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Conserved domains on  [gi|795586117|ref|XP_011913073|]
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PREDICTED: GTPase IMAP family member 8 [Cercocebus atys]

Protein Classification

GTPase IMAP family protein( domain architecture ID 10111261)

GTPase immunity-associated protein (IMAP) family protein may function as regulator of lymphocyte survival and homeostasis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
AIG1 cd01852
AvrRpt2-Induced Gene 1 (AIG1); This group represents Arabidoposis protein AIG1 ...
 439-645 3.27e-83

AvrRpt2-Induced Gene 1 (AIG1); This group represents Arabidoposis protein AIG1 (avrRpt2-induced gene 1) that appears to be involved in plant resistance to bacteria. The Arabidopsis disease resistance gene RPS2 is involved in recognition of bacterial pathogens carrying the avirulence gene avrRpt2. AIG1 exhibits RPS2- and avrRpt1-dependent induction early after infection with Pseudomonas syringae carrying avrRpt2. This subfamily also includes IAN-4 protein, which has GTP-binding activity and shares sequence homology with a novel family of putative GTP-binding proteins: the immuno-associated nucleotide (IAN) family. The evolutionary conservation of the IAN family provides a unique example of a plant pathogen response gene conserved in animals. The IAN/IMAP subfamily has been proposed to regulate apoptosis in vertebrates and angiosperm plants, particularly in relation to cancer, diabetes, and infections. The human IAN genes were renamed GIMAP (GTPase of the immunity associated proteins).


:

Pssm-ID: 206651 [Multi-domain]  Cd Length: 201  Bit Score: 260.55  E-value: 3.27e-83
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117 439 LSIVLVGRSGTGKSATGNSILGSLIFTSQLRAQPVTKTSQSGRRTWDGQEVVVVDTPSFNQMlnvEKDPSQLEEEVKRCL 518
Cdd:cd01852    1 LRLVLVGKTGNGKSATGNTILGRKVFESKLSASGVTKTCQKESAVWDGRRVNVIDTPGLFDT---SVSPEQLSKEIIRCL 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117 519 SCCEKGDTFFVLVFQLGRFTEEDKTAVAQLEAIFGADFMKYTIVLFTRKEDLGTGKLEDFIGNSDnKALKNIIKKCERRY 598
Cdd:cd01852   78 SLSAPGPHAFLLVVPLGRFTEEEEQAVEELQELFGEKVLDHTIVLFTRGDDLEGGSLEDYLEDSC-EALKRLLEKCGGRY 156

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*..
gi 795586117 599 CAFNNKETGQAQETQVKALLTMVNNLRKKsgWSGYPHTQENVSKLTK 645
Cdd:cd01852  157 VAFNNKAKGREQEQQVKELLAKVEEMVRE--NGGKPYTNEMYEEAEE 201
AIG1 cd01852
AvrRpt2-Induced Gene 1 (AIG1); This group represents Arabidoposis protein AIG1 ...
 11-207 4.66e-79

AvrRpt2-Induced Gene 1 (AIG1); This group represents Arabidoposis protein AIG1 (avrRpt2-induced gene 1) that appears to be involved in plant resistance to bacteria. The Arabidopsis disease resistance gene RPS2 is involved in recognition of bacterial pathogens carrying the avirulence gene avrRpt2. AIG1 exhibits RPS2- and avrRpt1-dependent induction early after infection with Pseudomonas syringae carrying avrRpt2. This subfamily also includes IAN-4 protein, which has GTP-binding activity and shares sequence homology with a novel family of putative GTP-binding proteins: the immuno-associated nucleotide (IAN) family. The evolutionary conservation of the IAN family provides a unique example of a plant pathogen response gene conserved in animals. The IAN/IMAP subfamily has been proposed to regulate apoptosis in vertebrates and angiosperm plants, particularly in relation to cancer, diabetes, and infections. The human IAN genes were renamed GIMAP (GTPase of the immunity associated proteins).


:

Pssm-ID: 206651 [Multi-domain]  Cd Length: 201  Bit Score: 249.76  E-value: 4.66e-79
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117  11 LRLLLLGKCRSGKSATGNAILGKDVFKSKFSDQIVTKMCQRESQVLRERKIVVIDTPDLFSSIACAEDKQRNIQRCLELS 90
Cdd:cd01852    1 LRLVLVGKTGNGKSATGNTILGRKVFESKLSASGVTKTCQKESAVWDGRRVNVIDTPGLFDTSVSPEQLSKEIIRCLSLS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117  91 APSLHALLLVIAIGHFTREDEETVTSIQQVFGAEARRHIIIVFTRKDDLGDDLLQDFIENN-KSLKQLVQDCEGRYCIFN 169
Cdd:cd01852   81 APGPHAFLLVVPLGRFTEEEEQAVEELQELFGEKVLDHTIVLFTRGDDLEGGSLEDYLEDScEALKRLLEKCGGRYVAFN 160

                        170       180       190
                 ....*....|....*....|....*....|....*....
gi 795586117 170 NKANsKDERITQVSDLLCKVECLVNMNGG-PYRVNFKTE 207
Cdd:cd01852  161 NKAK-GREQEQQVKELLAKVEEMVRENGGkPYTNEMYEE 198
AIG1 cd01852
AvrRpt2-Induced Gene 1 (AIG1); This group represents Arabidoposis protein AIG1 ...
 248-441 2.20e-78

AvrRpt2-Induced Gene 1 (AIG1); This group represents Arabidoposis protein AIG1 (avrRpt2-induced gene 1) that appears to be involved in plant resistance to bacteria. The Arabidopsis disease resistance gene RPS2 is involved in recognition of bacterial pathogens carrying the avirulence gene avrRpt2. AIG1 exhibits RPS2- and avrRpt1-dependent induction early after infection with Pseudomonas syringae carrying avrRpt2. This subfamily also includes IAN-4 protein, which has GTP-binding activity and shares sequence homology with a novel family of putative GTP-binding proteins: the immuno-associated nucleotide (IAN) family. The evolutionary conservation of the IAN family provides a unique example of a plant pathogen response gene conserved in animals. The IAN/IMAP subfamily has been proposed to regulate apoptosis in vertebrates and angiosperm plants, particularly in relation to cancer, diabetes, and infections. The human IAN genes were renamed GIMAP (GTPase of the immunity associated proteins).


:

Pssm-ID: 206651 [Multi-domain]  Cd Length: 201  Bit Score: 248.22  E-value: 2.20e-78
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117 248 LTVLLVGKRGAGKSAAGNSILGRRAFQTGFSERSVTQSFSSESRSWRKKKVLIIDTPDISTLKNIGSEVRKHI------- 320
Cdd:cd01852    1 LRLVLVGKTGNGKSATGNTILGRKVFESKLSASGVTKTCQKESAVWDGRRVNVIDTPGLFDTSVSPEQLSKEIirclsls 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117 321 CTGPHAFLLVTPLGFYTKNDEAVLNTIQSSFGEKFFEYMVILFTRKEDLGDQDLDTVLRRSSETPHSLIQKCKNRYIAFN 400
Cdd:cd01852   81 APGPHAFLLVVPLGRFTEEEEQAVEELQELFGEKVLDHTIVLFTRGDDLEGGSLEDYLEDSCEALKRLLEKCGGRYVAFN 160

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|.
gi 795586117 401 YRATGEEEQRQVDELLEKIESMVHQNGNKHCVFREKETLSI 441
Cdd:cd01852  161 NKAKGREQEQQVKELLAKVEEMVRENGGKPYTNEMYEEAEE 201
 
Name Accession Description Interval E-value
AIG1 cd01852
AvrRpt2-Induced Gene 1 (AIG1); This group represents Arabidoposis protein AIG1 ...
 439-645 3.27e-83

AvrRpt2-Induced Gene 1 (AIG1); This group represents Arabidoposis protein AIG1 (avrRpt2-induced gene 1) that appears to be involved in plant resistance to bacteria. The Arabidopsis disease resistance gene RPS2 is involved in recognition of bacterial pathogens carrying the avirulence gene avrRpt2. AIG1 exhibits RPS2- and avrRpt1-dependent induction early after infection with Pseudomonas syringae carrying avrRpt2. This subfamily also includes IAN-4 protein, which has GTP-binding activity and shares sequence homology with a novel family of putative GTP-binding proteins: the immuno-associated nucleotide (IAN) family. The evolutionary conservation of the IAN family provides a unique example of a plant pathogen response gene conserved in animals. The IAN/IMAP subfamily has been proposed to regulate apoptosis in vertebrates and angiosperm plants, particularly in relation to cancer, diabetes, and infections. The human IAN genes were renamed GIMAP (GTPase of the immunity associated proteins).


