|
Name |
Accession |
Description |
Interval |
E-value |
| KISc_CENP_E |
cd01374 |
Kinesin motor domain, CENP-E/KIP2-like subgroup; Kinesin motor domain, CENP-E/KIP2-like ... |
6-329 |
3.80e-171 |
|
Kinesin motor domain, CENP-E/KIP2-like subgroup; Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.
Pssm-ID: 276825 [Multi-domain] Cd Length: 321 Bit Score: 528.83 E-value: 3.80e-171
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 6 AVAVCVRVRPLNSREESLGEtaQVYWKTDNNVIYQVD-GSKSFNFDRVFHGNETTKNVYEEIAAPIIDSAIQGYNGTIFA 84
Cdd:cd01374 1 KITVTVRVRPLNSREIGINE--QVAWEIDNDTIYLVEpPSTSFTFDHVFGGDSTNREVYELIAKPVVKSALEGYNGTIFA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 85 YGQTASGKTYTMMGSEDHLGVIPRAIHDIFQKIKKFPDREFLLRVSYMEIYNETITDLLCGTqkMKPLIIREDVNRNVYV 164
Cdd:cd01374 79 YGQTSSGKTFTMSGDEDEPGIIPLAIRDIFSKIQDTPDREFLLRVSYLEIYNEKINDLLSPT--SQNLKIRDDVEKGVYV 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 165 ADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGEPsnCEGSVKVSHLNLVDLAGSERAAQ 244
Cdd:cd01374 157 AGLTEEIVSSPEHALSLIARGEKNRHVGETDMNERSSRSHTIFRITIESSERGEL--EEGTVRVSTLNLIDLAGSERAAQ 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 245 TGAAGVRLKEGCNINRSLFILGQVIKKLSDGQVGGFINYRDSKLTRILQNSLGGNAKTRIICTITPVS--FDETLTALQF 322
Cdd:cd01374 235 TGAAGVRRKEGSHINKSLLTLGTVISKLSEGKVGGHIPYRDSKLTRILQPSLGGNSRTAIICTITPAEshVEETLNTLKF 314
|
....*..
gi 767930923 323 ASTAKYM 329
Cdd:cd01374 315 ASRAKKI 321
|
|
| KISc |
smart00129 |
Kinesin motor, catalytic domain. ATPase; Microtubule-dependent molecular motors that play ... |
6-336 |
3.72e-143 |
|
Kinesin motor, catalytic domain. ATPase; Microtubule-dependent molecular motors that play important roles in intracellular transport of organelles and in cell division.
Pssm-ID: 214526 [Multi-domain] Cd Length: 335 Bit Score: 449.72 E-value: 3.72e-143
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 6 AVAVCVRVRPLNSREESLGETAQVYW------KTDNNVIYQVDGSKSFNFDRVFHGNETTKNVYEEIAAPIIDSAIQGYN 79
Cdd:smart00129 1 NIRVVVRVRPLNKREKSRKSPSVVPFpdkvgkTLTVRSPKNRQGEKKFTFDKVFDATASQEDVFEETAAPLVDSVLEGYN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 80 GTIFAYGQTASGKTYTMMGSEDHLGVIPRAIHDIFQKIKKF-PDREFLLRVSYMEIYNETITDLLCGTQKmkPLIIREDV 158
Cdd:smart00129 81 ATIFAYGQTGSGKTYTMIGTPDSPGIIPRALKDLFEKIDKReEGWQFSVKVSYLEIYNEKIRDLLNPSSK--KLEIREDE 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 159 NRNVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGEPSnceGSVKVSHLNLVDLAG 238
Cdd:smart00129 159 KGGVYVKGLTEISVSSFEEVYNLLEKGNKNRTVAATKMNEESSRSHAVFTITVEQKIKNSSS---GSGKASKLNLVDLAG 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 239 SERAAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDGQVGGFINYRDSKLTRILQNSLGGNAKTRIICTITP--VSFDET 316
Cdd:smart00129 236 SERAKKTGAEGDRLKEAGNINKSLSALGNVINALAQHSKSRHIPYRDSKLTRLLQDSLGGNSKTLMIANVSPssSNLEET 315
|
330 340
....*....|....*....|
gi 767930923 317 LTALQFASTAKYMKNTPYVN 336
Cdd:smart00129 316 LSTLRFASRAKEIKNKPIVN 335
|
|
| Kinesin |
pfam00225 |
Kinesin motor domain; |
12-327 |
7.71e-139 |
|
Kinesin motor domain;
Pssm-ID: 459720 [Multi-domain] Cd Length: 326 Bit Score: 437.00 E-value: 7.71e-139
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 12 RVRPLNSREESLGETAQVY------WKTDNNVIYQVDGSKSFNFDRVFHGNETTKNVYEEIAAPIIDSAIQGYNGTIFAY 85
Cdd:pfam00225 1 RVRPLNEREKERGSSVIVSvesvdsETVESSHLTNKNRTKTFTFDKVFDPEATQEDVYEETAKPLVESVLEGYNVTIFAY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 86 GQTASGKTYTMMGSEDHLGVIPRAIHDIFQKIKKFPDR-EFLLRVSYMEIYNETITDLLCGTQKMK-PLIIREDVNRNVY 163
Cdd:pfam00225 81 GQTGSGKTYTMEGSDEQPGIIPRALEDLFDRIQKTKERsEFSVKVSYLEIYNEKIRDLLSPSNKNKrKLRIREDPKKGVY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 164 VADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGEPSncEGSVKVSHLNLVDLAGSERAA 243
Cdd:pfam00225 161 VKGLTEVEVSSAEEVLELLQLGNKNRTVAATKMNEESSRSHAIFTITVEQRNRSTGG--EESVKTGKLNLVDLAGSERAS 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 244 QTGAA-GVRLKEGCNINRSLFILGQVIKKLSDGQvGGFINYRDSKLTRILQNSLGGNAKTRIICTITPVS--FDETLTAL 320
Cdd:pfam00225 239 KTGAAgGQRLKEAANINKSLSALGNVISALADKK-SKHIPYRDSKLTRLLQDSLGGNSKTLMIANISPSSsnYEETLSTL 317
|
....*..
gi 767930923 321 QFASTAK 327
Cdd:pfam00225 318 RFASRAK 324
|
|
| KISc |
cd00106 |
Kinesin motor domain; Kinesin motor domain. This catalytic (head) domain has ATPase activity ... |
6-327 |
1.02e-136 |
|
Kinesin motor domain; Kinesin motor domain. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type), in some its is found in the middle (M-type), or C-terminal (C-type). N-type and M-type kinesins are (+) end-directed motors, while C-type kinesins are (-) end-directed motors, i.e. they transport cargo towards the (-) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.
Pssm-ID: 276812 [Multi-domain] Cd Length: 326 Bit Score: 430.91 E-value: 1.02e-136
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 6 AVAVCVRVRPLNSREeslGETAQVYWKTDNNVIYQVD-------GSKSFNFDRVFHGNETTKNVYEEIAAPIIDSAIQGY 78
Cdd:cd00106 1 NVRVAVRVRPLNGRE---ARSAKSVISVDGGKSVVLDppknrvaPPKTFAFDAVFDSTSTQEEVYEGTAKPLVDSALEGY 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 79 NGTIFAYGQTASGKTYTMMGS-EDHLGVIPRAIHDIFQKIKKFP--DREFLLRVSYMEIYNETITDLLCGTQKmKPLIIR 155
Cdd:cd00106 78 NGTIFAYGQTGSGKTYTMLGPdPEQRGIIPRALEDIFERIDKRKetKSSFSVSASYLEIYNEKIYDLLSPVPK-KPLSLR 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 156 EDVNRNVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKgepSNCEGSVKVSHLNLVD 235
Cdd:cd00106 157 EDPKRGVYVKGLTEVEVGSLEDALELLDAGNKNRTTASTNMNEHSSRSHAVFTIHVKQRNR---EKSGESVTSSKLNLVD 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 236 LAGSERAAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDGQvGGFINYRDSKLTRILQNSLGGNAKTRIICTITP--VSF 313
Cdd:cd00106 234 LAGSERAKKTGAEGDRLKEGGNINKSLSALGKVISALADGQ-NKHIPYRDSKLTRLLQDSLGGNSKTIMIACISPssENF 312
|
330
....*....|....
gi 767930923 314 DETLTALQFASTAK 327
Cdd:cd00106 313 EETLSTLRFASRAK 326
|
|
| KISc_KIF4 |
cd01372 |
Kinesin motor domain, KIF4-like subfamily; Kinesin motor domain, KIF4-like subfamily. Members ... |
6-330 |
2.95e-106 |
|
Kinesin motor domain, KIF4-like subfamily; Kinesin motor domain, KIF4-like subfamily. Members of this group seem to perform a variety of functions, and have been implicated in neuronal organelle transport and chromosome segregation during mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.
Pssm-ID: 276823 [Multi-domain] Cd Length: 341 Bit Score: 343.93 E-value: 2.95e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 6 AVAVCVRVRPLNSREESLGETAQVYWkTDNNVIYQVDGSKSFNFDRVFHGNETTKNVYEEIAAPIIDSAIQGYNGTIFAY 85
Cdd:cd01372 2 SVRVAVRVRPLLPKEIIEGCRICVSF-VPGEPQVTVGTDKSFTFDYVFDPSTEQEEVYNTCVAPLVDGLFEGYNATVLAY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 86 GQTASGKTYTMMGS------EDHLGVIPRAIHDIFQKIKKFPDR-EFLLRVSYMEIYNETITDLLC-GTQKMKPLIIRED 157
Cdd:cd01372 81 GQTGSGKTYTMGTAytaeedEEQVGIIPRAIQHIFKKIEKKKDTfEFQLKVSFLEIYNEEIRDLLDpETDKKPTISIRED 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 158 VNRNVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGEPSNC-----EGSVKVSHLN 232
Cdd:cd01372 161 SKGGITIVGLTEVTVLSAEDMMSCLEQGSLSRTTASTAMNSQSSRSHAIFTITLEQTKKNGPIAPmsaddKNSTFTSKFH 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 233 LVDLAGSERAAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDGQ-VGGFINYRDSKLTRILQNSLGGNAKTRIICTITPV 311
Cdd:cd01372 241 FVDLAGSERLKRTGATGDRLKEGISINSGLLALGNVISALGDESkKGAHVPYRDSKLTRLLQDSLGGNSHTLMIACVSPA 320
|
330 340
....*....|....*....|.
gi 767930923 312 S--FDETLTALQFASTAKYMK 330
Cdd:cd01372 321 DsnFEETLNTLKYANRARNIK 341
|
|
| KISc_KIF3 |
cd01371 |
Kinesin motor domain, kinesins II or KIF3_like proteins; Kinesin motor domain, kinesins II or ... |
6-327 |
4.18e-100 |
|
Kinesin motor domain, kinesins II or KIF3_like proteins; Kinesin motor domain, kinesins II or KIF3_like proteins. Subgroup of kinesins, which form heterotrimers composed of 2 kinesins and one non-motor accessory subunit. Kinesins II play important roles in ciliary transport, and have been implicated in neuronal transport, melanosome transport, the secretory pathway, and mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In this group the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.
Pssm-ID: 276822 [Multi-domain] Cd Length: 334 Bit Score: 325.95 E-value: 4.18e-100
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 6 AVAVCVRVRPLNSREESLGETAQVYWKTDNNVIyQVDGS--------KSFNFDRVFHGNETTKNVYEEIAAPIIDSAIQG 77
Cdd:cd01371 2 NVKVVVRCRPLNGKEKAAGALQIVDVDEKRGQV-SVRNPkataneppKTFTFDAVFDPNSKQLDVYDETARPLVDSVLEG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 78 YNGTIFAYGQTASGKTYTMMG--SEDHL-GVIPRAIHDIFQKIKKFPD-REFLLRVSYMEIYNETITDLLcGTQKMKPLI 153
Cdd:cd01371 81 YNGTIFAYGQTGTGKTYTMEGkrEDPELrGIIPNSFAHIFGHIARSQNnQQFLVRVSYLEIYNEEIRDLL-GKDQTKRLE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 154 IREDVNRNVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGEPSncEGSVKVSHLNL 233
Cdd:cd01371 160 LKERPDTGVYVKDLSMFVVKNADEMEHVMNLGNKNRSVGATNMNEDSSRSHAIFTITIECSEKGEDG--ENHIRVGKLNL 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 234 VDLAGSERAAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDGQvGGFINYRDSKLTRILQNSLGGNAKTRIICTITPVS- 312
Cdd:cd01371 238 VDLAGSERQSKTGATGERLKEATKINLSLSALGNVISALVDGK-STHIPYRDSKLTRLLQDSLGGNSKTVMCANIGPADy 316
|
330
....*....|....*.
gi 767930923 313 -FDETLTALQFASTAK 327
Cdd:cd01371 317 nYDETLSTLRYANRAK 332
|
|
| KISc_KIF1A_KIF1B |
cd01365 |
Kinesin motor domain, KIF1_like proteins; Kinesin motor domain, KIF1_like proteins. KIF1A ... |
7-336 |
1.51e-97 |
|
Kinesin motor domain, KIF1_like proteins; Kinesin motor domain, KIF1_like proteins. KIF1A (Unc104) transports synaptic vesicles to the nerve terminal, KIF1B has been implicated in transport of mitochondria. Both proteins are expressed in neurons. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. In contrast to the majority of dimeric kinesins, most KIF1A/Unc104 kinesins are monomeric motors. A lysine-rich loop in KIF1A binds to the negatively charged C-terminus of tubulin and compensates for the lack of a second motor domain, allowing KIF1A to move processively.
Pssm-ID: 276816 [Multi-domain] Cd Length: 361 Bit Score: 319.68 E-value: 1.51e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 7 VAVCVRVRPLNSREESLGE-----------TAQVYWKTDNNVIYQVDGSKSFNFDRVF--HGNE-----TTKNVYEEIAA 68
Cdd:cd01365 3 VKVAVRVRPFNSREKERNSkcivqmsgketTLKNPKQADKNNKATREVPKSFSFDYSYwsHDSEdpnyaSQEQVYEDLGE 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 69 PIIDSAIQGYNGTIFAYGQTASGKTYTMMGSEDHLGVIPRAIHDIFQKIKKFPDRE--FLLRVSYMEIYNETITDLLCGT 146
Cdd:cd01365 83 ELLQHAFEGYNVCLFAYGQTGSGKSYTMMGTQEQPGIIPRLCEDLFSRIADTTNQNmsYSVEVSYMEIYNEKVRDLLNPK 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 147 QKMKP--LIIREDVNRNVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFrMILESREKGEPSNCEG 224
Cdd:cd01365 163 PKKNKgnLKVREHPVLGPYVEDLSKLAVTSYEDIQDLMDEGNKSRTVAATNMNDTSSRSHAVF-TIVLTQKRHDAETNLT 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 225 SVKVSHLNLVDLAGSERAAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDGQVGG------FINYRDSKLTRILQNSLGG 298
Cdd:cd01365 242 TEKVSKISLVDLAGSERASSTGATGDRLKEGANINKSLTTLGKVISALADMSSGKskkkssFIPYRDSVLTWLLKENLGG 321
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 767930923 299 NAKTRIICTITPVS--FDETLTALQFASTAKYMKNTPYVN 336
Cdd:cd01365 322 NSKTAMIAAISPADinYEETLSTLRYADRAKKIVNRAVVN 361
|
|
| KISc_KHC_KIF5 |
cd01369 |
Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup; Kinesin motor domain, ... |
7-327 |
3.38e-97 |
|
Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup; Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup. Members of this group have been associated with organelle transport. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.
Pssm-ID: 276820 [Multi-domain] Cd Length: 325 Bit Score: 317.35 E-value: 3.38e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 7 VAVCVRVRPLNSREESLGETAQVYWKTDNNV-IYQVDGSKSFNFDRVFHGNETTKNVYEEIAAPIIDSAIQGYNGTIFAY 85
Cdd:cd01369 4 IKVVCRFRPLNELEVLQGSKSIVKFDPEDTVvIATSETGKTFSFDRVFDPNTTQEDVYNFAAKPIVDDVLNGYNGTIFAY 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 86 GQTASGKTYTMMGS---EDHLGVIPRAIHDIFQKIKKFPDR-EFLLRVSYMEIYNETITDLLcGTQKmKPLIIREDVNRN 161
Cdd:cd01369 84 GQTSSGKTYTMEGKlgdPESMGIIPRIVQDIFETIYSMDENlEFHVKVSYFEIYMEKIRDLL-DVSK-TNLSVHEDKNRG 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 162 VYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESRekgepSNCEGSVKVSHLNLVDLAGSER 241
Cdd:cd01369 162 PYVKGATERFVSSPEEVLDVIDEGKSNRHVAVTNMNEESSRSHSIFLINVKQE-----NVETEKKKSGKLYLVDLAGSEK 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 242 AAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDGQvGGFINYRDSKLTRILQNSLGGNAKTRIICTITPVSFD--ETLTA 319
Cdd:cd01369 237 VSKTGAEGAVLDEAKKINKSLSALGNVINALTDGK-KTHIPYRDSKLTRILQDSLGGNSRTTLIICCSPSSYNesETLST 315
|
....*...
gi 767930923 320 LQFASTAK 327
Cdd:cd01369 316 LRFGQRAK 323
|
|
| KISc_C_terminal |
cd01366 |
Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins; Kinesin motor domain, ... |
12-324 |
3.07e-96 |
|
Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins; Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins. Ncd is a spindle motor protein necessary for chromosome segregation in meiosis. KIFC2/KIFC3-like kinesins have been implicated in motility of the Golgi apparatus as well as dentritic and axonal transport in neurons. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In this subgroup the motor domain is found at the C-terminus (C-type). C-type kinesins are (-) end-directed motors, i.e. they transport cargo towards the (-) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.
