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Conserved domains on  [gi|767970499|ref|XP_011541259|]
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cilia- and flagella-associated protein 68 isoform X1 [Homo sapiens]

Protein Classification

DUF1143 domain-containing protein( domain architecture ID 10535123)

DUF1143 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1143 pfam06608
Protein of unknown function (DUF1143); This family consists of several hypothetical mammalian ...
 32-165 1.43e-97

Protein of unknown function (DUF1143); This family consists of several hypothetical mammalian proteins (from mouse and human). The function of this family is unknown.


:

Pssm-ID: 461959  Cd Length: 148  Bit Score: 278.05  E-value: 1.43e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767970499   32 RQNLACFLTNPHCGSLVNADGHGEVWTDWNNMSKFFQYGWRCTTNENTYSNRTLMGNWNQERYDLRNIVQPKPLPSQFGH 111
Cdd:pfam06608  15 RQNLSCFLRNPHHGSLIHADGHGEVWTDWNSMSKFFQYGWRCTTNENSYSNRTLLGNWNQERYDLRNIVQPKPLPSQFGH 94

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 767970499  112 YFETTYDTSYNNKMPLSTHRFKREPHWFPGHQPELDPPRYKCTEKSTYMNSYSK 165
Cdd:pfam06608  95 CFETTYDTDYSKKTPHSTHRFKREPHWFPGHQPELDPPPYKCTAKSTYMMAYSD 148
 
Name Accession Description Interval E-value
DUF1143 pfam06608
Protein of unknown function (DUF1143); This family consists of several hypothetical mammalian ...
 32-165 1.43e-97

Protein of unknown function (DUF1143); This family consists of several hypothetical mammalian proteins (from mouse and human). The function of this family is unknown.


Pssm-ID: 461959  Cd Length: 148  Bit Score: 278.05  E-value: 1.43e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767970499   32 RQNLACFLTNPHCGSLVNADGHGEVWTDWNNMSKFFQYGWRCTTNENTYSNRTLMGNWNQERYDLRNIVQPKPLPSQFGH 111
Cdd:pfam06608  15 RQNLSCFLRNPHHGSLIHADGHGEVWTDWNSMSKFFQYGWRCTTNENSYSNRTLLGNWNQERYDLRNIVQPKPLPSQFGH 94

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 767970499  112 YFETTYDTSYNNKMPLSTHRFKREPHWFPGHQPELDPPRYKCTEKSTYMNSYSK 165
Cdd:pfam06608  95 CFETTYDTDYSKKTPHSTHRFKREPHWFPGHQPELDPPPYKCTAKSTYMMAYSD 148
 
Name Accession Description Interval E-value
DUF1143 pfam06608
Protein of unknown function (DUF1143); This family consists of several hypothetical mammalian ...
 32-165 1.43e-97

Protein of unknown function (DUF1143); This family consists of several hypothetical mammalian proteins (from mouse and human). The function of this family is unknown.


Pssm-ID: 461959  Cd Length: 148  Bit Score: 278.05  E-value: 1.43e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767970499   32 RQNLACFLTNPHCGSLVNADGHGEVWTDWNNMSKFFQYGWRCTTNENTYSNRTLMGNWNQERYDLRNIVQPKPLPSQFGH 111
Cdd:pfam06608  15 RQNLSCFLRNPHHGSLIHADGHGEVWTDWNSMSKFFQYGWRCTTNENSYSNRTLLGNWNQERYDLRNIVQPKPLPSQFGH 94

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 767970499  112 YFETTYDTSYNNKMPLSTHRFKREPHWFPGHQPELDPPRYKCTEKSTYMNSYSK 165
Cdd:pfam06608  95 CFETTYDTDYSKKTPHSTHRFKREPHWFPGHQPELDPPPYKCTAKSTYMMAYSD 148
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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