NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1034560239|ref|XP_016857305|]
View 

transmembrane protein 234 isoform X1 [Homo sapiens]

Protein Classification

TMEM234 domain-containing protein( domain architecture ID 10566314)

TMEM234 domain-containing protein

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
TMEM234 pfam10639
Putative transmembrane family 234; TMEM234 is a family of putative inner membrane proteins. ...
 18-126 1.68e-47

Putative transmembrane family 234; TMEM234 is a family of putative inner membrane proteins. Many bacterial members are annotated as putative L-Ara4N-phosphoundecaprenol flippase subunit ArnE, and as inner membrane proteins. They may be transporters of the multi-drug-resistant superfamily.


:

Pssm-ID: 371174  Cd Length: 113  Bit Score: 150.13  E-value: 1.68e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034560239  18 WGGTQPLLKRASAGLQRVHEPTwaqQLLQEMKTLFLNTEYLMPFLLNQCGSLLYYLTLASTDLTLAVPICNSLAIIFTLI 97
Cdd:pfam10639   8 WGITNPLLKRGSKGLENVKSPL---QFLLEFKFLFLRWKYLIPFLLNQSGSVVFFYTLGSTDLSLAVPIANSLSFVFTVL 84

                          90       100
                  ....*....|....*....|....*....
gi 1034560239  98 VGKALGEDIGGKRAVAGMVLTVIGISLCI 126
Cdd:pfam10639  85 TGWLLGEKVLGKKTYLGMGLVVAGTALCV 113
 
Name Accession Description Interval E-value
TMEM234 pfam10639
Putative transmembrane family 234; TMEM234 is a family of putative inner membrane proteins. ...
 18-126 1.68e-47

Putative transmembrane family 234; TMEM234 is a family of putative inner membrane proteins. Many bacterial members are annotated as putative L-Ara4N-phosphoundecaprenol flippase subunit ArnE, and as inner membrane proteins. They may be transporters of the multi-drug-resistant superfamily.


Pssm-ID: 371174  Cd Length: 113  Bit Score: 150.13  E-value: 1.68e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034560239  18 WGGTQPLLKRASAGLQRVHEPTwaqQLLQEMKTLFLNTEYLMPFLLNQCGSLLYYLTLASTDLTLAVPICNSLAIIFTLI 97
Cdd:pfam10639   8 WGITNPLLKRGSKGLENVKSPL---QFLLEFKFLFLRWKYLIPFLLNQSGSVVFFYTLGSTDLSLAVPIANSLSFVFTVL 84

                          90       100
                  ....*....|....*....|....*....
gi 1034560239  98 VGKALGEDIGGKRAVAGMVLTVIGISLCI 126
Cdd:pfam10639  85 TGWLLGEKVLGKKTYLGMGLVVAGTALCV 113
 
Name Accession Description Interval E-value
TMEM234 pfam10639
Putative transmembrane family 234; TMEM234 is a family of putative inner membrane proteins. ...
 18-126 1.68e-47

Putative transmembrane family 234; TMEM234 is a family of putative inner membrane proteins. Many bacterial members are annotated as putative L-Ara4N-phosphoundecaprenol flippase subunit ArnE, and as inner membrane proteins. They may be transporters of the multi-drug-resistant superfamily.


Pssm-ID: 371174  Cd Length: 113  Bit Score: 150.13  E-value: 1.68e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034560239  18 WGGTQPLLKRASAGLQRVHEPTwaqQLLQEMKTLFLNTEYLMPFLLNQCGSLLYYLTLASTDLTLAVPICNSLAIIFTLI 97
Cdd:pfam10639   8 WGITNPLLKRGSKGLENVKSPL---QFLLEFKFLFLRWKYLIPFLLNQSGSVVFFYTLGSTDLSLAVPIANSLSFVFTVL 84

                          90       100
                  ....*....|....*....|....*....
gi 1034560239  98 VGKALGEDIGGKRAVAGMVLTVIGISLCI 126
Cdd:pfam10639  85 TGWLLGEKVLGKKTYLGMGLVVAGTALCV 113
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH