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Conserved domains on  [gi|767932979|ref|XP_011530691|]
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FH2 domain-containing protein 1 isoform X1 [Homo sapiens]

Protein Classification

FH2 domain-containing protein( domain architecture ID 13671889)

FH2 domain-containing protein; FH2 domain-containing protein similar to formin homology proteins that control rearrangements of the actin cytoskeleton, especially in the context of cytokinesis and cell polarization; FH2 domain-containing protein; FH2 domain-containing protein similar to formin homology proteins that control rearrangements of the actin cytoskeleton, especially in the context of cytokinesis and cell polarization

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
FH2 pfam02181
Formin Homology 2 Domain;
93-457 2.60e-125

Formin Homology 2 Domain;


:

Pssm-ID: 396655  Cd Length: 372  Bit Score: 388.94  E-value: 2.60e-125
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979    93 KKKRMRSFFWKTIPEEQVRGktNIWTLAARQEHHYQIDTKTIEELFGQQEDTTKSSlprrGRTLNSSFREAREEITILDA 172
Cdd:pfam02181    7 PKKKLKPLHWDKVRPSQDRG--TVWDKLDDESFELDGDLSELEELFSAKAKTKKNK----KSEDKSSSKKKPKEVSLLDP 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979   173 KRSMNIGIFLKQFKKSPRSIVEDIHQGKSEHYGSETLREFLKFLPESEEVKKLKAFSGDVSKLSLADSFLYGLIQVPNYS 252
Cdd:pfam02181   81 KRAQNIAILLRKLKLPPEEIIQAILEGDEDALDLELLENLLKMAPTKEELKKLKEYKGDPSELGRAEQFLLELSKIPRLE 160
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979   253 LRIEAMVLKKEFLPSCSSLYTDITVLRTAIKELMSCEELHSILHLVLQAGNIMNAGGYAGNAVGFKLSSLLKLADTKANK 332
Cdd:pfam02181  161 ARLRALLFKSTFEEEIEELKPSLEALEAASEELRNSRKFKKLLELILALGNYMNDGTRRGQAKGFKLSSLLKLSDTKSTD 240
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979   333 PGMNLLHFVAQEAQKKDTILLNFSEKLHHVQKTARLSLENTEAELHLLFVRTKSLKENIQRDGE-------LCQQMEDFL 405
Cdd:pfam02181  241 NKTTLLHYLVKIIREKFPEVLDFSSELSHVKKAAKVNLEQLEKDVKQLERGLKKLERELELSALdehpddkFREVLKEFL 320
                          330       340       350       360       370
                   ....*....|....*....|....*....|....*....|....*....|..
gi 767932979   406 QFAIEKLRELECWKQELQDEAYTLIDFFCEDKKTMKLDECFQIFRDFCTKFN 457
Cdd:pfam02181  321 KSAEEKLDKLESLLREALELFKELVEYFGEDPKETSPEEFFKILRDFLKEFK 372
PHA03307 super family cl33723
transcriptional regulator ICP4; Provisional
730-1136 7.29e-10

transcriptional regulator ICP4; Provisional


The actual alignment was detected with superfamily member PHA03307:

Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 63.65  E-value: 7.29e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979  730 DALGSLSPALEDGKAAPDEPGSAAL----GSVGSSDPENKDPRPLFCI-SDTTDCSLTLDCSEGTDSRPRGGDPEEGGEG 804
Cdd:PHA03307   12 EAAAEGGEFFPRPPATPGDAADDLLsgsqGQLVSDSAELAAVTVVAGAaACDRFEPPTGPPPGPGTEAPANESRSTPTWS 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979  805 DGSMSSGVGEMGDSQVSSNPtSSPPGEAPAPVSVDSEPSCKGGLPRDKPTKRKDVVAPKRGSLK-EASPGASKPGSARRS 883
Cdd:PHA03307   92 LSTLAPASPAREGSPTPPGP-SSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAaGASPAAVASDAASSR 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979  884 QGAVAksvrtLTASENESMRKVMPitKSSRGAGWRRPELSSRGPSQNPPSSTDtvwsrqnSVRRASTGAEEQRLPRGSSG 963
Cdd:PHA03307  171 QAALP-----LSSPEETARAPSSP--PAEPPPSTPPAAASPRPPRRSSPISAS-------ASSPAPAPGRSAADDAGASS 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979  964 SSSTRP-GRDVPLQPRGSFKKPSAKPLRNLPRQK---PEENKTCRAHSEGPESPKEEPKTPSVPSVPHELPRVP----SF 1035
Cdd:PHA03307  237 SDSSSSeSSGCGWGPENECPLPRPAPITLPTRIWeasGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSspraSS 316
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979 1036 ARNTVASSSRSMRTDLPPVAKAPGITRTVSQRQLRVKGDPEDAAPKDSstlrraSSARAPKKRPESAEGPSANTEAPLKA 1115
Cdd:PHA03307  317 SSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSS------PRKRPRPSRAPSSPAASAGRPTRRRA 390
                         410       420
                  ....*....|....*....|.
gi 767932979 1116 RGAGERASLRRKDSSRTTLGR 1136
Cdd:PHA03307  391 RAAVAGRARRRDATGRFPAGR 411
 
Name Accession Description Interval E-value
FH2 pfam02181
Formin Homology 2 Domain;
93-457 2.60e-125

Formin Homology 2 Domain;


Pssm-ID: 396655  Cd Length: 372  Bit Score: 388.94  E-value: 2.60e-125
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979    93 KKKRMRSFFWKTIPEEQVRGktNIWTLAARQEHHYQIDTKTIEELFGQQEDTTKSSlprrGRTLNSSFREAREEITILDA 172
Cdd:pfam02181    7 PKKKLKPLHWDKVRPSQDRG--TVWDKLDDESFELDGDLSELEELFSAKAKTKKNK----KSEDKSSSKKKPKEVSLLDP 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979   173 KRSMNIGIFLKQFKKSPRSIVEDIHQGKSEHYGSETLREFLKFLPESEEVKKLKAFSGDVSKLSLADSFLYGLIQVPNYS 252
Cdd:pfam02181   81 KRAQNIAILLRKLKLPPEEIIQAILEGDEDALDLELLENLLKMAPTKEELKKLKEYKGDPSELGRAEQFLLELSKIPRLE 160
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979   253 LRIEAMVLKKEFLPSCSSLYTDITVLRTAIKELMSCEELHSILHLVLQAGNIMNAGGYAGNAVGFKLSSLLKLADTKANK 332
Cdd:pfam02181  161 ARLRALLFKSTFEEEIEELKPSLEALEAASEELRNSRKFKKLLELILALGNYMNDGTRRGQAKGFKLSSLLKLSDTKSTD 240
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979   333 PGMNLLHFVAQEAQKKDTILLNFSEKLHHVQKTARLSLENTEAELHLLFVRTKSLKENIQRDGE-------LCQQMEDFL 405
Cdd:pfam02181  241 NKTTLLHYLVKIIREKFPEVLDFSSELSHVKKAAKVNLEQLEKDVKQLERGLKKLERELELSALdehpddkFREVLKEFL 320
                          330       340       350       360       370
                   ....*....|....*....|....*....|....*....|....*....|..
gi 767932979   406 QFAIEKLRELECWKQELQDEAYTLIDFFCEDKKTMKLDECFQIFRDFCTKFN 457
Cdd:pfam02181  321 KSAEEKLDKLESLLREALELFKELVEYFGEDPKETSPEEFFKILRDFLKEFK 372
FH2 smart00498
Formin Homology 2 Domain; FH proteins control rearrangements of the actin cytoskeleton, ...
94-480 3.02e-57

Formin Homology 2 Domain; FH proteins control rearrangements of the actin cytoskeleton, especially in the context of cytokinesis and cell polarisation. Members of this family have been found to interact with Rho-GTPases, profilin and other actin-assoziated proteins. These interactions are mediated by the proline-rich FH1 domain, usually located in front of FH2 (but not listed in SMART). Despite this cytosolic function, vertebrate formins have been assigned functions within the nucleus. A set of Formin-Binding Proteins (FBPs) has been shown to bind FH1 with their WW domain.


