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Conserved domains on  [gi|1624462172|ref|XP_028861195|]
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UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase, putative [Plasmodium malariae]

Protein Classification

UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase( domain architecture ID 10160631)

UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase catalyzes the transfer of GlcNAc-1-P from UDP-GlcNAc onto the carrier lipid dolichyl phosphate in the dolichol pathway of N-linked protein glycosylation; belongs to glycosyltransferase family 4

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
GT_GPT_euk cd06855
UDP-GlcNAc:dolichol-P GlcNAc-1-P transferase (GPT) catalyzes the transfer of GlcNAc-1-P from ...
68-353 7.93e-115

UDP-GlcNAc:dolichol-P GlcNAc-1-P transferase (GPT) catalyzes the transfer of GlcNAc-1-P from UDP-GlcNAc to dolichol-P to form GlcNAc-P-P-dolichol. The reaction is the first step in the assembly of dolichol-linked oligosaccharide intermediates and is essential for eukaryotic N-glycosylation. GPT activity has been identified in all eukaryotic cells examined to date. A series of six conserved motifs designated A through F, ranging in length from 5 to 13 amino acid residues, has been identified in this family. They have been determined to be important for stable expression, substrate binding, or catalytic activities.


:

Pssm-ID: 133465  Cd Length: 283  Bit Score: 336.53  E-value: 7.93e-115
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624462172  68 LPKFIRFLNEKGLYGVDLNKISKDKVAEPIGLFPSILYFIFVLIYQLIYYN---DHKILLEYNAGLLSIIFMTFLGFIDD 144
Cdd:cd06855     1 IPKFGPLFIKAGLYGIDLNKNGEEKIPESAGLVPGIVFLIVLFLFIPFPFLkdfPHDKLVEYLSALLSICCMTFLGFADD 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624462172 145 VLELKWRYKVILPFFASLPLLLSYSGETNIRIPSFLNFIFKERIINIGFFYYLYIILLSVFCTNAINIYAGINGLEIGQS 224
Cdd:cd06855    81 VLDLRWRHKLILPTFASLPLLMVYYGNTGITLPIVPLRPLLGTLIDLGILYYVYMILLAVFCTNSINIYAGINGLEVGQS 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624462172 225 LIISFFISIHNLTEIILNvgnpqiEGGLILKQHFLSIIFTLPFISINLATFAFNFYPSKGFVGNTLTYFCGIFLAVVSIF 304
Cdd:cd06855   161 LVIALSILLYNLLELNGS------SGSMTLDAHLFSLYLLLPFIAVSLALLYYNWYPSKVFVGDTFTYFAGMVFAVVGIL 234
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 1624462172 305 GHYSKTLILFLIPQFLNFFLSLPQLYNIVPCPRHRLPVINTKTNKLNYS 353
Cdd:cd06855   235 GHFSKTLLLFFIPQIINFLYSLPQLFGIVPCPRHRLPKFNPKTGLLEPS 283
 
Name Accession Description Interval E-value
GT_GPT_euk cd06855
UDP-GlcNAc:dolichol-P GlcNAc-1-P transferase (GPT) catalyzes the transfer of GlcNAc-1-P from ...
68-353 7.93e-115

UDP-GlcNAc:dolichol-P GlcNAc-1-P transferase (GPT) catalyzes the transfer of GlcNAc-1-P from UDP-GlcNAc to dolichol-P to form GlcNAc-P-P-dolichol. The reaction is the first step in the assembly of dolichol-linked oligosaccharide intermediates and is essential for eukaryotic N-glycosylation. GPT activity has been identified in all eukaryotic cells examined to date. A series of six conserved motifs designated A through F, ranging in length from 5 to 13 amino acid residues, has been identified in this family. They have been determined to be important for stable expression, substrate binding, or catalytic activities.


