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Conserved domains on  [gi|1717019473|ref|XP_030061760|]
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complement factor H isoform X4 [Microcaecilia unicolor]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PHA02927 super family cl33700
secreted complement-binding protein; Provisional
25-268 2.05e-26

secreted complement-binding protein; Provisional


The actual alignment was detected with superfamily member PHA02927:

Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 110.13  E-value: 2.05e-26
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473   25 PDSIPIAELVGEWDKESYPHGTEATYLCRPGY--IKVGRILWKCLNGEWKEVNpmvKCRNKPCGHPGDLLYGSFDLTrGT 102
Cdd:PHA02927    27 PINMKFKNSVETDANANYNIGDTIEYLCLPGYrkQKMGPIYAKCTGTGWTLFN---QCIKRRCPSPRDIDNGQLDIG-GV 102
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  103 DFvfGSRVEYQCDDGYQMISRV-NYRECTATG---WNNYVPQCEVRKCLPVQPPQNGRIvmtsiSDVDEEYPYGYILLFE 178
Cdd:PHA02927   103 DF--GSSITYSCNSGYQLIGESkSYCELGSTGsmvWNPEAPICESVKCQSPPSISNGRH-----NGYEDFYTDGSVVTYS 175
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  179 CDSpNYKLSGPNELYCmKSGEWSaDVPACEVISCQEPSIPNGKMMSRLPRkmQYENKERIQYECDPGYKHESRGYSECI- 257
Cdd:PHA02927   176 CNS-GYSLIGNSGVLC-SGGEWS-DPPTCQIVKCPHPTISNGYLSSGFKR--SYSYNDNVDFKCKYGYKLSGSSSSTCSp 250
                          250
                   ....*....|..
gi 1717019473  258 ENGWNPA-PSCI 268
Cdd:PHA02927   251 GNTWQPElPKCV 262
PHA02927 super family cl33700
secreted complement-binding protein; Provisional
685-910 2.54e-25

secreted complement-binding protein; Provisional


The actual alignment was detected with superfamily member PHA02927:

Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 106.66  E-value: 2.54e-25
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  685 NAETVPSKDYYNGDTVKYICNENCQLQ--GKEEIECKNEKWTSPPRCIKstEKCPYPPELHNTVEQNLKDHFNENDTvhF 762
Cdd:PHA02927    35 SVETDANANYNIGDTIEYLCLPGYRKQkmGPIYAKCTGTGWTLFNQCIK--RRCPSPRDIDNGQLDIGGVDFGSSIT--Y 110
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  763 KCHETFILHGSESIQCRKGS-----WTSPPQCIETQVCKQPPTINNGKAaTPLKPSYSDGDIVIYNCDSGYQAEESNEIT 837
Cdd:PHA02927   111 SCNSGYQLIGESKSYCELGStgsmvWNPEAPICESVKCQSPPSISNGRH-NGYEDFYTDGSVVTYSCNSGYSLIGNSGVL 189
                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1717019473  838 CTGGKWSTPPQCKeaLATCDKPPfISNGAIQGSELRKYKAGQSVTYRCINYYVMDGSPTVTCLQGRWSQP--PTC 910
Cdd:PHA02927   190 CSGGEWSDPPTCQ--IVKCPHPT-ISNGYLSSGFKRSYSYNDNVDFKCKYGYKLSGSSSSTCSPGNTWQPelPKC 261
PHA02927 super family cl33700
secreted complement-binding protein; Provisional
808-1038 2.83e-17

secreted complement-binding protein; Provisional


The actual alignment was detected with superfamily member PHA02927:

Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 83.16  E-value: 2.83e-17
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  808 TPLKPSYSDGDIVIYNCDSGYQAEESNEI--TCTGGKWSTPPQCKEAlaTCDKPPFISNGAIqgsELRKYKAGQSVTYRC 885
Cdd:PHA02927    38 TDANANYNIGDTIEYLCLPGYRKQKMGPIyaKCTGTGWTLFNQCIKR--RCPSPRDIDNGQL---DIGGVDFGSSITYSC 112
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  886 INYYVMDGSPTVTCLQGR-----WS-QPPTCFEAlaTCDQPPSISNGAIQGSElRKYKAGQSVTYRCINYYVMDGSPTVT 959
Cdd:PHA02927   113 NSGYQLIGESKSYCELGStgsmvWNpEAPICESV--KCQSPPSISNGRHNGYE-DFYTDGSVVTYSCNSGYSLIGNSGVL 189
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  960 CLQGRWSQPPTC-FEPC---TASDEEMKTNNiqlrwlddeKLYVQHGHRVEFTCKYNYVVLPPSQEfrlTCIRGHL---D 1032
Cdd:PHA02927   190 CSGGEWSDPPTCqIVKCphpTISNGYLSSGF---------KRSYSYNDNVDFKCKYGYKLSGSSSS---TCSPGNTwqpE 257

                   ....*.
gi 1717019473 1033 YPKCIK 1038
Cdd:PHA02927   258 LPKCVR 263
PHA02927 super family cl33700
secreted complement-binding protein; Provisional
405-629 3.29e-16

secreted complement-binding protein; Provisional


The actual alignment was detected with superfamily member PHA02927:

Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 80.08  E-value: 3.29e-16
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  405 NGYPESSAARYQVGDKGRYSCYQGYSTpEGMSSGEIECLKNGWSVQPTCIK-ICTKPV-LHHGHYSDKPVFMaGDILQYE 482
Cdd:PHA02927    34 NSVETDANANYNIGDTIEYLCLPGYRK-QKMGPIYAKCTGTGWTLFNQCIKrRCPSPRdIDNGQLDIGGVDF-GSSITYS 111
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  483 CDEGYMTsdrnIIERLKCTESGWT-------KTPECIAITCSVDDEIPNGVSTPQKEEYENGHVLKFSCNENYKIKGEEL 555
Cdd:PHA02927   112 CNSGYQL----IGESKSYCELGSTgsmvwnpEAPICESVKCQSPPSISNGRHNGYEDFYTDGSVVTYSCNSGYSLIGNSG 187
                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1717019473  556 RQCYYFGWfpKTLPQCIEITCKRPS-RKGALLSPHLQIYKHLDTVNISCEDGYKINGSDLIQCYSFG-WYPKPPTC 629
Cdd:PHA02927   188 VLCSGGEW--SDPPTCQIVKCPHPTiSNGYLSSGFKRSYSYNDNVDFKCKYGYKLSGSSSSTCSPGNtWQPELPKC 261
PHA02927 super family cl33700
secreted complement-binding protein; Provisional
1066-1210 5.08e-10

secreted complement-binding protein; Provisional


The actual alignment was detected with superfamily member PHA02927:

Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 61.59  E-value: 5.08e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473 1066 GSFITFKCKTGFSPVPRQNMKMKCHDT-RLTYPKCTSSTPSKSCGPPLAIENGGISGTSiSDYVHGSSVEYRCARYYKLK 1144
Cdd:PHA02927   105 GSSITYSCNSGYQLIGESKSYCELGSTgSMVWNPEAPICESVKCQSPPSISNGRHNGYE-DFYTDGSVVTYSCNSGYSLI 183
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1717019473 1145 DPKPVVCNDGEWSNPPECvepctlnedQIFK------NNIVLSRQHRNEmfYTHMGFVEFECKYGYRFQGTS 1210
Cdd:PHA02927   184 GNSGVLCSGGEWSDPPTC---------QIVKcphptiSNGYLSSGFKRS--YSYNDNVDFKCKYGYKLSGSS 244
PHA02639 super family cl31493
EEV host range protein; Provisional
212-395 3.30e-06

EEV host range protein; Provisional


The actual alignment was detected with superfamily member PHA02639:

Pssm-ID: 165022 [Multi-domain]  Cd Length: 295  Bit Score: 50.43  E-value: 3.30e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  212 CQEPSIPNGKMMSRLPRKmqYENKERIQYECDPGYKHESRGYSECIENG----W-NPAPSCIEIVCSFQ-NVVNGNLQPE 285
Cdd:PHA02639    22 CDKPDDISNGFITELMEK--YEIGKLIEYTCNTDYALIGDRFRTCIKDKnnaiWsNKAPFCMLKECNDPpSIINGKIYNK 99
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  286 KNVYRENERVNLICNKGYQPEYK---DEFPKCTK-TGWS-SPLLCVHKDCSFPEIENGRLlqTQYSTYKNYYFPMRKGrk 360
Cdd:PHA02639   100 REMYKVGDEIYYVCNEHKGVQYSlvgNEKITCIQdKSWKpDPPICKMINCRFPALQNGYI--NGIPSNKKFYYKTRVG-- 175
                          170       180       190
                   ....*....|....*....|....*....|....*..
gi 1717019473  361 idYICTEGF-FTEEGNSWGGIECTdegWSP-VPKCIK 395
Cdd:PHA02639   176 --FSCKSGFdLVGEKYSTCNINAT---WFPsIPTCVR 207
 
Name Accession Description Interval E-value
PHA02927 PHA02927
secreted complement-binding protein; Provisional
25-268 2.05e-26

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 110.13  E-value: 2.05e-26
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473   25 PDSIPIAELVGEWDKESYPHGTEATYLCRPGY--IKVGRILWKCLNGEWKEVNpmvKCRNKPCGHPGDLLYGSFDLTrGT 102
Cdd:PHA02927    27 PINMKFKNSVETDANANYNIGDTIEYLCLPGYrkQKMGPIYAKCTGTGWTLFN---QCIKRRCPSPRDIDNGQLDIG-GV 102
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  103 DFvfGSRVEYQCDDGYQMISRV-NYRECTATG---WNNYVPQCEVRKCLPVQPPQNGRIvmtsiSDVDEEYPYGYILLFE 178
Cdd:PHA02927   103 DF--GSSITYSCNSGYQLIGESkSYCELGSTGsmvWNPEAPICESVKCQSPPSISNGRH-----NGYEDFYTDGSVVTYS 175
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  179 CDSpNYKLSGPNELYCmKSGEWSaDVPACEVISCQEPSIPNGKMMSRLPRkmQYENKERIQYECDPGYKHESRGYSECI- 257
Cdd:PHA02927   176 CNS-GYSLIGNSGVLC-SGGEWS-DPPTCQIVKCPHPTISNGYLSSGFKR--SYSYNDNVDFKCKYGYKLSGSSSSTCSp 250
                          250
                   ....*....|..
gi 1717019473  258 ENGWNPA-PSCI 268
Cdd:PHA02927   251 GNTWQPElPKCV 262
PHA02927 PHA02927
secreted complement-binding protein; Provisional
685-910 2.54e-25