Pssm-ID: 214697 [Multi-domain]  Cd Length: 392  Bit Score: 203.35  E-value: 3.02e-57
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979     94 KKRMRSFFWKTIPEEQVRGktniwTLAARQEHHYQIDTKTIEELFGQQEDTTKSSLPR-RGRTLNSsfREAREEITILDA 172
Cdd:smart00498    7 KKKLKPLHWDKLNPSDLSG-----TVWDKIDEESEGDLDELEELFSAKEKTKSASKDVsEKKSILK--KKASQEFKILDP 79
                            90       100       110       120       130       140       150       160
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979    173 KRSMNIGIFLKQFKKSPRSIVEDIHQGKSEHYGSETLREFLKFLPESEEVKKLKAFSG-DVSKLSLADSFLYGLIQVPNY 251
Cdd:smart00498   80 KRSQNLAILLRKLHMSYEEIKEAILEGDEDVLSVDLLEQLLKYAPTKEELKKLREYKEeDPEELARAEQFLLLISNIPYL 159
                           170       180       190       200       210       220       230       240
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979    252 SLRIEAMVLKKEFLPSCSSLYTDITVLRTAIKELMSCEELHSILHLVLQAGNIMNAGGYAGNAVGFKLSSLLKLADTKAN 331
Cdd:smart00498  160 EERLNALLFKANFEEEVEDLKPQIEKVEAACEELRESKKFRKLLELILAIGNYMNGGSRRGQAYGFKLSSLLKLSDVKSA 239
                           250       260       270       280       290       300       310       320
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979    332 KPGMNLLHFVAQEAQKKDtiLLNFSEKLHHvqktarlslenteaelhllfvrtkslkeniqrDGELCQQMEDFLQFAIEK 411
Cdd:smart00498  240 DNKTTLLHFLVKIIRKKY--LGGLSDPENL--------------------------------DDKFIEVMKPFLKAAKEK 285
                           330       340       350       360       370       380       390
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979    412 LRELECWKQELQDEAYTLIDFFCEDKKTMKLDECFQIFRDFCTKFNKAVKDNHDR-EAQELRQLQRLKEQ 480
Cdd:smart00498  286 YDKLQKDLSDLKTRFEKLVEYYGEDPKDTSPEEFFKDFNEFLKEFSKAAEENIKKeEEEEERRKKLVKET 355
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
730-1136 7.29e-10

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 63.65  E-value: 7.29e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979  730 DALGSLSPALEDGKAAPDEPGSAAL----GSVGSSDPENKDPRPLFCI-SDTTDCSLTLDCSEGTDSRPRGGDPEEGGEG 804
Cdd:PHA03307   12 EAAAEGGEFFPRPPATPGDAADDLLsgsqGQLVSDSAELAAVTVVAGAaACDRFEPPTGPPPGPGTEAPANESRSTPTWS 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979  805 DGSMSSGVGEMGDSQVSSNPtSSPPGEAPAPVSVDSEPSCKGGLPRDKPTKRKDVVAPKRGSLK-EASPGASKPGSARRS 883
Cdd:PHA03307   92 LSTLAPASPAREGSPTPPGP-SSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAaGASPAAVASDAASSR 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979  884 QGAVAksvrtLTASENESMRKVMPitKSSRGAGWRRPELSSRGPSQNPPSSTDtvwsrqnSVRRASTGAEEQRLPRGSSG 963
Cdd:PHA03307  171 QAALP-----LSSPEETARAPSSP--PAEPPPSTPPAAASPRPPRRSSPISAS-------ASSPAPAPGRSAADDAGASS 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979  964 SSSTRP-GRDVPLQPRGSFKKPSAKPLRNLPRQK---PEENKTCRAHSEGPESPKEEPKTPSVPSVPHELPRVP----SF 1035
Cdd:PHA03307  237 SDSSSSeSSGCGWGPENECPLPRPAPITLPTRIWeasGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSspraSS 316
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979 1036 ARNTVASSSRSMRTDLPPVAKAPGITRTVSQRQLRVKGDPEDAAPKDSstlrraSSARAPKKRPESAEGPSANTEAPLKA 1115
Cdd:PHA03307  317 SSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSS------PRKRPRPSRAPSSPAASAGRPTRRRA 390
                         410       420
                  ....*....|....*....|.
gi 767932979 1116 RGAGERASLRRKDSSRTTLGR 1136
Cdd:PHA03307  391 RAAVAGRARRRDATGRFPAGR 411
 