Pssm-ID: 133465  Cd Length: 283  Bit Score: 336.53  E-value: 7.93e-115
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624462172  68 LPKFIRFLNEKGLYGVDLNKISKDKVAEPIGLFPSILYFIFVLIYQLIYYN---DHKILLEYNAGLLSIIFMTFLGFIDD 144
Cdd:cd06855     1 IPKFGPLFIKAGLYGIDLNKNGEEKIPESAGLVPGIVFLIVLFLFIPFPFLkdfPHDKLVEYLSALLSICCMTFLGFADD 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624462172 145 VLELKWRYKVILPFFASLPLLLSYSGETNIRIPSFLNFIFKERIINIGFFYYLYIILLSVFCTNAINIYAGINGLEIGQS 224
Cdd:cd06855    81 VLDLRWRHKLILPTFASLPLLMVYYGNTGITLPIVPLRPLLGTLIDLGILYYVYMILLAVFCTNSINIYAGINGLEVGQS 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624462172 225 LIISFFISIHNLTEIILNvgnpqiEGGLILKQHFLSIIFTLPFISINLATFAFNFYPSKGFVGNTLTYFCGIFLAVVSIF 304
Cdd:cd06855   161 LVIALSILLYNLLELNGS------SGSMTLDAHLFSLYLLLPFIAVSLALLYYNWYPSKVFVGDTFTYFAGMVFAVVGIL 234
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 1624462172 305 GHYSKTLILFLIPQFLNFFLSLPQLYNIVPCPRHRLPVINTKTNKLNYS 353
Cdd:cd06855   235 GHFSKTLLLFFIPQIINFLYSLPQLFGIVPCPRHRLPKFNPKTGLLEPS 283
Rfe COG0472
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate ...
51-316 2.46e-21

UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase [Cell wall/membrane/envelope biogenesis]; UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase is part of the Pathway/BioSystem: Mureine biosynthesis


Pssm-ID: 440240  Cd Length: 288  Bit Score: 92.88  E-value: 2.46e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624462172  51 LFYILSCLFLFKVTFICLPKFIRFLNEKGLygVDL-NKISKDKVAEP----IGLFPSILyfIFVLIYQLIYYNDHKILLe 125
Cdd:COG0472     1 LRLLLAFLLAFLLSLLLTPLLIRLARRLGL--VDDpNERKSHKRPTPrmggIAIFLGFL--LALLLLALLSNPELLLLL- 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624462172 126 ynaglLSIIFMTFLGFIDDVLELKWRYKVILPFFASLPLLLSYsgetnIRIPSFLNFIFKerIINIGFFYYLYIILLSVF 205
Cdd:COG0472    76 -----LGALLLGLIGFLDDLLGLSARQKLLGQLLAALLLVLLL-----LRITSLTIPFFG--LLDLGWLYIPLTVFWIVG 143
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624462172 206 CTNAINIYAGINGLEIGQSLIISFFISIhnlteIILNVGNPQIegglilkqhflsIIFTLPFISINLATFAFNFYPSKGF 285
Cdd:COG0472   144 VSNAVNLTDGLDGLAAGVSLIAALALAI-----IAYLAGQGEL------------ALLAAALAGALLGFLWFNFPPAKIF 206
                         250       260       270
                  ....*....|....*....|....*....|.
gi 1624462172 286 VGNTLTYFCGIFLAVVSIFGHYSKTLILFLI 316
Cdd:COG0472   207 MGDTGSLFLGFALAALAILGRQEGASLLLLL 237
Glycos_transf_4 pfam00953
Glycosyl transferase family 4;
130-305 2.84e-20

Glycosyl transferase family 4;


Pssm-ID: 460008  Cd Length: 158  Bit Score: 86.89  E-value: 2.84e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624462172 130 LLSIIFMTFLGFIDDVLELKWRYKVILPFFASLPLLLSYsgetNIRIPSFLNFiFKERIINIGFFYYLYIILLSVFC-TN 208
Cdd:pfam00953   4 LLGALLIGLIGLIDDLLGLSARIKLLLQALAALILLVLG----GIGLTSLGLP-FGGGSLELGPWLSILLTLFAIVGlTN 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624462172 209 AINIYAGINGLEIGQSLIISFFISIHNLTEiilnvgnpqiegglilkQHFLSIIFTLPFISINLATFAFNFYPSKGFVGN 288
Cdd:pfam00953  79 AVNFIDGLDGLAGGVAIIAALALGIIAYLL-----------------GNLELALLSLALLGALLGFLPFNFYPAKIFMGD 141
                         170
                  ....*....|....*..
gi 1624462172 289 TLTYFCGIFLAVVSIFG 305
Cdd:pfam00953 142 SGSLFLGFLLAVLAIIG 158
 
