which is an important regulator of human mitochondrial function and may also influence other metabolic pathways.


The actual alignment was detected with superfamily member pfam10561:

Pssm-ID: 463147  Cd Length: 296  Bit Score: 45.85  E-value: 5.80e-07
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....
gi 1720357297  55 TVPGSDpQRSNELLLL---TSREGDSPEQRHHVLYFPGDVQTIP 95
Cdd:pfam10561   4 SVPGYE-NRANDILYRppiLRQQSQESYDQKHVIFFPGDVQNFF 46
 
Name Accession Description Interval E-value
C2orf69 pfam10561
C2orf69; This family includes C2orf69 from human, previously known as UPF0565, which is an ...
 55-95 5.80e-07

C2orf69; This family includes C2orf69 from human, previously known as UPF0565, which is an important regulator of human mitochondrial function and may also influence other metabolic pathways.


Pssm-ID: 463147  Cd Length: 296  Bit Score: 45.85  E-value: 5.80e-07
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....
gi 1720357297  55 TVPGSDpQRSNELLLL---TSREGDSPEQRHHVLYFPGDVQTIP 95
Cdd:pfam10561   4 SVPGYE-NRANDILYRppiLRQQSQESYDQKHVIFFPGDVQNFF 46
 
Name Accession Description Interval E-value
C2orf69 pfam10561
C2orf69; This family includes C2orf69 from human, previously known as UPF0565, which is an ...
 55-95 5.80e-07

C2orf69; This family includes C2orf69 from human, previously known as UPF0565, which is an important regulator of human mitochondrial function and may also influence other metabolic pathways.


Pssm-ID: 463147  Cd Length: 296  Bit Score: 45.85  E-value: 5.80e-07
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....
gi 1720357297  55 TVPGSDpQRSNELLLL---TSREGDSPEQRHHVLYFPGDVQTIP 95
Cdd:pfam10561   4 SVPGYE-NRANDILYRppiLRQQSQESYDQKHVIFFPGDVQNFF 46
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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