Pssm-ID: 206651 [Multi-domain]  Cd Length: 201  Bit Score: 260.55  E-value: 3.27e-83
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117 439 LSIVLVGRSGTGKSATGNSILGSLIFTSQLRAQPVTKTSQSGRRTWDGQEVVVVDTPSFNQMlnvEKDPSQLEEEVKRCL 518
Cdd:cd01852    1 LRLVLVGKTGNGKSATGNTILGRKVFESKLSASGVTKTCQKESAVWDGRRVNVIDTPGLFDT---SVSPEQLSKEIIRCL 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117 519 SCCEKGDTFFVLVFQLGRFTEEDKTAVAQLEAIFGADFMKYTIVLFTRKEDLGTGKLEDFIGNSDnKALKNIIKKCERRY 598
Cdd:cd01852   78 SLSAPGPHAFLLVVPLGRFTEEEEQAVEELQELFGEKVLDHTIVLFTRGDDLEGGSLEDYLEDSC-EALKRLLEKCGGRY 156

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*..
gi 795586117 599 CAFNNKETGQAQETQVKALLTMVNNLRKKsgWSGYPHTQENVSKLTK 645
Cdd:cd01852  157 VAFNNKAKGREQEQQVKELLAKVEEMVRE--NGGKPYTNEMYEEAEE 201
AIG1 cd01852
AvrRpt2-Induced Gene 1 (AIG1); This group represents Arabidoposis protein AIG1 ...
 11-207 4.66e-79

AvrRpt2-Induced Gene 1 (AIG1); This group represents Arabidoposis protein AIG1 (avrRpt2-induced gene 1) that appears to be involved in plant resistance to bacteria. The Arabidopsis disease resistance gene RPS2 is involved in recognition of bacterial pathogens carrying the avirulence gene avrRpt2. AIG1 exhibits RPS2- and avrRpt1-dependent induction early after infection with Pseudomonas syringae carrying avrRpt2. This subfamily also includes IAN-4 protein, which has GTP-binding activity and shares sequence homology with a novel family of putative GTP-binding proteins: the immuno-associated nucleotide (IAN) family. The evolutionary conservation of the IAN family provides a unique example of a plant pathogen response gene conserved in animals. The IAN/IMAP subfamily has been proposed to regulate apoptosis in vertebrates and angiosperm plants, particularly in relation to cancer, diabetes, and infections. The human IAN genes were renamed GIMAP (GTPase of the immunity associated proteins).


Pssm-ID: 206651 [Multi-domain]  Cd Length: 201  Bit Score: 249.76  E-value: 4.66e-79
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117  11 LRLLLLGKCRSGKSATGNAILGKDVFKSKFSDQIVTKMCQRESQVLRERKIVVIDTPDLFSSIACAEDKQRNIQRCLELS 90
Cdd:cd01852    1 LRLVLVGKTGNGKSATGNTILGRKVFESKLSASGVTKTCQKESAVWDGRRVNVIDTPGLFDTSVSPEQLSKEIIRCLSLS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117  91 APSLHALLLVIAIGHFTREDEETVTSIQQVFGAEARRHIIIVFTRKDDLGDDLLQDFIENN-KSLKQLVQDCEGRYCIFN 169
Cdd:cd01852   81 APGPHAFLLVVPLGRFTEEEEQAVEELQELFGEKVLDHTIVLFTRGDDLEGGSLEDYLEDScEALKRLLEKCGGRYVAFN 160

                        170       180       190
                 ....*....|....*....|....*....|....*....
gi 795586117 170 NKANsKDERITQVSDLLCKVECLVNMNGG-PYRVNFKTE 207
Cdd:cd01852  161 NKAK-GREQEQQVKELLAKVEEMVRENGGkPYTNEMYEE 198
AIG1 cd01852
AvrRpt2-Induced Gene 1 (AIG1); This group represents Arabidoposis protein AIG1 ...
 248-441 2.20e-78

AvrRpt2-Induced Gene 1 (AIG1); This group represents Arabidoposis protein AIG1 (avrRpt2-induced gene 1) that appears to be involved in plant resistance to bacteria. The Arabidopsis disease resistance gene RPS2 is involved in recognition of bacterial pathogens carrying the avirulence gene avrRpt2. AIG1 exhibits RPS2- and avrRpt1-dependent induction early after infection with Pseudomonas syringae carrying avrRpt2. This subfamily also includes IAN-4 protein, which has GTP-binding activity and shares sequence homology with a novel family of putative GTP-binding proteins: the immuno-associated nucleotide (IAN) family. The evolutionary conservation of the IAN family provides a unique example of a plant pathogen response gene conserved in animals. The IAN/IMAP subfamily has been proposed to regulate apoptosis in vertebrates and angiosperm plants, particularly in relation to cancer, diabetes, and infections. The human IAN genes were renamed GIMAP (GTPase of the immunity associated proteins).


Pssm-ID: 206651 [Multi-domain]  Cd Length: 201  Bit Score: 248.22  E-value: 2.20e-78
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117 248 LTVLLVGKRGAGKSAAGNSILGRRAFQTGFSERSVTQSFSSESRSWRKKKVLIIDTPDISTLKNIGSEVRKHI------- 320
Cdd:cd01852    1 LRLVLVGKTGNGKSATGNTILGRKVFESKLSASGVTKTCQKESAVWDGRRVNVIDTPGLFDTSVSPEQLSKEIirclsls 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117 321 CTGPHAFLLVTPLGFYTKNDEAVLNTIQSSFGEKFFEYMVILFTRKEDLGDQDLDTVLRRSSETPHSLIQKCKNRYIAFN 400
Cdd:cd01852   81 APGPHAFLLVVPLGRFTEEEEQAVEELQELFGEKVLDHTIVLFTRGDDLEGGSLEDYLEDSCEALKRLLEKCGGRYVAFN 160

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|.
gi 795586117 401 YRATGEEEQRQVDELLEKIESMVHQNGNKHCVFREKETLSI 441
Cdd:cd01852  161 NKAKGREQEQQVKELLAKVEEMVRENGGKPYTNEMYEEAEE 201
AIG1 pfam04548
AIG1 family; Arabidopsis protein AIG1 appears to be involved in plant resistance to bacteria.
 439-653 7.06e-74

AIG1 family; Arabidopsis protein AIG1 appears to be involved in plant resistance to bacteria.


Pssm-ID: 398307 [Multi-domain]  Cd Length: 200  Bit Score: 236.35  E-value: 7.06e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117  439 LSIVLVGRSGTGKSATGNSILGSLIFTSQLRAQPVTKTSQSGRRTWDGQEVVVVDTPSfnqMLNVEKDPSQLEEEVKRCL 518
Cdd:pfam04548   1 LRIVLVGKTGNGKSATGNSILGRKAFESKLRAQGVTKTCQLVSRTWDGRIINVIDTPG---LFDLSVSNDFISKEIIRCL 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117  519 SCCEKGDTFFVLVFQLGRFTEEDKTAVAQLEAIFGADFMKYTIVLFTRKEDLGTGKLEDFIGNSDNKALKNIIKkcerry 598
Cdd:pfam04548  78 LLAEPGPHAVLLVLSLGRFTEEEEQALRTLQELFGSKILDYMIVVFTRKDDLEDDSLDDYLSDGCPEFLKEVLR------ 151

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 795586117  599 cafnnKETGQAQETQVKALLTMVNNLRKKSGwsGYPHTQEnVSKLTKNVQEMSQA 653
Cdd:pfam04548 152 -----TADGEEKEEQVQQLLALVEAIVKENG--GKPYTND-LYEKIKEEGERLRE 198
AIG1 pfam04548
AIG1 family; Arabidopsis protein AIG1 appears to be involved in plant resistance to bacteria.
 11-215 2.40e-67

AIG1 family; Arabidopsis protein AIG1 appears to be involved in plant resistance to bacteria.