Name Accession Description Interval E-value
GT_GPT_euk cd06855
UDP-GlcNAc:dolichol-P GlcNAc-1-P transferase (GPT) catalyzes the transfer of GlcNAc-1-P from ...
68-353 7.93e-115

UDP-GlcNAc:dolichol-P GlcNAc-1-P transferase (GPT) catalyzes the transfer of GlcNAc-1-P from UDP-GlcNAc to dolichol-P to form GlcNAc-P-P-dolichol. The reaction is the first step in the assembly of dolichol-linked oligosaccharide intermediates and is essential for eukaryotic N-glycosylation. GPT activity has been identified in all eukaryotic cells examined to date. A series of six conserved motifs designated A through F, ranging in length from 5 to 13 amino acid residues, has been identified in this family. They have been determined to be important for stable expression, substrate binding, or catalytic activities.


Pssm-ID: 133465  Cd Length: 283  Bit Score: 336.53  E-value: 7.93e-115
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624462172  68 LPKFIRFLNEKGLYGVDLNKISKDKVAEPIGLFPSILYFIFVLIYQLIYYN---DHKILLEYNAGLLSIIFMTFLGFIDD 144
Cdd:cd06855     1 IPKFGPLFIKAGLYGIDLNKNGEEKIPESAGLVPGIVFLIVLFLFIPFPFLkdfPHDKLVEYLSALLSICCMTFLGFADD 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624462172 145 VLELKWRYKVILPFFASLPLLLSYSGETNIRIPSFLNFIFKERIINIGFFYYLYIILLSVFCTNAINIYAGINGLEIGQS 224
Cdd:cd06855    81 VLDLRWRHKLILPTFASLPLLMVYYGNTGITLPIVPLRPLLGTLIDLGILYYVYMILLAVFCTNSINIYAGINGLEVGQS 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624462172 225 LIISFFISIHNLTEIILNvgnpqiEGGLILKQHFLSIIFTLPFISINLATFAFNFYPSKGFVGNTLTYFCGIFLAVVSIF 304
Cdd:cd06855   161 LVIALSILLYNLLELNGS------SGSMTLDAHLFSLYLLLPFIAVSLALLYYNWYPSKVFVGDTFTYFAGMVFAVVGIL 234
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 1624462172 305 GHYSKTLILFLIPQFLNFFLSLPQLYNIVPCPRHRLPVINTKTNKLNYS 353
Cdd:cd06855   235 GHFSKTLLLFFIPQIINFLYSLPQLFGIVPCPRHRLPKFNPKTGLLEPS 283
GT_GPT_like cd06851
This family includes eukaryotic UDP-GlcNAc:dolichol-P GlcNAc-1-P transferase (GPT) and ...
82-324 5.54e-38

This family includes eukaryotic UDP-GlcNAc:dolichol-P GlcNAc-1-P transferase (GPT) and archaeal GPT-like glycosyltransferases. Eukaryotic GPT catalyzes the transfer of GlcNAc-1-P from UDP-GlcNAc to dolichol-P to form GlcNAc-P-P-dolichol. The reaction is the first step in the assembly of dolichol-linked oligosaccharide intermediates and is essential for eukaryotic N-linked glycosylation. GPT activity has been identified in all eukaryotic cells examined to date. Evidence for the existence of the N-glycosylation pathway in archaea has emerged and genes responsible for the pathway have been identified. A glycosyl transferase gene Mv1751 in M. voltae encodes for the enzyme that carries out the first step in the pathway, the attachment of GlcNAc to a dolichol lipid carrier in the membrane. A lethal mutation in the alg7 (GPT) gene in Saccharomyces cerevisiae was successfully complemented with Mv1751, the archaeal gene, indicating eukaryotic and archaeal enzymes may use the same substrates and are evolutionarily closer than the bacterial enzyme, which uses a different substrate.