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 106.66  E-value: 2.54e-25
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  685 NAETVPSKDYYNGDTVKYICNENCQLQ--GKEEIECKNEKWTSPPRCIKstEKCPYPPELHNTVEQNLKDHFNENDTvhF 762
Cdd:PHA02927    35 SVETDANANYNIGDTIEYLCLPGYRKQkmGPIYAKCTGTGWTLFNQCIK--RRCPSPRDIDNGQLDIGGVDFGSSIT--Y 110
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  763 KCHETFILHGSESIQCRKGS-----WTSPPQCIETQVCKQPPTINNGKAaTPLKPSYSDGDIVIYNCDSGYQAEESNEIT 837
Cdd:PHA02927   111 SCNSGYQLIGESKSYCELGStgsmvWNPEAPICESVKCQSPPSISNGRH-NGYEDFYTDGSVVTYSCNSGYSLIGNSGVL 189
                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1717019473  838 CTGGKWSTPPQCKeaLATCDKPPfISNGAIQGSELRKYKAGQSVTYRCINYYVMDGSPTVTCLQGRWSQP--PTC 910
Cdd:PHA02927   190 CSGGEWSDPPTCQ--IVKCPHPT-ISNGYLSSGFKRSYSYNDNVDFKCKYGYKLSGSSSSTCSPGNTWQPelPKC 261
PHA02927 PHA02927
secreted complement-binding protein; Provisional
808-1038 2.83e-17

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 83.16  E-value: 2.83e-17
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  808 TPLKPSYSDGDIVIYNCDSGYQAEESNEI--TCTGGKWSTPPQCKEAlaTCDKPPFISNGAIqgsELRKYKAGQSVTYRC 885
Cdd:PHA02927    38 TDANANYNIGDTIEYLCLPGYRKQKMGPIyaKCTGTGWTLFNQCIKR--RCPSPRDIDNGQL---DIGGVDFGSSITYSC 112
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  886 INYYVMDGSPTVTCLQGR-----WS-QPPTCFEAlaTCDQPPSISNGAIQGSElRKYKAGQSVTYRCINYYVMDGSPTVT 959
Cdd:PHA02927   113 NSGYQLIGESKSYCELGStgsmvWNpEAPICESV--KCQSPPSISNGRHNGYE-DFYTDGSVVTYSCNSGYSLIGNSGVL 189
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  960 CLQGRWSQPPTC-FEPC---TASDEEMKTNNiqlrwlddeKLYVQHGHRVEFTCKYNYVVLPPSQEfrlTCIRGHL---D 1032
Cdd:PHA02927   190 CSGGEWSDPPTCqIVKCphpTISNGYLSSGF---------KRSYSYNDNVDFKCKYGYKLSGSSSS---TCSPGNTwqpE 257

                   ....*.
gi 1717019473 1033 YPKCIK 1038
Cdd:PHA02927   258 LPKCVR 263
PHA02927 PHA02927
secreted complement-binding protein; Provisional
405-629 3.29e-16

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 80.08  E-value: 3.29e-16
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  405 NGYPESSAARYQVGDKGRYSCYQGYSTpEGMSSGEIECLKNGWSVQPTCIK-ICTKPV-LHHGHYSDKPVFMaGDILQYE 482
Cdd:PHA02927    34 NSVETDANANYNIGDTIEYLCLPGYRK-QKMGPIYAKCTGTGWTLFNQCIKrRCPSPRdIDNGQLDIGGVDF-GSSITYS 111
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  483 CDEGYMTsdrnIIERLKCTESGWT-------KTPECIAITCSVDDEIPNGVSTPQKEEYENGHVLKFSCNENYKIKGEEL 555
Cdd:PHA02927   112 CNSGYQL----IGESKSYCELGSTgsmvwnpEAPICESVKCQSPPSISNGRHNGYEDFYTDGSVVTYSCNSGYSLIGNSG 187
                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1717019473  556 RQCYYFGWfpKTLPQCIEITCKRPS-RKGALLSPHLQIYKHLDTVNISCEDGYKINGSDLIQCYSFG-WYPKPPTC 629
Cdd:PHA02927   188 VLCSGGEW--SDPPTCQIVKCPHPTiSNGYLSSGFKRSYSYNDNVDFKCKYGYKLSGSSSSTCSPGNtWQPELPKC 261
PHA02927 PHA02927
secreted complement-binding protein; Provisional
1066-1210 5.08e-10

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 61.59  E-value: 5.08e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473 1066 GSFITFKCKTGFSPVPRQNMKMKCHDT-RLTYPKCTSSTPSKSCGPPLAIENGGISGTSiSDYVHGSSVEYRCARYYKLK 1144
Cdd:PHA02927   105 GSSITYSCNSGYQLIGESKSYCELGSTgSMVWNPEAPICESVKCQSPPSISNGRHNGYE-DFYTDGSVVTYSCNSGYSLI 183
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1717019473 1145 DPKPVVCNDGEWSNPPECvepctlnedQIFK------NNIVLSRQHRNEmfYTHMGFVEFECKYGYRFQGTS 1210
Cdd:PHA02927   184 GNSGVLCSGGEWSDPPTC---------QIVKcphptiSNGYLSSGFKRS--YSYNDNVDFKCKYGYKLSGSS 244
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
917-971 3.47e-09

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 54.01  E-value: 3.47e-09
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 1717019473  917 CDQPPSISNGAIQGSeLRKYKAGQSVTYRCINYYVMDGSPTVTCL-QGRWSQ-PPTC 971
Cdd:cd00033      1 CPPPPVPENGTVTGS-KGSYSYGSTVTYSCNEGYTLVGSSTITCTeNGGWSPpPPTC 56
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
856-910 5.18e-09

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 53.24  E-value: 5.18e-09
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 1717019473  856 CDKPPFISNGAIQGSeLRKYKAGQSVTYRCINYYVMDGSPTVTCL-QGRWSQ-PPTC 910
Cdd:cd00033      1 CPPPPVPENGTVTGS-KGSYSYGSTVTYSCNEGYTLVGSSTITCTeNGGWSPpPPTC 56
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
795-849 3.45e-08

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 50.99  E-value: 3.45e-08
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|....*..
gi 1717019473   795 CKQPPTINNGKAaTPLKPSYSDGDIVIYNCDSGYQAEESNEITCT-GGKWS-TPPQC 849
Cdd:smart00032    1 CPPPPDIENGTV-TSSSGTYSYGDTVTYSCDPGYTLIGSSTITCLeNGTWSpPPPTC 56
Sushi pfam00084
Sushi repeat (SCR repeat);
795-849 8.42e-08

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 49.81  E-value: 8.42e-08
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 1717019473  795 CKQPPTINNGKAaTPLKPSYSDGDIVIYNCDSGYQAEESNEITCTG-GKWS-TPPQC 849
Cdd:pfam00084    1 CPPPPDIPNGKV-SATKNEYNYGASVSYECDPGYRLVGSPTITCQEdGTWSpPFPEC 56
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
146-208 1.12e-07

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 49.77  E-value: 1.12e-07
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1717019473  146 CLPVQPPQNGRIVMTSisdvdEEYPYGYILLFECDsPNYKLSGPNELYCMKSGEWSADVPACE 208
Cdd:cd00033      1 CPPPPVPENGTVTGSK-----GSYSYGSTVTYSCN-EGYTLVGSSTITCTENGGWSPPPPTCE 57
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
917-971 1.96e-07

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 49.06  E-value: 1.96e-07
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|....*..
gi 1717019473   917 CDQPPSISNGAIQGSElRKYKAGQSVTYRCINYYVMDGSPTVTCL-QGRWS-QPPTC 971
Cdd:smart00032    1 CPPPPDIENGTVTSSS-GTYSYGDTVTYSCDPGYTLIGSSTITCLeNGTWSpPPPTC 56
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
1108-1163 2.48e-07

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 48.61  E-value: 2.48e-07
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 1717019473 1108 CGPPLAIENGGISGTSiSDYVHGSSVEYRCARYYKLKDPKPVVCN-DGEWSN-PPECV 1163
Cdd:cd00033      1 CPPPPVPENGTVTGSK-GSYSYGSTVTYSCNEGYTLVGSSTITCTeNGGWSPpPPTCE 57
Sushi pfam00084
Sushi repeat (SCR repeat);
917-971 7.14e-07

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 47.11  E-value: 7.14e-07
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 1717019473  917 CDQPPSISNGAIQGSELRkYKAGQSVTYRCINYYVMDGSPTVTCLQ-GRWSQP-PTC 971
Cdd:pfam00084    1 CPPPPDIPNGKVSATKNE-YNYGASVSYECDPGYRLVGSPTITCQEdGTWSPPfPEC 56
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
85-141 8.36e-07

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 47.14  E-value: 8.36e-07
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|....*...
gi 1717019473    85 CGHPGDLLYGSFDLTRGTdFVFGSRVEYQCDDGYQMISRvNYRECTATG-WNNYVPQC 141
Cdd:smart00032    1 CPPPPDIENGTVTSSSGT-YSYGDTVTYSCDPGYTLIGS-STITCLENGtWSPPPPTC 56
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
1108-1162 1.64e-06

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 46.37  E-value: 1.64e-06
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|....*..
gi 1717019473  1108 CGPPLAIENGGISGTSiSDYVHGSSVEYRCARYYKLKDPKPVVC-NDGEWSNP-PEC 1162
Cdd:smart00032    1 CPPPPDIENGTVTSSS-GTYSYGDTVTYSCDPGYTLIGSSTITClENGTWSPPpPTC 56
Sushi pfam00084
Sushi repeat (SCR repeat);
85-141 2.18e-06