Pssm-ID: 398307 [Multi-domain]  Cd Length: 200  Bit Score: 219.02  E-value: 2.40e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117   11 LRLLLLGKCRSGKSATGNAILGKDVFKSKFSDQIVTKMCQRESQVLRERKIVVIDTPDLFSSIACAEDKQRNIQRCLELS 90
Cdd:pfam04548   1 LRIVLVGKTGNGKSATGNSILGRKAFESKLRAQGVTKTCQLVSRTWDGRIINVIDTPGLFDLSVSNDFISKEIIRCLLLA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117   91 APSLHALLLVIAIGHFTREDEETVTSIQQVFGAEARRHIIIVFTRKDDLGDDLLQDFIEN--NKSLKQLVQdcegrycif 168
Cdd:pfam04548  81 EPGPHAVLLVLSLGRFTEEEEQALRTLQELFGSKILDYMIVVFTRKDDLEDDSLDDYLSDgcPEFLKEVLR--------- 151

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 795586117  169 nnkANSKDERITQVSDLLCKVECLVNMNGGPYRVN-----FKTEGSRFQDCV 215
Cdd:pfam04548 152 ---TADGEEKEEQVQQLLALVEAIVKENGGKPYTNdlyekIKEEGERLREQQ 200
AIG1 pfam04548
AIG1 family; Arabidopsis protein AIG1 appears to be involved in plant resistance to bacteria.
 248-430 4.18e-67

AIG1 family; Arabidopsis protein AIG1 appears to be involved in plant resistance to bacteria.


Pssm-ID: 398307 [Multi-domain]  Cd Length: 200  Bit Score: 218.25  E-value: 4.18e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117  248 LTVLLVGKRGAGKSAAGNSILGRRAFQTGFSERSVTQSFSSESRSWRKKKVLIIDTPDISTLKNIGSEVRKHI------- 320
Cdd:pfam04548   1 LRIVLVGKTGNGKSATGNSILGRKAFESKLRAQGVTKTCQLVSRTWDGRIINVIDTPGLFDLSVSNDFISKEIircllla 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117  321 CTGPHAFLLVTPLGFYTKNDEAVLNTIQSSFGEKFFEYMVILFTRKEDLGDQDLDTVLRRSSETP-HSLIQKcknryiaf 399
Cdd:pfam04548  81 EPGPHAVLLVLSLGRFTEEEEQALRTLQELFGSKILDYMIVVFTRKDDLEDDSLDDYLSDGCPEFlKEVLRT-------- 152

                         170       180       190
                  ....*....|....*....|....*....|.
gi 795586117  400 nyrATGEEEQRQVDELLEKIESMVHQNGNKH 430
Cdd:pfam04548 153 ---ADGEEKEEQVQQLLALVEAIVKENGGKP 180
YeeP COG3596
Predicted GTPase [General function prediction only];
10-134 1.38e-06

Predicted GTPase [General function prediction only];


Pssm-ID: 442815 [Multi-domain]  Cd Length: 318  Bit Score: 50.53  E-value: 1.38e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117  10 ELRLLLLGKCRSGKSATGNAILGKDVFKSKfsdqiVTKMCQRESQVLR-----ERKIVVIDTPDLFSSIAcAEDKQRNIQ 84
Cdd:COG3596   39 PPVIALVGKTGAGKSSLINALFGAEVAEVG-----VGRPCTREIQRYRlesdgLPGLVLLDTPGLGEVNE-RDREYRELR 112

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 795586117  85 RCLelsaPSLHALLLVIAIG-HFTREDEETVTSIQQVFgaeARRHIIIVFT 134
Cdd:COG3596  113 ELL----PEADLILWVVKADdRALATDEEFLQALRAQY---PDPPVLVVLT 156
3a0901s04IAP86 TIGR00993
chloroplast protein import component Toc86/159, G and M domains; The long precursor of the 86K ...
 438-517 2.13e-06

chloroplast protein import component Toc86/159, G and M domains; The long precursor of the 86K protein originally described is proposed to have three domains. The N-terminal A-domain is acidic, repetitive, weakly conserved, readily removed by proteolysis during chloroplast isolation, and not required for protein translocation. The other domains are designated G (GTPase) and M (membrane anchor); this family includes most of the G domain and all of M. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273381 [Multi-domain]  Cd Length: 763  Bit Score: 51.11  E-value: 2.13e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117  438 TLSIVLVGRSGTGKSATGNSILGSLIFTSQlRAQPVTKTSQSGRRTWDGQEVVVVDTP-----SFNQMLNvEKDPSQLEE 512
Cdd:TIGR00993 118 SLNILVLGKSGVGKSATINSIFGEVKFSTD-AFGMGTTSVQEIEGLVQGVKIRVIDTPglkssASDQSKN-EKILSSVKK 195


                  ....*
gi 795586117  513 EVKRC 517
Cdd:TIGR00993 196 FIKKN 200
3a0901s04IAP86 TIGR00993
chloroplast protein import component Toc86/159, G and M domains; The long precursor of the 86K ...
 233-364 7.97e-06

chloroplast protein import component Toc86/159, G and M domains; The long precursor of the 86K protein originally described is proposed to have three domains. The N-terminal A-domain is acidic, repetitive, weakly conserved, readily removed by proteolysis during chloroplast isolation, and not required for protein translocation. The other domains are designated G (GTPase) and M (membrane anchor); this family includes most of the G domain and all of M. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273381 [Multi-domain]  Cd Length: 763  Bit Score: 49.18  E-value: 7.97e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117  233 QLQSTGPEqDLGTSeLTVLLVGKRGAGKSAAGNSILGRRAFQT---GFSERSVTQSfsseSRSWRKKKVLIIDTP----- 304
Cdd:TIGR00993 106 QLEAEGQD-PLDFS-LNILVLGKSGVGKSATINSIFGEVKFSTdafGMGTTSVQEI----EGLVQGVKIRVIDTPglkss 179

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 795586117  305 --DISTLKNIGSEVRKHICTGPHAFLL-VTPLGFYTK--NDEAVLNTIQSSFGEKFFEYMVILFT 364
Cdd:TIGR00993 180 asDQSKNEKILSSVKKFIKKNPPDIVLyVDRLDMQTRdsNDLPLLRTITDVLGPSIWFNAIVTLT 244
YeeP COG3596
Predicted GTPase [General function prediction only];
409-517 2.25e-05

Predicted GTPase [General function prediction only];


Pssm-ID: 442815 [Multi-domain]  Cd Length: 318  Bit Score: 47.07  E-value: 2.25e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117 409 QRQVDELLEKIESMVhqngnkhcvfREKETLSIVLVGRSGTGKSATGNSILGS-LIFTSQLRaqPVTKTSQSGR-RTWDG 486
Cdd:COG3596   20 QVLRELLAEALERLL----------VELPPPVIALVGKTGAGKSSLINALFGAeVAEVGVGR--PCTREIQRYRlESDGL 87

                         90       100       110
                 ....*....|....*....|....*....|.
gi 795586117 487 QEVVVVDTPSFNQMLNVEKDPSQLEEEVKRC 517
Cdd:COG3596   88 PGLVLLDTPGLGEVNERDREYRELRELLPEA 118
3a0901s04IAP86 TIGR00993
chloroplast protein import component Toc86/159, G and M domains; The long precursor of the 86K ...
 11-134 2.12e-04

chloroplast protein import component Toc86/159, G and M domains; The long precursor of the 86K protein originally described is proposed to have three domains. The N-terminal A-domain is acidic, repetitive, weakly conserved, readily removed by proteolysis during chloroplast isolation, and not required for protein translocation. The other domains are designated G (GTPase) and M (membrane anchor); this family includes most of the G domain and all of M. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273381 [Multi-domain]  Cd Length: 763  Bit Score: 44.56  E-value: 2.12e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117   11 LRLLLLGKCRSGKSATGNAILGKDVFkSKFSDQIVTKMCQRESQVLRERKIVVIDTPDLFSSiacAEDKQRN------IQ 84
Cdd:TIGR00993 119 LNILVLGKSGVGKSATINSIFGEVKF-STDAFGMGTTSVQEIEGLVQGVKIRVIDTPGLKSS---ASDQSKNekilssVK 194