Pssm-ID: 133461  Cd Length: 223  Bit Score: 136.47  E-value: 5.54e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624462172  82 GVDLNKISKDKVAEPIGLFPSILYFI--FVLIYQLIYYNDHKILLEYNAGLLSIIFMTFLGFIDDVLELKWRYKVILPFF 159
Cdd:cd06851     2 GKDMNKKGNVMIPEPGGISILIGFVAseITLIFFPFLSFPHFPISEILAALITSVLGFSVGIIDDRLTMGGWFKPVALAF 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624462172 160 ASLPLLLSYSGETNIRIPSFLnfifkeRIINIGFFYYLYIILLSVFCTNAINIYAGINGLEIGQSLIISFFISIHNLtei 239
Cdd:cd06851    82 AAAPILLLGAYDSNLDFPLFG------GSVKIPSLYLVLVVFMIVITGNAFNSIAGLNGVEAGFTTIISFALAISLL--- 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624462172 240 ilnvgnpqieggliLKQHFLSIIFTLPFISINLATFAFNFYPSKGFVGNTLTYFCGIFLAVVSIFGHYSKTLILFLIPQF 319
Cdd:cd06851   153 --------------VQQNYEIGIACLCLAFASLAFLYYNKYPSRIFPGDTGAYMFGATYAVVAILGEVEKIAAVAFIPAI 218

                  ....*
gi 1624462172 320 LNFFL 324
Cdd:cd06851   219 INFFL 223
GT_GPT_archaea cd06856
UDP-GlcNAc:dolichol-P GlcNAc-1-P transferase (GPT)-like proteins in archaea. Eukaryotic GPT ...
81-389 5.83e-32

UDP-GlcNAc:dolichol-P GlcNAc-1-P transferase (GPT)-like proteins in archaea. Eukaryotic GPT catalyzes the transfer of GlcNAc-1-P from UDP-GlcNAc to dolichol-P to form GlcNAc-P-P-dolichol. The reaction is the first step in the assembly of dolichol-linked oligosaccharide intermediates and is essential for eukaryotic N-linked glycosylation. Evidence for the existence of the N-glycosylation pathway in archaea has emerged and genes responsible for the pathway have been identified. A glycosyl transferase gene Mv1751 in M. voltae encodes for the enzyme that carries out the first step in the pathway, the attachment of GlcNAc to a dolichol lipid carrier in the membrane. A lethal mutation in the alg7 (GPT) gene in Saccharomyces cerevisiae was successfully complemented with Mv1751, the archaea gene, indicating that eukaryotic and archaeal enzymes may use the same substrates and are evolutionarily closer than the bacterial enzyme, which uses a different substrate.


Pssm-ID: 133466  Cd Length: 280  Bit Score: 121.97  E-value: 5.83e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624462172  81 YGVDLNKISKDKVAEPIGLfpsILYFIFVLIYQLIYYNDHKIllEYNAGLLSIIFMTFLGFIDDVLELKWRYKVILPFFA 160
Cdd:cd06856     1 VGRDVHKPGKPEVPEMGGI---AVLLGFSLGLLFLSALTHSV--EALALLITSLLAGLIGLLDDILGLSQSEKVLLTALP 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624462172 161 SLPLLLSYSGETNIRIPSFlnfifkeRIINIGFFYYLYIILLSVFCTNAINIYAGINGLEIGQSLIISFFIsihnlteII 240
Cdd:cd06856    76 AIPLLVLKAGNPLTSLPIG-------GRVLGILYYLLIVPLGITGASNAFNMLAGFNGLEAGMGIIILLAL-------AI 141
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624462172 241 LNVGNPQIEGGLILkqhflsiiftLPFISINLATFAFNFYPSKGFVGNTLTYFCGIFLAVVSIFGHYSKTLILFLIPQFL 320
Cdd:cd06856   142 ILLINGDYDALIIA----------LILVAALLAFLLYNKYPAKVFPGDVGTLPIGALIGTIAVLGGLEIILLILLLPYVI 211
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1624462172 321 NFFLSLPQLYNIVPCPRHRLPVINTKTNKLNYSHNYTLINMILYLFGPLSEYHLVIFLLSFQFITCSVG 389
Cdd:cd06856   212 DFLLKLRSKGGGKEHREKPTKVLEDGTLYPPPDKSSLLTLRLLLRKGPMTEKEVVLVLWALEALLGILA 280
Rfe COG0472
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate ...
51-316 2.46e-21

UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase [Cell wall/membrane/envelope biogenesis]; UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase is part of the Pathway/BioSystem: Mureine biosynthesis


