mis18-binding protein 1 isoform X3 [Homo sapiens]
SANT/Myb-like DNA-binding domain-containing protein( domain architecture ID 10557545)
SANT (SWI3, ADA2, N-CoR and TFIIIB)/Myb-like DNA-binding domain-containing protein binds DNA and may function as a transcription factor; also contains a SANTA domain (SANT Associated domain) which may play a role in regulating chromatin remodelling and in protein-protein interactions
List of domain hits
Name | Accession | Description | Interval | E-value | ||
SANTA | pfam09133 | SANTA (SANT Associated); The SANTA domain (SANT Associated domain) is approximately 90 amino ... |
11-82 | 8.90e-30 | ||
SANTA (SANT Associated); The SANTA domain (SANT Associated domain) is approximately 90 amino acids in length and is conserved in Eukaryota. It is sometimes found in association with the SANT domain (pfam00249, also known as Myb-like DNA-binding domain) implying a putative function in regulating chromatin remodelling. Sequence analysis has showed that the SANTA domain is likely to form four central beta-sheets with three flanking alpha- helixes. Many conserved hydrophobic residues are present which implying a possible role in protein-protein interactions. : Pssm-ID: 462689 Cd Length: 87 Bit Score: 112.73 E-value: 8.90e-30
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SANT | cd00167 | 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric ... |
491-537 | 3.49e-06 | ||
'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is also found in regulatory transcriptional repressor complexes where it also binds DNA. : Pssm-ID: 238096 [Multi-domain] Cd Length: 45 Bit Score: 44.49 E-value: 3.49e-06
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Name | Accession | Description | Interval | E-value | ||
SANTA | pfam09133 | SANTA (SANT Associated); The SANTA domain (SANT Associated domain) is approximately 90 amino ... |
11-82 | 8.90e-30 | ||
SANTA (SANT Associated); The SANTA domain (SANT Associated domain) is approximately 90 amino acids in length and is conserved in Eukaryota. It is sometimes found in association with the SANT domain (pfam00249, also known as Myb-like DNA-binding domain) implying a putative function in regulating chromatin remodelling. Sequence analysis has showed that the SANTA domain is likely to form four central beta-sheets with three flanking alpha- helixes. Many conserved hydrophobic residues are present which implying a possible role in protein-protein interactions. Pssm-ID: 462689 Cd Length: 87 Bit Score: 112.73 E-value: 8.90e-30
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SANT | cd00167 | 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric ... |
491-537 | 3.49e-06 | ||
'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is also found in regulatory transcriptional repressor complexes where it also binds DNA. Pssm-ID: 238096 [Multi-domain] Cd Length: 45 Bit Score: 44.49 E-value: 3.49e-06
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SANT | smart00717 | SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains; |
490-539 | 4.18e-06 | ||
SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains; Pssm-ID: 197842 [Multi-domain] Cd Length: 49 Bit Score: 44.14 E-value: 4.18e-06
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Name | Accession | Description | Interval | E-value | ||
SANTA | pfam09133 | SANTA (SANT Associated); The SANTA domain (SANT Associated domain) is approximately 90 amino ... |
11-82 | 8.90e-30 | ||
SANTA (SANT Associated); The SANTA domain (SANT Associated domain) is approximately 90 amino acids in length and is conserved in Eukaryota. It is sometimes found in association with the SANT domain (pfam00249, also known as Myb-like DNA-binding domain) implying a putative function in regulating chromatin remodelling. Sequence analysis has showed that the SANTA domain is likely to form four central beta-sheets with three flanking alpha- helixes. Many conserved hydrophobic residues are present which implying a possible role in protein-protein interactions. Pssm-ID: 462689 Cd Length: 87 Bit Score: 112.73 E-value: 8.90e-30
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SANT | cd00167 | 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric ... |
491-537 | 3.49e-06 | ||
'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is also found in regulatory transcriptional repressor complexes where it also binds DNA. Pssm-ID: 238096 [Multi-domain] Cd Length: 45 Bit Score: 44.49 E-value: 3.49e-06
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SANT | smart00717 | SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains; |
490-539 | 4.18e-06 | ||
SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains; Pssm-ID: 197842 [Multi-domain] Cd Length: 49 Bit Score: 44.14 E-value: 4.18e-06
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Blast search parameters | ||||
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