Pssm-ID: 276817 [Multi-domain] Cd Length: 329 Bit Score: 314.53 E-value: 3.07e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 12 RVRPLNSREESLGETAQVYWKTDNNVI---YQVDGSKSFNFDRVFHGNETTKNVYEEIAaPIIDSAIQGYNGTIFAYGQT 88
Cdd:cd01366 9 RVRPLLPSEENEDTSHITFPDEDGQTIeltSIGAKQKEFSFDKVFDPEASQEDVFEEVS-PLVQSALDGYNVCIFAYGQT 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 89 ASGKTYTMMGSEDHLGVIPRAIHDIFQKIKKFPDR--EFLLRVSYMEIYNETITDLLC-GTQKMKPLIIRED-VNRNVYV 164
Cdd:cd01366 88 GSGKTYTMEGPPESPGIIPRALQELFNTIKELKEKgwSYTIKASMLEIYNETIRDLLApGNAPQKKLEIRHDsEKGDTTV 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 165 ADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGEPSNCEGSvkvshLNLVDLAGSERAAQ 244
Cdd:cd01366 168 TNLTEVKVSSPEEVRQLLKKASKNRSTASTAMNEHSSRSHSVFILHISGRNLQTGEISVGK-----LNLVDLAGSERLNK 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 245 TGAAGVRLKEGCNINRSLFILGQVIKKLSDGQvgGFINYRDSKLTRILQNSLGGNAKTRIICTITPV--SFDETLTALQF 322
Cdd:cd01366 243 SGATGDRLKETQAINKSLSALGDVISALRQKQ--SHIPYRNSKLTYLLQDSLGGNSKTLMFVNISPAesNLNETLNSLRF 320
|
..
gi 767930923 323 AS 324
Cdd:cd01366 321 AS 322
|
|
| KISc_KIP3_like |
cd01370 |
Kinesin motor domain, KIP3-like subgroup; Kinesin motor domain, KIP3-like subgroup. The yeast ... |
9-327 |
1.15e-92 |
|
Kinesin motor domain, KIP3-like subgroup; Kinesin motor domain, KIP3-like subgroup. The yeast kinesin KIP3 plays a role in positioning the mitotic spindle. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.
Pssm-ID: 276821 [Multi-domain] Cd Length: 345 Bit Score: 305.04 E-value: 1.15e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 9 VCVRVRPLNSREESLG---------------------ETAQVYWKTDNNVIYQVDGSKSFNFDRVFHGNETTKNVYEEIA 67
Cdd:cd01370 4 VAVRVRPFSEKEKNEGfrrivkvmdnhmlvfdpkdeeDGFFHGGSNNRDRRKRRNKELKYVFDRVFDETSTQEEVYEETT 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 68 APIIDSAIQGYNGTIFAYGQTASGKTYTMMGSEDHLGVIPRAIHDIFQKIKKFPD-REFLLRVSYMEIYNETITDLLcgT 146
Cdd:cd01370 84 KPLVDGVLNGYNATVFAYGATGAGKTHTMLGTPQEPGLMVLTMKELFKRIESLKDeKEFEVSMSYLEIYNETIRDLL--N 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 147 QKMKPLIIREDVNRNVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGEPSNCEgsV 226
Cdd:cd01370 162 PSSGPLELREDAQNGIVVAGLTEHSPKSAEEILELLMKGNRNRTQEPTDANATSSRSHAVLQITVRQQDKTASINQQ--V 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 227 KVSHLNLVDLAGSERAAQTGAAGVRLKEGCNINRSLFILGQVIKKLSD-GQVGGFINYRDSKLTRILQNSLGGNAKTRII 305
Cdd:cd01370 240 RQGKLSLIDLAGSERASATNNRGQRLKEGANINRSLLALGNCINALADpGKKNKHIPYRDSKLTRLLKDSLGGNCRTVMI 319
|
330 340
....*....|....*....|....
gi 767930923 306 CTITP--VSFDETLTALQFASTAK 327
Cdd:cd01370 320 ANISPssSSYEETHNTLKYANRAK 343
|
|
| KISc_KLP2_like |
cd01373 |
Kinesin motor domain, KIF15-like subgroup; Kinesin motor domain, KIF15-like subgroup. Members ... |
6-339 |
2.57e-92 |
|
Kinesin motor domain, KIF15-like subgroup; Kinesin motor domain, KIF15-like subgroup. Members of this subgroup seem to play a role in mitosis and meiosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.
Pssm-ID: 276824 [Multi-domain] Cd Length: 347 Bit Score: 304.05 E-value: 2.57e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 6 AVAVCVRVRPLNSREESLGETAQVYWKTDNNVIYQVDGSKSFNFDRVFHGNETTKNVYEEIAAPIIDSAIQGYNGTIFAY 85
Cdd:cd01373 2 AVKVFVRIRPPAEREGDGEYGQCLKKLSSDTLVLHSKPPKTFTFDHVADSNTNQESVFQSVGKPIVESCLSGYNGTIFAY 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 86 GQTASGKTYTMMG-SEDHL-------GVIPRAIHDIFQKIKKFPDR-----EFLLRVSYMEIYNETITDLLCGTQkmKPL 152
Cdd:cd01373 82 GQTGSGKTYTMWGpSESDNesphglrGVIPRIFEYLFSLIQREKEKagegkSFLCKCSFLEIYNEQIYDLLDPAS--RNL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 153 IIREDVNRNVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGepsNCEGSVKVSHLN 232
Cdd:cd01373 160 KLREDIKKGVYVENLVEEYVTSAEDVYQVLSKGWSNRKVAATSMNRESSRSHAVFTCTIESWEKK---ACFVNIRTSRLN 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 233 LVDLAGSERAAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDGQVGGF--INYRDSKLTRILQNSLGGNAKTRIICTITP 310
Cdd:cd01373 237 LVDLAGSERQKDTHAEGVRLKEAGNINKSLSCLGHVINALVDVAHGKQrhVCYRDSKLTFLLRDSLGGNAKTAIIANVHP 316
|
330 340 350
....*....|....*....|....*....|.
gi 767930923 311 VS--FDETLTALQFASTAKYMKNTPYVNEVS 339
Cdd:cd01373 317 SSkcFGETLSTLRFAQRAKLIKNKAVVNEDT 347
|
|
| KISc_BimC_Eg5 |
cd01364 |
Kinesin motor domain, BimC/Eg5 spindle pole proteins; Kinesin motor domain, BimC/Eg5 spindle ... |
7-337 |
5.46e-85 |
|
Kinesin motor domain, BimC/Eg5 spindle pole proteins; Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type), N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.
Pssm-ID: 276815 [Multi-domain] Cd Length: 353 Bit Score: 283.45 E-value: 5.46e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 7 VAVCVRVRPLNSREESLGETAQVYWKTDNNVI---YQVDGS----KSFNFDRVFHGNETTKNVYEEIAAPIIDSAIQGYN 79
Cdd:cd01364 4 IQVVVRCRPFNLRERKASSHSVVEVDPVRKEVsvrTGGLADksstKTYTFDMVFGPEAKQIDVYRSVVCPILDEVLMGYN 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 80 GTIFAYGQTASGKTYTMMGSE-----------DHLGVIPRAIHDIFQKIKKfPDREFLLRVSYMEIYNETITDLL-CGTQ 147
Cdd:cd01364 84 CTIFAYGQTGTGKTYTMEGDRspneeytweldPLAGIIPRTLHQLFEKLED-NGTEYSVKVSYLEIYNEELFDLLsPSSD 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 148 KMKPLIIREDVNR--NVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGepSNCEGS 225
Cdd:cd01364 163 VSERLRMFDDPRNkrGVIIKGLEEITVHNKDEVYQILEKGAAKRKTAATLMNAQSSRSHSVFSITIHIKETT--IDGEEL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 226 VKVSHLNLVDLAGSERAAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDGqvGGFINYRDSKLTRILQNSLGGNAKTRII 305
Cdd:cd01364 241 VKIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVER--APHVPYRESKLTRLLQDSLGGRTKTSII 318
|
330 340 350
....*....|....*....|....*....|....
gi 767930923 306 CTITP--VSFDETLTALQFASTAKYMKNTPYVNE 337
Cdd:cd01364 319 ATISPasVNLEETLSTLEYAHRAKNIKNKPEVNQ 352
|
|
| KISc_KIF23_like |
cd01368 |
Kinesin motor domain, KIF23-like subgroup; Kinesin motor domain, KIF23-like subgroup. Members ... |
7-327 |
2.68e-76 |
|
Kinesin motor domain, KIF23-like subgroup; Kinesin motor domain, KIF23-like subgroup. Members of this group may play a role in mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.
Pssm-ID: 276819 [Multi-domain] Cd Length: 345 Bit Score: 258.09 E-value: 2.68e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 7 VAVCVRVRPLNSREESLGETAQVYWKTDNNVIYQV-DGSKS-------------FNFDRVFHGNETTKNVYEEIAAPIID 72
Cdd:cd01368 3 VKVYLRVRPLSKDELESEDEGCIEVINSTTVVLHPpKGSAAnksernggqketkFSFSKVFGPNTTQKEFFQGTALPLVQ 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 73 SAIQGYNGTIFAYGQTASGKTYTMMGSEDHLGVIPRAIHDIFQKIKkfpdrEFLLRVSYMEIYNETITDLL-----CGTQ 147
Cdd:cd01368 83 DLLHGKNGLLFTYGVTNSGKTYTMQGSPGDGGILPRSLDVIFNSIG-----GYSVFVSYIEIYNEYIYDLLepspsSPTK 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 148 KMKPLIIREDVNRNVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMIL---ESREKGEPSNCEG 224
Cdd:cd01368 158 KRQSLRLREDHNGNMYVAGLTEIEVKSTEEARKVLKRGQKNRSVAGTKLNRESSRSHSVFTIKLvqaPGDSDGDVDQDKD 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 225 SVKVSHLNLVDLAGSERAAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDGQVGGFIN---YRDSKLTRILQNSLGGNAK 301
Cdd:cd01368 238 QITVSQLSLVDLAGSERTSRTQNTGERLKEAGNINTSLMTLGTCIEVLRENQLQGTNKmvpFRDSKLTHLFQNYFDGEGK 317
|
330 340
....*....|....*....|....*...
gi 767930923 302 TRIICTITPVS--FDETLTALQFASTAK 327
Cdd:cd01368 318 ASMIVNVNPCAsdYDETLHVMKFSAIAQ 345
|
|
| KISc_KIF9_like |
cd01375 |
Kinesin motor domain, KIF9-like subgroup; Kinesin motor domain, KIF9-like subgroup; might play ... |
6-327 |
2.27e-75 |
|
Kinesin motor domain, KIF9-like subgroup; Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.
Pssm-ID: 276826 [Multi-domain] Cd Length: 334 Bit Score: 254.81 E-value: 2.27e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 6 AVAVCVRVRPLNSREESL------GETAQVYWKTD--NNVIYQVDGSKSFNFDRVFHgNETTKNVYEEIAAPIIDSAIQG 77
Cdd:cd01375 1 KVQAFVRVRPTDDFAHEMikygedGKSISIHLKKDlrRGVVNNQQEDWSFKFDGVLH-NASQELVYETVAKDVVSSALAG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 78 YNGTIFAYGQTASGKTYTMMGSED---HLGVIPRAIHDIFQKIKKFPDREFLLRVSYMEIYNETITDLLCGT----QKMK 150
Cdd:cd01375 80 YNGTIFAYGQTGAGKTFTMTGGTEnykHRGIIPRALQQVFRMIEERPTKAYTVHVSYLEIYNEQLYDLLSTLpyvgPSVT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 151 PLIIREDVNRNVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKgEPSncEGSVKVSH 230
Cdd:cd01375 160 PMTILEDSPQNIFIKGLSLHLTSQEEEALSLLFLGETNRIIASHTMNKNSSRSHCIFTIHLEAHSR-TLS--SEKYITSK 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 231 LNLVDLAGSERAAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDgQVGGFINYRDSKLTRILQNSLGGNAKTRIICTIT- 309
Cdd:cd01375 237 LNLVDLAGSERLSKTGVEGQVLKEATYINKSLSFLEQAIIALSD-KDRTHVPFRQSKLTHVLRDSLGGNCNTVMVANIYg 315
|
330
....*....|....*....
gi 767930923 310 -PVSFDETLTALQFASTAK 327
Cdd:cd01375 316 eAAQLEETLSTLRFASRVK 334
|
|
| KIP1 |
COG5059 |
Kinesin-like protein [Cytoskeleton]; |
34-339 |
8.84e-67 |
|
Kinesin-like protein [Cytoskeleton];
Pssm-ID: 227392 [Multi-domain] Cd Length: 568 Bit Score: 238.10 E-value: 8.84e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 34 DNNVIYQVDGSKSFNFDRVFHGNETTKNVYEEIAAPIIDSAIQGYNGTIFAYGQTASGKTYTMMGSEDHLGVIPRAIHDI 113
Cdd:COG5059 45 KSHVSLEKSKEGTYAFDKVFGPSATQEDVYEETIKPLIDSLLLGYNCTVFAYGQTGSGKTYTMSGTEEEPGIIPLSLKEL 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 114 FQKIKKFPDR-EFLLRVSYMEIYNETITDLLcgTQKMKPLIIREDVNRNVYVADLTEEVVYTSEMALKWITKGEKSRHYG 192
Cdd:COG5059 125 FSKLEDLSMTkDFAVSISYLEIYNEKIYDLL--SPNEESLNIREDSLLGVKVAGLTEKHVSSKEEILDLLRKGEKNRTTA 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 193 ETKMNQRSSRSHTIFRMILESREKGEPSNCEGSvkvshLNLVDLAGSERAAQTGAAGVRLKEGCNINRSLFILGQVIKKL 272
Cdd:COG5059 203 STEINDESSRSHSIFQIELASKNKVSGTSETSK-----LSLVDLAGSERAARTGNRGTRLKEGASINKSLLTLGNVINAL 277
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 767930923 273 SDGQVGGFINYRDSKLTRILQNSLGGNAKTRIICTITP--VSFDETLTALQFASTAKYMKNTPYVNEVS 339
Cdd:COG5059 278 GDKKKSGHIPYRESKLTRLLQDSLGGNCNTRVICTISPssNSFEETINTLKFASRAKSIKNKIQVNSSS 346
|
|
| KISc_KIF2_like |
cd01367 |
Kinesin motor domain, KIF2-like group; Kinesin motor domain, KIF2-like group. KIF2 is a ... |
9-327 |
1.99e-66 |
|
Kinesin motor domain, KIF2-like group; Kinesin motor domain, KIF2-like group. KIF2 is a protein expressed in neurons, which has been associated with axonal transport and neuron development; alternative splice forms have been implicated in lysosomal translocation. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In this subgroup the motor domain is found in the middle (M-type) of the protein chain. M-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second (KIF2 may be slower). To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.
Pssm-ID: 276818 [Multi-domain] Cd Length: 328 Bit Score: 228.72 E-value: 1.99e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 9 VCVRVRPLNSREESLGETAQVYWKTDNNVI-----YQVDGSK-----SFNFDRVFHGNETTKNVYEEIAAPIIDSAIQGY 78
Cdd:cd01367 4 VCVRKRPLNKKEVAKKEIDVVSVPSKLTLIvhepkLKVDLTKyienhTFRFDYVFDESSSNETVYRSTVKPLVPHIFEGG 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 79 NGTIFAYGQTASGKTYTMMGS----EDHLGVIPRAIHDIFQKIKKFPDREFL-LRVSYMEIYNETITDLLcgtQKMKPLI 153
Cdd:cd01367 84 KATCFAYGQTGSGKTYTMGGDfsgqEESKGIYALAARDVFRLLNKLPYKDNLgVTVSFFEIYGGKVFDLL---NRKKRVR 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 154 IREDVNRNVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKgepsNCEGSVkvshLNL 233
Cdd:cd01367 161 LREDGKGEVQVVGLTEKPVTSAEELLELIESGSSLRTTGQTSANSQSSRSHAILQIILRDRGT----NKLHGK----LSF 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 234 VDLAGSERAAQTGAAGV-RLKEGCNINRSLFILGQVIKKLSDGQVggFINYRDSKLTRILQNSL-GGNAKTRIICTITP- 310
Cdd:cd01367 233 VDLAGSERGADTSSADRqTRMEGAEINKSLLALKECIRALGQNKA--HIPFRGSKLTQVLKDSFiGENSKTCMIATISPg 310
|
330
....*....|....*...
gi 767930923 311 -VSFDETLTALQFASTAK 327
Cdd:cd01367 311 aSSCEHTLNTLRYADRVK 328
|
|
| KISc_KID_like |
cd01376 |
Kinesin motor domain, KIF22/Kid-like subgroup; Kinesin motor domain, KIF22/Kid-like subgroup. ... |
7-327 |
3.80e-65 |
|
Kinesin motor domain, KIF22/Kid-like subgroup; Kinesin motor domain, KIF22/Kid-like subgroup. Members of this group might play a role in regulating chromosomal movement along microtubules in mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.
Pssm-ID: 276827 [Multi-domain] Cd Length: 319 Bit Score: 225.07 E-value: 3.80e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 7 VAVCVRVRPLNSREESLGETAQVYWkTDNNVIYQVDG-----SKSFNFDRVFHGNETTKNVYEEIAAPIIDSAIQGYNGT 81
Cdd:cd01376 2 VRVAVRVRPFVDGTAGASDPSCVSG-IDSCSVELADPrnhgeTLKYQFDAFYGEESTQEDIYAREVQPIVPHLLEGQNAT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 82 IFAYGQTASGKTYTMMGSEDHLGVIPRAIHDIFQKIKKFPDREFLLrVSYMEIYNETITDLLcgTQKMKPLIIREDVNRN 161
Cdd:cd01376 81 VFAYGSTGAGKTFTMLGSPEQPGLMPLTVMDLLQMTRKEAWALSFT-MSYLEIYQEKILDLL--EPASKELVIREDKDGN 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 162 VYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREkgepSNCEGSVKVSHLNLVDLAGSER 241
Cdd:cd01376 158 ILIPGLSSKPIKSMAEFEEAFLPASKNRTVAATRLNDNSSRSHAVLLIKVDQRE----RLAPFRQRTGKLNLIDLAGSED 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 242 AAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDGQvgGFINYRDSKLTRILQNSLGGNAKTRIICTITP--VSFDETLTA 319
Cdd:cd01376 234 NRRTGNEGIRLKESGAINSSLFVLSKVVNALNKNL--PRIPYRDSKLTRLLQDSLGGGSRCIMVANIAPerTFYQDTLST 311
|
....*...
gi 767930923 320 LQFASTAK 327
Cdd:cd01376 312 LNFAARSR 319
|
|
| PLN03188 |
PLN03188 |
kinesin-12 family protein; Provisional |
7-362 |
2.32e-63 |
|
kinesin-12 family protein; Provisional
Pssm-ID: 215621 [Multi-domain] Cd Length: 1320 Bit Score: 239.84 E-value: 2.32e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 7 VAVCVRVRPLNSREEslGETAQVYWKTDNNVIyqvdGSKSFNFDRVFHGNETTKNVYEEIAAPIIDSAIQGYNGTIFAYG 86
Cdd:PLN03188 100 VKVIVRMKPLNKGEE--GEMIVQKMSNDSLTI----NGQTFTFDSIADPESTQEDIFQLVGAPLVENCLAGFNSSVFAYG 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 87 QTASGKTYTMMG-----SEDHL-----GVIPRAIHDIFQKIK----KFPDRE--FLLRVSYMEIYNETITDLLCGTQKmk 150
Cdd:PLN03188 174 QTGSGKTYTMWGpanglLEEHLsgdqqGLTPRVFERLFARINeeqiKHADRQlkYQCRCSFLEIYNEQITDLLDPSQK-- 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 151 PLIIREDVNRNVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGEpSNCEGSVKVSH 230
Cdd:PLN03188 252 NLQIREDVKSGVYVENLTEEYVKTMKDVTQLLIKGLSNRRTGATSINAESSRSHSVFTCVVESRCKSV-ADGLSSFKTSR 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 231 LNLVDLAGSERAAQTGAAGVRLKEGCNINRSLFILGQVIKKLSD-GQVGG--FINYRDSKLTRILQNSLGGNAKTRIICT 307
Cdd:PLN03188 331 INLVDLAGSERQKLTGAAGDRLKEAGNINRSLSQLGNLINILAEiSQTGKqrHIPYRDSRLTFLLQESLGGNAKLAMVCA 410
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 767930923 308 ITPVSF--DETLTALQFASTAKYMKNTPYVNEVSTDEalLKRYRKEIMDLKKQLEEV 362
Cdd:PLN03188 411 ISPSQSckSETFSTLRFAQRAKAIKNKAVVNEVMQDD--VNFLREVIRQLRDELQRV 465
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
828-1715 |
3.06e-24 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 112.07 E-value: 3.06e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 828 DFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQE---RLNEMEQ----LKEQLENRD 900
Cdd:TIGR02168 236 ELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYAlanEISRLEQqkqiLRERLANLE 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 901 STLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIHDTVNMNIDTQEQLRNALESLKQHQETI 980
Cdd:TIGR02168 316 RQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQI 395
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 981 NTLKSKISEEVSRNLHMEENtgetKDEFQQKMVGIDKKQDLEAKNTQTLTADVKDNEIIEQQRKIFSLIQEKNELQQMLE 1060
Cdd:TIGR02168 396 ASLNNEIERLEARLERLEDR----RERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELE 471
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1061 sviaEKEQLKTDLKENIEMTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLaEVEEKLKeksqqlqekq 1140
Cdd:TIGR02168 472 ----EAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSGILGVLSELI-SVDEGYE---------- 536
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1141 qqllnvqeemsemqkkiNEIENLKNElknkelTLEHMETERLELAQKLNENYEEvksitkerkvlKELQKSFETERDHLR 1220
Cdd:TIGR02168 537 -----------------AAIEAALGG------RLQAVVVENLNAAKKAIAFLKQ-----------NELGRVTFLPLDSIK 582
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1221 GyiREIEATGLQTKEELKIAHIHLKEHQETIDELRRSVSEKTAQIINTQDLEKShtklqeeipvLHEEQELLPNVKEVSE 1300
Cdd:TIGR02168 583 G--TEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLVVDDLDNA----------LELAKKLRPGYRIVTL 650
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1301 TQETMNELELLTEQSTTKDSTTLARiEMERLRLNEKFQESQEEIKSLTKERdnlktikEALEVKHDQLKEHIRETLAKIQ 1380
Cdd:TIGR02168 651 DGDLVRPGGVITGGSAKTNSSILER-RREIEELEEKIEELEEKIAELEKAL-------AELRKELEELEEELEQLRKELE 722
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1381 ESQskQEQSLNMKEKDNETTKIVSEMEQFKPKDSALLRIEIEMLGLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQ 1460
Cdd:TIGR02168 723 ELS--RQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKA 800
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1461 LKENIKEIVAKHLETEEElkvahccLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQFNiKQI 1540
Cdd:TIGR02168 801 LREALDELRAELTLLNEE-------AANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIE-ELE 872
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1541 SEVQEKVNELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEivakm 1620
Cdd:TIGR02168 873 SELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSE----- 947
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1621 kesqekEYQFLKMTAVNETQEKMCEIEHLKEQfetqklnLENIETENIRLTQILHENLEEMRSVTKERDDLRSVEETLkv 1700
Cdd:TIGR02168 948 ------EYSLTLEEAEALENKIEDDEEEARRR-------LKRLENKIKELGPVNLAAIEEYEELKERYDFLTAQKEDL-- 1012
|
890
....*....|....*
gi 767930923 1701 erDQLKENLRETITR 1715
Cdd:TIGR02168 1013 --TEAKETLEEAIEE 1025
|
|
| Motor_domain |
cd01363 |
Myosin and Kinesin motor domain; Myosin and Kinesin motor domain. These ATPases belong to the ... |
9-269 |
4.54e-24 |
|
Myosin and Kinesin motor domain; Myosin and Kinesin motor domain. These ATPases belong to the P-loop NTPase family and provide the driving force in myosin and kinesin mediated processes. Some of the names do not match with what is given in the sequence list. This is because they are based on the current nomenclature by Kollmar/Sebe-Pedros.
Pssm-ID: 276814 [Multi-domain] Cd Length: 170 Bit Score: 101.27 E-value: 4.54e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 9 VCVRVRPLNSREESlgetaqvywktdnnviyqvDGSKSFNFDRVFHGNETTKNVYEeIAAPIIDSAIQGYNG-TIFAYGQ 87
Cdd:cd01363 1 VLVRVNPFKELPIY-------------------RDSKIIVFYRGFRRSESQPHVFA-IADPAYQSMLDGYNNqSIFAYGE 60
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 88 TASGKTYTMMgsedhlGVIPRAIHDIFQKIKKfpdrefllrvsymeiynetitdllcgtqkmkpliiredvNRNVYVADL 167
Cdd:cd01363 61 SGAGKTETMK------GVIPYLASVAFNGINK---------------------------------------GETEGWVYL 95
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 168 TEEVVYTSEMALKWITKGEKSRHyGETKMNQRSSRSHTIFRMilesrekgepsncegsvkvshlnLVDLAGSERaaqtga 247
Cdd:cd01363 96 TEITVTLEDQILQANPILEAFGN-AKTTRNENSSRFGKFIEI-----------------------LLDIAGFEI------ 145
|
250 260
....*....|....*....|..
gi 767930923 248 agvrlkegcnINRSLFILGQVI 269
Cdd:cd01363 146 ----------INESLNTLMNVL 157
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1332-2029 |
3.41e-21 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 102.06 E-value: 3.41e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1332 RLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQeqslnmkekdNETTKIVSEMEQfkp 1411
Cdd:TIGR02168 236 ELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKEL----------YALANEISRLEQ--- 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1412 kdsallRIEIemlgLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEE 1491
Cdd:TIGR02168 303 ------QKQI----LRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELES 372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1492 TINELRVNLSEKETEISTIQKQLEAINdklqNKIQEIYEKEEQFNIKQISEVQEKVNELKQFKEHRKAKDSAlqSIESKM 1571
Cdd:TIGR02168 373 RLEELEEQLETLRSKVAQLELQIASLN----NEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQA--ELEELE 446
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1572 LELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKE--NTKEIVAKMKESQEKEYQFLKmTAVNETQEKMCEIEHL 1649
Cdd:TIGR02168 447 EELEELQEELERLEEALEELREELEEAEQALDAAERELAQlqARLDSLERLQENLEGFSEGVK-ALLKNQSGLSGILGVL 525
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1650 KEQFETQK---LNLENIETEniRLTQILHENLEEMR----SVTKERDDLRSVEETLKVERDQLKENLRETITRDLEKQEE 1722
Cdd:TIGR02168 526 SELISVDEgyeAAIEAALGG--RLQAVVVENLNAAKkaiaFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGV 603
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1723 LKIVHMHLKEHQETIDKLRG--IVSEKTNEISNMQKDLEHSN--------------------DALKAQDLKIQEELRIAH 1780
Cdd:TIGR02168 604 AKDLVKFDPKLRKALSYLLGgvLVVDDLDNALELAKKLRPGYrivtldgdlvrpggvitggsAKTNSSILERRREIEELE 683
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1781 MHLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKdvnetqkkvsEMEQLKKQIKDQS 1860
Cdd:TIGR02168 684 EKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEA----------EVEQLEERIAQLS 753
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1861 LTLSKLEIENLNLAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKAR-----------DLEIQQELKTA 1929
Cdd:TIGR02168 754 KELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAEltllneeaanlRERLESLERRI 833
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1930 RMLSKEHKETV---DKLREKISEKTIQISDIQKDLDKSKDELQKKDRQNHQVKPEKRLLSDGQQHLTESLREKCSRIKEL 2006
Cdd:TIGR02168 834 AATERRLEDLEeqiEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSEL 913
|
730 740
....*....|....*....|...
gi 767930923 2007 LKRYSEMDDHyecLNRLSLDLEK 2029
Cdd:TIGR02168 914 RRELEELREK---LAQLELRLEG 933
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1082-1825 |
4.79e-21 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 101.67 E-value: 4.79e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1082 ENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIE 1161
Cdd:TIGR02168 222 LRELELALLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLE 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1162 N----LKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKERKVLKELQKSFETERDHLRGYIREIEATGLQTKEEL 1237
Cdd:TIGR02168 302 QqkqiLRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQL 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1238 KIAHIHLKEHQETIDELRRSVSEKTAQIintQDLEKSHTKLQEEIPVLHEEQELlPNVKEVSETQETMNELELLTEQSTT 1317
Cdd:TIGR02168 382 ETLRSKVAQLELQIASLNNEIERLEARL---ERLEDRRERLQQEIEELLKKLEE-AELKELQAELEELEEELEELQEELE 457
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1318 KDSTTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKE---------HIRETLAKIQESQSKQEQ 1388
Cdd:TIGR02168 458 RLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKAllknqsglsGILGVLSELISVDEGYEA 537
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1389 SLN----------MKEKDNETTKIVSEMEQ------------------FKPKDSALLRIEIEMLGLSKRLQESHDEMKSV 1440
Cdd:TIGR02168 538 AIEaalggrlqavVVENLNAAKKAIAFLKQnelgrvtflpldsikgteIQGNDREILKNIEGFLGVAKDLVKFDPKLRKA 617
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1441 AKEKDDLQRLQEVLQSESDQLKENIK---------EIVAKH--------------LETEEELKVAHCCLKEQEETINELR 1497
Cdd:TIGR02168 618 LSYLLGGVLVVDDLDNALELAKKLRPgyrivtldgDLVRPGgvitggsaktnssiLERRREIEELEEKIEELEEKIAELE 697
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1498 VNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEeqfniKQISEVQEKVNELKQFKEHRkakDSALQSIESKMLELTNR 1577
Cdd:TIGR02168 698 KALAELRKELEELEEELEQLRKELEELSRQISALR-----KDLARLEAEVEQLEERIAQL---SKELTELEAEIEELEER 769
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1578 LQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKMKESQEK--EYQFLKMTAVNETQEKMCEIEHLKEQFET 1655
Cdd:TIGR02168 770 LEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEaaNLRERLESLERRIAATERRLEDLEEQIEE 849
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1656 QKLNLENIETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETITRDLEKQEELKIVHMHLKEHQE 1735
Cdd:TIGR02168 850 LSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLEL 929
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1736 TIDKLRGIVSEKTNEISNMQKDLEhsnDALKAQDLKIQEELRIAHMHLKEQQETIDKLRGI----------VSEKTDKLS 1805
Cdd:TIGR02168 930 RLEGLEVRIDNLQERLSEEYSLTL---EEAEALENKIEDDEEEARRRLKRLENKIKELGPVnlaaieeyeeLKERYDFLT 1006
|
810 820
....*....|....*....|
gi 767930923 1806 NMQKDLENSNAKLQEKIQEL 1825
Cdd:TIGR02168 1007 AQKEDLTEAKETLEEAIEEI 1026
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1063-1915 |
7.67e-20 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 97.83 E-value: 7.67e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1063 IAEKEQLKTDLKENIEMTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRlaEVEEKLKEKsqqlQEKQQQ 1142
Cdd:TIGR02169 165 VAEFDRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRREREKAERYQALLKEKREY--EGYELLKEK----EALERQ 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1143 LLNVQEEMSEMQKkinEIENLKNELKNKELTLEHMETERLELAQKLNENYEEvksitkERKVLKELQKSFETERDHLRGY 1222
Cdd:TIGR02169 239 KEAIERQLASLEE---ELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEE------EQLRVKEKIGELEAEIASLERS 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1223 IREIEATGLQTKEELKIAHIHLKEHQETIDELRRSVSEK-------TAQIINTQD-LEKSHTKLQEEIPVLHE-EQELLP 1293
Cdd:TIGR02169 310 IAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEErkrrdklTEEYAELKEeLEDLRAELEEVDKEFAEtRDELKD 389
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1294 NVKEVSETQETMNELEL----LTEQSTTKDStTLARIEMERLRLNEKFQESQEEIKSLTKE----RDNLKTIKEALEvKH 1365
Cdd:TIGR02169 390 YREKLEKLKREINELKReldrLQEELQRLSE-ELADLNAAIAGIEAKINELEEEKEDKALEikkqEWKLEQLAADLS-KY 467
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1366 DQLKEHIRETLAKIQESQSKQEQSLNMKEKdneTTKIVSEMEQFKPKDSALLRIEIE-MLGLSKRLQeSHDEMKSVAKEK 1444
Cdd:TIGR02169 468 EQELYDLKEEYDRVEKELSKLQRELAEAEA---QARASEERVRGGRAVEEVLKASIQgVHGTVAQLG-SVGERYATAIEV 543
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1445 DDLQRLQEVLQSESDQLKENIKEIVAKHLETE-----EELKVAHCCL-KEQEETINELRVNLSEKETEISTIQKQ----- 1513
Cdd:TIGR02169 544 AAGNRLNNVVVEDDAVAKEAIELLKRRKAGRAtflplNKMRDERRDLsILSEDGVIGFAVDLVEFDPKYEPAFKYvfgdt 623
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1514 -----LEA-----INDKLQNKIQEIYEK-------------EEQFNIKQISEVQEKVNELKQFKEHRKAKDSALQSIESK 1570
Cdd:TIGR02169 624 lvvedIEAarrlmGKYRMVTLEGELFEKsgamtggsraprgGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENR 703
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1571 MLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIvakmkeSQEKEYQFLKMTAVNEtqekmcEIEHLK 1650
Cdd:TIGR02169 704 LDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSL------EQEIENVKSELKELEA------RIEELE 771
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1651 EQFETQKLNLENIETENIRltQILHENLEEMRSVTKERDDLRSVEETLKVE---RDQLKENLRETITRDLEKQEELKIvh 1727
Cdd:TIGR02169 772 EDLHKLEEALNDLEARLSH--SRIPEIQAELSKLEEEVSRIEARLREIEQKlnrLTLEKEYLEKEIQELQEQRIDLKE-- 847
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1728 mHLKEHQETIDKLRGIVSEKTNEISNMQ---KDLEHSNDALKAQDLKIQEELRIAHMHLKEQQETIDKLRGIVSEktdkl 1804
Cdd:TIGR02169 848 -QIKSIEKEIENLNGKKEELEEELEELEaalRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSE----- 921
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1805 snmqkdlensnakLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQLKKQIKDQSLTLSKLEIENlNLAqklhenLEEM 1884
Cdd:TIGR02169 922 -------------LKAKLEALEEELSEIEDPKGEDEEIPEEELSLEDVQAELQRVEEEIRALEPVN-MLA------IQEY 981
|
890 900 910
....*....|....*....|....*....|.
gi 767930923 1885 KSVMKERDNLRRVEETLKLERDQLKESLQET 1915
Cdd:TIGR02169 982 EEVLKRLDELKEKRAKLEEERKAILERIEEY 1012
|
|
| Microtub_bd |
pfam16796 |
Microtubule binding; This motor homology domain binds microtubules and lacks an ATP-binding ... |
19-143 |
1.12e-19 |
|
Microtubule binding; This motor homology domain binds microtubules and lacks an ATP-binding site.
Pssm-ID: 465274 [Multi-domain] Cd Length: 144 Bit Score: 87.66 E-value: 1.12e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 19 REESLGETAQVYWKTDNNVIYQVDGSKSFNFDRVFHGNETTKNVYEEIAApIIDSAIQGYNGTIFAYGQTASGKTYTMmg 98
Cdd:pfam16796 29 RPELLSEAQIDYPDETSSDGKIGSKNKSFSFDRVFPPESEQEDVFQEISQ-LVQSCLDGYNVCIFAYGQTGSGSNDGM-- 105
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 767930923 99 sedhlgvIPRAIHDIFQKIKKF-PDREFLLRVSYMEIYNETITDLL 143
Cdd:pfam16796 106 -------IPRAREQIFRFISSLkKGWKYTIELQFVEIYNESSQDLL 144
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1163-1929 |
3.72e-19 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 95.51 E-value: 3.72e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1163 LKNELKNKELTL-----EHMETERLELAQKLNENYEEVKSITKERKVLKELQKSFETERDHLRGYIREIEATGLQTKEEL 1237
Cdd:TIGR02168 218 LKAELRELELALlvlrlEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEI 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1238 KIAHIHLKEHQETIDELRRSVSEKTAQIINTQ----DLEKSHTKLQEEIPVLHEEQELLPNvkEVSETQETMNELEllte 1313
Cdd:TIGR02168 298 SRLEQQKQILRERLANLERQLEELEAQLEELEskldELAEELAELEEKLEELKEELESLEA--ELEELEAELEELE---- 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1314 qsttkdsTTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQsKQEQSLNMK 1393
Cdd:TIGR02168 372 -------SRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAE-LKELQAELE 443
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1394 EKDNETTKIVSEMEQFKpkdSALLRIEIEMLGLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKE------ 1467
Cdd:TIGR02168 444 ELEEELEELQEELERLE---EALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNqsglsg 520
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1468 ---IVAKHLETEEELKVA---------HCCLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQF 1535
Cdd:TIGR02168 521 ilgVLSELISVDEGYEAAieaalggrlQAVVVENLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGF 600
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1536 NIKQISEVQEK----------------VNELKQFKEHRKAKDSALQSI--------------------ESKMLELTNRLQ 1579
Cdd:TIGR02168 601 LGVAKDLVKFDpklrkalsyllggvlvVDDLDNALELAKKLRPGYRIVtldgdlvrpggvitggsaktNSSILERRREIE 680
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1580 ESQEEIQIMIKEKEEMKRVQEALQIERDQLKEntkEIVAKMKESQEKEYQFLKMTAVNETQEKmcEIEHLKEQFETQKLN 1659
Cdd:TIGR02168 681 ELEEKIEELEEKIAELEKALAELRKELEELEE---ELEQLRKELEELSRQISALRKDLARLEA--EVEQLEERIAQLSKE 755
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1660 LENIETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRE-------------TITRDLEK-QEELKI 1725
Cdd:TIGR02168 756 LTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDElraeltllneeaaNLRERLESlERRIAA 835
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1726 VHMHLKEHQETIDKLRGIVSEKTNEISNMQKDLEHSNDALKA---QDLKIQEELRIAHMHLKEQQETIDKLRGIVSEKTD 1802
Cdd:TIGR02168 836 TERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEAllnERASLEEALALLRSELEELSEELRELESKRSELRR 915
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1803 KLSNMQKDLENSNAKLQE---KIQEL--KANEHQLITLKKDVNETQKKVSEMEQLKKQIKdqSLTLSKLEIENLNLAQkl 1877
Cdd:TIGR02168 916 ELEELREKLAQLELRLEGlevRIDNLqeRLSEEYSLTLEEAEALENKIEDDEEEARRRLK--RLENKIKELGPVNLAA-- 991
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|..
gi 767930923 1878 henLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETkarDLEIQQELKTA 1929
Cdd:TIGR02168 992 ---IEEYEELKERYDFLTAQKEDLTEAKETLEEAIEEI---DREARERFKDT 1037
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
496-1362 |
7.06e-19 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 94.35 E-value: 7.06e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 496 IESELNSLRADYdnLVLDYEQLRTEKEEMELKLKEKNDldEFEALERKTkkdQEMQLIHEISNLKNLVKHAEVynQDLEN 575
Cdd:TIGR02168 218 LKAELRELELAL--LVLRLEELREELEELQEELKEAEE--ELEELTAEL---QELEEKLEELRLEVSELEEEI--EELQK 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 576 ELSSKVELLREKEDQIKKLQEyidsqKLENIKMDLSYSLESIEDPKQMKQTLfDAETVALDAKRESafLRSENLELKEKM 655
Cdd:TIGR02168 289 ELYALANEISRLEQQKQILRE-----RLANLERQLEELEAQLEELESKLDEL-AEELAELEEKLEE--LKEELESLEAEL 360
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 656 KELATTYKQMENDIQLYQSQLEAKKKMQVDLEKELQSAFNEITkltslidgkvpkdllcnlELEGKITDLQKELNKEVEE 735
Cdd:TIGR02168 361 EELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIE------------------RLEARLERLEDRRERLQQE 422
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 736 NEALREEvILLSELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLleeigktKDDLATTQSNYKST 815
Cdd:TIGR02168 423 IEELLKK-LEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAA-------ERELAQLQARLDSL 494
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 816 DQEFQNFktlhMDFEQKYKMVLEENERMNQeIVNLSKEAQKFDSSLG-ALKTELSYKTQELQEKTREVQERlnEMEQLKE 894
Cdd:TIGR02168 495 ERLQENL----EGFSEGVKALLKNQSGLSG-ILGVLSELISVDEGYEaAIEAALGGRLQAVVVENLNAAKK--AIAFLKQ 567
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 895 QLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIHDTvnmnidtqEQLRNALESLK 974
Cdd:TIGR02168 568 NELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLVV--------DDLDNALELAK 639
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 975 Q--HQETINTLKSKI--------SEEVSRNLHMEENTGETKDEFQQKMVGIDKKQDLEAKNTQTLTADVKDNEIIEQ-QR 1043
Cdd:TIGR02168 640 KlrPGYRIVTLDGDLvrpggvitGGSAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQlRK 719
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1044 KIFSLIQEKNELQQMLESVIAEKEQLKTDLKENIEMTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLA 1123
Cdd:TIGR02168 720 ELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELK 799
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1124 EVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKI----NEIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSIT 1199
Cdd:TIGR02168 800 ALREALDELRAELTLLNEEAANLRERLESLERRIaateRRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALL 879
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1200 KERKVLKELQKSFETERDHLRGYIREIEATGLQTKEELKIAHIHLKEHQETIDELRrsvsektAQIINTQDlekshtKLQ 1279
Cdd:TIGR02168 880 NERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLE-------VRIDNLQE------RLS 946
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1280 EEIPVLHEEQELLPNVKEvSETQETMNELELLTEQsttkdsttLARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKE 1359
Cdd:TIGR02168 947 EEYSLTLEEAEALENKIE-DDEEEARRRLKRLENK--------IKELGPVNLAAIEEYEELKERYDFLTAQKEDLTEAKE 1017
|
...
gi 767930923 1360 ALE 1362
Cdd:TIGR02168 1018 TLE 1020
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
715-1586 |
1.47e-18 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 93.58 E-value: 1.47e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 715 NLELEGKITDLQKELNKEVEENEALreevILLSELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGL 794
Cdd:TIGR02168 204 SLERQAEKAERYKELKAELRELELA----LLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSEL 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 795 LEEIGKTkddlattqsnykstDQEFQNFKTLHMDFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELS---YK 871
Cdd:TIGR02168 280 EEEIEEL--------------QKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAeleEK 345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 872 TQELQEKTREVQERLNEMEQLKEQLENRDSTLQT-VEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKS 950
Cdd:TIGR02168 346 LEELKEELESLEAELEELEAELEELESRLEELEEqLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEE 425
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 951 DIHDTVNMNIDTQ----EQLRNALESLKQHQETINTLKSKISEEVSRNlhmEENTGETKDEFQQKMVGIDKKQDLEAkNT 1026
Cdd:TIGR02168 426 LLKKLEEAELKELqaelEELEEELEELQEELERLEEALEELREELEEA---EQALDAAERELAQLQARLDSLERLQE-NL 501
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1027 QTLTADVKdnEIIEQQRKI-------FSLIQEKNELQQMLESVIAEKEQ-LKTDLKENIEMTIENQEELRL-----LGDE 1093
Cdd:TIGR02168 502 EGFSEGVK--ALLKNQSGLsgilgvlSELISVDEGYEAAIEAALGGRLQaVVVENLNAAKKAIAFLKQNELgrvtfLPLD 579
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1094 LKKQQEIVAQEKNHAIKKEGELSrTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMsEMQKKINEIEN---LKNEL--- 1167
Cdd:TIGR02168 580 SIKGTEIQGNDREILKNIEGFLG-VAKDLVKFDPKLRKALSYLLGGVLVVDDLDNAL-ELAKKLRPGYRivtLDGDLvrp 657
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1168 --------KNKELTLEHMETERLELAQKLNENYEEVKSITKERKVLKELQKSFETERDHLRGYIREIEATGLQTKEELKI 1239
Cdd:TIGR02168 658 ggvitggsAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLAR 737
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1240 AHIHLKEHQETIDELRRSVSEKTAQI-INTQDLEKSHTKLQEEIPVLHEEQELLpnvkevsetQETMNELELLTEQsttk 1318
Cdd:TIGR02168 738 LEAEVEQLEERIAQLSKELTELEAEIeELEERLEEAEEELAEAEAEIEELEAQI---------EQLKEELKALREA---- 804
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1319 dsttLARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEvkhdQLKEHIRETLAKIQESQSKQEQSLNMKEKD-N 1397
Cdd:TIGR02168 805 ----LDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLE----EQIEELSEDIESLAAEIEELEELIEELESElE 876
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1398 ETTKIVSEMEQfkpkdsallrieiEMLGLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEE 1477
Cdd:TIGR02168 877 ALLNERASLEE-------------ALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQE 943
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1478 ELKVahcclkEQEETINELRVNLSEKETEISTIQKQLeainDKLQNKIQEI----YEKEEQFnikqiSEVQEKVNEL-KQ 1552
Cdd:TIGR02168 944 RLSE------EYSLTLEEAEALENKIEDDEEEARRRL----KRLENKIKELgpvnLAAIEEY-----EELKERYDFLtAQ 1008
|
890 900 910
....*....|....*....|....*....|....
gi 767930923 1553 FKEHRKAKDSALQSIESKMLELTNRLQESQEEIQ 1586
Cdd:TIGR02168 1009 KEDLTEAKETLEEAIEEIDREARERFKDTFDQVN 1042
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
542-1374 |
2.44e-18 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 92.81 E-value: 2.44e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 542 RKTKKDQEMQLIHEISNLKNLvkhaevynQDLENELSSKVELLREKEDQIKKLQEYidSQKLENIKMDLSY--------S 613
Cdd:TIGR02168 171 KERRKETERKLERTRENLDRL--------EDILNELERQLKSLERQAEKAERYKEL--KAELRELELALLVlrleelreE 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 614 LESIEDPKQMKQTLFDAETVALDAKRES-AFLRSENLELKEKMKELATTYKQMENDIQLYQSQLEAKKKMQVDLEKELQS 692
Cdd:TIGR02168 241 LEELQEELKEAEEELEELTAELQELEEKlEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEE 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 693 AFNEITKLTSLIDgkvpkDLLCNL-ELEGKITDLQKELNKEVEENEALREEV-ILLSELKSLPSEVERLRKEIQDKSEEL 770
Cdd:TIGR02168 321 LEAQLEELESKLD-----ELAEELaELEEKLEELKEELESLEAELEELEAELeELESRLEELEEQLETLRSKVAQLELQI 395
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 771 HIITSEKDKLFSEVVHKESRVQGLLEEIG-----KTKDDLATTQSNYKSTDQEFQNFKTLHMDFEQKYKMVLEENERMNQ 845
Cdd:TIGR02168 396 ASLNNEIERLEARLERLEDRRERLQQEIEellkkLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQ 475
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 846 EIVNLSKEAQKFDSSLGALKTELsyktQELQEKTREVQERLNEMEQLKeQLENRDSTLQTVERE-------------KTL 912
Cdd:TIGR02168 476 ALDAAERELAQLQARLDSLERLQ----ENLEGFSEGVKALLKNQSGLS-GILGVLSELISVDEGyeaaieaalggrlQAV 550
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 913 ITEKLQQTLEEVKTLTQEK---------DDLK-QLQESLQIERDQLKSDIHDTVNMNIDTQEQLRNALESLKQHQETINT 982
Cdd:TIGR02168 551 VVENLNAAKKAIAFLKQNElgrvtflplDSIKgTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLVVDD 630
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 983 LKSKIseEVSRNLHMEENTGETKDEFQQK---MVGIDKKQDLEAKNTQTLTADVKdNEIIEQQRKIFSLIQEKNELQQML 1059
Cdd:TIGR02168 631 LDNAL--ELAKKLRPGYRIVTLDGDLVRPggvITGGSAKTNSSILERRREIEELE-EKIEELEEKIAELEKALAELRKEL 707
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1060 ESVIAEKEQLKTDLKENIEMTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEK 1139
Cdd:TIGR02168 708 EELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEEL 787
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1140 QQQLLNVQEEMSEMQKKI----NEIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKERKVLKELQKSFETE 1215
Cdd:TIGR02168 788 EAQIEQLKEELKALREALdelrAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEEL 867
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1216 RDHLRGYIREIEATGLQTKEELKIAHIHLKEHQETIDELRRSVSEKTAQIINTQD-LEKSHTKLQEEIPVLHEEQELLPN 1294
Cdd:TIGR02168 868 IEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREkLAQLELRLEGLEVRIDNLQERLSE 947
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1295 vkEVSETQETMNELELLTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRE 1374
Cdd:TIGR02168 948 --EYSLTLEEAEALENKIEDDEEEARRRLKRLENKIKELGPVNLAAIEEYEELKERYDFLTAQKEDLTEAKETLEEAIEE 1025
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
880-1707 |
8.20e-18 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 90.90 E-value: 8.20e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 880 REVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIHDTVNMN 959
Cdd:TIGR02169 156 RKIIDEIAGVAEFDRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRREREKAERYQALLKEKREYEGYELLKEKEAL 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 960 IDTQEQLRNALESLKQHQETINTLKSKISEEVSR--------NLHMEENTGETKDEFQQKMVGIDKKQDLEAKNTQTLTA 1031
Cdd:TIGR02169 236 ERQKEAIERQLASLEEELEKLTEEISELEKRLEEieqlleelNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKER 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1032 DVKDNEiiEQQRKIFSLI----QEKNELQQMLESVIAEKEQLKTDLKE--NIEMTIENQ-----EELRLLGDELKKQQEI 1100
Cdd:TIGR02169 316 ELEDAE--ERLAKLEAEIdkllAEIEELEREIEEERKRRDKLTEEYAElkEELEDLRAEleevdKEFAETRDELKDYREK 393
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1101 VAQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIE-----------NLKNELKN 1169
Cdd:TIGR02169 394 LEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEwkleqlaadlsKYEQELYD 473
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1170 KELTLEHMETERLELAQKLNENYEEVKSITKERKVLKELQKSFETERDHLRGYIREI------EATGLQTKEELKIAHIH 1243
Cdd:TIGR02169 474 LKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQLgsvgerYATAIEVAAGNRLNNVV 553
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1244 LKEH---QETIDEL-RRSVSEKTAQIIN-----TQDLEKSHTK--LQEEIPVLHEEQELLPNVKEVSETQETMNELELLT 1312
Cdd:TIGR02169 554 VEDDavaKEAIELLkRRKAGRATFLPLNkmrdeRRDLSILSEDgvIGFAVDLVEFDPKYEPAFKYVFGDTLVVEDIEAAR 633
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1313 EQ------------------STTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRE 1374
Cdd:TIGR02169 634 RLmgkyrmvtlegelfeksgAMTGGSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSD 713
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1375 TLAKIQESQSKQEQSLNMKEKDNEttkivsEMEQFKPKDSAllrieiemlgLSKRLQESHDEMKSVAKEKDDLQRlqevl 1454
Cdd:TIGR02169 714 ASRKIGEIEKEIEQLEQEEEKLKE------RLEELEEDLSS----------LEQEIENVKSELKELEARIEELEE----- 772
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1455 qsESDQLKENIKEIVAKHLETEEELKVAHccLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEq 1534
Cdd:TIGR02169 773 --DLHKLEEALNDLEARLSHSRIPEIQAE--LSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKE- 847
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1535 fnikQISEVQEKVNELKQFKEhrkAKDSALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTK 1614
Cdd:TIGR02169 848 ----QIKSIEKEIENLNGKKE---ELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLS 920
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1615 EIVAKM--KESQEKEYQFLKMTAVNETQEKMCEiehlkeqfETQKLNLENIETENIRLTQILHENLEEMRSVTKERDDLR 1692
Cdd:TIGR02169 921 ELKAKLeaLEEELSEIEDPKGEDEEIPEEELSL--------EDVQAELQRVEEEIRALEPVNMLAIQEYEEVLKRLDELK 992
|
890
....*....|....*
gi 767930923 1693 SVEETLKVERDQLKE 1707
Cdd:TIGR02169 993 EKRAKLEEERKAILE 1007
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
871-1622 |
1.18e-17 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 90.50 E-value: 1.18e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 871 KTQELQEKTREVQERL--NEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQL 948
Cdd:TIGR02168 214 RYKELKAELRELELALlvLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYAL 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 949 KSDIHDTVNMNIDTQEQLRNALESLKQHQETINTLKSKiSEEVSRNLHMEEntgETKDEFQQKMVGIDKKQDLEAKNTQT 1028
Cdd:TIGR02168 294 ANEISRLEQQKQILRERLANLERQLEELEAQLEELESK-LDELAEELAELE---EKLEELKEELESLEAELEELEAELEE 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1029 L--TADVKDNEIIEQQRKIFSLIQEKNELQQMLESVIAEKEQLKtdlkENIEMTIENQEEL--RLLGDELKKQQEIVAQE 1104
Cdd:TIGR02168 370 LesRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLE----DRRERLQQEIEELlkKLEEAELKELQAELEEL 445
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1105 KNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENL----KNELKNKE-------LT 1173
Cdd:TIGR02168 446 EEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFsegvKALLKNQSglsgilgVL 525
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1174 LEHMETER-----LELAQKLNENYEEVKSITKERKVLkELQKSFETERDHL----RGYIREIEATGLQTKEELKIAHIHL 1244
Cdd:TIGR02168 526 SELISVDEgyeaaIEAALGGRLQAVVVENLNAAKKAI-AFLKQNELGRVTFlpldSIKGTEIQGNDREILKNIEGFLGVA 604
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1245 KEHQETIDELRRSVSEKTAQIINTQDLEKSHTKLQEEIP----------------------------VLHEEQELLPNVK 1296
Cdd:TIGR02168 605 KDLVKFDPKLRKALSYLLGGVLVVDDLDNALELAKKLRPgyrivtldgdlvrpggvitggsaktnssILERRREIEELEE 684
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1297 EVSETQETMNELE-----LLTEQSTTKDSTTLARIEMERL------------RLNEKFQESQEEIKSLTKERDNLKTIKE 1359
Cdd:TIGR02168 685 KIEELEEKIAELEkalaeLRKELEELEEELEQLRKELEELsrqisalrkdlaRLEAEVEQLEERIAQLSKELTELEAEIE 764
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1360 ALEVKHDQLKEHIRETLAKIQESQSKQEQSLNMKEKDNETTKIVSEMEQ-----FKPKDSALLRIEIEMLGLSKRLQESH 1434
Cdd:TIGR02168 765 ELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTllneeAANLRERLESLERRIAATERRLEDLE 844
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1435 DEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNLSEKETEISTIQKQL 1514
Cdd:TIGR02168 845 EQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKL 924
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1515 EAINDKLQNKIQEIYEKEEQFNIKQISEVQEkvnelkqFKEHRKAKDSALQSIESKMLELTNRLQE-------SQEEIQI 1587
Cdd:TIGR02168 925 AQLELRLEGLEVRIDNLQERLSEEYSLTLEE-------AEALENKIEDDEEEARRRLKRLENKIKElgpvnlaAIEEYEE 997
|
810 820 830
....*....|....*....|....*....|....*
gi 767930923 1588 MIKEKEEMKRVQEALQIERDQLKENTKEIVAKMKE 1622
Cdd:TIGR02168 998 LKERYDFLTAQKEDLTEAKETLEEAIEEIDREARE 1032
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
1052-1928 |
5.94e-17 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 88.25 E-value: 5.94e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1052 KNELQQMLESVIAEKEQLKTDLKENIEMTIENQEELRllgdelkkQQEIVAQEKNHAIKKEGE-LSRTCDRLAEVEEKLK 1130
Cdd:pfam15921 73 KEHIERVLEEYSHQVKDLQRRLNESNELHEKQKFYLR--------QSVIDLQTKLQEMQMERDaMADIRRRESQSQEDLR 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1131 EKSQQLQEKQQQLLNVQEEMseMQKKINEIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSI---------TKE 1201
Cdd:pfam15921 145 NQLQNTVHELEAAKCLKEDM--LEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFEEASGKKIYEHDSMstmhfrslgSAI 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1202 RKVLKELqksfETERDHLRGYIREIE--ATGLQTKEELKIaHIHLKEHQETIDELrrsVSEKTAQIINTQDLEKSH---- 1275
Cdd:pfam15921 223 SKILREL----DTEISYLKGRIFPVEdqLEALKSESQNKI-ELLLQQHQDRIEQL---ISEHEVEITGLTEKASSArsqa 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1276 TKLQEEIPVLHEE--QELLPNVKEVSETQETMNELELLTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKERDN 1353
Cdd:pfam15921 295 NSIQSQLEIIQEQarNQNSMYMRQLSDLESTVSQLRSELREAKRMYEDKIEELEKQLVLANSELTEARTERDQFSQESGN 374
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1354 LKtikealevkhDQLKEHIRETLAKIQESQSKQEQSLNMKEKDNETTKIVSEME-QFKPKDSALLRIEIEMLGLSKRLQ- 1431
Cdd:pfam15921 375 LD----------DQLQKLLADLHKREKELSLEKEQNKRLWDRDTGNSITIDHLRrELDDRNMEVQRLEALLKAMKSECQg 444
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1432 ESHDEMKSVAKEKDDLQRLQEvLQSESDQLKENIKEIVakhleteEELKVAHCCLKEQEETINELRVNLSEKETEISTIQ 1511
Cdd:pfam15921 445 QMERQMAAIQGKNESLEKVSS-LTAQLESTKEMLRKVV-------EELTAKKMTLESSERTVSDLTASLQEKERAIEATN 516
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1512 KQLEAINDKLQNKIQEIyekeeqfnikqisevqekvNELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQIMIKE 1591
Cdd:pfam15921 517 AEITKLRSRVDLKLQEL-------------------QHLKNEGDHLRNVQTECEALKLQMAEKDKVIEILRQQIENMTQL 577
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1592 KEEMKRVQEALQIERDQLKentKEIVAKMKESQekEYQFLKmtavNETQEKMCEIEHLKEQFETQKLNLENIETENIR-L 1670
Cdd:pfam15921 578 VGQHGRTAGAMQVEKAQLE---KEINDRRLELQ--EFKILK----DKKDAKIRELEARVSDLELEKVKLVNAGSERLRaV 648
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1671 TQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETITRDLEKQEELKIVHMHLKEHQETIDKLRGIVSEKTNE 1750
Cdd:pfam15921 649 KDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELEQTRNTLKSMEGSDGHAMKV 728
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1751 ISNMQKDLEHSNDALKAQDLKIQ---EELRIAHMH---LKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQE 1824
Cdd:pfam15921 729 AMGMQKQITAKRGQIDALQSKIQfleEAMTNANKEkhfLKEEKNKLSQELSTVATEKNKMAGELEVLRSQERRLKEKVAN 808
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1825 LkanEHQLITLKKDVNETQKKVSEMEQLKKQIKDQ-SLTLSKLEIENLNLAQKLHENLEEMKSVMKERDNLRRVEETLKL 1903
Cdd:pfam15921 809 M---EVALDKASLQFAECQDIIQRQEQESVRLKLQhTLDVKELQGPGYTSNSSMKPRLLQPASFTRTHSNVPSSQSTASF 885
|
890 900
....*....|....*....|....*...