Pssm-ID: 440240  Cd Length: 288  Bit Score: 92.88  E-value: 2.46e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624462172  51 LFYILSCLFLFKVTFICLPKFIRFLNEKGLygVDL-NKISKDKVAEP----IGLFPSILyfIFVLIYQLIYYNDHKILLe 125
Cdd:COG0472     1 LRLLLAFLLAFLLSLLLTPLLIRLARRLGL--VDDpNERKSHKRPTPrmggIAIFLGFL--LALLLLALLSNPELLLLL- 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624462172 126 ynaglLSIIFMTFLGFIDDVLELKWRYKVILPFFASLPLLLSYsgetnIRIPSFLNFIFKerIINIGFFYYLYIILLSVF 205
Cdd:COG0472    76 -----LGALLLGLIGFLDDLLGLSARQKLLGQLLAALLLVLLL-----LRITSLTIPFFG--LLDLGWLYIPLTVFWIVG 143
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624462172 206 CTNAINIYAGINGLEIGQSLIISFFISIhnlteIILNVGNPQIegglilkqhflsIIFTLPFISINLATFAFNFYPSKGF 285
Cdd:COG0472   144 VSNAVNLTDGLDGLAAGVSLIAALALAI-----IAYLAGQGEL------------ALLAAALAGALLGFLWFNFPPAKIF 206
                         250       260       270
                  ....*....|....*....|....*....|.
gi 1624462172 286 VGNTLTYFCGIFLAVVSIFGHYSKTLILFLI 316
Cdd:COG0472   207 MGDTGSLFLGFALAALAILGRQEGASLLLLL 237
GT_MraY-like cd06499
Glycosyltransferase 4 (GT4) includes both eukaryotic and prokaryotic UDP-D-N-acetylhexosamine: ...
130-302 2.81e-21

Glycosyltransferase 4 (GT4) includes both eukaryotic and prokaryotic UDP-D-N-acetylhexosamine:polyprenol phosphate D-N-acetylhexosamine-1-phosphate transferases. They catalyze the transfer of a D-N-acetylhexosamine 1-phosphate to a membrane-bound polyprenol phosphate, which is the initiation step of protein N-glycosylation in eukaryotes and peptidoglycan biosynthesis in bacteria. One member, D-N-acetylhexosamine 1-phosphate transferase (GPT) is a eukaryotic enzyme, which is specific for UDP-GlcNAc as donor substrate and dolichol-phosphate as the membrane bound acceptor. The bacterial members MraY, WecA, and WbpL/WbcO utilize undecaprenol phosphate as the acceptor substrate, but use different UDP-sugar donor substrates. MraY-type transferases are highly specific for UDP-N-acetylmuramate-pentapeptide, whereas WecA proteins are selective for UDP-N-acetylglucosamine (UDP-GlcNAc). The WbcO/WbpL substrate specificity has not yet been determined, but the structure of their biosynthetic endproducts implies that UDP-N-acetyl-D-fucosamine (UDP-FucNAc) and/or UDPN-acetyl-D-quinosamine (UDP-QuiNAc) are used. The eukaryotic reaction is the first step in the assembly of dolichol-linked oligosaccharide intermediates and is essential for N-glycosylation. The prokaryotic reactions lead to the formation of polyprenol-linked oligosaccharides involved in bacterial cell wall and peptidoglycan assembly. Archaeal and eukaryotic enzymes may use the same substrates and are evolutionarily closer than the bacterial enzyme. Archaea possess the same N-glycosylation pathway as eukaryotes. A glycosyl transferase gene Mv1751 in M. voltae encodes for the enzyme that carries out the first step in the pathway, the attachment of GlcNAc to a dolichol lipid carrier in the membrane. A lethal mutation in the alg7 (GPT) gene in Saccharomyces cerevisiae was successfully complemented with Mv1751, the archaea gene.