Name Accession Description Interval E-value
FH2 pfam02181
Formin Homology 2 Domain;
93-457 2.60e-125

Formin Homology 2 Domain;


Pssm-ID: 396655  Cd Length: 372  Bit Score: 388.94  E-value: 2.60e-125
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979    93 KKKRMRSFFWKTIPEEQVRGktNIWTLAARQEHHYQIDTKTIEELFGQQEDTTKSSlprrGRTLNSSFREAREEITILDA 172
Cdd:pfam02181    7 PKKKLKPLHWDKVRPSQDRG--TVWDKLDDESFELDGDLSELEELFSAKAKTKKNK----KSEDKSSSKKKPKEVSLLDP 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979   173 KRSMNIGIFLKQFKKSPRSIVEDIHQGKSEHYGSETLREFLKFLPESEEVKKLKAFSGDVSKLSLADSFLYGLIQVPNYS 252
Cdd:pfam02181   81 KRAQNIAILLRKLKLPPEEIIQAILEGDEDALDLELLENLLKMAPTKEELKKLKEYKGDPSELGRAEQFLLELSKIPRLE 160
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979   253 LRIEAMVLKKEFLPSCSSLYTDITVLRTAIKELMSCEELHSILHLVLQAGNIMNAGGYAGNAVGFKLSSLLKLADTKANK 332
Cdd:pfam02181  161 ARLRALLFKSTFEEEIEELKPSLEALEAASEELRNSRKFKKLLELILALGNYMNDGTRRGQAKGFKLSSLLKLSDTKSTD 240
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979   333 PGMNLLHFVAQEAQKKDTILLNFSEKLHHVQKTARLSLENTEAELHLLFVRTKSLKENIQRDGE-------LCQQMEDFL 405
Cdd:pfam02181  241 NKTTLLHYLVKIIREKFPEVLDFSSELSHVKKAAKVNLEQLEKDVKQLERGLKKLERELELSALdehpddkFREVLKEFL 320
                          330       340       350       360       370
                   ....*....|....*....|....*....|....*....|....*....|..
gi 767932979   406 QFAIEKLRELECWKQELQDEAYTLIDFFCEDKKTMKLDECFQIFRDFCTKFN 457
Cdd:pfam02181  321 KSAEEKLDKLESLLREALELFKELVEYFGEDPKETSPEEFFKILRDFLKEFK 372
FH2 smart00498
Formin Homology 2 Domain; FH proteins control rearrangements of the actin cytoskeleton, ...
94-480 3.02e-57

Formin Homology 2 Domain; FH proteins control rearrangements of the actin cytoskeleton, especially in the context of cytokinesis and cell polarisation. Members of this family have been found to interact with Rho-GTPases, profilin and other actin-assoziated proteins. These interactions are mediated by the proline-rich FH1 domain, usually located in front of FH2 (but not listed in SMART). Despite this cytosolic function, vertebrate formins have been assigned functions within the nucleus. A set of Formin-Binding Proteins (FBPs) has been shown to bind FH1 with their WW domain.