gi 767930923 1904 --ERDQLKESLQETKARDL-EIQQELKT 1928
Cdd:pfam15921 886 lsHHSRKTNALKEDPTRDLkQLLQELRS 913
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1152-2032 |
6.00e-17 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 88.19 E-value: 6.00e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1152 EMQKKINEIENLKNELKNKeltLEHMETERlELAQKLNENYEEVKSItkERKVLKELQKSFETERDHLRGYIREIEatgl 1231
Cdd:TIGR02168 183 RTRENLDRLEDILNELERQ---LKSLERQA-EKAERYKELKAELREL--ELALLVLRLEELREELEELQEELKEAE---- 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1232 qtkEELKIAHIHLKEHQETIDELRRSVSEKTAQIINTQDLEKSHTKLQEEIPvlHEEQELLPNVKEVSETQETMNELELL 1311
Cdd:TIGR02168 253 ---EELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLE--QQKQILRERLANLERQLEELEAQLEE 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1312 TEQSTTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEqsln 1391
Cdd:TIGR02168 328 LESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIE---- 403
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1392 mkekdnettkivsemeqfkpkdsallRIEIEMLGLSKRLQESHDEMKSVAKEKDDLQRlqEVLQSESDQLKENIKEIVAK 1471
Cdd:TIGR02168 404 --------------------------RLEARLERLEDRRERLQQEIEELLKKLEEAEL--KELQAELEELEEELEELQEE 455
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1472 HLETEEElkvahccLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQF-NIKQISEVQEKVNEL 1550
Cdd:TIGR02168 456 LERLEEA-------LEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLkNQSGLSGILGVLSEL 528
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1551 KQF-KEHRKAKDSALQSIeskMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKMKESQekeyq 1629
Cdd:TIGR02168 529 ISVdEGYEAAIEAALGGR---LQAVVVENLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGF----- 600
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1630 flkMTAVNETQEKMCEIEHLKEQFETQKLNLENIETENirltQILHENLEEMRSVTKERDDLRSV---------EETLKV 1700
Cdd:TIGR02168 601 ---LGVAKDLVKFDPKLRKALSYLLGGVLVVDDLDNAL----ELAKKLRPGYRIVTLDGDLVRPGgvitggsakTNSSIL 673
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1701 ERDQLKENLRETITRDLEKQEELKIVHMHLKEHQETIDKLRGIVSEKTNEISNMQKDLEHSNDALKAQDLKIQEELRIAH 1780
Cdd:TIGR02168 674 ERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLS 753
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1781 MHLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQLKKQIKDQs 1860
Cdd:TIGR02168 754 KELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERR- 832
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1861 ltLSKLEIENLNLAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKTARMLSKEHKETV 1940
Cdd:TIGR02168 833 --IAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKR 910
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1941 DKLREKISEKTIQISDIQKDLDKSK---DELQKKDRQNHQV--------KPEKRLLSDGQQHLTESLREKCSRI------ 2003
Cdd:TIGR02168 911 SELRRELEELREKLAQLELRLEGLEvriDNLQERLSEEYSLtleeaealENKIEDDEEEARRRLKRLENKIKELgpvnla 990
|
890 900 910
....*....|....*....|....*....|....
gi 767930923 2004 -----KELLKRYSEMDDHYECLNRLSLDLEKEIE 2032
Cdd:TIGR02168 991 aieeyEELKERYDFLTAQKEDLTEAKETLEEAIE 1024
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1190-1970 |
7.25e-17 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 87.82 E-value: 7.25e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1190 ENYEEVKSITKErkVLKELQKsFETERDHLRGYireieaTGLQTKEELKIAHIHLKEhqetIDELRRSVSEKTAQIintQ 1269
Cdd:TIGR02169 184 ENIERLDLIIDE--KRQQLER-LRREREKAERY------QALLKEKREYEGYELLKE----KEALERQKEAIERQL---A 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1270 DLEKSHTKLQEEIPVLHEE-QELLPNVKEVSETQETMNELELLTEQsttkdsTTLARIEMERLRLNEKFQESQEEIKSLT 1348
Cdd:TIGR02169 248 SLEEELEKLTEEISELEKRlEEIEQLLEELNKKIKDLGEEEQLRVK------EKIGELEAEIASLERSIAEKERELEDAE 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1349 KERDNLKTIKEALEVKHDQLKEHIRETlaKIQESQSKQEqslnMKEKDNETTKIVSEMEQfkpKDSALLRIEIEMLGLSK 1428
Cdd:TIGR02169 322 ERLAKLEAEIDKLLAEIEELEREIEEE--RKRRDKLTEE----YAELKEELEDLRAELEE---VDKEFAETRDELKDYRE 392
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1429 RLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNLSEKETEIS 1508
Cdd:TIGR02169 393 KLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELY 472
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1509 TIQKQLEAINDKLQNKIQEIYEKEEQFNIKQ----------------ISEVQEKVNELKQFKE-HRKAKDSALqsieskm 1571
Cdd:TIGR02169 473 DLKEEYDRVEKELSKLQRELAEAEAQARASEervrggraveevlkasIQGVHGTVAQLGSVGErYATAIEVAA------- 545
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1572 lelTNRLQ--------ESQEEIQIMIKEK---------EEMKRVQEALQ--------------IERDQLKENT------- 1613
Cdd:TIGR02169 546 ---GNRLNnvvveddaVAKEAIELLKRRKagratflplNKMRDERRDLSilsedgvigfavdlVEFDPKYEPAfkyvfgd 622
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1614 KEIVAKMKESQEKEYQFLKMTAVNETQEK---------------------MCEIEHLKEQFETQKLNLENIETENIRLTQ 1672
Cdd:TIGR02169 623 TLVVEDIEAARRLMGKYRMVTLEGELFEKsgamtggsraprggilfsrsePAELQRLRERLEGLKRELSSLQSELRRIEN 702
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1673 ILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLREtitrdleKQEELKIVHMHLKEHQETIDKLRGIVSEKTNEIS 1752
Cdd:TIGR02169 703 RLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEE-------LEEDLSSLEQEIENVKSELKELEARIEELEEDLH 775
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1753 NMQKDLEhsndALKAQDLkiQEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQL 1832
Cdd:TIGR02169 776 KLEEALN----DLEARLS--HSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQI 849
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1833 ITLKKDVNETQKKVSEMEQLKKQIKDQSLTLSKlEIENLnlaQKLHENLEEMKSVMKERdnlrrvEETLKLERDQLKESL 1912
Cdd:TIGR02169 850 KSIEKEIENLNGKKEELEEELEELEAALRDLES-RLGDL---KKERDELEAQLRELERK------IEELEAQIEKKRKRL 919
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*...
gi 767930923 1913 QETKARDLEIQQELKTARMLSKEHKEtvdklrekISEKTIQISDIQKDLDKSKDELQK 1970
Cdd:TIGR02169 920 SELKAKLEALEEELSEIEDPKGEDEE--------IPEEELSLEDVQAELQRVEEEIRA 969
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
646-1468 |
1.06e-16 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 87.43 E-value: 1.06e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 646 SENLELKEKMKELATTYKQMENDIQLYQ-----SQLEAKKKMQVDLEKELQSAFNEITKLTSLIDGKvpkdllcNLELEg 720
Cdd:TIGR02169 197 RQQLERLRREREKAERYQALLKEKREYEgyellKEKEALERQKEAIERQLASLEEELEKLTEEISEL-------EKRLE- 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 721 KITDLQKELNKEVEEnEALREEVILLSELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGK 800
Cdd:TIGR02169 269 EIEQLLEELNKKIKD-LGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEE 347
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 801 TKDDLATTQSNYKSTDQEFqnfktlhMDFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTR 880
Cdd:TIGR02169 348 ERKRRDKLTEEYAELKEEL-------EDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSE 420
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 881 EVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIHD---TVN 957
Cdd:TIGR02169 421 ELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEaeaQAR 500
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 958 MNIDTQEQLRNALESLKQHQETI-NTLKSKISEEVSRNLHMEENTGetkdefqQKMVGIDKKQDLEAKNTQTLTADVKDN 1036
Cdd:TIGR02169 501 ASEERVRGGRAVEEVLKASIQGVhGTVAQLGSVGERYATAIEVAAG-------NRLNNVVVEDDAVAKEAIELLKRRKAG 573
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1037 EI-------IEQQRKIFSLIQEKNELQQMLESVIAEKEQLK--------TDLKENIEMTIENQEELRLL---GDELKKQQ 1098
Cdd:TIGR02169 574 RAtflplnkMRDERRDLSILSEDGVIGFAVDLVEFDPKYEPafkyvfgdTLVVEDIEAARRLMGKYRMVtleGELFEKSG 653
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1099 EIV------AQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENlknelknkel 1172
Cdd:TIGR02169 654 AMTggsrapRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEK---------- 723
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1173 tlehmetERLELAQKLNENYEEVKSITKERKVLKELQKSFETERDHLRGYIREIEATGLQTKEEL-----KIAHIHLKEH 1247
Cdd:TIGR02169 724 -------EIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALndleaRLSHSRIPEI 796
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1248 QETIDELRRSVSEKTAQIintQDLEKSHTKLQEEIPVLHEEQELLPNVKEVSETQETMN--ELELLTEQSTTKDStTLAR 1325
Cdd:TIGR02169 797 QAELSKLEEEVSRIEARL---REIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIekEIENLNGKKEELEE-ELEE 872
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1326 IEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQSLNMKEKDNETTKIVSE 1405
Cdd:TIGR02169 873 LEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELS 952
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 767930923 1406 MEQFKPKdsaLLRIEIEMLGLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEI 1468
Cdd:TIGR02169 953 LEDVQAE---LQRVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAILERIEEY 1012
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1425-2245 |
2.28e-15 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 83.18 E-value: 2.28e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1425 GLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLK---------ENIKEIVAKHLETEEELKVAHccLKEQEETINE 1495
Cdd:TIGR02168 166 GISKYKERRKETERKLERTRENLDRLEDILNELERQLKslerqaekaERYKELKAELRELELALLVLR--LEELREELEE 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1496 LRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQFNIKQiSEVQEKVNELKQFKEHRKAKDSALQSIESKMLELT 1575
Cdd:TIGR02168 244 LQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQ-KELYALANEISRLEQQKQILRERLANLERQLEELE 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1576 NRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKMK--ESQEKEYQFLKMTAVNETQEKMCEIEHLKEQF 1653
Cdd:TIGR02168 323 AQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEelESRLEELEEQLETLRSKVAQLELQIASLNNEI 402
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1654 ETQKLNLENIETENIRLTQILHENLEEMrsvtkERDDLRSVEETLkverDQLKENLRETITRDLEKQEELKIVHMHLKEH 1733
Cdd:TIGR02168 403 ERLEARLERLEDRRERLQQEIEELLKKL-----EEAELKELQAEL----EELEEELEELQEELERLEEALEELREELEEA 473
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1734 QETIDKLRGIVSEKTNEISNMQKDLEH--SNDALKAQDLKIQEELRIAHMHLKEQQETIDKLRGIVSekTDKLSNMQKDL 1811
Cdd:TIGR02168 474 EQALDAAERELAQLQARLDSLERLQENleGFSEGVKALLKNQSGLSGILGVLSELISVDEGYEAAIE--AALGGRLQAVV 551
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1812 ENSNAKLQEKIQELKANEHQLITL--KKDVNETQKKVSEMEQLKKQikDQSLTLSKLEIENLNLAQKLHENL-------E 1882
Cdd:TIGR02168 552 VENLNAAKKAIAFLKQNELGRVTFlpLDSIKGTEIQGNDREILKNI--EGFLGVAKDLVKFDPKLRKALSYLlggvlvvD 629
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1883 EMKSVMKERDNLRRVEETLKLERDQLKESLQETKARD------LEIQQELKTARMLSKEHKETVDKLREKISEKTIQISD 1956
Cdd:TIGR02168 630 DLDNALELAKKLRPGYRIVTLDGDLVRPGGVITGGSAktnssiLERRREIEELEEKIEELEEKIAELEKALAELRKELEE 709
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1957 IQKDLDKSKDELQKKDRQNHQVKPEKRLLSDGQQHLTESLREKCSRIKELLKRYSEMDDHYECLNRLSLDLEKEIEFQKE 2036
Cdd:TIGR02168 710 LEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEA 789
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2037 LSMRVKANLSLpylQTKHIEKLFTANQRCSMEFHRIMKKLKYVlsyvtkikEEQHESINKFEMDFIDEVEKQKELLIKIQ 2116
Cdd:TIGR02168 790 QIEQLKEELKA---LREALDELRAELTLLNEEAANLRERLESL--------ERRIAATERRLEDLEEQIEELSEDIESLA 858
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2117 HLQQDCDVPSRELRD-LKLNQNMDLHIEEILKDfSESEFPSIKTEFQQVLSNRKEMTQFLEEwLNTRfdIEKLKNGIQKE 2195
Cdd:TIGR02168 859 AEIEELEELIEELESeLEALLNERASLEEALAL-LRSELEELSEELRELESKRSELRRELEE-LREK--LAQLELRLEGL 934
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|
gi 767930923 2196 NDRICQVNNFFNNRIIAIMNESTEFEERSATISKEWEQDLKSLKEKNEKL 2245
Cdd:TIGR02168 935 EVRIDNLQERLSEEYSLTLEEAEALENKIEDDEEEARRRLKRLENKIKEL 984
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1006-1552 |
2.71e-15 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 82.68 E-value: 2.71e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1006 DEFQQKMVGIDKKQDLEAKNTQTLTADV--KDNEIIEQQRKIFSLIQEKNELQQMLESVIAEKEQLKTDLKENIEMTIEN 1083
Cdd:COG1196 235 RELEAELEELEAELEELEAELEELEAELaeLEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRREL 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1084 QEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENL 1163
Cdd:COG1196 315 EERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRA 394
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1164 KNELKNKELTLEHMETERLELAQKLNENYEEVKSITKERKVLKELQKSFETERDHLRgyiREIEATGLQTKEELKIAHIH 1243
Cdd:COG1196 395 AAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEE---AELEEEEEALLELLAELLEE 471
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1244 LKEHQETIDELRRSVSEKTAQIINTQDLEKSHTKLQEEIPVLHEEQELLPNVKEVSETQETMNELELLTEqsttkdsTTL 1323
Cdd:COG1196 472 AALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALE-------AAL 544
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1324 ARIEMERLRLNEkfQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQSlnmKEKDNETTKIV 1403
Cdd:COG1196 545 AAALQNIVVEDD--EVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDL---READARYYVLG 619
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1404 SEMEQFKPKDSALLRIEIEMLGLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAH 1483
Cdd:COG1196 620 DTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEAL 699
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 767930923 1484 CCLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQFNIKQ------ISEVQEKVNELKQ 1552
Cdd:COG1196 700 LAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEElpeppdLEELERELERLER 774
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
717-1280 |
4.71e-15 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 81.65 E-value: 4.71e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 717 ELEGKITDLQKELNKEVEENEALREeviLLSELKSLPSEVERLRKEIQDKSEELHIITSEK---DKLFSEVVHKESRVQG 793
Cdd:PRK03918 173 EIKRRIERLEKFIKRTENIEELIKE---KEKELEEVLREINEISSELPELREELEKLEKEVkelEELKEEIEELEKELES 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 794 LLEEIGKTKDDLATTQSNYKSTDQEFQNFKTLHMDFEQ------KYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTE 867
Cdd:PRK03918 250 LEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKElkekaeEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEER 329
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 868 LSyKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITE-KLQQTLEEVKTLTQEKDDLKQLQESLQIERD 946
Cdd:PRK03918 330 IK-ELEEKEERLEELKKKLKELEKRLEELEERHELYEEAKAKKEELERlKKRLTGLTPEKLEKELEELEKAKEEIEEEIS 408
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 947 QLKSDIHDTVNmnidTQEQLRNALESLKQHQETINTLKSKISEEVSRNLhMEENTGETKDEFQQKMVGIDKKQDLEAKnt 1026
Cdd:PRK03918 409 KITARIGELKK----EIKELKKAIEELKKAKGKCPVCGRELTEEHRKEL-LEEYTAELKRIEKELKEIEEKERKLRKE-- 481
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1027 qtltaDVKDNEIIEQQRKIFSliqekneLQQMLESVIAEKEQLKTDLKENIEMTIENQEELRLLGDELKKQQEIVAQEKN 1106
Cdd:PRK03918 482 -----LRELEKVLKKESELIK-------LKELAEQLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELE 549
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1107 HAIKKEGELSRTCDRLAEVEEKLKE-KSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNKELTLEHMETERLELA 1185
Cdd:PRK03918 550 KLEELKKKLAELEKKLDELEEELAElLKELEELGFESVEELEERLKELEPFYNEYLELKDAEKELEREEKELKKLEEELD 629
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1186 QKLNENYEEVKSITKERKVLKELQKSF-ETERDHLRGYIREIEATGLQTKEELKIAHIHLKEHQETIDELRRSVSEKTAQ 1264
Cdd:PRK03918 630 KAFEELAETEKRLEELRKELEELEKKYsEEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREKA 709
|
570
....*....|....*.