Pssm-ID: 133460  Cd Length: 185  Bit Score: 90.44  E-value: 2.81e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624462172 130 LLSIIFMTFLGFIDDVL----ELKWRYKVILPFFASLPLLLSYSGETnIRIPSFlnfifkERIINIGFFYYLYIILLSVF 205
Cdd:cd06499    33 LLSGLVAGIVGFIDDLLglkvELSEREKLLLQILAALFLLLIGGGHT-TVTTPL------GFVLDLGIFYIPFAIIAIVG 105
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624462172 206 CTNAINIYAGINGLEIGQSLIISFFISIHNLteiilnvgnpqIEGGLIlkqhflSIIFTLPFISINLATFAFNFYPSKGF 285
Cdd:cd06499   106 ATNAVNLIDGMDGLAAGISVIASIACALFAL-----------LSGQTT------SALLFIILAGACLGFLYFNFYPAKIF 168
                         170
                  ....*....|....*..
gi 1624462172 286 VGNTLTYFCGIFLAVVS 302
Cdd:cd06499   169 MGDTGSYFLGAAYAAVA 185
Glycos_transf_4 pfam00953
Glycosyl transferase family 4;
130-305 2.84e-20

Glycosyl transferase family 4;


Pssm-ID: 460008  Cd Length: 158  Bit Score: 86.89  E-value: 2.84e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624462172 130 LLSIIFMTFLGFIDDVLELKWRYKVILPFFASLPLLLSYsgetNIRIPSFLNFiFKERIINIGFFYYLYIILLSVFC-TN 208
Cdd:pfam00953   4 LLGALLIGLIGLIDDLLGLSARIKLLLQALAALILLVLG----GIGLTSLGLP-FGGGSLELGPWLSILLTLFAIVGlTN 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624462172 209 AINIYAGINGLEIGQSLIISFFISIHNLTEiilnvgnpqiegglilkQHFLSIIFTLPFISINLATFAFNFYPSKGFVGN 288
Cdd:pfam00953  79 AVNFIDGLDGLAGGVAIIAALALGIIAYLL-----------------GNLELALLSLALLGALLGFLPFNFYPAKIFMGD 141
                         170
                  ....*....|....*..
gi 1624462172 289 TLTYFCGIFLAVVSIFG 305
Cdd:pfam00953 142 SGSLFLGFLLAVLAIIG 158
GT_WecA_like cd06853
This subfamily contains Escherichia coli WecA, Bacillus subtilis TagO and related proteins. ...
97-317 3.50e-12

This subfamily contains Escherichia coli WecA, Bacillus subtilis TagO and related proteins. WecA is an UDP-N-acetylglucosamine (GlcNAc):undecaprenyl-phosphate (Und-P) GlcNAc-1-phosphate transferase that catalyzes the formation of a phosphodiester bond between a membrane-associated undecaprenyl-phosphate molecule and N-acetylglucosamine 1-phosphate, which is usually donated by a soluble UDP-N-acetylglucosamine precursor. WecA participates in the biosynthesis of O antigen LPS in many enteric bacteria and is also involved in the biosynthesis of enterobacterial common antigen. A conserved short sequence motif and a conserved arginine at a cytosolic loop of this integral membrane protein were shown to be critical in recognition of substrate UDP-N-acetylglucosamine.


Pssm-ID: 133463  Cd Length: 249  Bit Score: 65.97  E-value: 3.50e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624462172  97 IGLFPSILYFIFVLIYQLIyyndhkillEYNAGLLSIIFMTFLGFIDDVLELKWRYKVILPFFASlpLLLSYSGetnIRI 176
Cdd:cd06853    18 LGFLLALLLALLFPFFLLP---------ELLGLLAGATIIVLLGLLDDLFDLSPKVKLLGQILAA--LIVVFGG---GVI 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624462172 177 PSFLNFIFKErIINIGFFYYLYIILLSVFCTNAINIYAGINGLEIGQSLIISFFISIHnlteiilnvgnpqieggLILKQ 256
Cdd:cd06853    84 LSLLGPFGGG-IILLGWLSIPLTVLWIVGIINAINLIDGLDGLAGGVALIASLALAIL-----------------ALLNG 145
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1624462172 257 HFLSIIFTLPFISINLATFAFNFYPSKGFVGNTLTYFCGIFLAVVSIFGH-YSKTLILFLIP 317
Cdd:cd06853   146 QVLVALLALALAGALLGFLPYNFHPARIFMGDAGSLFLGFLLAVLSILGTqKSSTAISPVVP 207
GT_MraY cd06852
Phospho-N-acetylmuramoyl-pentapeptide-transferase (mraY) is an enzyme responsible for the ...
125-316 2.94e-11

Phospho-N-acetylmuramoyl-pentapeptide-transferase (mraY) is an enzyme responsible for the formation of the first lipid intermediate in the synthesis of bacterial cell wall peptidoglycan. It catalyzes the formation of undecaprenyl-pyrophosphoryl-N-acetylmuramoyl-pentapeptide from UDP-MurNAc-pentapeptide and undecaprenyl-phosphate. It is an integral membrane protein with possibly ten transmembrane domains.