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 795586117   85 RCLELSAPSLhaLLLVIAIGHFTRE--DEETVTSIQQVFGAEARRHIIIVFT 134
Cdd:TIGR00993 195 KFIKKNPPDI--VLYVDRLDMQTRDsnDLPLLRTITDVLGPSIWFNAIVTLT 244
YeeP COG3596
Predicted GTPase [General function prediction only];
230-349 1.71e-03

Predicted GTPase [General function prediction only];


Pssm-ID: 442815 [Multi-domain]  Cd Length: 318  Bit Score: 40.90  E-value: 1.71e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117 230 RERQLQSTGPEQDLGTSELTVLLVGKRGAGKSAAGNSILGRRAFQTGFSERS--VTQSFSSESRSWRkkKVLIIDTPDIS 307
Cdd:COG3596   22 LRELLAEALERLLVELPPPVIALVGKTGAGKSSLINALFGAEVAEVGVGRPCtrEIQRYRLESDGLP--GLVLLDTPGLG 99

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 795586117 308 TLKN---IGSEVRKHICTgPHAFLLVT-PLGFYTKNDEAVLNTIQS 349
Cdd:COG3596  100 EVNErdrEYRELRELLPE-ADLILWVVkADDRALATDEEFLQALRA 144
 
Name Accession Description Interval E-value
AIG1 cd01852
AvrRpt2-Induced Gene 1 (AIG1); This group represents Arabidoposis protein AIG1 ...
 439-645 3.27e-83

AvrRpt2-Induced Gene 1 (AIG1); This group represents Arabidoposis protein AIG1 (avrRpt2-induced gene 1) that appears to be involved in plant resistance to bacteria. The Arabidopsis disease resistance gene RPS2 is involved in recognition of bacterial pathogens carrying the avirulence gene avrRpt2. AIG1 exhibits RPS2- and avrRpt1-dependent induction early after infection with Pseudomonas syringae carrying avrRpt2. This subfamily also includes IAN-4 protein, which has GTP-binding activity and shares sequence homology with a novel family of putative GTP-binding proteins: the immuno-associated nucleotide (IAN) family. The evolutionary conservation of the IAN family provides a unique example of a plant pathogen response gene conserved in animals. The IAN/IMAP subfamily has been proposed to regulate apoptosis in vertebrates and angiosperm plants, particularly in relation to cancer, diabetes, and infections. The human IAN genes were renamed GIMAP (GTPase of the immunity associated proteins).


Pssm-ID: 206651 [Multi-domain]  Cd Length: 201  Bit Score: 260.55  E-value: 3.27e-83
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117 439 LSIVLVGRSGTGKSATGNSILGSLIFTSQLRAQPVTKTSQSGRRTWDGQEVVVVDTPSFNQMlnvEKDPSQLEEEVKRCL 518
Cdd:cd01852    1 LRLVLVGKTGNGKSATGNTILGRKVFESKLSASGVTKTCQKESAVWDGRRVNVIDTPGLFDT---SVSPEQLSKEIIRCL 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117 519 SCCEKGDTFFVLVFQLGRFTEEDKTAVAQLEAIFGADFMKYTIVLFTRKEDLGTGKLEDFIGNSDnKALKNIIKKCERRY 598
Cdd:cd01852   78 SLSAPGPHAFLLVVPLGRFTEEEEQAVEELQELFGEKVLDHTIVLFTRGDDLEGGSLEDYLEDSC-EALKRLLEKCGGRY 156

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*..
gi 795586117 599 CAFNNKETGQAQETQVKALLTMVNNLRKKsgWSGYPHTQENVSKLTK 645
Cdd:cd01852  157 VAFNNKAKGREQEQQVKELLAKVEEMVRE--NGGKPYTNEMYEEAEE 201
AIG1 cd01852
AvrRpt2-Induced Gene 1 (AIG1); This group represents Arabidoposis protein AIG1 ...
 11-207 4.66e-79

AvrRpt2-Induced Gene 1 (AIG1); This group represents Arabidoposis protein AIG1 (avrRpt2-induced gene 1) that appears to be involved in plant resistance to bacteria. The Arabidopsis disease resistance gene RPS2 is involved in recognition of bacterial pathogens carrying the avirulence gene avrRpt2. AIG1 exhibits RPS2- and avrRpt1-dependent induction early after infection with Pseudomonas syringae carrying avrRpt2. This subfamily also includes IAN-4 protein, which has GTP-binding activity and shares sequence homology with a novel family of putative GTP-binding proteins: the immuno-associated nucleotide (IAN) family. The evolutionary conservation of the IAN family provides a unique example of a plant pathogen response gene conserved in animals. The IAN/IMAP subfamily has been proposed to regulate apoptosis in vertebrates and angiosperm plants, particularly in relation to cancer, diabetes, and infections. The human IAN genes were renamed GIMAP (GTPase of the immunity associated proteins).


Pssm-ID: 206651 [Multi-domain]  Cd Length: 201  Bit Score: 249.76  E-value: 4.66e-79
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117  11 LRLLLLGKCRSGKSATGNAILGKDVFKSKFSDQIVTKMCQRESQVLRERKIVVIDTPDLFSSIACAEDKQRNIQRCLELS 90
Cdd:cd01852    1 LRLVLVGKTGNGKSATGNTILGRKVFESKLSASGVTKTCQKESAVWDGRRVNVIDTPGLFDTSVSPEQLSKEIIRCLSLS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117  91 APSLHALLLVIAIGHFTREDEETVTSIQQVFGAEARRHIIIVFTRKDDLGDDLLQDFIENN-KSLKQLVQDCEGRYCIFN 169
Cdd:cd01852   81 APGPHAFLLVVPLGRFTEEEEQAVEELQELFGEKVLDHTIVLFTRGDDLEGGSLEDYLEDScEALKRLLEKCGGRYVAFN 160

                        170       180       190
                 ....*....|....*....|....*....|....*....
gi 795586117 170 NKANsKDERITQVSDLLCKVECLVNMNGG-PYRVNFKTE 207
Cdd:cd01852  161 NKAK-GREQEQQVKELLAKVEEMVRENGGkPYTNEMYEE 198
AIG1 cd01852
AvrRpt2-Induced Gene 1 (AIG1); This group represents Arabidoposis protein AIG1 ...
 248-441 2.20e-78

AvrRpt2-Induced Gene 1 (AIG1); This group represents Arabidoposis protein AIG1 (avrRpt2-induced gene 1) that appears to be involved in plant resistance to bacteria. The Arabidopsis disease resistance gene RPS2 is involved in recognition of bacterial pathogens carrying the avirulence gene avrRpt2. AIG1 exhibits RPS2- and avrRpt1-dependent induction early after infection with Pseudomonas syringae carrying avrRpt2. This subfamily also includes IAN-4 protein, which has GTP-binding activity and shares sequence homology with a novel family of putative GTP-binding proteins: the immuno-associated nucleotide (IAN) family. The evolutionary conservation of the IAN family provides a unique example of a plant pathogen response gene conserved in animals. The IAN/IMAP subfamily has been proposed to regulate apoptosis in vertebrates and angiosperm plants, particularly in relation to cancer, diabetes, and infections. The human IAN genes were renamed GIMAP (GTPase of the immunity associated proteins).


