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Conserved domains on  [gi|1034652036|ref|XP_011534524|]
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cellular communication network factor 6 isoform X4 [Homo sapiens]

Protein Classification

IGFBP domain-containing protein( domain architecture ID 10446222)

IGFBP domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
IGFBP pfam00219
Insulin-like growth factor binding protein;
69-121 2.91e-09

Insulin-like growth factor binding protein;


:

Pssm-ID: 459717  Cd Length: 53  Bit Score: 50.02  E-value: 2.91e-09
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1034652036  69 CHWPC---KCPQQKPRCPPGVslVRDGCGCCKICAKQPGEICNEADL-CDphKGLYC 121
Cdd:pfam00219   1 CPPPCdpeRCPPPPPGCPAGV--VLDGCGCCKVCARQEGEPCGVYTPpCG--KGLRC 53
 
Name Accession Description Interval E-value
IGFBP pfam00219
Insulin-like growth factor binding protein;
69-121 2.91e-09

Insulin-like growth factor binding protein;


Pssm-ID: 459717  Cd Length: 53  Bit Score: 50.02  E-value: 2.91e-09
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1034652036  69 CHWPC---KCPQQKPRCPPGVslVRDGCGCCKICAKQPGEICNEADL-CDphKGLYC 121
Cdd:pfam00219   1 CPPPCdpeRCPPPPPGCPAGV--VLDGCGCCKVCARQEGEPCGVYTPpCG--KGLRC 53
IB smart00121
Insulin growth factor-binding protein homologues; High affinity binding partners of ...
 72-129 2.36e-05

Insulin growth factor-binding protein homologues; High affinity binding partners of insulin-like growth factors.


Pssm-ID: 197525  Cd Length: 75  Bit Score: 40.53  E-value: 2.36e-05
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 1034652036   72 PCKCPQQKPRCPPGVslVRDGCGCCKICAKQPGEICNeADLCDPHKGLYCDYSVDRPR 129
Cdd:smart00121   8 PARCPPCPPGCAELV--RLDGCGCCPVCARQEGEPCG-VYTPRCAPGLRCQPPPGEER 62
 
Name Accession Description Interval E-value
IGFBP pfam00219
Insulin-like growth factor binding protein;
69-121 2.91e-09

Insulin-like growth factor binding protein;


Pssm-ID: 459717  Cd Length: 53  Bit Score: 50.02  E-value: 2.91e-09
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1034652036  69 CHWPC---KCPQQKPRCPPGVslVRDGCGCCKICAKQPGEICNEADL-CDphKGLYC 121
Cdd:pfam00219   1 CPPPCdpeRCPPPPPGCPAGV--VLDGCGCCKVCARQEGEPCGVYTPpCG--KGLRC 53
IB smart00121
Insulin growth factor-binding protein homologues; High affinity binding partners of ...
 72-129 2.36e-05

Insulin growth factor-binding protein homologues; High affinity binding partners of insulin-like growth factors.


Pssm-ID: 197525  Cd Length: 75  Bit Score: 40.53  E-value: 2.36e-05
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 1034652036   72 PCKCPQQKPRCPPGVslVRDGCGCCKICAKQPGEICNeADLCDPHKGLYCDYSVDRPR 129
Cdd:smart00121   8 PARCPPCPPGCAELV--RLDGCGCCPVCARQEGEPCG-VYTPRCAPGLRCQPPPGEER 62
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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