Pssm-ID: 214697 [Multi-domain]  Cd Length: 392  Bit Score: 203.35  E-value: 3.02e-57
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979     94 KKRMRSFFWKTIPEEQVRGktniwTLAARQEHHYQIDTKTIEELFGQQEDTTKSSLPR-RGRTLNSsfREAREEITILDA 172
Cdd:smart00498    7 KKKLKPLHWDKLNPSDLSG-----TVWDKIDEESEGDLDELEELFSAKEKTKSASKDVsEKKSILK--KKASQEFKILDP 79
                            90       100       110       120       130       140       150       160
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979    173 KRSMNIGIFLKQFKKSPRSIVEDIHQGKSEHYGSETLREFLKFLPESEEVKKLKAFSG-DVSKLSLADSFLYGLIQVPNY 251
Cdd:smart00498   80 KRSQNLAILLRKLHMSYEEIKEAILEGDEDVLSVDLLEQLLKYAPTKEELKKLREYKEeDPEELARAEQFLLLISNIPYL 159
                           170       180       190       200       210       220       230       240
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979    252 SLRIEAMVLKKEFLPSCSSLYTDITVLRTAIKELMSCEELHSILHLVLQAGNIMNAGGYAGNAVGFKLSSLLKLADTKAN 331
Cdd:smart00498  160 EERLNALLFKANFEEEVEDLKPQIEKVEAACEELRESKKFRKLLELILAIGNYMNGGSRRGQAYGFKLSSLLKLSDVKSA 239
                           250       260       270       280       290       300       310       320
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979    332 KPGMNLLHFVAQEAQKKDtiLLNFSEKLHHvqktarlslenteaelhllfvrtkslkeniqrDGELCQQMEDFLQFAIEK 411
Cdd:smart00498  240 DNKTTLLHFLVKIIRKKY--LGGLSDPENL--------------------------------DDKFIEVMKPFLKAAKEK 285
                           330       340       350       360       370       380       390
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979    412 LRELECWKQELQDEAYTLIDFFCEDKKTMKLDECFQIFRDFCTKFNKAVKDNHDR-EAQELRQLQRLKEQ 480
Cdd:smart00498  286 YDKLQKDLSDLKTRFEKLVEYYGEDPKDTSPEEFFKDFNEFLKEFSKAAEENIKKeEEEEERRKKLVKET 355
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
730-1136 7.29e-10

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 63.65  E-value: 7.29e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979  730 DALGSLSPALEDGKAAPDEPGSAAL----GSVGSSDPENKDPRPLFCI-SDTTDCSLTLDCSEGTDSRPRGGDPEEGGEG 804
Cdd:PHA03307   12 EAAAEGGEFFPRPPATPGDAADDLLsgsqGQLVSDSAELAAVTVVAGAaACDRFEPPTGPPPGPGTEAPANESRSTPTWS 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979  805 DGSMSSGVGEMGDSQVSSNPtSSPPGEAPAPVSVDSEPSCKGGLPRDKPTKRKDVVAPKRGSLK-EASPGASKPGSARRS 883
Cdd:PHA03307   92 LSTLAPASPAREGSPTPPGP-SSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAaGASPAAVASDAASSR 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979  884 QGAVAksvrtLTASENESMRKVMPitKSSRGAGWRRPELSSRGPSQNPPSSTDtvwsrqnSVRRASTGAEEQRLPRGSSG 963
Cdd:PHA03307  171 QAALP-----LSSPEETARAPSSP--PAEPPPSTPPAAASPRPPRRSSPISAS-------ASSPAPAPGRSAADDAGASS 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979  964 SSSTRP-GRDVPLQPRGSFKKPSAKPLRNLPRQK---PEENKTCRAHSEGPESPKEEPKTPSVPSVPHELPRVP----SF 1035
Cdd:PHA03307  237 SDSSSSeSSGCGWGPENECPLPRPAPITLPTRIWeasGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSspraSS 316
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979 1036 ARNTVASSSRSMRTDLPPVAKAPGITRTVSQRQLRVKGDPEDAAPKDSstlrraSSARAPKKRPESAEGPSANTEAPLKA 1115
Cdd:PHA03307  317 SSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSS------PRKRPRPSRAPSSPAASAGRPTRRRA 390
                         410       420
                  ....*....|....*....|.
gi 767932979 1116 RGAGERASLRRKDSSRTTLGR 1136
Cdd:PHA03307  391 RAAVAGRARRRDATGRFPAGR 411
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
708-997 1.46e-08