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 45.95  E-value: 2.18e-06
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 1717019473   85 CGHPGDLLYGSFDLTRGtDFVFGSRVEYQCDDGYQMISRvNYRECTATG-WNNYVPQC 141
Cdd:pfam00084    1 CPPPPDIPNGKVSATKN-EYNYGASVSYECDPGYRLVGS-PTITCQEDGtWSPPFPEC 56
PHA02639 PHA02639
EEV host range protein; Provisional
212-395 3.30e-06

EEV host range protein; Provisional


Pssm-ID: 165022 [Multi-domain]  Cd Length: 295  Bit Score: 50.43  E-value: 3.30e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  212 CQEPSIPNGKMMSRLPRKmqYENKERIQYECDPGYKHESRGYSECIENG----W-NPAPSCIEIVCSFQ-NVVNGNLQPE 285
Cdd:PHA02639    22 CDKPDDISNGFITELMEK--YEIGKLIEYTCNTDYALIGDRFRTCIKDKnnaiWsNKAPFCMLKECNDPpSIINGKIYNK 99
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  286 KNVYRENERVNLICNKGYQPEYK---DEFPKCTK-TGWS-SPLLCVHKDCSFPEIENGRLlqTQYSTYKNYYFPMRKGrk 360
Cdd:PHA02639   100 REMYKVGDEIYYVCNEHKGVQYSlvgNEKITCIQdKSWKpDPPICKMINCRFPALQNGYI--NGIPSNKKFYYKTRVG-- 175
                          170       180       190
                   ....*....|....*....|....*....|....*..
gi 1717019473  361 idYICTEGF-FTEEGNSWGGIECTdegWSP-VPKCIK 395
Cdd:PHA02639   176 --FSCKSGFdLVGEKYSTCNINAT---WFPsIPTCVR 207
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
516-571 2.89e-05

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 42.90  E-value: 2.89e-05
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|....*.
gi 1717019473   516 CSVDDEIPNGVSTPQKEEYENGHVLKFSCNENYKIKGEELRQCYYFGWFPKTLPQC 571
Cdd:smart00032    1 CPPPPDIENGTVTSSSGTYSYGDTVTYSCDPGYTLIGSSTITCLENGTWSPPPPTC 56
Sushi pfam00084
Sushi repeat (SCR repeat);
1108-1162 3.48e-05

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 42.49  E-value: 3.48e-05
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 1717019473 1108 CGPPLAIENGGISGTSiSDYVHGSSVEYRCARYYKLKDPKPVVC-NDGEWSNP-PEC 1162
Cdd:pfam00084    1 CPPPPDIPNGKVSATK-NEYNYGASVSYECDPGYRLVGSPTITCqEDGTWSPPfPEC 56
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
579-630 1.15e-04

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 40.91  E-value: 1.15e-04
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|...
gi 1717019473  579 PSRKGALLSPHLQIYKHLDTVNISCEDGYKINGSDLIQCYSFG-WYPKPPTCQ 630
Cdd:cd00033      5 PVPENGTVTGSKGSYSYGSTVTYSCNEGYTLVGSSTITCTENGgWSPPPPTCE 57
Sushi pfam00084
Sushi repeat (SCR repeat);
516-571 8.34e-04

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 38.63  E-value: 8.34e-04
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1717019473  516 CSVDDEIPNGVSTPQKEEYENGHVLKFSCNENYKIKGEELRQCYYFGWFPKTLPQC 571
Cdd:pfam00084    1 CPPPPDIPNGKVSATKNEYNYGASVSYECDPGYRLVGSPTITCQEDGTWSPPFPEC 56
 
Name Accession Description Interval E-value
PHA02927 PHA02927
secreted complement-binding protein; Provisional
25-268 2.05e-26

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 110.13  E-value: 2.05e-26
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473   25 PDSIPIAELVGEWDKESYPHGTEATYLCRPGY--IKVGRILWKCLNGEWKEVNpmvKCRNKPCGHPGDLLYGSFDLTrGT 102
Cdd:PHA02927    27 PINMKFKNSVETDANANYNIGDTIEYLCLPGYrkQKMGPIYAKCTGTGWTLFN---QCIKRRCPSPRDIDNGQLDIG-GV 102
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  103 DFvfGSRVEYQCDDGYQMISRV-NYRECTATG---WNNYVPQCEVRKCLPVQPPQNGRIvmtsiSDVDEEYPYGYILLFE 178
Cdd:PHA02927   103 DF--GSSITYSCNSGYQLIGESkSYCELGSTGsmvWNPEAPICESVKCQSPPSISNGRH-----NGYEDFYTDGSVVTYS 175
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  179 CDSpNYKLSGPNELYCmKSGEWSaDVPACEVISCQEPSIPNGKMMSRLPRkmQYENKERIQYECDPGYKHESRGYSECI- 257
Cdd:PHA02927   176 CNS-GYSLIGNSGVLC-SGGEWS-DPPTCQIVKCPHPTISNGYLSSGFKR--SYSYNDNVDFKCKYGYKLSGSSSSTCSp 250
                          250
                   ....*....|..
gi 1717019473  258 ENGWNPA-PSCI 268
Cdd:PHA02927   251 GNTWQPElPKCV 262
PHA02927 PHA02927
secreted complement-binding protein; Provisional
685-910 2.54e-25

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 106.66  E-value: 2.54e-25
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  685 NAETVPSKDYYNGDTVKYICNENCQLQ--GKEEIECKNEKWTSPPRCIKstEKCPYPPELHNTVEQNLKDHFNENDTvhF 762
Cdd:PHA02927    35 SVETDANANYNIGDTIEYLCLPGYRKQkmGPIYAKCTGTGWTLFNQCIK--RRCPSPRDIDNGQLDIGGVDFGSSIT--Y 110
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  763 KCHETFILHGSESIQCRKGS-----WTSPPQCIETQVCKQPPTINNGKAaTPLKPSYSDGDIVIYNCDSGYQAEESNEIT 837
Cdd:PHA02927   111 SCNSGYQLIGESKSYCELGStgsmvWNPEAPICESVKCQSPPSISNGRH-NGYEDFYTDGSVVTYSCNSGYSLIGNSGVL 189
                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1717019473  838 CTGGKWSTPPQCKeaLATCDKPPfISNGAIQGSELRKYKAGQSVTYRCINYYVMDGSPTVTCLQGRWSQP--PTC 910
Cdd:PHA02927   190 CSGGEWSDPPTCQ--IVKCPHPT-ISNGYLSSGFKRSYSYNDNVDFKCKYGYKLSGSSSSTCSPGNTWQPelPKC 261
PHA02927 PHA02927
secreted complement-binding protein; Provisional
729-971 1.67e-23

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 101.65  E-value: 1.67e-23
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  729 CIKSTEKCPYPP---ELHNTVEQNLKDHFNENDTVHFKCHETFILH--GSESIQCRKGSWTSPPQCIETQvCKQPPTINN 803
Cdd:PHA02927    16 CVLSCCTIPSRPinmKFKNSVETDANANYNIGDTIEYLCLPGYRKQkmGPIYAKCTGTGWTLFNQCIKRR-CPSPRDIDN 94
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  804 GKaatpLKPSYSD-GDIVIYNCDSGYQ----AEESNEITCTGGKWSTP--PQCKEAlaTCDKPPFISNGAIQGSElRKYK 876
Cdd:PHA02927    95 GQ----LDIGGVDfGSSITYSCNSGYQligeSKSYCELGSTGSMVWNPeaPICESV--KCQSPPSISNGRHNGYE-DFYT 167
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  877 AGQSVTYRCINYYVMDGSPTVTCLQGRWSQPPTCfeALATCDQPpSISNGAIQGSELRKYKAGQSVTYRCINYYVMDGSP 956
Cdd:PHA02927   168 DGSVVTYSCNSGYSLIGNSGVLCSGGEWSDPPTC--QIVKCPHP-TISNGYLSSGFKRSYSYNDNVDFKCKYGYKLSGSS 244
                          250
                   ....*....|....*..
gi 1717019473  957 TVTCLQGRWSQP--PTC 971
Cdd:PHA02927   245 SSTCSPGNTWQPelPKC 261
PHA02927 PHA02927
secreted complement-binding protein; Provisional
808-1038 2.83e-17

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 83.16  E-value: 2.83e-17
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  808 TPLKPSYSDGDIVIYNCDSGYQAEESNEI--TCTGGKWSTPPQCKEAlaTCDKPPFISNGAIqgsELRKYKAGQSVTYRC 885
Cdd:PHA02927    38 TDANANYNIGDTIEYLCLPGYRKQKMGPIyaKCTGTGWTLFNQCIKR--RCPSPRDIDNGQL---DIGGVDFGSSITYSC 112
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  886 INYYVMDGSPTVTCLQGR-----WS-QPPTCFEAlaTCDQPPSISNGAIQGSElRKYKAGQSVTYRCINYYVMDGSPTVT 959
Cdd:PHA02927   113 NSGYQLIGESKSYCELGStgsmvWNpEAPICESV--KCQSPPSISNGRHNGYE-DFYTDGSVVTYSCNSGYSLIGNSGVL 189
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  960 CLQGRWSQPPTC-FEPC---TASDEEMKTNNiqlrwlddeKLYVQHGHRVEFTCKYNYVVLPPSQEfrlTCIRGHL---D 1032
Cdd:PHA02927   190 CSGGEWSDPPTCqIVKCphpTISNGYLSSGF---------KRSYSYNDNVDFKCKYGYKLSGSSSS---TCSPGNTwqpE 257

                   ....*.
gi 1717019473 1033 YPKCIK 1038
Cdd:PHA02927   258 LPKCVR 263
PHA02927 PHA02927
secreted complement-binding protein; Provisional
405-629 3.29e-16