Pssm-ID: 206651 [Multi-domain]  Cd Length: 201  Bit Score: 248.22  E-value: 2.20e-78
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117 248 LTVLLVGKRGAGKSAAGNSILGRRAFQTGFSERSVTQSFSSESRSWRKKKVLIIDTPDISTLKNIGSEVRKHI------- 320
Cdd:cd01852    1 LRLVLVGKTGNGKSATGNTILGRKVFESKLSASGVTKTCQKESAVWDGRRVNVIDTPGLFDTSVSPEQLSKEIirclsls 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117 321 CTGPHAFLLVTPLGFYTKNDEAVLNTIQSSFGEKFFEYMVILFTRKEDLGDQDLDTVLRRSSETPHSLIQKCKNRYIAFN 400
Cdd:cd01852   81 APGPHAFLLVVPLGRFTEEEEQAVEELQELFGEKVLDHTIVLFTRGDDLEGGSLEDYLEDSCEALKRLLEKCGGRYVAFN 160

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|.
gi 795586117 401 YRATGEEEQRQVDELLEKIESMVHQNGNKHCVFREKETLSI 441
Cdd:cd01852  161 NKAKGREQEQQVKELLAKVEEMVRENGGKPYTNEMYEEAEE 201
AIG1 pfam04548
AIG1 family; Arabidopsis protein AIG1 appears to be involved in plant resistance to bacteria.
 439-653 7.06e-74

AIG1 family; Arabidopsis protein AIG1 appears to be involved in plant resistance to bacteria.


Pssm-ID: 398307 [Multi-domain]  Cd Length: 200  Bit Score: 236.35  E-value: 7.06e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117  439 LSIVLVGRSGTGKSATGNSILGSLIFTSQLRAQPVTKTSQSGRRTWDGQEVVVVDTPSfnqMLNVEKDPSQLEEEVKRCL 518
Cdd:pfam04548   1 LRIVLVGKTGNGKSATGNSILGRKAFESKLRAQGVTKTCQLVSRTWDGRIINVIDTPG---LFDLSVSNDFISKEIIRCL 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117  519 SCCEKGDTFFVLVFQLGRFTEEDKTAVAQLEAIFGADFMKYTIVLFTRKEDLGTGKLEDFIGNSDNKALKNIIKkcerry 598
Cdd:pfam04548  78 LLAEPGPHAVLLVLSLGRFTEEEEQALRTLQELFGSKILDYMIVVFTRKDDLEDDSLDDYLSDGCPEFLKEVLR------ 151

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 795586117  599 cafnnKETGQAQETQVKALLTMVNNLRKKSGwsGYPHTQEnVSKLTKNVQEMSQA 653
Cdd:pfam04548 152 -----TADGEEKEEQVQQLLALVEAIVKENG--GKPYTND-LYEKIKEEGERLRE 198
AIG1 pfam04548
AIG1 family; Arabidopsis protein AIG1 appears to be involved in plant resistance to bacteria.
 11-215 2.40e-67

AIG1 family; Arabidopsis protein AIG1 appears to be involved in plant resistance to bacteria.


Pssm-ID: 398307 [Multi-domain]  Cd Length: 200  Bit Score: 219.02  E-value: 2.40e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117   11 LRLLLLGKCRSGKSATGNAILGKDVFKSKFSDQIVTKMCQRESQVLRERKIVVIDTPDLFSSIACAEDKQRNIQRCLELS 90
Cdd:pfam04548   1 LRIVLVGKTGNGKSATGNSILGRKAFESKLRAQGVTKTCQLVSRTWDGRIINVIDTPGLFDLSVSNDFISKEIIRCLLLA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117   91 APSLHALLLVIAIGHFTREDEETVTSIQQVFGAEARRHIIIVFTRKDDLGDDLLQDFIEN--NKSLKQLVQdcegrycif 168
Cdd:pfam04548  81 EPGPHAVLLVLSLGRFTEEEEQALRTLQELFGSKILDYMIVVFTRKDDLEDDSLDDYLSDgcPEFLKEVLR--------- 151

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 795586117  169 nnkANSKDERITQVSDLLCKVECLVNMNGGPYRVN-----FKTEGSRFQDCV 215
Cdd:pfam04548 152 ---TADGEEKEEQVQQLLALVEAIVKENGGKPYTNdlyekIKEEGERLREQQ 200
AIG1 pfam04548
AIG1 family; Arabidopsis protein AIG1 appears to be involved in plant resistance to bacteria.
 248-430 4.18e-67

AIG1 family; Arabidopsis protein AIG1 appears to be involved in plant resistance to bacteria.


Pssm-ID: 398307 [Multi-domain]  Cd Length: 200  Bit Score: 218.25  E-value: 4.18e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117  248 LTVLLVGKRGAGKSAAGNSILGRRAFQTGFSERSVTQSFSSESRSWRKKKVLIIDTPDISTLKNIGSEVRKHI------- 320
Cdd:pfam04548   1 LRIVLVGKTGNGKSATGNSILGRKAFESKLRAQGVTKTCQLVSRTWDGRIINVIDTPGLFDLSVSNDFISKEIircllla 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117  321 CTGPHAFLLVTPLGFYTKNDEAVLNTIQSSFGEKFFEYMVILFTRKEDLGDQDLDTVLRRSSETP-HSLIQKcknryiaf 399
Cdd:pfam04548  81 EPGPHAVLLVLSLGRFTEEEEQALRTLQELFGSKILDYMIVVFTRKDDLEDDSLDDYLSDGCPEFlKEVLRT-------- 152

                         170       180       190
                  ....*....|....*....|....*....|.
gi 795586117  400 nyrATGEEEQRQVDELLEKIESMVHQNGNKH 430
Cdd:pfam04548 153 ---ADGEEKEEQVQQLLALVEAIVKENGGKP 180
Toc34_like cd01853
Translocon at the Outer-envelope membrane of Chloroplasts 34-like (Toc34-like); The Toc34-like ...
 231-364 1.21e-11

Translocon at the Outer-envelope membrane of Chloroplasts 34-like (Toc34-like); The Toc34-like (Translocon at the Outer-envelope membrane of Chloroplasts) family contains several Toc proteins, including Toc34, Toc33, Toc120, Toc159, Toc86, Toc125, and Toc90. The Toc complex at the outer envelope membrane of chloroplasts is a molecular machine of ~500 kDa that contains a single Toc159 protein, four Toc75 molecules, and four or five copies of Toc34. Toc64 and Toc12 are associated with the translocon, but do not appear to be part of the core complex. The Toc translocon initiates the import of nuclear-encoded preproteins from the cytosol into the organelle. Toc34 and Toc159 are both GTPases, while Toc75 is a beta-barrel integral membrane protein. Toc159 is equally distributed between a soluble cytoplasmic form and a membrane-inserted form, suggesting that assembly of the Toc complex is dynamic. Toc34 and Toc75 act sequentially to mediate docking and insertion of Toc159 resulting in assembly of the functional translocon.


Pssm-ID: 206652  Cd Length: 248  Bit Score: 65.42  E-value: 1.21e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117 231 ERQLQSTGPEQDlgTSELTVLLVGKRGAGKSAAGNSILGRRAFQTGfSERSVTQSFSSESRSWRKKKVLIIDTP------ 304
Cdd:cd01853   17 LHELEAKLKKEL--DFSLTILVLGKTGVGKSSTINSIFGERKVSVS-AFQSETLRPREVSRTVDGFKLNIIDTPgllesq 93

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 795586117 305 DISTLKNIGSEVRKHI--CTgPHAFLLVTPLGFYT--KNDEAVLNTIQSSFGEKFFEYMVILFT 364
Cdd:cd01853   94 DQRVNRKILSIIKRFLkkKT-IDVVLYVDRLDMYRvdNLDVPLLRAITDSFGPSIWRNAIVVLT 156
Toc34_like cd01853
Translocon at the Outer-envelope membrane of Chloroplasts 34-like (Toc34-like); The Toc34-like ...
 407-565 2.37e-09

Translocon at the Outer-envelope membrane of Chloroplasts 34-like (Toc34-like); The Toc34-like (Translocon at the Outer-envelope membrane of Chloroplasts) family contains several Toc proteins, including Toc34, Toc33, Toc120, Toc159, Toc86, Toc125, and Toc90. The Toc complex at the outer envelope membrane of chloroplasts is a molecular machine of ~500 kDa that contains a single Toc159 protein, four Toc75 molecules, and four or five copies of Toc34. Toc64 and Toc12 are associated with the translocon, but do not appear to be part of the core complex. The Toc translocon initiates the import of nuclear-encoded preproteins from the cytosol into the organelle. Toc34 and Toc159 are both GTPases, while Toc75 is a beta-barrel integral membrane protein. Toc159 is equally distributed between a soluble cytoplasmic form and a membrane-inserted form, suggesting that assembly of the Toc complex is dynamic. Toc34 and Toc75 act sequentially to mediate docking and insertion of Toc159 resulting in assembly of the functional translocon.