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 59.41  E-value: 1.46e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979  708 SVGHRGPQSLSASSSSLTPMGRDALGSLSPAL-----EDGKAAPDEPGSAALGSVGSSDPENKDPRPLFCISDTTDCSLT 782
Cdd:PHA03307  143 SPGPPPAASPPAAGASPAAVASDAASSRQAALplsspEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAP 222
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979  783 LDCSEGTDSRPRGGDPEEGGEGDGSMSSGVGEMGDSQVSSNPTSSPPGEAPAPVSVDSEPSCKGglPRDKPTKRKDVVAP 862
Cdd:PHA03307  223 APGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPAS--SSSSPRERSPSPSP 300
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979  863 KRGSLKEASPGASKPGSARRSQGAVAKSvrTLTASENESMRKVMP------ITKSSRGAGWRRPELSSRGPSQNPPSSTD 936
Cdd:PHA03307  301 SSPGSGPAPSSPRASSSSSSSRESSSSS--TSSSSESSRGAAVSPgpspsrSPSPSRPPPPADPSSPRKRPRPSRAPSSP 378
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 767932979  937 TVWSRQNSVRRASTGAEEQRLPRGssgssstRPGRDVPLQPRGSFKKPSAKPLRNLPRQKP 997
Cdd:PHA03307  379 AASAGRPTRRRARAAVAGRARRRD-------ATGRFPAGRPRPSPLDAGAASGAFYARYPL 432
PHA03247 PHA03247
large tegument protein UL36; Provisional
572-1123 5.16e-06

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 51.09  E-value: 5.16e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979  572 PRSSPRQARPTIACLEPAEVRHQDSS-------FAHKPQASGGQEEAPNPPSAQAHQLAAAQPENHASAFPRARRQGVSV 644
Cdd:PHA03247 2589 PDAPPQSARPRAPVDDRGDPRGPAPPsplppdtHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRAR 2668
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979  645 LRKRYSEPVSLGSAQSPPLSPLALGIkehelVTGLAQFNLQGSQGMEETSQLTLSDFSPMELESVGHRGPQSLSASSSSL 724
Cdd:PHA03247 2669 RLGRAAQASSPPQRPRRRAARPTVGS-----LTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPA 2743
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979  725 TPMGRDALGslSPALEDGKAAPDEPGSAALGSVGSSDPENKDPRPlfcisdttdcsLTLDCSEGTDSRPRGGDPEEGGEG 804
Cdd:PHA03247 2744 VPAGPATPG--GPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRP-----------AVASLSESRESLPSPWDPADPPAA 2810
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979  805 DGSMSSGVgemgdsqvssNPTSSPPGEAPAPVSVDSEPSCKGGLPRDKPTKRKDVVAPKRGSLKEASPGASKPGSARRSQ 884
Cdd:PHA03247 2811 VLAPAAAL----------PPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPAR 2880
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979  885 gavaksvrtltasenesmrkvMPITKSSRGAGWRRPELSSRGPSQNPPsstdtvwSRQNSVRRASTGAEEQRLPRGSSGS 964
Cdd:PHA03247 2881 ---------------------PPVRRLARPAVSRSTESFALPPDQPER-------PPQPQAPPPPQPQPQPPPPPQPQPP 2932
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979  965 SSTRPGRDVPLQPR----GSFKKPSAKPLRNLPRQKPEENKTCRAHSEGPESPKEEPKTPSVPSVPHELPRVPSFArntv 1040
Cdd:PHA03247 2933 PPPPPRPQPPLAPTtdpaGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLTGHSLSRVSSWA---- 3008
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979 1041 ASSSRSMRTDLPPVAkapgitrtvSQRQLRVKGDPEDAapkDSSTLRRASSAR----APKKRPESAEGPSANTEAPlKAR 1116
Cdd:PHA03247 3009 SSLALHEETDPPPVS---------LKQTLWPPDDTEDS---DADSLFDSDSERsdleALDPLPPEPHDPFAHEPDP-ATP 3075