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 80.08  E-value: 3.29e-16
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  405 NGYPESSAARYQVGDKGRYSCYQGYSTpEGMSSGEIECLKNGWSVQPTCIK-ICTKPV-LHHGHYSDKPVFMaGDILQYE 482
Cdd:PHA02927    34 NSVETDANANYNIGDTIEYLCLPGYRK-QKMGPIYAKCTGTGWTLFNQCIKrRCPSPRdIDNGQLDIGGVDF-GSSITYS 111
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  483 CDEGYMTsdrnIIERLKCTESGWT-------KTPECIAITCSVDDEIPNGVSTPQKEEYENGHVLKFSCNENYKIKGEEL 555
Cdd:PHA02927   112 CNSGYQL----IGESKSYCELGSTgsmvwnpEAPICESVKCQSPPSISNGRHNGYEDFYTDGSVVTYSCNSGYSLIGNSG 187
                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1717019473  556 RQCYYFGWfpKTLPQCIEITCKRPS-RKGALLSPHLQIYKHLDTVNISCEDGYKINGSDLIQCYSFG-WYPKPPTC 629
Cdd:PHA02927   188 VLCSGGEW--SDPPTCQIVKCPHPTiSNGYLSSGFKRSYSYNDNVDFKCKYGYKLSGSSSSTCSPGNtWQPELPKC 261
PHA02954 PHA02954
EEV membrane glycoprotein; Provisional
670-905 1.61e-14

EEV membrane glycoprotein; Provisional


Pssm-ID: 165263 [Multi-domain]  Cd Length: 317  Bit Score: 75.89  E-value: 1.61e-14
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  670 LSGLVKKCPPAPQLENAETVPSKDYYNG-DTVKYICNENCQLQGKEEIeCKNEKWTSPPRCIKSTEKCPYPPELHNTVEQ 748
Cdd:PHA02954    13 LPAVVYSTCTVPTMNNAKLTSTETSFNDkQKVTFTCDSGYYSLDPNAV-CETDKWKYENPCKKMCTVSDYVSELYDKPLY 91
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  749 NLKDHFN---ENDTVHFKCHEtfilhgsesiQCRKGSWTSPPQCIETQVckQPPTINNGkAATPLKPSYSDGDIVIYNCD 825
Cdd:PHA02954    92 EVNSTITlicKDETKYFRCEE----------KNGNTSWNDTVTCPNAEC--QPLQLEHG-SCQPVKEKYSFGEHITINCD 158
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  826 SGYQAEESNEITCTGGKWSTPPQCKEalaTCDKPPfISNGAIQGSelrKYKAGQSVTYRCINYYVMDGSPTVTCLQGRWS 905
Cdd:PHA02954   159 VGYEVIGASYISCTANSWNVIPSCQQ---KCDIPS-LSNGLISGS---TFSIGGVIHLSCKSGFTLTGSPSSTCIDGKWN 231
PHA02639 PHA02639
EEV host range protein; Provisional
85-268 6.07e-13

EEV host range protein; Provisional


Pssm-ID: 165022 [Multi-domain]  Cd Length: 295  Bit Score: 70.85  E-value: 6.07e-13
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473   85 CGHPGDLLYGsFDLTRGTDFVFGSRVEYQCDDGYQMIS---RVNYRECTATGWNNYVPQCEVRKClpVQPPQngrIVMTS 161
Cdd:PHA02639    22 CDKPDDISNG-FITELMEKYEIGKLIEYTCNTDYALIGdrfRTCIKDKNNAIWSNKAPFCMLKEC--NDPPS---IINGK 95
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  162 ISDVDEEYPYGYILLFECDSP---NYKLSGPNELYCMKSGEWSADVPACEVISCQEPSIPNGkMMSRLPRKMQYENKERI 238
Cdd:PHA02639    96 IYNKREMYKVGDEIYYVCNEHkgvQYSLVGNEKITCIQDKSWKPDPPICKMINCRFPALQNG-YINGIPSNKKFYYKTRV 174
                          170       180       190
                   ....*....|....*....|....*....|..
gi 1717019473  239 QYECDPGYKHESRGYSEC-IENGWNPA-PSCI 268
Cdd:PHA02639   175 GFSCKSGFDLVGEKYSTCnINATWFPSiPTCV 206
PHA02831 PHA02831
EEV host range protein; Provisional
813-960 3.07e-12

EEV host range protein; Provisional


Pssm-ID: 165176 [Multi-domain]  Cd Length: 268  Bit Score: 68.48  E-value: 3.07e-12
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  813 SYSDGDIVIYNCDSGYqaeESNEITCTGGKWSTPPQCKeALATCDKPPFISNGAIQGSElRKYKAGQSVTYRC----INY 888
Cdd:PHA02831    39 VYEENENLEYKCNNNF---DKVFVTCNNGSWSTKNMCI-GKRNCKDPVTILNGYIKNKK-DQYSFGDSVTYACkvnkLEK 113
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1717019473  889 YVMDGSPTVTCLQGRWSqPPTCFEALATCdQPPSISNGAIQGSElRKYKAGQSVTYRCINYYVMDGSPTVTC 960
Cdd:PHA02831   114 YSIVGNETVKCINKQWV-PKYPVCKLIRC-KYPALQNGFLNVFE-KKFYYGDIVNFKCKKGFILLGSSVSTC 182
PHA02831 PHA02831
EEV host range protein; Provisional
467-669 8.90e-12

EEV host range protein; Provisional


Pssm-ID: 165176 [Multi-domain]  Cd Length: 268  Bit Score: 66.94  E-value: 8.90e-12
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  467 YSDKpVFMAGDILQYECDEGYmtsDRNIIerlKCTESGWTKTPECIAIT-CSVDDEIPNGVSTPQKEEYENGHVLKFSCN 545
Cdd:PHA02831    35 YENK-VYEENENLEYKCNNNF---DKVFV---TCNNGSWSTKNMCIGKRnCKDPVTILNGYIKNKKDQYSFGDSVTYACK 107
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  546 ----ENYKIKGEELRQCYYFGWFPKTlPQCIEITCKRPSRKGALLSPHLQIYKHLDTVNISCEDGYKINGSDLIQC-YSF 620
Cdd:PHA02831   108 vnklEKYSIVGNETVKCINKQWVPKY-PVCKLIRCKYPALQNGFLNVFEKKFYYGDIVNFKCKKGFILLGSSVSTCdINS 186
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*....
gi 1717019473  621 GWYPKPPTCQEvgdeeentngtvDENHGVKKPSKLPTDSANRTNTNDTS 669
Cdd:PHA02831   187 IWYPGIPKCVK------------DKVHNEIQPNYLFDDLDEDFNNSTTN 223
PHA02831 PHA02831
EEV host range protein; Provisional
754-899 2.10e-11

EEV host range protein; Provisional


Pssm-ID: 165176 [Multi-domain]  Cd Length: 268  Bit Score: 65.78  E-value: 2.10e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  754 FNENDTVHFKCHETFilhGSESIQCRKGSWTSPPQCIETQVCKQPPTINNGKAATPlKPSYSDGDIVIYNCD----SGYQ 829
Cdd:PHA02831    40 YEENENLEYKCNNNF---DKVFVTCNNGSWSTKNMCIGKRNCKDPVTILNGYIKNK-KDQYSFGDSVTYACKvnklEKYS 115
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1717019473  830 AEESNEITCTGGKW-STPPQCKeaLATCdKPPFISNGAIQGSElRKYKAGQSVTYRCINYYVMDGSPTVTC 899
Cdd:PHA02831   116 IVGNETVKCINKQWvPKYPVCK--LIRC-KYPALQNGFLNVFE-KKFYYGDIVNFKCKKGFILLGSSVSTC 182
PHA02927 PHA02927
secreted complement-binding protein; Provisional
476-632 5.29e-11

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 64.67  E-value: 5.29e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  476 GDILQYECDEGYMTSDRNIIeRLKCTESGWTKTPECIAITCSVDDEIPNGVSTPQKEEYenGHVLKFSCNENYKIKGEEL 555
Cdd:PHA02927    47 GDTIEYLCLPGYRKQKMGPI-YAKCTGTGWTLFNQCIKRRCPSPRDIDNGQLDIGGVDF--GSSITYSCNSGYQLIGESK 123
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  556 RQCY--YFG---WFPKTlPQCIEITCKRP-SRKGALLSPHLQIYKHLDTVNISCEDGYKINGSDLIQCySFGWYPKPPTC 629
Cdd:PHA02927   124 SYCElgSTGsmvWNPEA-PICESVKCQSPpSISNGRHNGYEDFYTDGSVVTYSCNSGYSLIGNSGVLC-SGGEWSDPPTC 201

                   ...
gi 1717019473  630 QEV 632
Cdd:PHA02927   202 QIV 204
PHA02954 PHA02954
EEV membrane glycoprotein; Provisional
799-981 3.89e-10

EEV membrane glycoprotein; Provisional


Pssm-ID: 165263 [Multi-domain]  Cd Length: 317  Bit Score: 62.80  E-value: 3.89e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  799 PTINNGKAaTPLKPSYSDGDIVIYNCDSGYQAEESNEItCTGGKWSTPPQCKEALATCD-------KPPFISNGAI---- 867
Cdd:PHA02954    24 PTMNNAKL-TSTETSFNDKQKVTFTCDSGYYSLDPNAV-CETDKWKYENPCKKMCTVSDyvselydKPLYEVNSTItlic 101
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  868 -----------------------------QGSEL---------RKYKAGQSVTYRCINYYVMDGSPTVTCLQGRWSQPPT 909
Cdd:PHA02954   102 kdetkyfrceekngntswndtvtcpnaecQPLQLehgscqpvkEKYSFGEHITINCDVGYEVIGASYISCTANSWNVIPS 181
                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1717019473  910 CFEalaTCDQPpSISNGAIQGSelrKYKAGQSVTYRCINYYVMDGSPTVTCLQGRWSqppTCFEPCTASDEE 981
Cdd:PHA02954   182 CQQ---KCDIP-SLSNGLISGS---TFSIGGVIHLSCKSGFTLTGSPSSTCIDGKWN---PVLPICVRSNEE 243
PHA02927 PHA02927
secreted complement-binding protein; Provisional
1066-1210 5.08e-10

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 61.59  E-value: 5.08e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473 1066 GSFITFKCKTGFSPVPRQNMKMKCHDT-RLTYPKCTSSTPSKSCGPPLAIENGGISGTSiSDYVHGSSVEYRCARYYKLK 1144
Cdd:PHA02927   105 GSSITYSCNSGYQLIGESKSYCELGSTgSMVWNPEAPICESVKCQSPPSISNGRHNGYE-DFYTDGSVVTYSCNSGYSLI 183
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1717019473 1145 DPKPVVCNDGEWSNPPECvepctlnedQIFK------NNIVLSRQHRNEmfYTHMGFVEFECKYGYRFQGTS 1210
Cdd:PHA02927   184 GNSGVLCSGGEWSDPPTC---------QIVKcphptiSNGYLSSGFKRS--YSYNDNVDFKCKYGYKLSGSS 244
PHA02927 PHA02927
secreted complement-binding protein; Provisional
102-395 1.19e-09

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 60.44  E-value: 1.19e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  102 TDFVFGSRVEYQCDDGY--QMISRVnYRECTATGWNNYvPQCEVRKCLPVQPPQNGRIvmtSISDVDeeypYGYILLFEC 179
Cdd:PHA02927    42 ANYNIGDTIEYLCLPGYrkQKMGPI-YAKCTGTGWTLF-NQCIKRRCPSPRDIDNGQL---DIGGVD----FGSSITYSC 112
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  180 DSpNYKLSGPNELYC----MKSGEWSADVPACEVISCQEP-SIPNGKmmsrlprkmqyenkeriqyecdpgykhesrgys 254
Cdd:PHA02927   113 NS-GYQLIGESKSYCelgsTGSMVWNPEAPICESVKCQSPpSISNGR--------------------------------- 158
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  255 eciENGWNpapscieivcsfqnvvngnlqpekNVYRENERVNLICNKGYQPeYKDEFPKCTKTGWSSPLLCVHKDCSFPE 334
Cdd:PHA02927   159 ---HNGYE------------------------DFYTDGSVVTYSCNSGYSL-IGNSGVLCSGGEWSDPPTCQIVKCPHPT 210
                          250       260       270       280       290       300
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1717019473  335 IENGRLlqtqYSTYKNYYfpmRKGRKIDYICTEGFFTEEGNSwggIECTDEG-WSP-VPKCIK 395
Cdd:PHA02927   211 ISNGYL----SSGFKRSY---SYNDNVDFKCKYGYKLSGSSS---STCSPGNtWQPeLPKCVR 263
PHA02639 PHA02639
EEV host range protein; Provisional
856-971 3.03e-09

EEV host range protein; Provisional


Pssm-ID: 165022 [Multi-domain]  Cd Length: 295  Bit Score: 59.68  E-value: 3.03e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  856 CDKPPFISNGAIQgSELRKYKAGQSVTYRCINYYVMDGSPTVTCLQGR----WS-QPPTCFeaLATCDQPPSISNGAIQg 930
Cdd:PHA02639    22 CDKPDDISNGFIT-ELMEKYEIGKLIEYTCNTDYALIGDRFRTCIKDKnnaiWSnKAPFCM--LKECNDPPSIINGKIY- 97
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*..
gi 1717019473  931 SELRKYKAGQSVTYRCINY----YVMDGSPTVTCLQGR-WS-QPPTC 971
Cdd:PHA02639    98 NKREMYKVGDEIYYVCNEHkgvqYSLVGNEKITCIQDKsWKpDPPIC 144
PHA02817 PHA02817
EEV Host range protein; Provisional
141-269 3.19e-09

EEV Host range protein; Provisional


Pssm-ID: 165167 [Multi-domain]  Cd Length: 225  Bit Score: 58.80  E-value: 3.19e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  141 CEVRKClpVQPPQngrIVMTSISDVDEEYPYGYILLFECDSPN----YKLSGPNELYCMKSGEWSADVPACEVISCQEPS 216
Cdd:PHA02817    19 CDLNKC--CYPPS---IKNGYIYNKKTEYNIGSNVTFFCGNNTrgvrYTLVGEKNIICEKDGKWNKEFPVCKIIRCRFPA 93
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 1717019473  217 IPNGkMMSRLPRKMQYENKERIQYECDPGYKHESRGYSEC-IENGWNP-APSCIE 269
Cdd:PHA02817    94 LQNG-FVNGIPDSKKFYYESEVSFSCKPGFVLIGTKYSVCgINSSWIPkVPICSR 147
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
917-971 3.47e-09

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 54.01  E-value: 3.47e-09
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 1717019473  917 CDQPPSISNGAIQGSeLRKYKAGQSVTYRCINYYVMDGSPTVTCL-QGRWSQ-PPTC 971
Cdd:cd00033      1 CPPPPVPENGTVTGS-KGSYSYGSTVTYSCNEGYTLVGSSTITCTeNGGWSPpPPTC 56
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
856-910 5.18e-09

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 53.24  E-value: 5.18e-09
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 1717019473  856 CDKPPFISNGAIQGSeLRKYKAGQSVTYRCINYYVMDGSPTVTCL-QGRWSQ-PPTC 910
Cdd:cd00033      1 CPPPPVPENGTVTGS-KGSYSYGSTVTYSCNEGYTLVGSSTITCTeNGGWSPpPPTC 56
PHA02954 PHA02954
EEV membrane glycoprotein; Provisional
390-654 6.63e-09

EEV membrane glycoprotein; Provisional


Pssm-ID: 165263 [Multi-domain]  Cd Length: 317  Bit Score: 58.94  E-value: 6.63e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  390 VPKCIKEMCESFRVVNGYPESSAARYQVGDKGRYSCYQGYSTpegmSSGEIECLKNGWSVQPTCIKICTKPVLHHGHYsD 469
Cdd:PHA02954    13 LPAVVYSTCTVPTMNNAKLTSTETSFNDKQKVTFTCDSGYYS----LDPNAVCETDKWKYENPCKKMCTVSDYVSELY-D 87
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  470 KPVFMAGDILQYECDEGymtsdrniIERLKCTE----SGWTKTPECIAITCSvDDEIPNGVSTPQKEEYENGHVLKFSCN 545
Cdd:PHA02954    88 KPLYEVNSTITLICKDE--------TKYFRCEEkngnTSWNDTVTCPNAECQ-PLQLEHGSCQPVKEKYSFGEHITINCD 158
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  546 ENYKIKGEELRQCYYFGWfpKTLPQCIEiTCKRPSRKGALLSPhlQIYKHLDTVNISCEDGYKINGSDLIQCYSFGWYPK 625
Cdd:PHA02954   159 VGYEVIGASYISCTANSW--NVIPSCQQ-KCDIPSLSNGLISG--STFSIGGVIHLSCKSGFTLTGSPSSTCIDGKWNPV 233
                          250       260
                   ....*....|....*....|....*....
gi 1717019473  626 PPTCQEVGDEEENTNGTVDENHGVKKPSK 654
Cdd:PHA02954   234 LPICVRSNEEFDPVDDGPDDETDLSKLSK 262
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
795-850 1.69e-08

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 52.08  E-value: 1.69e-08
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 1717019473  795 CKQPPTINNGKAaTPLKPSYSDGDIVIYNCDSGYQAEESNEITCT-GGKWS-TPPQCK 850
Cdd:cd00033      1 CPPPPVPENGTV-TGSKGSYSYGSTVTYSCNEGYTLVGSSTITCTeNGGWSpPPPTCE 57
PHA02831 PHA02831
EEV host range protein; Provisional
685-838 1.70e-08

EEV host range protein; Provisional


Pssm-ID: 165176 [Multi-domain]  Cd Length: 268  Bit Score: 57.31  E-value: 1.70e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  685 NAETVPSKDYYNGDTVKYICNENCQlqgKEEIECKNEKWTSPPRCIKSTeKCPYPPELHNTVEQNLKDHFNENDTVHFKC 764
Cdd:PHA02831    31 NVDSYENKVYEENENLEYKCNNNFD---KVFVTCNNGSWSTKNMCIGKR-NCKDPVTILNGYIKNKKDQYSFGDSVTYAC 106
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1717019473  765 H----ETFILHGSESIQCRKGSWTSPPQCIETQVCKQpPTINNGKAATpLKPSYSDGDIVIYNCDSGYQAEESNEITC 838
Cdd:PHA02831   107 KvnklEKYSIVGNETVKCINKQWVPKYPVCKLIRCKY-PALQNGFLNV-FEKKFYYGDIVNFKCKKGFILLGSSVSTC 182
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
795-849 3.45e-08

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 50.99  E-value: 3.45e-08
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|....*..
gi 1717019473   795 CKQPPTINNGKAaTPLKPSYSDGDIVIYNCDSGYQAEESNEITCT-GGKWS-TPPQC 849
Cdd:smart00032    1 CPPPPDIENGTV-TSSSGTYSYGDTVTYSCDPGYTLIGSSTITCLeNGTWSpPPPTC 56
PHA02639 PHA02639
EEV host range protein; Provisional
790-971 3.55e-08

EEV host range protein; Provisional


Pssm-ID: 165022 [Multi-domain]  Cd Length: 295  Bit Score: 56.60  E-value: 3.55e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  790 IETQVCKQPPTINNGkAATPLKPSYSDGDIVIYNCDSGYQAEESNEITCTGGK----WST-PPQCkeALATCDKPPFISN 864
Cdd:PHA02639    17 VKSIYCDKPDDISNG-FITELMEKYEIGKLIEYTCNTDYALIGDRFRTCIKDKnnaiWSNkAPFC--MLKECNDPPSIIN 93
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  865 GAIQgSELRKYKAGQSVTYRCINY----YVMDGSPTVTCLQGR-WS-QPPTCfeALATCdQPPSISNGAIQG-SELRKYK 937
Cdd:PHA02639    94 GKIY-NKREMYKVGDEIYYVCNEHkgvqYSLVGNEKITCIQDKsWKpDPPIC--KMINC-RFPALQNGYINGiPSNKKFY 169
                          170       180       190
                   ....*....|....*....|....*....|....*.
gi 1717019473  938 AGQSVTYRCINYYVMDGSPTVTC-LQGRW-SQPPTC 971
Cdd:PHA02639   170 YKTRVGFSCKSGFDLVGEKYSTCnINATWfPSIPTC 205
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
736-790 7.43e-08

