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Conserved domains on  [gi|847172836|ref|XP_012809624|]
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gastrula zinc finger protein XlCGF26.1-like isoform X3 [Xenopus tropicalis]

Protein Classification

C2H2-type zinc finger protein( domain architecture ID 11473154)

Cys2His2 (C2H2)-type zinc finger protein may be involved in transcriptional regulation

CATH:  3.30.160.60
Gene Ontology:  GO:0008270|GO:0003677
PubMed:  11361095|22803940|11179890|12665246|10940247
SCOP:  4003583

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
68-452 1.20e-12

FOG: Zn-finger [General function prediction only];


:

Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 70.49  E-value: 1.20e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847172836  68 KLYSCTECGKRFSLFPSLVTHIRIHAGEKPFTCIECGKTFNRKD------HLRMHQKLHRE--------QKQFTC----A 129
Cdd:COG5048   32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYSGCDKSFSRplelsrHLRTHHNNPSDlnskslplSNSKASssslS 111

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847172836 130 ICAERFVSERKLQTHQAIHMEKNLFTCTECGKSFSKKSSLRVHHRIHTGEK-------PFTCRECGKSFSSTHSLRMHER 202
Cdd:COG5048  112 SSSSNSNDNNLLSSHSLPPSSRDPQLPDLLSISNLRNNPLPGNNSSSVNTPqsnslhpPLPANSLSKDPSSNLSLLISSN 191

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847172836 203 IHTGEKPFTCAKCGRSFVEKGRL-TRHEMTHKNKPYVCSECDRKFPDMEKLRLHQAVHIQNKCSNCKVCGKCFSHERFLK 281
Cdd:COG5048  192 VSTSIPSSSENSPLSSSYSIPSSsSDQNLENSSSSLPLTTNSQLSPKSLLSQSPSSLSSSDSSSSASESPRSSLPTASSQ 271

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847172836 282 KHERIHTAE-------KPFSCTECWKTFTEKSRLLIHQR--IHTGE--KPFFCTE--CGKSFIEKRILQIHQRCHTGEKP 348
Cdd:COG5048  272 SSSPNESDSssekgfsLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPYslCGKLFSRNDALKRHILLHTSISP 351

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847172836 349 FTC-------TKCGKGFNEKRTLRVHEIIHTRKRPFIC--KECGKSFSAKSTFHVHKRFHTRKKP--FTCPECGKSFTAK 417
Cdd:COG5048  352 AKEkllnsssKFSPLLNNEPPQSLQQYKDLKNDKKSETlsNSCIRNFKRDSNLSLHIITHLSFRPynCKNPPCSKSFNRH 431

                        410       420       430
                 ....*....|....*....|....*....|....*
gi 847172836 418 RTLLIHERTHTGEKPFACIECGKCFTAKTGLNRHQ 452
Cdd:COG5048  432 YNLIPHKKIHTNHAPLLCSILKSFRRDLDLSNHGK 466
zf-H2C2_2 pfam13465
Zinc-finger double domain;
588-612 3.00e-04

Zinc-finger double domain;


:

Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 38.51  E-value: 3.00e-04
                          10        20
                  ....*....|....*....|....*
gi 847172836  588 LRRHERTHTGEKPYTCTECGKSFTT 612
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
560-583 4.45e-04

Zinc-finger double domain;


:

Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 37.74  E-value: 4.45e-04
                          10        20
                  ....*....|....*....|....
gi 847172836  560 LRRHERTHTGEKPFKCSKCGKSFT 583
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFK 25
SFP1 super family cl25788
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 485-568 2.06e-03

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


The actual alignment was detected with superfamily member COG5189:

Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 41.24  E-value: 2.06e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847172836 485 EEKPFTCRGDGKNVT-ENSSLCKHERIHTEEKPFTcrgdgknvTENSSLCKHERIHTGEKPFTCSECGKRYTEKFQLRRH 563
Cdd:COG5189  346 DGKPYKCPVEGCNKKyKNQNGLKYHMLHGHQNQKL--------HENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYH 417


                 ....*
gi 847172836 564 eRTHT 568
Cdd:COG5189  418 -RKHS 421
zf-H2C2_2 pfam13465
Zinc-finger double domain;
448-472 6.12e-03

Zinc-finger double domain;


:

Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 34.65  E-value: 6.12e-03
                          10        20
                  ....*....|....*....|....*
gi 847172836  448 LNRHQKVHTGEKPFTCKKCGKCFTR 472
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
 
Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
68-452 1.20e-12

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 70.49  E-value: 1.20e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847172836  68 KLYSCTECGKRFSLFPSLVTHIRIHAGEKPFTCIECGKTFNRKD------HLRMHQKLHRE--------QKQFTC----A 129
Cdd:COG5048   32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYSGCDKSFSRplelsrHLRTHHNNPSDlnskslplSNSKASssslS 111