Pssm-ID: 133462  Cd Length: 280  Bit Score: 63.66  E-value: 2.94e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624462172 125 EYNAGLLSIIFMTFLGFIDDVLELKW--------RYKVILPFFASLpLLLSYSGETNIRIPSFLNFIFKERIINIGFFYY 196
Cdd:cd06852    37 EVLLLLLLTLGFGLIGFLDDYLKVVKkrnlglsaRQKLLLQFLIAI-VFALLLYYFNGSGTLITLPFFKNGLIDLGILYI 115
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624462172 197 LYIILLSVFCTNAINIYAGINGLEIGQSLIISFFISIhnlteIILNVGNPQIEGglilkqhflsiIFTLPFISINLATFA 276
Cdd:cd06852   116 PFAIFVIVGSSNAVNLTDGLDGLAAGVSIIVALALAI-----IAYLAGNAVFLA-----------VFCAALVGACLGFLW 179
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1624462172 277 FNFYPSKGFVGNTLTYFCGIFLAVVSIFghySKTLILFLI 316
Cdd:cd06852   180 FNAYPAKVFMGDTGSLALGGALAALAIL---TKQELLLLI 216
GT_MraY_like cd06912
This subfamily is composed of uncharacterized bacterial glycosyltransferases in the MraY-like ...
130-302 5.31e-03

This subfamily is composed of uncharacterized bacterial glycosyltransferases in the MraY-like family. This family contains both eukaryotic and prokaryotic UDP-D-N-acetylhexosamine:polyprenol phosphate D-N-acetylhexosamine-1-phosphate transferases, which catalyze the transfer of a D-N-acetylhexosamine 1-phosphate to a membrane-bound polyprenol phosphate. This is the initiation step of protein N-glycosylation in eukaryotes and peptidoglycan biosynthesis in bacteria. The three bacterial members MraY, WecA, and WbpL/WbcO, utilize undecaprenol phosphate as the acceptor substrate, but use different UDP-sugar donor substrates. MraY-type transferases are highly specific for UDP-N-acetylmuramate-pentapeptide, whereas WecA proteins are selective for UDP-N-acetylglucosamine (UDP-GlcNAc). The WbcO/WbpL substrate specificity has not yet been determined, but the structure of their biosynthetic end products implies that UDP-N-acetyl-D-fucosamine (UDP-FucNAc) and/or UDPN-acetyl-D-quinosamine (UDP-QuiNAc) are used. The prokaryotic enzyme-catalyzed reactions lead to the formation of polyprenol-linked oligosaccharides involved in bacterial cell wall and peptidoglycan assembly.


Pssm-ID: 133467  Cd Length: 193  Bit Score: 37.61  E-value: 5.31e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624462172 130 LLSIIFMTFLGFIDDvLELKWRYKVILPFFASLPLLLSYSGETNIripSFLNFIFKERIINIGFFYYLYIILLSVFCTNA 209
Cdd:cd06912    42 LLAALPAFLAGLLED-ITKRVSPRIRLLATFLSALLAVWLLGASI---TRLDLPGLDLLLSFPPFAIIFTIFAVAGVANA 117
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624462172 210 INIYAGINGLEIGQSLIISFFISihnltEIILNVGNPQIegglilkqHFLSIIFTLPFISInlatFAFNFYPSKGFVGNT 289
Cdd:cd06912   118 FNIIDGFNGLASGVAIISLLSLA-----LVAFQVGDTDL--------AFLALLLAGALLGF----LIFNFPFGKIFLGDG 180
                         170
                  ....*....|...
gi 1624462172 290 LTYFCGIFLAVVS 302
Cdd:cd06912   181 GAYLLGFLLAWLA 193
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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