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 50.15  E-value: 7.43e-08
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 1717019473  736 CPYPPELHNTVEQNLKDHFNENDTVHFKCHETFILHGSESIQCRK-GSWT-SPPQCI 790
Cdd:cd00033      1 CPPPPVPENGTVTGSKGSYSYGSTVTYSCNEGYTLVGSSTITCTEnGGWSpPPPTCE 57
Sushi pfam00084
Sushi repeat (SCR repeat);
795-849 8.42e-08

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 49.81  E-value: 8.42e-08
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 1717019473  795 CKQPPTINNGKAaTPLKPSYSDGDIVIYNCDSGYQAEESNEITCTG-GKWS-TPPQC 849
Cdd:pfam00084    1 CPPPPDIPNGKV-SATKNEYNYGASVSYECDPGYRLVGSPTITCQEdGTWSpPFPEC 56
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
146-208 1.12e-07

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 49.77  E-value: 1.12e-07
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1717019473  146 CLPVQPPQNGRIVMTSisdvdEEYPYGYILLFECDsPNYKLSGPNELYCMKSGEWSADVPACE 208
Cdd:cd00033      1 CPPPPVPENGTVTGSK-----GSYSYGSTVTYSCN-EGYTLVGSSTITCTENGGWSPPPPTCE 57
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
917-971 1.96e-07

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 49.06  E-value: 1.96e-07
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|....*..
gi 1717019473   917 CDQPPSISNGAIQGSElRKYKAGQSVTYRCINYYVMDGSPTVTCL-QGRWS-QPPTC 971
Cdd:smart00032    1 CPPPPDIENGTVTSSS-GTYSYGDTVTYSCDPGYTLIGSSTITCLeNGTWSpPPPTC 56
PHA02831 PHA02831
EEV host range protein; Provisional
692-794 2.03e-07

EEV host range protein; Provisional


Pssm-ID: 165176 [Multi-domain]  Cd Length: 268  Bit Score: 53.84  E-value: 2.03e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  692 KDYYN-GDTVKYICN----ENCQLQGKEEIECKNEKWTsPPRCIKSTEKCPYPPeLHNTVEQNLKDHFNENDTVHFKCHE 766
Cdd:PHA02831    93 KDQYSfGDSVTYACKvnklEKYSIVGNETVKCINKQWV-PKYPVCKLIRCKYPA-LQNGFLNVFEKKFYYGDIVNFKCKK 170
                           90       100       110
                   ....*....|....*....|....*....|
gi 1717019473  767 TFILHGSESIQCRKGSWTSP--PQCIETQV 794
Cdd:PHA02831   171 GFILLGSSVSTCDINSIWYPgiPKCVKDKV 200
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
1108-1163 2.48e-07

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 48.61  E-value: 2.48e-07
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 1717019473 1108 CGPPLAIENGGISGTSiSDYVHGSSVEYRCARYYKLKDPKPVVCN-DGEWSN-PPECV 1163
Cdd:cd00033      1 CPPPPVPENGTVTGSK-GSYSYGSTVTYSCNEGYTLVGSSTITCTeNGGWSPpPPTCE 57
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
856-910 3.23e-07

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 48.29  E-value: 3.23e-07
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|....*..
gi 1717019473   856 CDKPPFISNGAIQGSElRKYKAGQSVTYRCINYYVMDGSPTVTCL-QGRWS-QPPTC 910
Cdd:smart00032    1 CPPPPDIENGTVTSSS-GTYSYGDTVTYSCDPGYTLIGSSTITCLeNGTWSpPPPTC 56
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
736-789 4.73e-07

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 47.91  E-value: 4.73e-07
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|....*.
gi 1717019473   736 CPYPPELHNTVEQNLKDHFNENDTVHFKCHETFILHGSESIQCRK-GSWT-SPPQC 789
Cdd:smart00032    1 CPPPPDIENGTVTSSSGTYSYGDTVTYSCDPGYTLIGSSTITCLEnGTWSpPPPTC 56
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
85-142 6.23e-07

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 47.46  E-value: 6.23e-07
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 1717019473   85 CGHPGDLLYGSFDLTRGTdFVFGSRVEYQCDDGYQMISrVNYRECTATG-WNNYVPQCE 142
Cdd:cd00033      1 CPPPPVPENGTVTGSKGS-YSYGSTVTYSCNEGYTLVG-SSTITCTENGgWSPPPPTCE 57
Sushi pfam00084
Sushi repeat (SCR repeat);
917-971 7.14e-07

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 47.11  E-value: 7.14e-07
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 1717019473  917 CDQPPSISNGAIQGSELRkYKAGQSVTYRCINYYVMDGSPTVTCLQ-GRWSQP-PTC 971
Cdd:pfam00084    1 CPPPPDIPNGKVSATKNE-YNYGASVSYECDPGYRLVGSPTITCQEdGTWSPPfPEC 56
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
85-141 8.36e-07

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 47.14  E-value: 8.36e-07
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|....*...
gi 1717019473    85 CGHPGDLLYGSFDLTRGTdFVFGSRVEYQCDDGYQMISRvNYRECTATG-WNNYVPQC 141
Cdd:smart00032    1 CPPPPDIENGTVTSSSGT-YSYGDTVTYSCDPGYTLIGS-STITCLENGtWSPPPPTC 56
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
1108-1162 1.64e-06

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 46.37  E-value: 1.64e-06
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|....*..
gi 1717019473  1108 CGPPLAIENGGISGTSiSDYVHGSSVEYRCARYYKLKDPKPVVC-NDGEWSNP-PEC 1162
Cdd:smart00032    1 CPPPPDIENGTVTSSS-GTYSYGDTVTYSCDPGYTLIGSSTITClENGTWSPPpPTC 56
Sushi pfam00084
Sushi repeat (SCR repeat);
85-141 2.18e-06

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 45.95  E-value: 2.18e-06
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 1717019473   85 CGHPGDLLYGSFDLTRGtDFVFGSRVEYQCDDGYQMISRvNYRECTATG-WNNYVPQC 141
Cdd:pfam00084    1 CPPPPDIPNGKVSATKN-EYNYGASVSYECDPGYRLVGS-PTITCQEDGtWSPPFPEC 56
PHA02639 PHA02639
EEV host range protein; Provisional
212-395 3.30e-06

EEV host range protein; Provisional


Pssm-ID: 165022 [Multi-domain]  Cd Length: 295  Bit Score: 50.43  E-value: 3.30e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  212 CQEPSIPNGKMMSRLPRKmqYENKERIQYECDPGYKHESRGYSECIENG----W-NPAPSCIEIVCSFQ-NVVNGNLQPE 285
Cdd:PHA02639    22 CDKPDDISNGFITELMEK--YEIGKLIEYTCNTDYALIGDRFRTCIKDKnnaiWsNKAPFCMLKECNDPpSIINGKIYNK 99
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  286 KNVYRENERVNLICNKGYQPEYK---DEFPKCTK-TGWS-SPLLCVHKDCSFPEIENGRLlqTQYSTYKNYYFPMRKGrk 360
Cdd:PHA02639   100 REMYKVGDEIYYVCNEHKGVQYSlvgNEKITCIQdKSWKpDPPICKMINCRFPALQNGYI--NGIPSNKKFYYKTRVG-- 175
                          170       180       190
                   ....*....|....*....|....*....|....*..
gi 1717019473  361 idYICTEGF-FTEEGNSWGGIECTdegWSP-VPKCIK 395
Cdd:PHA02639   176 --FSCKSGFdLVGEKYSTCNINAT---WFPsIPTCVR 207
PHA02639 PHA02639
EEV host range protein; Provisional
476-629 3.71e-06

EEV host range protein; Provisional


Pssm-ID: 165022 [Multi-domain]  Cd Length: 295  Bit Score: 50.43  E-value: 3.71e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  476 GDILQYECDEGY-MTSDRNIIERLKCTESGWT-KTPECIAITCSVDDEIPNGVSTPQKEEYENGHVLKFSCNEN----YK 549
Cdd:PHA02639    43 GKLIEYTCNTDYaLIGDRFRTCIKDKNNAIWSnKAPFCMLKECNDPPSIINGKIYNKREMYKVGDEIYYVCNEHkgvqYS 122
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  550 IKGEELRQCYYFGWFPKTLPQCIEITCKRPSRKGALLS--PHLQIYKHLDTVNISCEDGYKINGSDLIQC-YSFGWYPKP 626
Cdd:PHA02639   123 LVGNEKITCIQDKSWKPDPPICKMINCRFPALQNGYINgiPSNKKFYYKTRVGFSCKSGFDLVGEKYSTCnINATWFPSI 202

                   ...
gi 1717019473  627 PTC 629
Cdd:PHA02639   203 PTC 205
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
146-207 4.26e-06

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 45.21  E-value: 4.26e-06
                            10        20        30        40        50        60
                    ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1717019473   146 CLPVQPPQNGRIVMTSisdvdEEYPYGYILLFECDsPNYKLSGPNELYCMKSGEWSADVPAC 207
Cdd:smart00032    1 CPPPPDIENGTVTSSS-----GTYSYGDTVTYSCD-PGYTLIGSSTITCLENGTWSPPPPTC 56
PHA02817 PHA02817
EEV Host range protein; Provisional
511-629 4.65e-06

EEV Host range protein; Provisional


Pssm-ID: 165167 [Multi-domain]  Cd Length: 225  Bit Score: 49.17  E-value: 4.65e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  511 CIAITCSVDDEIPNGVSTPQKEEYENGHVLKFSCNEN-----YKIKGEELRQCYYFGWFPKTLPQCIEITCKRPSRKGAL 585
Cdd:PHA02817    19 CDLNKCCYPPSIKNGYIYNKKTEYNIGSNVTFFCGNNtrgvrYTLVGEKNIICEKDGKWNKEFPVCKIIRCRFPALQNGF 98
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*..
gi 1717019473  586 LS--PHLQIYKHLDTVNISCEDGYKINGSDLIQC-YSFGWYPKPPTC 629
Cdd:PHA02817    99 VNgiPDSKKFYYESEVSFSCKPGFVLIGTKYSVCgINSSWIPKVPIC 145
Sushi pfam00084
Sushi repeat (SCR repeat);
856-910 4.83e-06