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847172836 130 ICAERFVSERKLQTHQAIHMEKNLFTCTECGKSFSKKSSLRVHHRIHTGEK-------PFTCRECGKSFSSTHSLRMHER 202
Cdd:COG5048  112 SSSSNSNDNNLLSSHSLPPSSRDPQLPDLLSISNLRNNPLPGNNSSSVNTPqsnslhpPLPANSLSKDPSSNLSLLISSN 191

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847172836 203 IHTGEKPFTCAKCGRSFVEKGRL-TRHEMTHKNKPYVCSECDRKFPDMEKLRLHQAVHIQNKCSNCKVCGKCFSHERFLK 281
Cdd:COG5048  192 VSTSIPSSSENSPLSSSYSIPSSsSDQNLENSSSSLPLTTNSQLSPKSLLSQSPSSLSSSDSSSSASESPRSSLPTASSQ 271

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847172836 282 KHERIHTAE-------KPFSCTECWKTFTEKSRLLIHQR--IHTGE--KPFFCTE--CGKSFIEKRILQIHQRCHTGEKP 348
Cdd:COG5048  272 SSSPNESDSssekgfsLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPYslCGKLFSRNDALKRHILLHTSISP 351

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847172836 349 FTC-------TKCGKGFNEKRTLRVHEIIHTRKRPFIC--KECGKSFSAKSTFHVHKRFHTRKKP--FTCPECGKSFTAK 417
Cdd:COG5048  352 AKEkllnsssKFSPLLNNEPPQSLQQYKDLKNDKKSETlsNSCIRNFKRDSNLSLHIITHLSFRPynCKNPPCSKSFNRH 431

                        410       420       430
                 ....*....|....*....|....*....|....*
gi 847172836 418 RTLLIHERTHTGEKPFACIECGKCFTAKTGLNRHQ 452
Cdd:COG5048  432 YNLIPHKKIHTNHAPLLCSILKSFRRDLDLSNHGK 466
zf-H2C2_2 pfam13465
Zinc-finger double domain;
588-612 3.00e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 38.51  E-value: 3.00e-04
                          10        20
                  ....*....|....*....|....*
gi 847172836  588 LRRHERTHTGEKPYTCTECGKSFTT 612
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
560-583 4.45e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 37.74  E-value: 4.45e-04
                          10        20
                  ....*....|....*....|....
gi 847172836  560 LRRHERTHTGEKPFKCSKCGKSFT 583
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFK 25
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 485-568 2.06e-03

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 41.24  E-value: 2.06e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847172836 485 EEKPFTCRGDGKNVT-ENSSLCKHERIHTEEKPFTcrgdgknvTENSSLCKHERIHTGEKPFTCSECGKRYTEKFQLRRH 563
Cdd:COG5189  346 DGKPYKCPVEGCNKKyKNQNGLKYHMLHGHQNQKL--------HENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYH 417


                 ....*
gi 847172836 564 eRTHT 568
Cdd:COG5189  418 -RKHS 421
transpos_ISL3 NF033550
ISL3 family transposase;
341-401 3.50e-03

ISL3 family transposase;


Pssm-ID: 468079 [Multi-domain]  Cd Length: 369  Bit Score: 40.26  E-value: 3.50e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 847172836 341 RCHTGEKPFTCTKCGKG-----FNEKRTLRvHE-------IIHTRKRPFICKECGKSFSAKSTFHVHKRFHTR 401
Cdd:NF033550   3 EAELTRGDATCPECGKPsrrvhDTGKRRIR-HLpifgrpvYLELRVRRFKCPECGKTFTEELPWARKRSRITL 74
zf-H2C2_2 pfam13465
Zinc-finger double domain;
168-193 3.97e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.04  E-value: 3.97e-03
                          10        20
                  ....*....|....*....|....*.
gi 847172836  168 SLRVHHRIHTGEKPFTCRECGKSFSS 193
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
448-472 6.12e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 34.65  E-value: 6.12e-03
                          10        20
                  ....*....|....*....|....*
gi 847172836  448 LNRHQKVHTGEKPFTCKKCGKCFTR 472
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
 
Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
68-452 1.20e-12

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 70.49  E-value: 1.20e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847172836  68 KLYSCTECGKRFSLFPSLVTHIRIHAGEKPFTCIECGKTFNRKD------HLRMHQKLHRE--------QKQFTC----A 129
Cdd:COG5048   32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYSGCDKSFSRplelsrHLRTHHNNPSDlnskslplSNSKASssslS 111