Pssm-ID: 206652  Cd Length: 248  Bit Score: 58.48  E-value: 2.37e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117 407 EEQRQVDELLEKIESMVHQ---NGNKHCVFrekeTLSIVLVGRSGTGKSATGNSILGsliftsqlraQPVTKTS--QSG- 480
Cdd:cd01853    1 REWVGFQFFPDATQTKLHEleaKLKKELDF----SLTILVLGKTGVGKSSTINSIFG----------ERKVSVSafQSEt 66

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117 481 ------RRTWDGQEVVVVDTPSFNQMLNVEKDpSQLEEEVKRCLSCCEKGDTFFVLVFQLGRFTEEDKTAVAQLEAIFGA 554
Cdd:cd01853   67 lrprevSRTVDGFKLNIIDTPGLLESQDQRVN-RKILSIIKRFLKKKTIDVVLYVDRLDMYRVDNLDVPLLRAITDSFGP 145

                        170
                 ....*....|.
gi 795586117 555 DFMKYTIVLFT 565
Cdd:cd01853  146 SIWRNAIVVLT 156
Ras_like_GTPase cd00882
Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like ...
 251-419 1.19e-07

Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase superfamily. The Ras-like superfamily of small GTPases consists of several families with an extremely high degree of structural and functional similarity. The Ras superfamily is divided into at least four families in eukaryotes: the Ras, Rho, Rab, and Sar1/Arf families. This superfamily also includes proteins like the GTP translation factors, Era-like GTPases, and G-alpha chain of the heterotrimeric G proteins. Members of the Ras superfamily regulate a wide variety of cellular functions: the Ras family regulates gene expression, the Rho family regulates cytoskeletal reorganization and gene expression, the Rab and Sar1/Arf families regulate vesicle trafficking, and the Ran family regulates nucleocytoplasmic transport and microtubule organization. The GTP translation factor family regulates initiation, elongation, termination, and release in translation, and the Era-like GTPase family regulates cell division, sporulation, and DNA replication. Members of the Ras superfamily are identified by the GTP binding site, which is made up of five characteristic sequence motifs, and the switch I and switch II regions.


Pssm-ID: 206648 [Multi-domain]  Cd Length: 161  Bit Score: 51.69  E-value: 1.19e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117 251 LLVGKRGAGKSAAGNSILGRRAFQTGfSERSVTQSFSSESRSWRKK--KVLIIDTPDISTLKNIGSEVR-KHICTGPHAF 327
Cdd:cd00882    1 VVVGRGGVGKSSLLNALLGGEVGEVS-DVPGTTRDPDVYVKELDKGkvKLVLVDTPGLDEFGGLGREELaRLLLRGADLI 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117 328 LLVTPLGFYTKNDEAVLNTIQSSFGEKffEYMVILFTrKEDLGDQDLDTVLRRSSEtphsLIQKCKNRYIAFNyrATgee 407
Cdd:cd00882   80 LLVVDSTDRESEEDAKLLILRRLRKEG--IPIILVGN-KIDLLEEREVEELLRLEE----LAKILGVPVFEVS--AK--- 147

                        170
                 ....*....|..
gi 795586117 408 EQRQVDELLEKI 419
Cdd:cd00882  148 TGEGVDELFEKL 159
Toc34_like cd01853
Translocon at the Outer-envelope membrane of Chloroplasts 34-like (Toc34-like); The Toc34-like ...
 10-134 2.54e-07

Translocon at the Outer-envelope membrane of Chloroplasts 34-like (Toc34-like); The Toc34-like (Translocon at the Outer-envelope membrane of Chloroplasts) family contains several Toc proteins, including Toc34, Toc33, Toc120, Toc159, Toc86, Toc125, and Toc90. The Toc complex at the outer envelope membrane of chloroplasts is a molecular machine of ~500 kDa that contains a single Toc159 protein, four Toc75 molecules, and four or five copies of Toc34. Toc64 and Toc12 are associated with the translocon, but do not appear to be part of the core complex. The Toc translocon initiates the import of nuclear-encoded preproteins from the cytosol into the organelle. Toc34 and Toc159 are both GTPases, while Toc75 is a beta-barrel integral membrane protein. Toc159 is equally distributed between a soluble cytoplasmic form and a membrane-inserted form, suggesting that assembly of the Toc complex is dynamic. Toc34 and Toc75 act sequentially to mediate docking and insertion of Toc159 resulting in assembly of the functional translocon.


Pssm-ID: 206652  Cd Length: 248  Bit Score: 52.32  E-value: 2.54e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117  10 ELRLLLLGKCRSGKSATGNAILGKDVFK-SKFsdQIVTKMCQRESQVLRERKIVVIDTPDLFSSIACAEDKQ--RNIQRC 86
Cdd:cd01853   31 SLTILVLGKTGVGKSSTINSIFGERKVSvSAF--QSETLRPREVSRTVDGFKLNIIDTPGLLESQDQRVNRKilSIIKRF 108

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 795586117  87 LELSAPslHALLLVIAIGHFTRE--DEETVTSIQQVFGAEARRHIIIVFT 134
Cdd:cd01853  109 LKKKTI--DVVLYVDRLDMYRVDnlDVPLLRAITDSFGPSIWRNAIVVLT 156
YeeP COG3596
Predicted GTPase [General function prediction only];
10-134 1.38e-06

Predicted GTPase [General function prediction only];


Pssm-ID: 442815 [Multi-domain]  Cd Length: 318  Bit Score: 50.53  E-value: 1.38e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117  10 ELRLLLLGKCRSGKSATGNAILGKDVFKSKfsdqiVTKMCQRESQVLR-----ERKIVVIDTPDLFSSIAcAEDKQRNIQ 84
Cdd:COG3596   39 PPVIALVGKTGAGKSSLINALFGAEVAEVG-----VGRPCTREIQRYRlesdgLPGLVLLDTPGLGEVNE-RDREYRELR 112

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 795586117  85 RCLelsaPSLHALLLVIAIG-HFTREDEETVTSIQQVFgaeARRHIIIVFT 134
Cdd:COG3596  113 ELL----PEADLILWVVKADdRALATDEEFLQALRAQY---PDPPVLVVLT 156
3a0901s04IAP86 TIGR00993
chloroplast protein import component Toc86/159, G and M domains; The long precursor of the 86K ...
 438-517 2.13e-06

chloroplast protein import component Toc86/159, G and M domains; The long precursor of the 86K protein originally described is proposed to have three domains. The N-terminal A-domain is acidic, repetitive, weakly conserved, readily removed by proteolysis during chloroplast isolation, and not required for protein translocation. The other domains are designated G (GTPase) and M (membrane anchor); this family includes most of the G domain and all of M. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273381 [Multi-domain]  Cd Length: 763  Bit Score: 51.11  E-value: 2.13e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117  438 TLSIVLVGRSGTGKSATGNSILGSLIFTSQlRAQPVTKTSQSGRRTWDGQEVVVVDTP-----SFNQMLNvEKDPSQLEE 512
Cdd:TIGR00993 118 SLNILVLGKSGVGKSATINSIFGEVKFSTD-AFGMGTTSVQEIEGLVQGVKIRVIDTPglkssASDQSKN-EKILSSVKK 195


                  ....*
gi 795586117  513 EVKRC 517
Cdd:TIGR00993 196 FIKKN 200
MMR_HSR1 pfam01926
50S ribosome-binding GTPase; The full-length GTPase protein is required for the complete ...
 441-495 3.40e-06

50S ribosome-binding GTPase; The full-length GTPase protein is required for the complete activity of the protein of interacting with the 50S ribosome and binding of both adenine and guanine nucleotides, with a preference for guanine nucleotide.