                  ....*..
gi 767932979 1117 GAGERAS 1123
Cdd:PHA03247 3076 EAGARES 3082
PHA03247 PHA03247
large tegument protein UL36; Provisional
812-1142 8.62e-06

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 50.32  E-value: 8.62e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979  812 VGEMGDSQVSSNPTSSPPG------EAPAPVSVDSEPSCKGGLPRDKPTKRKDVVAPKRGSLKeaspgaskpgsaRRSQg 885
Cdd:PHA03247 2602 VDDRGDPRGPAPPSPLPPDthapdpPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRP------------RRAR- 2668
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979  886 avaksvrtltasenesmRKVMPITKSSRGAGWRRPELSsrgpsqnppsstDTVWSRQNSVRRASTGAEEQRLPRGSSGSS 965
Cdd:PHA03247 2669 -----------------RLGRAAQASSPPQRPRRRAAR------------PTVGSLTSLADPPPPPPTPEPAPHALVSAT 2719
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979  966 STRPGrdvPLQPRGSFKKPSAKPlrnLPRQKPEENKTcrahsEGPESPKEEPKTPSVPSVPHElPRVPsfarntVASSSR 1045
Cdd:PHA03247 2720 PLPPG---PAAARQASPALPAAP---APPAVPAGPAT-----PGGPARPARPPTTAGPPAPAP-PAAP------AAGPPR 2781
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979 1046 SmrtdLPPVAKAPGITRTVSQRQLRVKGDPEDAAPKDSSTLRRASSARAPKKRPESA--------EGPSANTEAPLKARG 1117
Cdd:PHA03247 2782 R----LTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAqptappppPGPPPPSLPLGGSVA 2857
                         330       340
                  ....*....|....*....|....*
gi 767932979 1118 AGerASLRRKDSSRTTLGRILNPLR 1142
Cdd:PHA03247 2858 PG--GDVRRRPPSRSPAAKPAAPAR 2880
PTZ00449 PTZ00449
104 kDa microneme/rhoptry antigen; Provisional
809-1138 1.25e-03