gi 767930923 1265 IINTQDLEKSHTKLQE 1280
Cdd:PRK03918 710 KKELEKLEKALERVEE 725
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1359-1949 |
6.56e-15 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 81.26 E-value: 6.56e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1359 EALEVKHDQLKEHIRETLAKIQESQSKQEQSLNMKEKDNETTKIVSEMEQ-FKPKDSALLRIEIEMLGLSKRLQEshdeM 1437
Cdd:PRK03918 158 DDYENAYKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLReINEISSELPELREELEKLEKEVKE----L 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1438 KSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVahccLKEQEETINELRvnlsEKETEISTIQKQLEAI 1517
Cdd:PRK03918 234 EELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEE----LEEKVKELKELK----EKAEEYIKLSEFYEEY 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1518 NDKLQN--KIQEIYEKEEQFNIKQISEVQEKVNELKQFKEHRKakdsalqsieskmleltnRLQESQEEIQIMIKEKEEM 1595
Cdd:PRK03918 306 LDELREieKRLSRLEEEINGIEERIKELEEKEERLEELKKKLK------------------ELEKRLEELEERHELYEEA 367
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1596 KRVQEALQIERDQLKENTKEIVAKMKESQEKEyqflKMTAVNETQEKMCEIEHLKEQFETQKLNLENIETENIR------ 1669
Cdd:PRK03918 368 KAKKEELERLKKRLTGLTPEKLEKELEELEKA----KEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKcpvcgr 443
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1670 -LTQilHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLREtITRDLEKQEELKIVHMHLKEHQETIDKLRGIVSEKT 1748
Cdd:PRK03918 444 eLTE--EHRKELLEEYTAELKRIEKELKEIEEKERKLRKELRE-LEKVLKKESELIKLKELAEQLKELEEKLKKYNLEEL 520
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1749 NEISNMQKDLEHSNDALKAQDLKIQEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKAN 1828
Cdd:PRK03918 521 EKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEELGFESVEELEERLKELEPF 600
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1829 EHQLITLKKDVNETQKKVSEMEQLKKQIKDQSLTLSKLEIENLNLAQKLHE-----NLEEMKSVMKERDNLRRVEETLKL 1903
Cdd:PRK03918 601 YNEYLELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEElekkySEEEYEELREEYLELSRELAGLRA 680
|
570 580 590 600
....*....|....*....|....*....|....*....|....*.
gi 767930923 1904 ERDQLKESLQETKaRDLEIQQELKTARMLSKEHKETVDKLREKISE 1949
Cdd:PRK03918 681 ELEELEKRREEIK-KTLEKLKEELEEREKAKKELEKLEKALERVEE 725
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
964-1757 |
4.40e-14 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 78.96 E-value: 4.40e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 964 EQLRNALESLKQHQETINTLKSKIsEEVSRNLHMEENTGETKDEFQQKMvgiDKKQDLEAkntqtlTADVKDNEIIEQQR 1043
Cdd:TIGR02169 170 RKKEKALEELEEVEENIERLDLII-DEKRQQLERLRREREKAERYQALL---KEKREYEG------YELLKEKEALERQK 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1044 kifsliqeknelqQMLESVIAEKEQLKTDLKENIEMTIENQEELRLLGDELKKQQEIVAQEKNHAIKK-----EGELSRT 1118
Cdd:TIGR02169 240 -------------EAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKEkigelEAEIASL 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1119 CDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEI----ENLKNELKNKELTLEHMETERLELAQKLNENYEE 1194
Cdd:TIGR02169 307 ERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEErkrrDKLTEEYAELKEELEDLRAELEEVDKEFAETRDE 386
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1195 VKSITKERKVLKELQKSFETERDHLRGYIREIEATGLQTKEELKIAHIHLKEHQETIDELRRSVSEKTAQIINTQ----D 1270
Cdd:TIGR02169 387 LKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAadlsK 466
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1271 LEKSHTKLQEEIPVLHEEQELLPnvKEVSETQETMNELEllTEQSTTKDSTTL--ARIE------MERLRLNEKFQESQE 1342
Cdd:TIGR02169 467 YEQELYDLKEEYDRVEKELSKLQ--RELAEAEAQARASE--ERVRGGRAVEEVlkASIQgvhgtvAQLGSVGERYATAIE 542
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1343 -----EIKSLTKERDNlkTIKEALEVkhdqLKEHI--RET---LAKIQESQSKQEQS---------LNMKEKDNE----- 1398
Cdd:TIGR02169 543 vaagnRLNNVVVEDDA--VAKEAIEL----LKRRKagRATflpLNKMRDERRDLSILsedgvigfaVDLVEFDPKyepaf 616
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1399 -----TTKIVSEMEQFKPK---------DSALLRIEIEMLG--------------LSKRLQESHDEMKSVAKEKDDLQRL 1450
Cdd:TIGR02169 617 kyvfgDTLVVEDIEAARRLmgkyrmvtlEGELFEKSGAMTGgsraprggilfsrsEPAELQRLRERLEGLKRELSSLQSE 696
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1451 QEVLQSESDQLKENIKEIVAKHLETEEELKVahccLKEQEETINELrvnLSEKETEISTIQKQLEAINDKLQNKIQEIYE 1530
Cdd:TIGR02169 697 LRRIENRLDELSQELSDASRKIGEIEKEIEQ----LEQEEEKLKER---LEELEEDLSSLEQEIENVKSELKELEARIEE 769
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1531 KEEQFNIKQI-----------SEVQEKVNELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQ 1599
Cdd:TIGR02169 770 LEEDLHKLEEalndlearlshSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQI 849
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1600 EALQIERDQLKENTKEIVAKMKESQEKEYQFLKMTA-----VNETQEKMCEIEHLKEQFETQ--------KLNLENIETE 1666
Cdd:TIGR02169 850 KSIEKEIENLNGKKEELEEELEELEAALRDLESRLGdlkkeRDELEAQLRELERKIEELEAQiekkrkrlSELKAKLEAL 929
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1667 NIRLTQILhENLEEMRSVTKERDDLRSVEETL-KVERDQlkENLRETITRDLEKQEELKIVHMHLKEHQETIDKLRGIVS 1745
Cdd:TIGR02169 930 EEELSEIE-DPKGEDEEIPEEELSLEDVQAELqRVEEEI--RALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAIL 1006
|
890
....*....|..
gi 767930923 1746 EKTNEISNMQKD 1757
Cdd:TIGR02169 1007 ERIEEYEKKKRE 1018
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
832-1381 |
9.54e-14 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 77.67 E-value: 9.54e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 832 KYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKT 911
Cdd:COG1196 233 KLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRR 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 912 LITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIHDTVNMNIDTQEQLRNALESLKQHQETINTLKSKISEEV 991
Cdd:COG1196 313 ELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEAL 392
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 992 SRNLHMEENTGETKDEFQQKMVGIDK-KQDLEAKNTQTLTADVKDNEIIEQQRKIFSLIQEKNELQQMLESVIAEKEQLK 1070
Cdd:COG1196 393 RAAAELAAQLEELEEAEEALLERLERlEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEA 472
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1071 TDLKENIEMTIENQEELRLLGDELKKQQEIVAQE-----KNHAIKKEGELSRTCDRLAEVEEKLkEKSQQLQEKQQQLLN 1145
Cdd:COG1196 473 ALLEAALAELLEELAEAAARLLLLLEAEADYEGFlegvkAALLLAGLRGLAGAVAVLIGVEAAY-EAALEAALAAALQNI 551
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1146 VQEEMSEMQKkinEIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKERKVLKELQKSFETERDHLRGYIRE 1225
Cdd:COG1196 552 VVEDDEVAAA---AIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLV 628
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1226 IEAtglqtkEELKIAHIHLKEHQETIDELRRSVSEKTAQIINTQDLEKSHTKLQEEIPVLHEEQELLPNVKEVSETQETM 1305
Cdd:COG1196 629 AAR------LEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAE 702
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 767930923 1306 NELELLTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQE 1381
Cdd:COG1196 703 EEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEA 778
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1074-1723 |
1.47e-13 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 77.03 E-value: 1.47e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1074 KENIEMTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEM 1153
Cdd:PRK03918 178 IERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEKELESLEGSKRKL 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1154 QKKINEIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKERKVLKELQKSFETERDHLRGYIREIEAtgLQT 1233
Cdd:PRK03918 258 EEKIRELEERIEELKKEIEELEEKVKELKELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKE--LEE 335
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1234 KEElkiahiHLKEHQETIDELRRSVSEktaqiintqdLEKSHtKLQEEIPVLHEEQELLPNVKEVSETQETMNELELLTE 1313
Cdd:PRK03918 336 KEE------RLEELKKKLKELEKRLEE----------LEERH-ELYEEAKAKKEELERLKKRLTGLTPEKLEKELEELEK 398
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1314 QSTTkdsttlarIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLakiqesqsKQEQSLNMK 1393
Cdd:PRK03918 399 AKEE--------IEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELTEEHRKEL--------LEEYTAELK 462
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1394 EKDNETTKIVSEMEQFKPKdsaLLRIEIEMLGLSK--RLQESHDEMKSVAKEkddlqrLQEVLQSESDQLKENIKEIVAK 1471
Cdd:PRK03918 463 RIEKELKEIEEKERKLRKE---LRELEKVLKKESEliKLKELAEQLKELEEK------LKKYNLEELEKKAEEYEKLKEK 533
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1472 HLETEEELKVahccLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLqnkiqeiyekeEQFNIKQISEVQEKVNELK 1551
Cdd:PRK03918 534 LIKLKGEIKS----LKKELEKLEELKKKLAELEKKLDELEEELAELLKEL-----------EELGFESVEELEERLKELE 598
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1552 QFKEhrkakdsalqsiesKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKMKESQEKEYQFL 1631
Cdd:PRK03918 599 PFYN--------------EYLELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEEEYEEL 664
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1632 KmtavNETQEKMCEIEHLKEQFETqklnLENIETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRE 1711
Cdd:PRK03918 665 R----EEYLELSRELAGLRAELEE----LEKRREEIKKTLEKLKEELEEREKAKKELEKLEKALERVEELREKVKKYKAL 736
|
650
....*....|..
gi 767930923 1712 TITRDLEKQEEL 1723
Cdd:PRK03918 737 LKERALSKVGEI 748
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
964-1550 |
3.27e-13 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 75.87 E-value: 3.27e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 964 EQLRNALESLKQHQETINTLKSKISEEVSRNLHMEENTGETKDEFQQKMVGIDKKQDLEAKNTQTLTADVKDNEIIEQQR 1043
Cdd:PRK03918 158 DDYENAYKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELK 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1044 KIFsliqekNELQQMLESVIAEKEQLKTDLKENIEMTIENQEELRLLGDELKKQQEIVAQEKNHaIKKEGELSRTCDRLA 1123
Cdd:PRK03918 238 EEI------EELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKEKAEEY-IKLSEFYEEYLDELR 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1124 EVEEKLKEKSqqlqekqQQLLNVQEEMSEMQKKINEIENLKNELKNKELTLEHMET--ERLELAQKLNENYEEVKS---- 1197
Cdd:PRK03918 311 EIEKRLSRLE-------EEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEErhELYEEAKAKKEELERLKKrltg 383
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1198 -----ITKERKVLKELQKSFETERDHLRGYIREIEatglQTKEELKIAHIHLKEHQETIDELRRSVSEK---------TA 1263
Cdd:PRK03918 384 ltpekLEKELEELEKAKEEIEEEISKITARIGELK----KEIKELKKAIEELKKAKGKCPVCGRELTEEhrkelleeyTA 459
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1264 QIIN-TQDLEKSHTKLQEEIPVLHEEQELLPNVKEVSETQETMNELELLTEQSTTKDSTTLARIEMERLRLNEKFQESQE 1342
Cdd:PRK03918 460 ELKRiEKELKEIEEKERKLRKELRELEKVLKKESELIKLKELAEQLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKG 539
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1343 EIKSLTKERDNLKTIK---EALEVKHDQLKEHIRETLAKIQESQSKQEQSLNMKekdnettkiVSEMEQFKPKDSALLRI 1419
Cdd:PRK03918 540 EIKSLKKELEKLEELKkklAELEKKLDELEEELAELLKELEELGFESVEELEER---------LKELEPFYNEYLELKDA 610
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1420 EIEMLGLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLK-----ENIKEIVAKHLETEEELKVAHCCLKEQEETIN 1494
Cdd:PRK03918 611 EKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEkkyseEEYEELREEYLELSRELAGLRAELEELEKRRE 690
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*...
gi 767930923 1495 ELRVNLSEKETEISTIQKQLEAIND--KLQNKIQEIYEKEEQFNIKQISEVQEKVNEL 1550
Cdd:PRK03918 691 EIKKTLEKLKEELEEREKAKKELEKleKALERVEELREKVKKYKALLKERALSKVGEI 748
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
512-1265 |
9.99e-13 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 74.33 E-value: 9.99e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 512 LDYEQLRTEKEEMELKLKekndLDEFEALERktkkdQEMQLIHEISNLKNLVKHAEVYNQDLENELSSKVELLREKEDQI 591
Cdd:TIGR02169 211 ERYQALLKEKREYEGYEL----LKEKEALER-----QKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKI 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 592 KKL--QEYIDSQ-KLENIKMDLSySLESIEDPKQMKQTLFDAETVALDAKRESAFLRSENLE------------LKEKMK 656
Cdd:TIGR02169 282 KDLgeEEQLRVKeKIGELEAEIA-SLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEreieeerkrrdkLTEEYA 360
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 657 ELATTYKQMENDIQLYQSQLEAKKKMQVDLEKELQSAFNEITKLTSLIDGKVPKDLLCN---LELEGKITDLQKELNKEV 733
Cdd:TIGR02169 361 ELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSeelADLNAAIAGIEAKINELE 440
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 734 EENEALREEVILLS-ELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEE----------IGKTK 802
Cdd:TIGR02169 441 EEKEDKALEIKKQEwKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERvrggraveevLKASI 520
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 803 DDLATTQSNYKSTDQEFQnfKTLHMDFEQKYKMVLEENERMNQEIVNLSKE---------------AQKFDSSLGALKTE 867
Cdd:TIGR02169 521 QGVHGTVAQLGSVGERYA--TAIEVAAGNRLNNVVVEDDAVAKEAIELLKRrkagratflplnkmrDERRDLSILSEDGV 598
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 868 LSYKTQ--ELQEKTREVQER-------LNEMEQLKEQLEN-RDSTL--QTVER----------EKTLITEKLQQtLEEVK 925
Cdd:TIGR02169 599 IGFAVDlvEFDPKYEPAFKYvfgdtlvVEDIEAARRLMGKyRMVTLegELFEKsgamtggsraPRGGILFSRSE-PAELQ 677
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 926 TLTQEKDDLKQLQESLQIERDQLKSDIHDTVNMNIDTQEQLRNALESLKQHQETINTLKSKISEEVSRNLHMEENTGETK 1005
Cdd:TIGR02169 678 RLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVK 757
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1006 DEFQQKMVGIDKKQdLEAKNTQTLTADVKDNEIIEQQRKIFSLIQEKNELQQMLESVIAEKEQL---KTDLKENIEMTIE 1082
Cdd:TIGR02169 758 SELKELEARIEELE-EDLHKLEEALNDLEARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKlnrLTLEKEYLEKEIQ 836
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1083 NQEELRLLGDELKKqqeivaqeknhAIKKEGELSRTcdRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIEN 1162
Cdd:TIGR02169 837 ELQEQRIDLKEQIK-----------SIEKEIENLNG--KKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELER 903
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1163 LKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKERKVLKELQKSFETERDHLRGYIREIEATG------LQTKEE 1236
Cdd:TIGR02169 904 KIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELSLEDVQAELQRVEEEIRALEpvnmlaIQEYEE 983
|
810 820
....*....|....*....|....*....