Pssm-ID: 460387 [Multi-domain]  Cd Length: 113  Bit Score: 46.46  E-value: 3.40e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 795586117  441 IVLVGRSGTGKSATGNSILGSLIFTSqlrAQP-VTKTSQSGRRTWDGQEVVVVDTP 495
Cdd:pfam01926   2 VALVGRPNVGKSTLINALTGAKAIVS---DYPgTTRDPNEGRLELKGKQIILVDTP 54
Ras_like_GTPase cd00882
Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like ...
 442-605 5.82e-06

Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase superfamily. The Ras-like superfamily of small GTPases consists of several families with an extremely high degree of structural and functional similarity. The Ras superfamily is divided into at least four families in eukaryotes: the Ras, Rho, Rab, and Sar1/Arf families. This superfamily also includes proteins like the GTP translation factors, Era-like GTPases, and G-alpha chain of the heterotrimeric G proteins. Members of the Ras superfamily regulate a wide variety of cellular functions: the Ras family regulates gene expression, the Rho family regulates cytoskeletal reorganization and gene expression, the Rab and Sar1/Arf families regulate vesicle trafficking, and the Ran family regulates nucleocytoplasmic transport and microtubule organization. The GTP translation factor family regulates initiation, elongation, termination, and release in translation, and the Era-like GTPase family regulates cell division, sporulation, and DNA replication. Members of the Ras superfamily are identified by the GTP binding site, which is made up of five characteristic sequence motifs, and the switch I and switch II regions.


Pssm-ID: 206648 [Multi-domain]  Cd Length: 161  Bit Score: 46.68  E-value: 5.82e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117 442 VLVGRSGTGKSATGNSILGSlIFTSQLRAQPVTKTSQSGRRTWDGQE--VVVVDTPSFnqmlnVEKDPSQLEEEVKRCLS 519
Cdd:cd00882    1 VVVGRGGVGKSSLLNALLGG-EVGEVSDVPGTTRDPDVYVKELDKGKvkLVLVDTPGL-----DEFGGLGREELARLLLR 74

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117 520 CCEkgdtFFVLVFQLGRFTEEDKTAVAQLEAIFGADfmKYTIVLFTrKEDLGTGKLEDFIGNSDNKALKNIIKkcerrYC 599
Cdd:cd00882   75 GAD----LILLVVDSTDRESEEDAKLLILRRLRKEG--IPIILVGN-KIDLLEEREVEELLRLEELAKILGVP-----VF 142


                 ....*.
gi 795586117 600 AFNNKE 605
Cdd:cd00882  143 EVSAKT 148
Ras_like_GTPase cd00882
Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like ...
 14-134 7.88e-06

Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase superfamily. The Ras-like superfamily of small GTPases consists of several families with an extremely high degree of structural and functional similarity. The Ras superfamily is divided into at least four families in eukaryotes: the Ras, Rho, Rab, and Sar1/Arf families. This superfamily also includes proteins like the GTP translation factors, Era-like GTPases, and G-alpha chain of the heterotrimeric G proteins. Members of the Ras superfamily regulate a wide variety of cellular functions: the Ras family regulates gene expression, the Rho family regulates cytoskeletal reorganization and gene expression, the Rab and Sar1/Arf families regulate vesicle trafficking, and the Ran family regulates nucleocytoplasmic transport and microtubule organization. The GTP translation factor family regulates initiation, elongation, termination, and release in translation, and the Era-like GTPase family regulates cell division, sporulation, and DNA replication. Members of the Ras superfamily are identified by the GTP binding site, which is made up of five characteristic sequence motifs, and the switch I and switch II regions.


Pssm-ID: 206648 [Multi-domain]  Cd Length: 161  Bit Score: 46.30  E-value: 7.88e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117  14 LLLGKCRSGKSATGNAILGKDVFKSKfSDQIVTKMCQRESQVLR--ERKIVVIDTPDLFSSIAcaedkqRNIQRCLELSA 91
Cdd:cd00882    1 VVVGRGGVGKSSLLNALLGGEVGEVS-DVPGTTRDPDVYVKELDkgKVKLVLVDTPGLDEFGG------LGREELARLLL 73

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 795586117  92 PSLHALLLVIAIGHFTREDEETVTSIQQVFGAEARrhIIIVFT 134
Cdd:cd00882   74 RGADLILLVVDSTDRESEEDAKLLILRRLRKEGIP--IILVGN 114
3a0901s04IAP86 TIGR00993
chloroplast protein import component Toc86/159, G and M domains; The long precursor of the 86K ...
 233-364 7.97e-06

chloroplast protein import component Toc86/159, G and M domains; The long precursor of the 86K protein originally described is proposed to have three domains. The N-terminal A-domain is acidic, repetitive, weakly conserved, readily removed by proteolysis during chloroplast isolation, and not required for protein translocation. The other domains are designated G (GTPase) and M (membrane anchor); this family includes most of the G domain and all of M. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273381 [Multi-domain]  Cd Length: 763  Bit Score: 49.18  E-value: 7.97e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117  233 QLQSTGPEqDLGTSeLTVLLVGKRGAGKSAAGNSILGRRAFQT---GFSERSVTQSfsseSRSWRKKKVLIIDTP----- 304
Cdd:TIGR00993 106 QLEAEGQD-PLDFS-LNILVLGKSGVGKSATINSIFGEVKFSTdafGMGTTSVQEI----EGLVQGVKIRVIDTPglkss 179

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 795586117  305 --DISTLKNIGSEVRKHICTGPHAFLL-VTPLGFYTK--NDEAVLNTIQSSFGEKFFEYMVILFT 364
Cdd:TIGR00993 180 asDQSKNEKILSSVKKFIKKNPPDIVLyVDRLDMQTRdsNDLPLLRTITDVLGPSIWFNAIVTLT 244
YeeP COG3596
Predicted GTPase [General function prediction only];
409-517 2.25e-05

Predicted GTPase [General function prediction only];


Pssm-ID: 442815 [Multi-domain]  Cd Length: 318  Bit Score: 47.07  E-value: 2.25e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117 409 QRQVDELLEKIESMVhqngnkhcvfREKETLSIVLVGRSGTGKSATGNSILGS-LIFTSQLRaqPVTKTSQSGR-RTWDG 486
Cdd:COG3596   20 QVLRELLAEALERLL----------VELPPPVIALVGKTGAGKSSLINALFGAeVAEVGVGR--PCTREIQRYRlESDGL 87

                         90       100       110
                 ....*....|....*....|....*....|.
gi 795586117 487 QEVVVVDTPSFNQMLNVEKDPSQLEEEVKRC 517
Cdd:COG3596   88 PGLVLLDTPGLGEVNERDREYRELRELLPEA 118
Era_like cd00880
E. coli Ras-like protein (Era)-like GTPase; The Era (E. coli Ras-like protein)-like family ...
 15-135 2.11e-04

E. coli Ras-like protein (Era)-like GTPase; The Era (E. coli Ras-like protein)-like family includes several distinct subfamilies (TrmE/ThdF, FeoB, YihA (EngB), Era, and EngA/YfgK) that generally show sequence conservation in the region between the Walker A and B motifs (G1 and G3 box motifs), to the exclusion of other GTPases. TrmE is ubiquitous in bacteria and is a widespread mitochondrial protein in eukaryotes, but is absent from archaea. The yeast member of TrmE family, MSS1, is involved in mitochondrial translation; bacterial members are often present in translation-related operons. FeoB represents an unusual adaptation of GTPases for high-affinity iron (II) transport. YihA (EngB) family of GTPases is typified by the E. coli YihA, which is an essential protein involved in cell division control. Era is characterized by a distinct derivative of the KH domain (the pseudo-KH domain) which is located C-terminal to the GTPase domain. EngA and its orthologs are composed of two GTPase domains and, since the sequences of the two domains are more similar to each other than to other GTPases, it is likely that an ancient gene duplication, rather than a fusion of evolutionarily distinct GTPases, gave rise to this family.