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847172836 130 ICAERFVSERKLQTHQAIHMEKNLFTCTECGKSFSKKSSLRVHHRIHTGEK-------PFTCRECGKSFSSTHSLRMHER 202
Cdd:COG5048  112 SSSSNSNDNNLLSSHSLPPSSRDPQLPDLLSISNLRNNPLPGNNSSSVNTPqsnslhpPLPANSLSKDPSSNLSLLISSN 191

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847172836 203 IHTGEKPFTCAKCGRSFVEKGRL-TRHEMTHKNKPYVCSECDRKFPDMEKLRLHQAVHIQNKCSNCKVCGKCFSHERFLK 281
Cdd:COG5048  192 VSTSIPSSSENSPLSSSYSIPSSsSDQNLENSSSSLPLTTNSQLSPKSLLSQSPSSLSSSDSSSSASESPRSSLPTASSQ 271

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847172836 282 KHERIHTAE-------KPFSCTECWKTFTEKSRLLIHQR--IHTGE--KPFFCTE--CGKSFIEKRILQIHQRCHTGEKP 348
Cdd:COG5048  272 SSSPNESDSssekgfsLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPYslCGKLFSRNDALKRHILLHTSISP 351

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847172836 349 FTC-------TKCGKGFNEKRTLRVHEIIHTRKRPFIC--KECGKSFSAKSTFHVHKRFHTRKKP--FTCPECGKSFTAK 417
Cdd:COG5048  352 AKEkllnsssKFSPLLNNEPPQSLQQYKDLKNDKKSETlsNSCIRNFKRDSNLSLHIITHLSFRPynCKNPPCSKSFNRH 431

                        410       420       430
                 ....*....|....*....|....*....|....*
gi 847172836 418 RTLLIHERTHTGEKPFACIECGKCFTAKTGLNRHQ 452
Cdd:COG5048  432 YNLIPHKKIHTNHAPLLCSILKSFRRDLDLSNHGK 466
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
137-582 1.29e-10

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 63.95  E-value: 1.29e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847172836 137 SERKLQTHQAIHMEKNLFTCTECGKSFSKKSSLRVHHRIHTGEKPFTCR--ECGKSFSSTHSLRMHERIHTGEKPFTCAK 214
Cdd:COG5048   17 SSTPKSTLKSLSNAPRPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSysGCDKSFSRPLELSRHLRTHHNNPSDLNSK 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847172836 215 CGRSFVEKGRLTRHEMTHKNKPYVCSECDRKFPDMEKLRLHQAVHiqnkcSNCKVcGKCFSHERFLKKHERIHTAEKPFS 294
Cdd:COG5048   97 SLPLSNSKASSSSLSSSSSNSNDNNLLSSHSLPPSSRDPQLPDLL-----SISNL-RNNPLPGNNSSSVNTPQSNSLHPP 170

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847172836 295 CT--ECWKTFTEKSRLLIHQRIHTGEKPFFCTECGKSFIEKRILQIHQRCHTGEKPFTCTKCGKGFNEKRTLrvheiiht 372
Cdd:COG5048  171 LPanSLSKDPSSNLSLLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLS-------- 242

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847172836 373 rkrpfickeCGKSFSAKSTFHVHKrfhtrKKPFTCPECGKSFTAKRTLLIHERTHTG-EKPFACIECGKCFTAKTGLNRH 451
Cdd:COG5048  243 ---------QSPSSLSSSDSSSSA-----SESPRSSLPTASSQSSSPNESDSSSEKGfSLPIKSKQCNISFSRSSPLTRH 308

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847172836 452 Q--KVHTGE--KPFTCKK--CGKCFTRKENLKMHQNIHTEEKPFTC--RGDGKNVTENSSLCKHERIH-----TEEKPFT 518
Cdd:COG5048  309 LrsVNHSGEslKPFSCPYslCGKLFSRNDALKRHILLHTSISPAKEklLNSSSKFSPLLNNEPPQSLQqykdlKNDKKSE 388

                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 847172836 519 C--RGDGKNVTENSSLCKHERIHTGEKP--FTCSECGKRYTEKFQLRRHERTHTGEKPFKCSKCGKSF 582
Cdd:COG5048  389 TlsNSCIRNFKRDSNLSLHIITHLSFRPynCKNPPCSKSFNRHYNLIPHKKIHTNHAPLLCSILKSFR 456
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
247-667 1.36e-10