gi 767930923 1237 LKIAHIHLKEHQETIDELRRSVSEKTAQI 1265
Cdd:TIGR02169 984 VLKRLDELKEKRAKLEEERKAILERIEEY 1012
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1355-1949 |
1.17e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 73.82 E-value: 1.17e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1355 KTIKEALEVKHDQLK-EHIRETLAKIQESQSKQEqslnmkEKDNETTKIVSEMEQfkpKDSALLRIEIEMLGLSKRLQES 1433
Cdd:COG1196 216 RELKEELKELEAELLlLKLRELEAELEELEAELE------ELEAELEELEAELAE---LEAELEELRLELEELELELEEA 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1434 HDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKvahcclkEQEETINELRVNLSEKETEISTIQKQ 1513
Cdd:COG1196 287 QAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELE-------ELEEELEELEEELEEAEEELEEAEAE 359
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1514 LEAINDKLQNKIQEIYEKEEQfnikQISEVQEKVNELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQIMIKEKE 1593
Cdd:COG1196 360 LAEAEEALLEAEAELAEAEEE----LEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEE 435
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1594 EMKRVQEALQIERDQLKENTKEIVAKMKESQEKEYQFLKmtAVNETQEKMCEIEHLKEQFETQKLNLENIETENIrlTQI 1673
Cdd:COG1196 436 EEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAAL--LEAALAELLEELAEAAARLLLLLEAEADYEGFLE--GVK 511
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1674 LHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETITRDLEKQEELKIVHmhLKEHQETIDKLRGIVSEKTNEISN 1753
Cdd:COG1196 512 AALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEY--LKAAKAGRATFLPLDKIRARAALA 589
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1754 mqkDLEHSNDALKAQDLkIQEELRIAHMHLKEQQETidkLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLI 1833
Cdd:COG1196 590 ---AALARGAIGAAVDL-VASDLREADARYYVLGDT---LLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSL 662
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1834 TLKKDVNETQKKVSEMEQLKKQIKDQSLTLSKLEIENLNLAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQ 1913
Cdd:COG1196 663 TGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELL 742
|
570 580 590
....*....|....*....|....*....|....*.
gi 767930923 1914 ETKARDLEIQQELKTARMLSKEHKETVDKLREKISE 1949
Cdd:COG1196 743 EEEELLEEEALEELPEPPDLEELERELERLEREIEA 778
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
649-1210 |
2.31e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 73.05 E-value: 2.31e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 649 LELKEKMKELattykqmenDIQLYQSQLEAKKKMQVDLEKELQSAFNEITKLTSLIDgkvpkdllcnlELEGKITDLQKE 728
Cdd:COG1196 216 RELKEELKEL---------EAELLLLKLRELEAELEELEAELEELEAELEELEAELA-----------ELEAELEELRLE 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 729 LNKEVEENEALREEVILLSelkslpSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATT 808
Cdd:COG1196 276 LEELELELEEAQAEEYELL------AELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEA 349
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 809 QSNYKSTDQEFQNFKTLHMDFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNE 888
Cdd:COG1196 350 EEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEA 429
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 889 MEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIHDTVNMNIDTQEQLRN 968
Cdd:COG1196 430 LAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEG 509
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 969 ALESLKqhqetiNTLKSKISEEVSRNLHMEE---------------NTGETKDEFQQKMVGIDKKQDL---------EAK 1024
Cdd:COG1196 510 VKAALL------LAGLRGLAGAVAVLIGVEAayeaaleaalaaalqNIVVEDDEVAAAAIEYLKAAKAgratflpldKIR 583
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1025 NTQTLTADVKDNEIIEQQRKIFSLIQEKNELQQMLESVIAEKEQLKTDLKENIEMTIENQEELRLLGDELKKQQEIVAQE 1104
Cdd:COG1196 584 ARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLT 663
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1105 KNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNKELTLEHMETERLEL 1184
Cdd:COG1196 664 GGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLE 743
|
570 580 590
....*....|....*....|....*....|.
gi 767930923 1185 AQKLN-----ENYEEVKSITKERKVLKELQK 1210
Cdd:COG1196 744 EEELLeeealEELPEPPDLEELERELERLER 774
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1441-1971 |
3.62e-12 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 72.38 E-value: 3.62e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1441 AKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVnlseketeistiqkqLEAINDK 1520
Cdd:PRK02224 198 EKEEKDLHERLNGLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERREELET---------------LEAEIED 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1521 LQNKIQEIYEKEEQFNiKQISEVQEKVNELKQFKEHRKAK----DSALQSIESKMLELTNRLQESQEEIQIMIKEKEEMK 1596
Cdd:PRK02224 263 LRETIAETEREREELA-EEVRDLRERLEELEEERDDLLAEagldDADAEAVEARREELEDRDEELRDRLEECRVAAQAHN 341
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1597 RVQEALQIERDQLKENTKEIVAKMKESqEKEYQFLKmTAVNETQEKMC----EIEHLKEQFETQKLNLENIETENirltQ 1672
Cdd:PRK02224 342 EEAESLREDADDLEERAEELREEAAEL-ESELEEAR-EAVEDRREEIEeleeEIEELRERFGDAPVDLGNAEDFL----E 415
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1673 ILHENLEEMRSVTKE-RDDLRSVEETLKVERDQLKENLRETITRDLEKQEELKIvhmhLKEHQETIDKLRGIVSEKTNEI 1751
Cdd:PRK02224 416 ELREERDELREREAElEATLRTARERVEEAEALLEAGKCPECGQPVEGSPHVET----IEEDRERVEELEAELEDLEEEV 491
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1752 SNMQKDLEHSNDALKAQDlKIQEelriahmhLKEQQETIDKL----RGIVSEKTDKLSNMQKDLENSNAKLQEKiqELKA 1827
Cdd:PRK02224 492 EEVEERLERAEDLVEAED-RIER--------LEERREDLEELiaerRETIEEKRERAEELRERAAELEAEAEEK--REAA 560
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1828 NEhqlitLKKDVNETQKKVSEMEQLKKQIKDqsltlsklEIENLNlaqKLHENLEEMKSVMKERDNLRRVEETLKLERDQ 1907
Cdd:PRK02224 561 AE-----AEEEAEEAREEVAELNSKLAELKE--------RIESLE---RIRTLLAAIADAEDEIERLREKREALAELNDE 624
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 767930923 1908 LKESLQETKARDLEIQQELKTARM-LSKEHKETVDKLREKISEKTiqisdiqKDLDKSKDELQKK 1971
Cdd:PRK02224 625 RRERLAEKRERKRELEAEFDEARIeEAREDKERAEEYLEQVEEKL-------DELREERDDLQAE 682
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
345-1131 |
4.74e-12 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 72.01 E-value: 4.74e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 345 LKRYRKEIMDLKKQLEEVSLETRAQAMEKDQLAQLLEEKDLLQKVQNEKIENLTRMLVTSSSL--TLQQELKAKRKRRvt 422
Cdd:TIGR02168 234 LEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEisRLEQQKQILRERL-- 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 423 wclgkinkmknsNYADQFNIPTNITTKTHKLSINLLREIDESVCSESDVFSNTLDTLSEIEWNPATKLLNQEN----IES 498
Cdd:TIGR02168 312 ------------ANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESrleeLEE 379
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 499 ELNSLRADYDNLVLDYEQLRTEKEEMELKLKE-----KNDLDEFEALERKTKKDQEMQLIHEISNLKNLVKHAEVYNQDL 573
Cdd:TIGR02168 380 QLETLRSKVAQLELQIASLNNEIERLEARLERledrrERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERL 459
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 574 ENELSSKVELLREKEDQIKKLQEYIDSqklenikmdLSYSLESIEDPKQMKQTLFDAETVALDAKRESAFLR---SENLE 650
Cdd:TIGR02168 460 EEALEELREELEEAEQALDAAERELAQ---------LQARLDSLERLQENLEGFSEGVKALLKNQSGLSGILgvlSELIS 530
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 651 LKEKMKELATTYkqMENDIQLYQSQLEAKKKMQVDLEKELQSAFNEITKLTSLIDGKVPKDLLCNLELEGKITDLQKELn 730
Cdd:TIGR02168 531 VDEGYEAAIEAA--LGGRLQAVVVENLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDL- 607
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 731 keVEENEALReevILLSELKSLPSEVERLRKEIQDKSEELH---IITSEKDKLFSEVV---HKESRVQGLLE---EIGKT 801
Cdd:TIGR02168 608 --VKFDPKLR---KALSYLLGGVLVVDDLDNALELAKKLRPgyrIVTLDGDLVRPGGVitgGSAKTNSSILErrrEIEEL 682
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 802 KDDLATTQSNYKSTDQEFQNFKTLHMDFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALktelsykTQELQEKTRE 881
Cdd:TIGR02168 683 EEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQL-------EERIAQLSKE 755
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 882 VQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSdihdtvnmnid 961
Cdd:TIGR02168 756 LTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRE----------- 824
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 962 TQEQLRNALESLKQHQETINTLKSKISEEVSRNLHMEENTGETKDEFQQKMVGIDKKQDL--EAKNTQTLTADVKDNEII 1039
Cdd:TIGR02168 825 RLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASleEALALLRSELEELSEELR 904
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1040 EQQRKIFSLIQEKNELQQMLESVIAEKEQLKTDLKENIEMTienQEELRLLGDELKKQQEivaqeknhaiKKEGELSRTC 1119
Cdd:TIGR02168 905 ELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERL---SEEYSLTLEEAEALEN----------KIEDDEEEAR 971
|
810
....*....|..
gi 767930923 1120 DRLAEVEEKLKE 1131
Cdd:TIGR02168 972 RRLKRLENKIKE 983
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
731-1362 |
8.16e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 71.12 E-value: 8.16e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 731 KEVEEN----EALREEVIllSELKSLPSEVERLRK--EIQDKSEELhiitsEKDKLFSEVVHKESRVQGLLEEIGKTKDD 804
Cdd:COG1196 182 EATEENlerlEDILGELE--RQLEPLERQAEKAERyrELKEELKEL-----EAELLLLKLRELEAELEELEAELEELEAE 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 805 LATTQSNYKSTDQEFQNFKTLHMDFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQE 884
Cdd:COG1196 255 LEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEE 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 885 RLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIHDTVNMNIDTQE 964
Cdd:COG1196 335 LEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLE 414
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 965 QLRNALESLKQHQETINTLKSKISEEVSRNLHMEENTGETKDEFQQKMVGIDKKQDLEAKNTQTLtaDVKDNEIIEQQRK 1044
Cdd:COG1196 415 RLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAAL--AELLEELAEAAAR 492
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1045 IFSLIQEKNELQQMLESVIAEKEQLKTDLKEniemtienQEELRLLGDELKKQQEIV----AQEKNHAIKKEGELSRTCD 1120
Cdd:COG1196 493 LLLLLEAEADYEGFLEGVKAALLLAGLRGLA--------GAVAVLIGVEAAYEAALEaalaAALQNIVVEDDEVAAAAIE 564
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1121 RLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNKELTL-EHMETERLELAQKLNENYEEVKSIT 1199
Cdd:COG1196 565 YLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLgDTLLGRTLVAARLEAALRRAVTLAG 644
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1200 KERKVLKE---LQKSFETERDHLRGYIREIEATGLQTKEELKIAHIHLKEHQETIDELRRSVSEKTAQIINTQDLEKSHT 1276
Cdd:COG1196 645 RLREVTLEgegGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEE 724
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1277 KLQEEIPVLHEEQELLPNVKEVSETQETMNELELLTEQSTTKDSTTLARIEMERL-RLN----EKFQESQEEIKSLTKER 1351
Cdd:COG1196 725 ALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEALgPVNllaiEEYEELEERYDFLSEQR 804
|
650
....*....|.
gi 767930923 1352 DNLKTIKEALE 1362
Cdd:COG1196 805 EDLEEARETLE 815
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1455-2030 |
1.75e-11 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 70.05 E-value: 1.75e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1455 QSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQ--NKIQEIYEKE 1532
Cdd:TIGR04523 32 DTEEKQLEKKLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINklNSDLSKINSE 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1533 EQFNIKQISEVQEKVNELKQFKEHRKA-----------KDSALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEA 1601
Cdd:TIGR04523 112 IKNDKEQKNKLEVELNKLEKQKKENKKnidkflteikkKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDK 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1602 LQIERDQLKENTKEIVAKMKESQEKEYQFLKMTAVNET-----QEKMCEIEHLKEQFETQKLNLENIETENIRLTQILHE 1676
Cdd:TIGR04523 192 IKNKLLKLELLLSNLKKKIQKNKSLESQISELKKQNNQlkdniEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSE 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1677 NLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETITRDLekQEELKIVHMHLKEHQETIDKLRGIVSEKTNEISNMQK 1756
Cdd:TIGR04523 272 KQKELEQNNKKIKELEKQLNQLKSEISDLNNQKEQDWNKEL--KSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKK 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1757 DLEHSNDALKAQDLKIQEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDlENSNAKLQEKIQELKANEHQLitlk 1836
Cdd:TIGR04523 350 ELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQ-EKLNQQKDEQIKKLQQEKELL---- 424
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1837 kdVNETQKKVSEMEQLKKQIKDQSLTLSKLEIENLNLAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETK 1916
Cdd:TIGR04523 425 --EKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLN 502
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1917 ARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKDLDKSKDEL---------QKKDRQNHQVKPEKRLLSD 1987
Cdd:TIGR04523 503 EEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFELkkenlekeiDEKNKEIEELKQTQKSLKK 582
|
570 580 590 600
....*....|....*....|....*....|....*....|...