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 44.80  E-value: 4.83e-06
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 1717019473  856 CDKPPFISNGAIQGSELRkYKAGQSVTYRCINYYVMDGSPTVTCLQ-GRWSQP-PTC 910
Cdd:pfam00084    1 CPPPPDIPNGKVSATKNE-YNYGASVSYECDPGYRLVGSPTITCQEdGTWSPPfPEC 56
Sushi pfam00084
Sushi repeat (SCR repeat);
146-207 5.03e-06

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 44.80  E-value: 5.03e-06
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1717019473  146 CLPVQPPQNGRIVMTsisdvDEEYPYGYILLFECDsPNYKLSGPNELYCMKSGEWSADVPAC 207
Cdd:pfam00084    1 CPPPPDIPNGKVSAT-----KNEYNYGASVSYECD-PGYRLVGSPTITCQEDGTWSPPFPEC 56
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
677-730 5.84e-06

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 44.76  E-value: 5.84e-06
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 1717019473  677 CPPAPQLENAETVPSKDYYN-GDTVKYICNENCQLQGKEEIEC-KNEKWT-SPPRCI 730
Cdd:cd00033      1 CPPPPVPENGTVTGSKGSYSyGSTVTYSCNEGYTLVGSSTITCtENGGWSpPPPTCE 57
PHA02954 PHA02954
EEV membrane glycoprotein; Provisional
265-490 9.42e-06

EEV membrane glycoprotein; Provisional


Pssm-ID: 165263 [Multi-domain]  Cd Length: 317  Bit Score: 49.31  E-value: 9.42e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  265 PSCIEIVCSFQNVVNGNLQPEKNVYRENERVNLICNKGYQPEYKDEFPKCTKTGWSSPL--LCVHKDcSFPEIENGRLLQ 342
Cdd:PHA02954    14 PAVVYSTCTVPTMNNAKLTSTETSFNDKQKVTFTCDSGYYSLDPNAVCETDKWKYENPCkkMCTVSD-YVSELYDKPLYE 92
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  343 TQYStyknyyfpmrkgrkIDYIC---TEGFFTEEGNSwggiectDEGWSPVPKCIKEMCESFRVVNGYPESSAARYQVGD 419
Cdd:PHA02954    93 VNST--------------ITLICkdeTKYFRCEEKNG-------NTSWNDTVTCPNAECQPLQLEHGSCQPVKEKYSFGE 151
                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1717019473  420 KGRYSCYQGYstpEGMSSGEIECLKNGWSVQPTCIKICTKPVLHHGHYSDKpVFMAGDILQYECDEGYMTS 490
Cdd:PHA02954   152 HITINCDVGY---EVIGASYISCTANSWNVIPSCQQKCDIPSLSNGLISGS-TFSIGGVIHLSCKSGFTLT 218
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
677-729 1.41e-05

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 43.67  E-value: 1.41e-05
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|....*.
gi 1717019473   677 CPPAPQLENAETVPSKDYYN-GDTVKYICNENCQLQGKEEIEC-KNEKWT-SPPRC 729
Cdd:smart00032    1 CPPPPDIENGTVTSSSGTYSyGDTVTYSCDPGYTLIGSSTITClENGTWSpPPPTC 56
PHA02639 PHA02639
EEV host range protein; Provisional
513-632 1.78e-05

EEV host range protein; Provisional


Pssm-ID: 165022 [Multi-domain]  Cd Length: 295  Bit Score: 48.12  E-value: 1.78e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  513 AITCSVDDEIPNGVSTPQKEEYENGHVLKFSCNENYKIKGEELRQCYYFG----WFPKTlPQCIEITCKR-PSRKGALLS 587
Cdd:PHA02639    19 SIYCDKPDDISNGFITELMEKYEIGKLIEYTCNTDYALIGDRFRTCIKDKnnaiWSNKA-PFCMLKECNDpPSIINGKIY 97
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|
gi 1717019473  588 PHLQIYKHLDTVNISCED----GYKINGSDLIQC-YSFGWYPKPPTCQEV 632
Cdd:PHA02639    98 NKREMYKVGDEIYYVCNEhkgvQYSLVGNEKITCiQDKSWKPDPPICKMI 147
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
516-571 2.89e-05

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 42.90  E-value: 2.89e-05
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|....*.
gi 1717019473   516 CSVDDEIPNGVSTPQKEEYENGHVLKFSCNENYKIKGEELRQCYYFGWFPKTLPQC 571
Cdd:smart00032    1 CPPPPDIENGTVTSSSGTYSYGDTVTYSCDPGYTLIGSSTITCLENGTWSPPPPTC 56
Sushi pfam00084
Sushi repeat (SCR repeat);
1108-1162 3.48e-05

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 42.49  E-value: 3.48e-05
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 1717019473 1108 CGPPLAIENGGISGTSiSDYVHGSSVEYRCARYYKLKDPKPVVC-NDGEWSNP-PEC 1162
Cdd:pfam00084    1 CPPPPDIPNGKVSATK-NEYNYGASVSYECDPGYRLVGSPTITCqEDGTWSPPfPEC 56
Sushi pfam00084
Sushi repeat (SCR repeat);
736-789 5.21e-05

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 42.10  E-value: 5.21e-05
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1717019473  736 CPYPPELHNTVEQNLKDHFNENDTVHFKCHETFILHGSESIQCRK-GSWTSP-PQC 789
Cdd:pfam00084    1 CPPPPDIPNGKVSATKNEYNYGASVSYECDPGYRLVGSPTITCQEdGTWSPPfPEC 56
Sushi pfam00084
Sushi repeat (SCR repeat);
677-729 5.21e-05

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 42.10  E-value: 5.21e-05
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1717019473  677 CPPAPQLENAETVPSKDYYN-GDTVKYICNENCQLQGKEEIEC-KNEKWTSP-PRC 729
Cdd:pfam00084    1 CPPPPDIPNGKVSATKNEYNyGASVSYECDPGYRLVGSPTITCqEDGTWSPPfPEC 56
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
579-630 1.15e-04

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 40.91  E-value: 1.15e-04
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|...
gi 1717019473  579 PSRKGALLSPHLQIYKHLDTVNISCEDGYKINGSDLIQCYSFG-WYPKPPTCQ 630
Cdd:cd00033      5 PVPENGTVTGSKGSYSYGSTVTYSCNEGYTLVGSSTITCTENGgWSPPPPTCE 57
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
516-572 1.99e-04

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 40.52  E-value: 1.99e-04
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 1717019473  516 CSVDDEIPNGVSTPQKEEYENGHVLKFSCNENYKIKGEELRQCYYFG-WFPkTLPQCI 572
Cdd:cd00033      1 CPPPPVPENGTVTGSKGSYSYGSTVTYSCNEGYTLVGSSTITCTENGgWSP-PPPTCE 57
PHA02831 PHA02831
EEV host range protein; Provisional
285-429 3.62e-04

EEV host range protein; Provisional


Pssm-ID: 165176 [Multi-domain]  Cd Length: 268  Bit Score: 43.83  E-value: 3.62e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  285 EKNVYRENERVNLICNKGYQpeykDEFPKCTKTGWSSPLLCVHK-DCSFP-EIENGRL--LQTQYSTyknyyfpmrkGRK 360
Cdd:PHA02831    36 ENKVYEENENLEYKCNNNFD----KVFVTCNNGSWSTKNMCIGKrNCKDPvTILNGYIknKKDQYSF----------GDS 101
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1717019473  361 IDYICTEG---FFTEEGNSwgGIECTDEGWSP-VPKCIKEMCESFRVVNGYPESSAARYQVGDKGRYSCYQGY 429
Cdd:PHA02831   102 VTYACKVNkleKYSIVGNE--TVKCINKQWVPkYPVCKLIRCKYPALQNGFLNVFEKKFYYGDIVNFKCKKGF 172
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
212-268 4.03e-04

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 39.37  E-value: 4.03e-04
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  212 CQEPSIP-NGKMMSRLPRkmqYENKERIQYECDPGYKHESRGYSECIENG-WNP-APSCI 268
Cdd:cd00033      1 CPPPPVPeNGTVTGSKGS---YSYGSTVTYSCNEGYTLVGSSTITCTENGgWSPpPPTCE 57
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
215-267 6.46e-04

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 39.05  E-value: 6.46e-04
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|....*
gi 1717019473   215 PSIPNGKMMSRLPRkmqYENKERIQYECDPGYKHESRGYSECIENG-WNP-APSC 267
Cdd:smart00032    5 PDIENGTVTSSSGT---YSYGDTVTYSCDPGYTLIGSSTITCLENGtWSPpPPTC 56
Sushi pfam00084
Sushi repeat (SCR repeat);
516-571 8.34e-04

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 38.63  E-value: 8.34e-04
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1717019473  516 CSVDDEIPNGVSTPQKEEYENGHVLKFSCNENYKIKGEELRQCYYFGWFPKTLPQC 571
Cdd:pfam00084    1 CPPPPDIPNGKVSATKNEYNYGASVSYECDPGYRLVGSPTITCQEDGTWSPPFPEC 56
PHA02639 PHA02639
EEV host range protein; Provisional
692-838 8.62e-04

EEV host range protein; Provisional


Pssm-ID: 165022 [Multi-domain]  Cd Length: 295  Bit Score: 42.73  E-value: 8.62e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  692 KDYYNGDTVKYICNENCQLQGKEEIECKNEK----WTS-PPRCIksTEKCPYPPELHNTVEQNLKDHFNENDTVHFKCHE 766
Cdd:PHA02639    38 EKYEIGKLIEYTCNTDYALIGDRFRTCIKDKnnaiWSNkAPFCM--LKECNDPPSIINGKIYNKREMYKVGDEIYYVCNE 115
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1717019473  767 ----TFILHGSESIQCRKG-SWTSPPQCIETQVCKQPPTINNGKAATPLKPSYSDGDIVIYNCDSGYQAEESNEITC 838
Cdd:PHA02639   116 hkgvQYSLVGNEKITCIQDkSWKPDPPICKMINCRFPALQNGYINGIPSNKKFYYKTRVGFSCKSGFDLVGEKYSTC 192
PHA02831 PHA02831
EEV host range protein; Provisional
232-396 8.82e-04

EEV host range protein; Provisional


Pssm-ID: 165176 [Multi-domain]  Cd Length: 268  Bit Score: 42.67  E-value: 8.82e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  232 YENKERIQYECDPGYkheSRGYSECIENGWNPAPSCI-EIVCSFQ-NVVNGNLQPEKNVYRENERVNLICNKGYQPEYK- 308
Cdd:PHA02831    40 YEENENLEYKCNNNF---DKVFVTCNNGSWSTKNMCIgKRNCKDPvTILNGYIKNKKDQYSFGDSVTYACKVNKLEKYSi 116
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  309 --DEFPKCTKTGW--SSPlLCVHKDCSFPEIENGRLlqtqYSTYKNYYFpmrkGRKIDYICTEGF-FTEEGNSWGGIECT 383
Cdd:PHA02831   117 vgNETVKCINKQWvpKYP-VCKLIRCKYPALQNGFL----NVFEKKFYY----GDIVNFKCKKGFiLLGSSVSTCDINSI 187
                          170
                   ....*....|....
gi 1717019473  384 degWSP-VPKCIKE 396
Cdd:PHA02831   188 ---WYPgIPKCVKD 198
PHA02817 PHA02817
EEV Host range protein; Provisional
853-960 9.56e-04

EEV Host range protein; Provisional


Pssm-ID: 165167 [Multi-domain]  Cd Length: 225  Bit Score: 42.24  E-value: 9.56e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  853 LATCDKPPFISNGAIQGSElRKYKAGQSVTYRCINY-----YVMDGSPTVTCLQ-GRWS-QPPTCfeALATCdQPPSISN 925
Cdd:PHA02817    21 LNKCCYPPSIKNGYIYNKK-TEYNIGSNVTFFCGNNtrgvrYTLVGEKNIICEKdGKWNkEFPVC--KIIRC-RFPALQN 96
                           90       100       110
                   ....*....|....*....|....*....|....*.
gi 1717019473  926 GAIQG-SELRKYKAGQSVTYRCINYYVMDGSPTVTC 960
Cdd:PHA02817    97 GFVNGiPDSKKFYYESEVSFSCKPGFVLIGTKYSVC 132
PHA02639 PHA02639
EEV host range protein; Provisional
403-572 9.59e-04

EEV host range protein; Provisional


Pssm-ID: 165022 [Multi-domain]  Cd Length: 295  Bit Score: 42.73  E-value: 9.59e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  403 VVNGYPESSAARYQVGDKGRYSCYQGYSTpegMSSGEIECLKNG----WSVQ-PTC-IKICTKP--VLHHGHYSDKPVFM 474
Cdd:PHA02639    28 ISNGFITELMEKYEIGKLIEYTCNTDYAL---IGDRFRTCIKDKnnaiWSNKaPFCmLKECNDPpsIINGKIYNKREMYK 104
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  475 AGDILQYECDEgYMTSDRNII--ERLKCTE-SGWTKTPE-CIAITC---SVDDEIPNGVSTPQKEEYENGhvLKFSCNEN 547
Cdd:PHA02639   105 VGDEIYYVCNE-HKGVQYSLVgnEKITCIQdKSWKPDPPiCKMINCrfpALQNGYINGIPSNKKFYYKTR--VGFSCKSG 181
                          170       180
                   ....*....|....*....|....*.
gi 1717019473  548 YKIKGEELRQCYYFG-WFPkTLPQCI 572
Cdd:PHA02639   182 FDLVGEKYSTCNINAtWFP-SIPTCV 206
PHA02817 PHA02817
EEV Host range protein; Provisional
676-791 1.02e-03

EEV Host range protein; Provisional


Pssm-ID: 165167 [Multi-domain]  Cd Length: 225  Bit Score: 42.24  E-value: 1.02e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  676 KCPPAPQLENAETVPSKDYYN-GDTVKYICNENCQ-----LQGKEEIEC-KNEKWT-SPPRCikSTEKCPYPPeLHNTVE 747
Cdd:PHA02817    23 KCCYPPSIKNGYIYNKKTEYNiGSNVTFFCGNNTRgvrytLVGEKNIICeKDGKWNkEFPVC--KIIRCRFPA-LQNGFV 99
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*...
gi 1717019473  748 QNLKDH--FNENDTVHFKCHETFILHGSESIQCRKGSWTSP--PQCIE 791
Cdd:PHA02817   100 NGIPDSkkFYYESEVSFSCKPGFVLIGTKYSVCGINSSWIPkvPICSR 147
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
22-81 1.17e-03

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 38.21  E-value: 1.17e-03
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1717019473   22 CGPPDSIPIAELVGEwdKESYPHGTEATYLCRPGYIKVGRILWKCL-NGEWKevNPMVKCR 81
Cdd:cd00033      1 CPPPPVPENGTVTGS--KGSYSYGSTVTYSCNEGYTLVGSSTITCTeNGGWS--PPPPTCE 57
PHA02831 PHA02831
EEV host range protein; Provisional
871-1077 1.22e-03

EEV host range protein; Provisional


Pssm-ID: 165176 [Multi-domain]  Cd Length: 268  Bit Score: 42.29  E-value: 1.22e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  871 ELRKYKAGQSVTYRCINYYvmdGSPTVTCLQGRWSQPPTCFeALATCDQPPSISNGAIQGSElRKYKAGQSVTYRC---- 946
Cdd:PHA02831    36 ENKVYEENENLEYKCNNNF---DKVFVTCNNGSWSTKNMCI-GKRNCKDPVTILNGYIKNKK-DQYSFGDSVTYACkvnk 110
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  947 INYYVMDGSPTVTCLQGRW-SQPPTCfepctasdeemktnniqlrwlddeKLyvqhghrveFTCKYnyvvlPPSQEFRLT 1025
Cdd:PHA02831   111 LEKYSIVGNETVKCINKQWvPKYPVC------------------------KL---------IRCKY-----PALQNGFLN 152
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|..
gi 1717019473 1026 CIRGHLDYpkcikhgscmvslvelvknnlelgkeytevlhGSFITFKCKTGF 1077
Cdd:PHA02831   153 VFEKKFYY--------------------------------GDIVNFKCKKGF 172
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
576-629 1.70e-03

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 37.89  E-value: 1.70e-03
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|....*.
gi 1717019473   576 CKRPSR-KGALLSPHLQIYKHLDTVNISCEDGYKINGSDLIQCYSFG-WYPKPPTC 629
Cdd:smart00032    1 CPPPPDiENGTVTSSSGTYSYGDTVTYSCDPGYTLIGSSTITCLENGtWSPPPPTC 56
PHA02831 PHA02831
EEV host range protein; Provisional
109-285 2.17e-03

EEV host range protein; Provisional


Pssm-ID: 165176 [Multi-domain]  Cd Length: 268  Bit Score: 41.52  E-value: 2.17e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  109 RVEYQCDDGYQMIsrvnYRECTATGWNNYVPQCEVRKCL-PVQppqngrIVMTSISDVDEEYPYGYILLFECDS---PNY 184
Cdd:PHA02831    45 NLEYKCNNNFDKV----FVTCNNGSWSTKNMCIGKRNCKdPVT------ILNGYIKNKKDQYSFGDSVTYACKVnklEKY 114
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473  185 KLSGPNELYCMkSGEWSADVPACEVISCQEPSIPNGkMMSRLPRKMQYenKERIQYECDPGYKHESRGYSEC-IENGWNP 263
Cdd:PHA02831   115 SIVGNETVKCI-NKQWVPKYPVCKLIRCKYPALQNG-FLNVFEKKFYY--GDIVNFKCKKGFILLGSSVSTCdINSIWYP 190
                          170       180
                   ....*....|....*....|...
gi 1717019473  264 A-PSCIeivcsfQNVVNGNLQPE 285
Cdd:PHA02831   191 GiPKCV------KDKVHNEIQPN 207
Sushi pfam00084
Sushi repeat (SCR repeat);
215-267 2.39e-03

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 37.48  E-value: 2.39e-03
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 1717019473  215 PSIPNGKMMSRLPrkmQYENKERIQYECDPGYKHESRGYSECIENG-WNPA-PSC 267
Cdd:pfam00084    5 PDIPNGKVSATKN---EYNYGASVSYECDPGYRLVGSPTITCQEDGtWSPPfPEC 56
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
403-454 2.49e-03

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 37.44  E-value: 2.49e-03
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1717019473  403 VVNGYPESSAARYQVGDKGRYSCYQGYsTPEGmsSGEIECLKNG-WS-VQPTCI 454
Cdd:cd00033      7 PENGTVTGSKGSYSYGSTVTYSCNEGY-TLVG--SSTITCTENGgWSpPPPTCE 57
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
22-80 5.12e-03

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 36.35  E-value: 5.12e-03
                            10        20        30        40        50        60
                    ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717019473    22 CGPPDSIPIAELVGEwdKESYPHGTEATYLCRPGYIKVGRILWKCL-NGEWKevNPMVKC 80
Cdd:smart00032    1 CPPPPDIENGTVTSS--SGTYSYGDTVTYSCDPGYTLIGSSTITCLeNGTWS--PPPPTC 56
Sushi pfam00084
Sushi repeat (SCR repeat);
22-76 9.61e-03

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 35.55  E-value: 9.61e-03
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1717019473   22 CGPPDSIPIAELVGEwdKESYPHGTEATYLCRPGYIKVGRILWKCL-NGEWKEVNP 76
Cdd:pfam00084    1 CPPPPDIPNGKVSAT--KNEYNYGASVSYECDPGYRLVGSPTITCQeDGTWSPPFP 54
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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