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 63.95  E-value: 1.36e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847172836 247 PDMEKLRLHQAVHIQNKCSNCKVCGKCFSHERFLKKHERIHTAEKPFSCT--ECWKTFTEKSRLLIHQRIHTGEKPffct 324
Cdd:COG5048   16 LSSTPKSTLKSLSNAPRPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSysGCDKSFSRPLELSRHLRTHHNNPS---- 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847172836 325 ecgksfiekrILQIHQRCHTGEKPFTC--TKCGKGFNEKRTLRVHEIIHTRKRPFICKECGKSFSAKSTFHVHKRFHTRK 402
Cdd:COG5048   92 ----------DLNSKSLPLSNSKASSSslSSSSSNSNDNNLLSSHSLPPSSRDPQLPDLLSISNLRNNPLPGNNSSSVNT 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847172836 403 K-------PFTCPECGKSFTAKRTLLIHERTHTGEKPFACIECGKCFTAKTGLNRHQKVHTGEKPFTCKKCGKCFTRKEN 475
Cdd:COG5048  162 PqsnslhpPLPANSLSKDPSSNLSLLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLL 241

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847172836 476 LKMHQNIHTEEKPFTCRGDGKNVTENSSLCKHERIHTEE-------KPFTCRGDGKNVTENSSLCKHER--IHTGE--KP 544
Cdd:COG5048  242 SQSPSSLSSSDSSSSASESPRSSLPTASSQSSSPNESDSssekgfsLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKP 321

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847172836 545 FTCSE--CGKRYTEKFQLRRHERTHTGEKPFKC-------SKCGKSFTEKFQLRRHERTHTGEKPYTCT--ECGKSFTTK 613
Cdd:COG5048  322 FSCPYslCGKLFSRNDALKRHILLHTSISPAKEkllnsssKFSPLLNNEPPQSLQQYKDLKNDKKSETLsnSCIRNFKRD 401

                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 847172836 614 SILKRHHSAHNGEKP--FTCTECGKGFVSLYNLDVHKATHTgrNHSPVQNDEKGSF 667
Cdd:COG5048  402 SNLSLHIITHLSFRPynCKNPPCSKSFNRHYNLIPHKKIHT--NHAPLLCSILKSF 455
zf-H2C2_2 pfam13465
Zinc-finger double domain;
588-612 3.00e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 38.51  E-value: 3.00e-04
                          10        20
                  ....*....|....*....|....*
gi 847172836  588 LRRHERTHTGEKPYTCTECGKSFTT 612
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
560-583 4.45e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 37.74  E-value: 4.45e-04
                          10        20
                  ....*....|....*....|....
gi 847172836  560 LRRHERTHTGEKPFKCSKCGKSFT 583
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFK 25
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 541-623 1.52e-03

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 41.63  E-value: 1.52e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847172836 541 GEKPFTCS--ECGKRYTEKFQLRRHeRTHtgekpfkcSKCGKSFTEKFQLRRHERTHTGEKPYTCTECGKSFTTKSILKR 618
Cdd:COG5189  346 DGKPYKCPveGCNKKYKNQNGLKYH-MLH--------GHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKY 416


                 ....*..
gi 847172836 619 H--HSAH 623
Cdd:COG5189  417 HrkHSHD 423
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 485-568 2.06e-03

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 41.24  E-value: 2.06e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847172836 485 EEKPFTCRGDGKNVT-ENSSLCKHERIHTEEKPFTcrgdgknvTENSSLCKHERIHTGEKPFTCSECGKRYTEKFQLRRH 563
Cdd:COG5189  346 DGKPYKCPVEGCNKKyKNQNGLKYHMLHGHQNQKL--------HENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYH 417


                 ....*
gi 847172836 564 eRTHT 568
Cdd:COG5189  418 -RKHS 421
transpos_ISL3 NF033550
ISL3 family transposase;
341-401 3.50e-03

ISL3 family transposase;


Pssm-ID: 468079 [Multi-domain]  Cd Length: 369  Bit Score: 40.26  E-value: 3.50e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 847172836 341 RCHTGEKPFTCTKCGKG-----FNEKRTLRvHE-------IIHTRKRPFICKECGKSFSAKSTFHVHKRFHTR 401
Cdd:NF033550   3 EAELTRGDATCPECGKPsrrvhDTGKRRIR-HLpifgrpvYLELRVRRFKCPECGKTFTEELPWARKRSRITL 74
zf-H2C2_2 pfam13465
Zinc-finger double domain;
168-193 3.97e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.04  E-value: 3.97e-03
                          10        20
                  ....*....|....*....|....*.
gi 847172836  168 SLRVHHRIHTGEKPFTCRECGKSFSS 193
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
448-472 6.12e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 34.65  E-value: 6.12e-03
                          10        20
                  ....*....|....*....|....*
gi 847172836  448 LNRHQKVHTGEKPFTCKKCGKCFTR 472
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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