Pssm-ID: 206646 [Multi-domain]  Cd Length: 161  Bit Score: 42.23  E-value: 2.11e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117  15 LLGKCRSGKSATGNAILGKDVFKSkfSDQI-VTKMCQRES-QVLRERKIVVIDTPDLFSsiaCAEDKQRNIQRCLELSAp 92
Cdd:cd00880    2 IFGRPNVGKSSLLNALLGQNVGIV--SPIPgTTRDPVRKEwELLPLGPVVLIDTPGLDE---EGGLGRERVEEARQVAD- 75

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 795586117  93 SLHALLLVIAIGHFTREDEETVTSIQqvfgaEARRHIIIVFTR 135
Cdd:cd00880   76 RADLVLLVVDSDLTPVEEEAKLGLLR-----ERGKPVLLVLNK 113
3a0901s04IAP86 TIGR00993
chloroplast protein import component Toc86/159, G and M domains; The long precursor of the 86K ...
 11-134 2.12e-04

chloroplast protein import component Toc86/159, G and M domains; The long precursor of the 86K protein originally described is proposed to have three domains. The N-terminal A-domain is acidic, repetitive, weakly conserved, readily removed by proteolysis during chloroplast isolation, and not required for protein translocation. The other domains are designated G (GTPase) and M (membrane anchor); this family includes most of the G domain and all of M. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273381 [Multi-domain]  Cd Length: 763  Bit Score: 44.56  E-value: 2.12e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117   11 LRLLLLGKCRSGKSATGNAILGKDVFkSKFSDQIVTKMCQRESQVLRERKIVVIDTPDLFSSiacAEDKQRN------IQ 84
Cdd:TIGR00993 119 LNILVLGKSGVGKSATINSIFGEVKF-STDAFGMGTTSVQEIEGLVQGVKIRVIDTPGLKSS---ASDQSKNekilssVK 194

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 795586117   85 RCLELSAPSLhaLLLVIAIGHFTRE--DEETVTSIQQVFGAEARRHIIIVFT 134
Cdd:TIGR00993 195 KFIKKNPPDI--VLYVDRLDMQTRDsnDLPLLRTITDVLGPSIWFNAIVTLT 244
3a0901s02IAP34 TIGR00991
GTP-binding protein (Chloroplast Envelope Protein Translocase); [Transport and binding ...
 240-304 1.30e-03

GTP-binding protein (Chloroplast Envelope Protein Translocase); [Transport and binding proteins, Nucleosides, purines and pyrimidines]


Pssm-ID: 130064  Cd Length: 313  Bit Score: 41.42  E-value: 1.30e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 795586117  240 EQDLgtSELTVLLVGKRGAGKSAAGNSILGRRAfqtgfserSVTQSFSSE-------SRSWRKKKVLIIDTP 304
Cdd:TIGR00991  33 EEDV--SSLTILVMGKGGVGKSSTVNSIIGERI--------ATVSAFQSEglrpmmvSRTRAGFTLNIIDTP 94
YeeP COG3596
Predicted GTPase [General function prediction only];
230-349 1.71e-03

Predicted GTPase [General function prediction only];


Pssm-ID: 442815 [Multi-domain]  Cd Length: 318  Bit Score: 40.90  E-value: 1.71e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117 230 RERQLQSTGPEQDLGTSELTVLLVGKRGAGKSAAGNSILGRRAFQTGFSERS--VTQSFSSESRSWRkkKVLIIDTPDIS 307
Cdd:COG3596   22 LRELLAEALERLLVELPPPVIALVGKTGAGKSSLINALFGAEVAEVGVGRPCtrEIQRYRLESDGLP--GLVLLDTPGLG 99

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 795586117 308 TLKN---IGSEVRKHICTgPHAFLLVT-PLGFYTKNDEAVLNTIQS 349
Cdd:COG3596  100 EVNErdrEYRELRELLPE-ADLILWVVkADDRALATDEEFLQALRA 144
MMR_HSR1 pfam01926
50S ribosome-binding GTPase; The full-length GTPase protein is required for the complete ...
 12-135 2.02e-03

50S ribosome-binding GTPase; The full-length GTPase protein is required for the complete activity of the protein of interacting with the 50S ribosome and binding of both adenine and guanine nucleotides, with a preference for guanine nucleotide.


Pssm-ID: 460387 [Multi-domain]  Cd Length: 113  Bit Score: 38.37  E-value: 2.02e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117   12 RLLLLGKCRSGKSATGNAILGKdvfKSKFSDQ-IVTKMCQRESQVLRERKIVVIDTPDLFSSIACAEDKQRNIQRCLEls 90
Cdd:pfam01926   1 RVALVGRPNVGKSTLINALTGA---KAIVSDYpGTTRDPNEGRLELKGKQIILVDTPGLIEGASEGEGLGRAFLAIIE-- 75

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 795586117   91 apsLHALLLVI-AIGHFTREDEEtvtsIQQvFGAEARRHIIIVFTR 135
Cdd:pfam01926  76 ---ADLILFVVdSEEGITPLDEE----LLE-LLRENKKPIILVLNK 113
Era_like cd00880
E. coli Ras-like protein (Era)-like GTPase; The Era (E. coli Ras-like protein)-like family ...
 252-423 2.09e-03

E. coli Ras-like protein (Era)-like GTPase; The Era (E. coli Ras-like protein)-like family includes several distinct subfamilies (TrmE/ThdF, FeoB, YihA (EngB), Era, and EngA/YfgK) that generally show sequence conservation in the region between the Walker A and B motifs (G1 and G3 box motifs), to the exclusion of other GTPases. TrmE is ubiquitous in bacteria and is a widespread mitochondrial protein in eukaryotes, but is absent from archaea. The yeast member of TrmE family, MSS1, is involved in mitochondrial translation; bacterial members are often present in translation-related operons. FeoB represents an unusual adaptation of GTPases for high-affinity iron (II) transport. YihA (EngB) family of GTPases is typified by the E. coli YihA, which is an essential protein involved in cell division control. Era is characterized by a distinct derivative of the KH domain (the pseudo-KH domain) which is located C-terminal to the GTPase domain. EngA and its orthologs are composed of two GTPase domains and, since the sequences of the two domains are more similar to each other than to other GTPases, it is likely that an ancient gene duplication, rather than a fusion of evolutionarily distinct GTPases, gave rise to this family.


Pssm-ID: 206646 [Multi-domain]  Cd Length: 161  Bit Score: 39.15  E-value: 2.09e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117 252 LVGKRGAGKSAAGNSILGRRAFQTgfSERS-VTQsfSSESRSWR---KKKVLIIDTPDISTLKNIGSE----VRKHIcTG 323
Cdd:cd00880    2 IFGRPNVGKSSLLNALLGQNVGIV--SPIPgTTR--DPVRKEWEllpLGPVVLIDTPGLDEEGGLGRErveeARQVA-DR 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 795586117 324 PHAFLLVTPLGFYTKNDEAVLNTiqssfgekFFEYM---VILFTrKEDLGDQDLDTVLRRSSETPHSLIQKCknryIAFN 400
Cdd:cd00880   77 ADLVLLVVDSDLTPVEEEAKLGL--------LRERGkpvLLVLN-KIDLVPESEEEELLRERKLELLPDLPV----IAVS 143

                        170       180
                 ....*....|....*....|...
gi 795586117 401 yratgEEEQRQVDELLEKIESMV 423
Cdd:cd00880  144 -----ALPGEGIDELRKKIAELL 161
YejF COG4172
ABC-type microcin C transport system, duplicated ATPase component YejF [Secondary metabolites ...
 437-490 6.73e-03

ABC-type microcin C transport system, duplicated ATPase component YejF [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 443332 [Multi-domain]  Cd Length: 533  Bit Score: 39.67  E-value: 6.73e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 795586117 437 ETLSivLVGRSGTGKSATGNSILGSLiftsqlraqPVTKTSQSGRRTWDGQEVV 490
Cdd:COG4172   37 ETLA--LVGESGSGKSVTALSILRLL---------PDPAAHPSGSILFDGQDLL 79
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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