104 kDa microneme/rhoptry antigen; Provisional


Pssm-ID: 185628 [Multi-domain]  Cd Length: 943  Bit Score: 43.14  E-value: 1.25e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979  809 SSGVGEMGDSQVSSNPTS-SPPGEAPapvsvDSEPSCKGGLPRD-KPTKRKdvVAPKRGSLKEASPGASKPGSARRSQGA 886
Cdd:PTZ00449  528 EGEEGEHEDSKESDEPKEgGKPGETK-----EGEVGKKPGPAKEhKPSKIP--TLSKKPEFPKDPKHPKDPEEPKKPKRP 600
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979  887 VAKSVRTLTASENesMRKVMPITKSSRgagwrRPElSSRGPsQNPPSSTdtvwsRQNSVRRAstgaEEQRLPRGSSGSSS 966
Cdd:PTZ00449  601 RSAQRPTRPKSPK--LPELLDIPKSPK-----RPE-SPKSP-KRPPPPQ-----RPSSPERP----EGPKIIKSPKPPKS 662
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979  967 TRPGRDVPLQPR--GSFKKPSAKPLRNLPRQKPEENKTCRAHSEGPESPKEE--------PKTPSVPSVPHELPRVPSfa 1036
Cdd:PTZ00449  663 PKPPFDPKFKEKfyDDYLDAAAKSKETKTTVVLDESFESILKETLPETPGTPfttprplpPKLPRDEEFPFEPIGDPD-- 740
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979 1037 rntvASSSRSMRTDLPPVAKAPGITRTVSQRQLRvkgDPEDAAPKDSSTLRRASSARAPKKRPESaegPSANTEAPL--- 1113
Cdd:PTZ00449  741 ----AEQPDDIEFFTPPEEERTFFHETPADTPLP---DILAEEFKEEDIHAETGEPDEAMKRPDS---PSEHEDKPPgdh 810
                         330       340
                  ....*....|....*....|....*....
gi 767932979 1114 ----KARGAGERASLRRKDsSRTTLGRIL 1138
Cdd:PTZ00449  811 pslpKKRHRLDGLALSTTD-LESDAGRIA 838
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
923-1134 5.43e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 41.01  E-value: 5.43e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979  923 SSRGPSQNPPSSTDTVWSRQNSVRRASTGAEEQRLPRGSSGSSSTRPGRDVPLQPRGSFKKPSAKPLRNLPRQKPEENK- 1001
Cdd:PRK12323  366 GQSGGGAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPg 445
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979 1002 -TCRAHSEGPESPKEEPKTPSVPSVPHELPRVPSFARNTVASSSRSMRTDLPPVAKAPGITRTVSQrqlrvkgDPEDAAP 1080
Cdd:PRK12323  446 gAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAP-------AQPDAAP 518
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 767932979 1081 K--DSSTLRRASSARAPKKRPESAEGPSAnTEAPLKARGAGERASLRRKDSSRTTL 1134
Cdd:PRK12323  519 AgwVAESIPDPATADPDDAFETLAPAPAA-APAPRAAAATEPVVAPRPPRASASGL 573
PHA03247 PHA03247
large tegument protein UL36; Provisional
816-1055 5.47e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 41.08  E-value: 5.47e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979  816 GDSQVSSNPTSSPPGEAPAPVSVDSEPsckGGLPRDKPTKRKDVVAPKRGSLKEASPGA--SKPGSARRSQGAVAKSVRT 893
Cdd:PHA03247  250 GDIAAPAPPPVVGEGADRAPETARGAT---GPPPPPEAAAPNGAAAPPDGVWGAALAGAplALPAPPDPPPPAPAGDAEE 326
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979  894 lTASENESMRKVMPITKSSRGAGWRRPElsSRGPSQNPPSSTDTVWSRQNSVRRASTGAEEQRLPRGSSGSSSTRPGRDV 973
Cdd:PHA03247  327 -EDDEDGAMEVVSPLPRPRQHYPLGFPK--RRRPTWTPPSSLEDLSAGRHHPKRASLPTRKRRSARHAATPFARGPGGDD 403
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979  974 plQPRGSFKKPSAKPLRNLP-----RQKPEENKTCRAHSEGPESPKEEP-KTPSVPSVPHELPrVPSFARNTVASSSRSM 1047
Cdd:PHA03247  404 --QTRPAAPVPASVPTPAPTpvpasAPPPPATPLPSAEPGSDDGPAPPPeRQPPAPATEPAPD-DPDDATRKALDALRER 480

                  ....*...
gi 767932979 1048 RTDLPPVA 1055
Cdd:PHA03247  481 RPPEPPGA 488
PHA03378 PHA03378
EBNA-3B; Provisional
973-1143 8.05e-03

EBNA-3B; Provisional


Pssm-ID: 223065 [Multi-domain]  Cd Length: 991  Bit Score: 40.44  E-value: 8.05e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979  973 VPLQPRgsfkkpSAKPLRNLPRQKPEENKTCRAHSEGPESPKEEPKTPSVPSVPHELPRVPSFARNTVASSSRSMRTDLP 1052
Cdd:PHA03378  672 IPYQPS------PTGANTMLPIQWAPGTMQPPPRAPTPMRPPAAPPGRAQRPAAATGRARPPAAAPGRARPPAAAPGRAR 745
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767932979 1053 PVAKAPGITRTVSQRQLRVKgdPEDAAPKDSSTLRRASSARAPKKRPESAEGPSANTEAPLKARGAGERASLRRKDSSRT 1132
Cdd:PHA03378  746 PPAAAPGRARPPAAAPGRAR--PPAAAPGAPTPQPPPQAPPAPQQRPRGAPTPQPPPQAGPTSMQLMPRAAPGQQGPTKQ 823
                         170
                  ....*....|.
gi 767932979 1133 TLGRILNPLRK 1143
Cdd:PHA03378  824 ILRQLLTGGVK 834
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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