gi 767930923 1988 GQQHLTESLREKCSRIKELLKRYSEMDDHYECLNRLSLDLEKE 2030
Cdd:TIGR04523 583 KQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKE 625
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1121-1741 |
2.11e-11 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 69.68 E-value: 2.11e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1121 RLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSITK 1200
Cdd:PRK02224 214 ELAELDEEIERYEEQREQARETRDEADEVLEEHEERREELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEE 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1201 ERKVLKElqksfETERDHLrgyirEIEATGLQtKEELkiahihlkehQETIDELRRSVSEKTAQIintQDLEKSHTKLQE 1280
Cdd:PRK02224 294 ERDDLLA-----EAGLDDA-----DAEAVEAR-REEL----------EDRDEELRDRLEECRVAA---QAHNEEAESLRE 349
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1281 EIPVLHEEQEllpnvkevsETQETMNELEllTEQSTTKDSTTLARIEMERLRlnEKFQESQEEIKSLTKERDNLKTIKEA 1360
Cdd:PRK02224 350 DADDLEERAE---------ELREEAAELE--SELEEAREAVEDRREEIEELE--EEIEELRERFGDAPVDLGNAEDFLEE 416
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1361 LEVKHDQLKEHIRETLAKIQESQSKQEQSLNMKEKDNettkiVSEMEQfkpkdsallriEIEMLGLSKRLQESHDEMKSV 1440
Cdd:PRK02224 417 LREERDELREREAELEATLRTARERVEEAEALLEAGK-----CPECGQ-----------PVEGSPHVETIEEDRERVEEL 480
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1441 AKEKDDLQRLQEVLQSESDQLKEnikeivAKHLETEEELkvahccLKEQEETINELrvnLSEKETEISTIQKQLEAINDK 1520
Cdd:PRK02224 481 EAELEDLEEEVEEVEERLERAED------LVEAEDRIER------LEERREDLEEL---IAERRETIEEKRERAEELRER 545
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1521 LQNKIQEIYEKEEQFNiKQISEVQEKVNELKQFKEHRKAKDSALQSIeskmleltNRLQESQEEIQIMIKEKEEMKRVQE 1600
Cdd:PRK02224 546 AAELEAEAEEKREAAA-EAEEEAEEAREEVAELNSKLAELKERIESL--------ERIRTLLAAIADAEDEIERLREKRE 616
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1601 ALQIERDQLKENTKEIVAKMKESQEKeyqfLKMTAVNETQEKmceiehlKEQFETQklnLENIEtenirltqilhenlEE 1680
Cdd:PRK02224 617 ALAELNDERRERLAEKRERKRELEAE----FDEARIEEARED-------KERAEEY---LEQVE--------------EK 668
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 767930923 1681 MRSVTKERDDLRSVEETLKVERDQLkENLRETITRDLEKQEELKIVHMHLKEHQETIDKLR 1741
Cdd:PRK02224 669 LDELREERDDLQAEIGAVENELEEL-EELRERREALENRVEALEALYDEAEELESMYGDLR 728
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
1040-1845 |
2.67e-11 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 69.62 E-value: 2.67e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1040 EQQRKIFSLIQEKNELQQMLESVIAEKEQLKTDLKENIEMTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTC 1119
Cdd:pfam02463 206 AKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQE 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1120 DRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKIN-----------EIENLKNELKNKELTLEHMETERLELAQKL 1188
Cdd:pfam02463 286 EELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKkaekelkkekeEIEELEKELKELEIKREAEEEEEEELEKLQ 365
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1189 NENYEEVKSITKERKVLKELQKSFETERDHLRGYIREIEATGLQTKEELKIAHIHLKEHQETIDElRRSVSEKTAQIINT 1268
Cdd:pfam02463 366 EKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELE-ILEEEEESIELKQG 444
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1269 QDLEKSHTKLQEEIPVLHEEQELLPNVKEVSETQETMNELELLTEQSTTKD--STTLARIEMERLRLNEKFQESQEEIKS 1346
Cdd:pfam02463 445 KLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLeeRSQKESKARSGLKVLLALIKDGVGGRI 524
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1347 LTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQSLNMKEKDNETTKIVSEMEQFKPKDSALLRIEIEMLGL 1426
Cdd:pfam02463 525 ISAHGRLGDLGVAVENYKVAISTAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILN 604
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1427 SKRLQES------HDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNL 1500
Cdd:pfam02463 605 LAQLDKAtleadeDDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEK 684
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1501 SEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQFNIKQISEVQEKVNELKQFKEHRKAKDSALQSIESKMLELTNRLQE 1580
Cdd:pfam02463 685 AESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEE 764
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1581 SQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKMKESQEKEYQFLKMTAVNETQEKMCEIEhlkeqfETQKLNL 1660
Cdd:pfam02463 765 EKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIK------EEELEEL 838
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1661 ENIETENIRLTQILHENLEEMRSVTKERDDLRsvEETLKVERDQLKENLRETITRDLEKQEELKIVHMHLKEHQETIDKL 1740
Cdd:pfam02463 839 ALELKEEQKLEKLAEEELERLEEEITKEELLQ--ELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKE 916
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1741 RGIVSEKTNEISNMQKDLEHSNDALKAQDLKIQEElriaHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQE 1820
Cdd:pfam02463 917 NEIEERIKEEAEILLKYEEEPEELLLEEADEKEKE----ENNKEEEEERNKRLLLAKEELGKVNLMAIEEFEEKEERYNK 992
|
810 820
....*....|....*....|....*
gi 767930923 1821 KIQELKANEHQLITLKKDVNETQKK 1845
Cdd:pfam02463 993 DELEKERLEEEKKKLIRAIIEETCQ 1017
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1579-2021 |
2.84e-11 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 69.30 E-value: 2.84e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1579 QESQEEIQIMIKEKEEmKRVQEALQIERDQLKENTKEIvaKMKESQEKEYQFLKMTA---VNETQEKMCEIEHLKEQFET 1655
Cdd:PRK02224 186 RGSLDQLKAQIEEKEE-KDLHERLNGLESELAELDEEI--ERYEEQREQARETRDEAdevLEEHEERREELETLEAEIED 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1656 QKLNLENIETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETITRDLEKQEELKIVHMHLKEHQE 1735
Cdd:PRK02224 263 LRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNE 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1736 TIDKLRGIVsektneisnmqKDLEHSNDALKAQDLKIQEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSN 1815
Cdd:PRK02224 343 EAESLREDA-----------DDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAE 411
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1816 AKLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQLKKQIK----DQsltlsklEIENLNLAQKLHENLEEMKSVMKER 1891
Cdd:PRK02224 412 DFLEELREERDELREREAELEATLRTARERVEEAEALLEAGKcpecGQ-------PVEGSPHVETIEEDRERVEELEAEL 484
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1892 DNLRRVEETLKLERDQLkESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKDLDKSKDELQKK 1971
Cdd:PRK02224 485 EDLEEEVEEVEERLERA-EDLVEAEDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEA 563
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 767930923 1972 DRQNHQVKPEKRLLSDGQQHLTESlREKCSRIKELLKRYSEMDDHYECLN 2021
Cdd:PRK02224 564 EEEAEEAREEVAELNSKLAELKER-IESLERIRTLLAAIADAEDEIERLR 612
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
582-1375 |
3.13e-11 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 69.33 E-value: 3.13e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 582 ELLREKED---QIKKLQEYIDSqkLENIKMDLSYSLESIEDPKQMKQTLFDAETVALDAKRESaflrsENLELKEKMKEL 658
Cdd:TIGR02169 227 ELLKEKEAlerQKEAIERQLAS--LEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEE-----EQLRVKEKIGEL 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 659 attykqmENDIQLYQSQLEAKKKMQVDLEKELQSAFNEITKLTSLIDgkvpkdllcnlELEGKITDLQKELNKEVEENEA 738
Cdd:TIGR02169 300 -------EAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIE-----------ELEREIEEERKRRDKLTEEYAE 361
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 739 LREEV-ILLSELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQ 817
Cdd:TIGR02169 362 LKEELeDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEE 441
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 818 EFQNFKTLHMDFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLE 897
Cdd:TIGR02169 442 EKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQ 521
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 898 NRDST---LQTVEREKTLITE-----KLQQTLEEVKTLTQEKDDL---------------KQLQESLQIERDQLKSDIHD 954
Cdd:TIGR02169 522 GVHGTvaqLGSVGERYATAIEvaagnRLNNVVVEDDAVAKEAIELlkrrkagratflplnKMRDERRDLSILSEDGVIGF 601
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 955 TVNMnIDTQEQLRNALESLKQHQETINTLKSkiSEEVSRNLHMEENTGETKDEfQQKMVGIDKKQDLEAKNTQTLTAdvk 1034
Cdd:TIGR02169 602 AVDL-VEFDPKYEPAFKYVFGDTLVVEDIEA--ARRLMGKYRMVTLEGELFEK-SGAMTGGSRAPRGGILFSRSEPA--- 674
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1035 dnEIIEQQRKIFSLIQEKNELQQMLESVIAEKEQLKTDLKENIEMTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGE 1114
Cdd:TIGR02169 675 --ELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQE 752
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1115 LSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEE--MSEMQKKINEIENLKNELKNKELTLEHMETERLELAQKLNENY 1192
Cdd:TIGR02169 753 IENVKSELKELEARIEELEEDLHKLEEALNDLEARlsHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLE 832
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1193 EEVKSITKERKVLKELQKSFETERDHLRGYIREIEATGLQTK---EELKIAHIHLK----EHQETIDELRRSVSEKTAQI 1265
Cdd:TIGR02169 833 KEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEaalRDLESRLGDLKkerdELEAQLRELERKIEELEAQI 912
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1266 intQDLEKSHTKLQEEIPVLHEE-QELLPNVKEVSETQETMNELELLTE--QSTTKDSTTLARIEMerlRLNEKFQESQE 1342
Cdd:TIGR02169 913 ---EKKRKRLSELKAKLEALEEElSEIEDPKGEDEEIPEEELSLEDVQAelQRVEEEIRALEPVNM---LAIQEYEEVLK 986
|
810 820 830
....*....|....*....|....*....|...
gi 767930923 1343 EIKSLTKERDNLKTIKEALEVKHDQLKEHIRET 1375
Cdd:TIGR02169 987 RLDELKEKRAKLEEERKAILERIEEYEKKKREV 1019
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
828-1412 |
3.79e-11 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 68.94 E-value: 3.79e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 828 DFEQKYKMVLEENERMNQEIVNLskeaQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVE 907
Cdd:PRK03918 159 DYENAYKNLGEVIKEIKRRIERL----EKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELE 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 908 REKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSdihdtvnmnidtQEQLRNALESLKQHQETINTLKSKI 987
Cdd:PRK03918 235 ELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEE------------LEEKVKELKELKEKAEEYIKLSEFY 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 988 SEEVSRNLHMEENTGETKDEFQQKMVGIDKKQDLEAKNTQTLtadvkdnEIIEQQRKIFSLIQEKNELQQMLESVIAEKE 1067
Cdd:PRK03918 303 EEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLEELK-------KKLKELEKRLEELEERHELYEEAKAKKEELE 375
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1068 QLKTdlkeniEMTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLKE---------KSQQLQE 1138
Cdd:PRK03918 376 RLKK------RLTGLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKakgkcpvcgRELTEEH 449
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1139 KQQQLLNVQEEMSEMQKKINEIENLKNELKNKELTLEhMETERLELAQKLNENYEEVKSITKERKV--LKELQKSFEtER 1216
Cdd:PRK03918 450 RKELLEEYTAELKRIEKELKEIEEKERKLRKELRELE-KVLKKESELIKLKELAEQLKELEEKLKKynLEELEKKAE-EY 527
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1217 DHLRGYIREIEATGLQTKEELKIAHiHLKEHQETIDELRRSVSEKTAQIINT------QDLEKSHTKLQEEIPVLHEEQE 1290
Cdd:PRK03918 528 EKLKEKLIKLKGEIKSLKKELEKLE-ELKKKLAELEKKLDELEEELAELLKEleelgfESVEELEERLKELEPFYNEYLE 606
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1291 LLPNVKEVSETQETMNELELLTEQSTTKDSTTLARIEMERLRLNEKFQE-SQEEIKSLTKERDNLKTIKEALEVKHDQLK 1369
Cdd:PRK03918 607 LKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKySEEEYEELREEYLELSRELAGLRAELEELE 686
|
570 580 590 600
....*....|....*....|....*....|....*....|...
gi 767930923 1370 EHIRETLAKIQESQSKQEQSLNMKEKDNETTKIVSEMEQFKPK 1412
Cdd:PRK03918 687 KRREEIKKTLEKLKEELEEREKAKKELEKLEKALERVEELREK 729
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
660-1366 |
5.12e-11 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 68.51 E-value: 5.12e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 660 TTYKQMENDIQLYQSQLEAKKKMQVDLEKELQSAFNEITKLTSLIDG--KVPKDLLCNLELEG-KITDLQKELNKEVEEN 736
Cdd:TIGR04523 33 TEEKQLEKKLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKIleQQIKDLNDKLKKNKdKINKLNSDLSKINSEI 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 737 EALREEVILL-SELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKST 815
Cdd:TIGR04523 113 KNDKEQKNKLeVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKI 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 816 DQEFQNFKTLHMDFEQKykmvLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQ 895
Cdd:TIGR04523 193 KNKLLKLELLLSNLKKK----IQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQ 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 896 LENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDdlkqlqeslQIERDQLKSDIHDTVNMNIDTQEQLRNALESLKQ 975
Cdd:TIGR04523 269 LSEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQKE---------QDWNKELKSELKNQEKKLEEIQNQISQNNKIISQ 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 976 HQETINTLKSKI----SEEVSRNLHMEENTGETKDEFQQKMVGIDKKQDLEaKNTQTLTADVKDNEIIEQQR--KIFSLI 1049
Cdd:TIGR04523 340 LNEQISQLKKELtnseSENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLE-SQINDLESKIQNQEKLNQQKdeQIKKLQ 418
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1050 QEKNELQQMLESVIAEKEQLKTDLK-------------ENIEMTIENQEE-LRLLGDELKKQQEIVAQEKNHAIKKEGEL 1115
Cdd:TIGR04523 419 QEKELLEKEIERLKETIIKNNSEIKdltnqdsvkeliiKNLDNTRESLETqLKVLSRSINKIKQNLEQKQKELKSKEKEL 498
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1116 SRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNkELTLEHMETERLELAQKLNENYEEV 1195
Cdd:TIGR04523 499 KKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDF-ELKKENLEKEIDEKNKEIEELKQTQ 577
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1196 KSITKERKVLKELQKSFETERDHLRGYIREIEATGLQTKEELKIAHIHLKEHQETIDELRRSVSEKTAQIINTQDLEKSH 1275
Cdd:TIGR04523 578 KSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETIKEI 657
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1276 TKLQEEIpvLHEEQELLPNVKEVSETQETMNELELLTEQSTTKDSTTlariEMERLRLNEKFQESQEEIKSLTKERDNLK 1355
Cdd:TIGR04523 658 RNKWPEI--IKKIKESKTKIDDIIELMKDWLKELSLHYKKYITRMIR----IKDLPKLEEKYKEIEKELKKLDEFSKELE 731
|
730
....*....|.
gi 767930923 1356 TIKEALEVKHD 1366
Cdd:TIGR04523 732 NIIKNFNKKFD 742
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1112-1707 |
7.35e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 68.04 E-value: 7.35e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1112 EGELSRTCDRLAEVE----------EKLK---------------------------------EKSQQLQEKQQQLLNVQE 1148
Cdd:COG1196 178 ERKLEATEENLERLEdilgelerqlEPLErqaekaeryrelkeelkeleaellllklreleaELEELEAELEELEAELEE 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1149 EMSEMQKKINEIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKERKVLKELQKSFETERDHLRGYIREIEA 1228
Cdd:COG1196 258 LEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEE 337
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1229 TGLQTKEELKIAHIHLKEHQETIDELRRSVSEKTAQIINTQDLEKSHTKLQEEIpvLHEEQELLPNVKEVSETQETMNEL 1308
Cdd:COG1196 338 ELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEA--LRAAAELAAQLEELEEAEEALLER 415
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1309 ELLTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQ 1388
Cdd:COG1196 416 LERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLL 495
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1389 SLNMKEKDNETTKIVSEMEQfKPKDSALLRIEIEMLG------------LSKRLQESHDEMKSVAKEKDDL---QRLQEV 1453
Cdd:COG1196 496 LLEAEADYEGFLEGVKAALL-LAGLRGLAGAVAVLIGveaayeaaleaaLAAALQNIVVEDDEVAAAAIEYlkaAKAGRA 574
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1454 LQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEE 1533
Cdd:COG1196 575 TFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGE 654
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1534 QFNIKQISEVQEKVNELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEiqimiKEKEEMKRVQEALQIERDQLKENT 1613
Cdd:COG1196 655 GGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEE-----ERELAEAEEERLEEELEEEALEEQ 729
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1614 KEIVAKMKESQEKEYQFLKMTAVNETQEKMCEIEHLKEQFETQKLNLENIETENIRLtqilhenLEEMRSVTKERDDLRS 1693
Cdd:COG1196 730 LEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEALGPVNLLA-------IEEYEELEERYDFLSE 802
|
650
....*....|....
gi 767930923 1694 VEETLKVERDQLKE 1707
Cdd:COG1196 803 QREDLEEARETLEE 816
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1154-1995 |
1.08e-10 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 67.86 E-value: 1.08e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1154 QKKINEIENLKNELKNKELTLEHMETERLELAQKLNE---NYEEVKSITKERKV--LKELQKSFETERDHLRGYIREIEa 1228
Cdd:PTZ00121 1083 AKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEakkKAEDARKAEEARKAedARKAEEARKAEDAKRVEIARKAE- 1161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1229 tglqtkEELKIAHIHLKEHQETIDELRRSVSEKTAQiintqDLEKSHTKLQEEIPVLHEEQEllpNVKEVSETQETMNEL 1308
Cdd:PTZ00121 1162 ------DARKAEEARKAEDAKKAEAARKAEEVRKAE-----ELRKAEDARKAEAARKAEEER---KAEEARKAEDAKKAE 1227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1309 ELLTEQSTTKDSTTLARIEMERLRLN-EKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIREtlAKIQESQSKQE 1387
Cdd:PTZ00121 1228 AVKKAEEAKKDAEEAKKAEEERNNEEiRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADE--AKKAEEKKKAD 1305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1388 QSLNMKEKDNETTKIVSEMEQFKPKDSALlrieiemlglSKRLQEshdemksvAKEKDDLQRLQEvlQSESDQLKENIKE 1467
Cdd:PTZ00121 1306 EAKKKAEEAKKADEAKKKAEEAKKKADAA----------KKKAEE--------AKKAAEAAKAEA--EAAADEAEAAEEK 1365
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1468 IVAKHLETEEELKVAHCCLKEQEETinelrvnlsEKETEISTIQKQLEAINDKLQNKIQEIYEKEEqfnIKQISEVQEKV 1547
Cdd:PTZ00121 1366 AEAAEKKKEEAKKKADAAKKKAEEK---------KKADEAKKKAEEDKKKADELKKAAAAKKKADE---AKKKAEEKKKA 1433
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1548 NEL-KQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLK---ENTKEIVAKMKES 1623
Cdd:PTZ00121 1434 DEAkKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKkadEAKKAAEAKKKAD 1513
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1624 QEKEYQFLKMTAVNETQEKMCEIEHLKEQFETQKLNlENIETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERD 1703
Cdd:PTZ00121 1514 EAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKAD-ELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEA 1592
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1704 QLKENLRETITRDLEKQEELKivhmhlKEHQETIdKLRGIVSEKTNEISNMQKDLEHSNDALKAQDLKIQEELRIAHMHL 1783
Cdd:PTZ00121 1593 RIEEVMKLYEEEKKMKAEEAK------KAEEAKI-KAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAE 1665
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1784 KEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLI----TLKKDVNETQKKVSEMEQLKKQIKDQ 1859
Cdd:PTZ00121 1666 EAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKkkaeELKKAEEENKIKAEEAKKEAEEDKKK 1745
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1860 SLTLSKLEIENLNLAQKLHENLEEMKSVMKERDNL--RRVEETLKLERDQLKESLQETKARDLEIQQELKTARMLSKEHK 1937
Cdd:PTZ00121 1746 AEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVieEELDEEDEKRRMEVDKKIKDIFDNFANIIEGGKEGNLVINDSK 1825
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 767930923 1938 ETVD-KLREKISEKTIQISD---IQKDLDKSKDELQKKDRQNHQVKPEKRLLSDGQQHLTES 1995
Cdd:PTZ00121 1826 EMEDsAIKEVADSKNMQLEEadaFEKHKFNKNNENGEDGNKEADFNKEKDLKEDDEEEIEEA 1887
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
726-1659 |
1.68e-10 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 66.99 E-value: 1.68e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 726 QKELNKEVEENEALREEVILLSELKSLPSEVERLRKEIQDKSEELHIITSEKdKLFSEVVHKESRVQgllEEIGKTKDDL 805
Cdd:TIGR00606 158 QEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVQEHQMEL-KYLKQYKEKACEIR---DQITSKEAQL 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 806 ATTQSNYKSTDQEFQNFKTLhmdfeqkykmvLEENERMNQEIVNLSKEAQKFDSSlgalKTELSYKTQELQEKTREVQER 885
Cdd:TIGR00606 234 ESSREIVKSYENELDPLKNR-----------LKEIEHNLSKIMKLDNEIKALKSR----KKQMEKDNSELELKMEKVFQG 298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 886 LNEmeQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDL--KQLQESLQIERDQLKSDIHDTVNMNIDTQ 963
Cdd:TIGR00606 299 TDE--QLNDLYHNHQRTVREKERELVDCQRELEKLNKERRLLNQEKTELlvEQGRLQLQADRHQEHIRARDSLIQSLATR 376
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 964 EQLRNALESLKQHQETINTLKSKISEEVSRNLHMEENTGETKDEFQQKMVGIDKKQDLEAKNTQTLtadvkDNEIIEQQR 1043
Cdd:TIGR00606 377 LELDGFERGPFSERQIKNFHTLVIERQEDEAKTAAQLCADLQSKERLKQEQADEIRDEKKGLGRTI-----ELKKEILEK 451
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1044 KIFSLIQEKNELQQMLESV--IAEKEQLKTDLKENIEMTIENQEELRLLGDE--LKKQQEIVAQEKNHAIKKEGELSRTC 1119
Cdd:TIGR00606 452 KQEELKFVIKELQQLEGSSdrILELDQELRKAERELSKAEKNSLTETLKKEVksLQNEKADLDRKLRKLDQEMEQLNHHT 531
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1120 DRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSIT 1199
Cdd:TIGR00606 532 TTRTQMEMLTKDKMDKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHIN 611
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1200 KERKVLKELQKSFETerdhlrgyiREIEATGLQTkEELKIAhiHLKEHQETIDELRRSVSEKTAqiINTQDLEKSHTKLQ 1279
Cdd:TIGR00606 612 NELESKEEQLSSYED---------KLFDVCGSQD-EESDLE--RLKEEIEKSSKQRAMLAGATA--VYSQFITQLTDENQ 677
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1280 EEIPVLHEEQELLPNVKEVSETQETM--------NELELLTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKER 1351
Cdd:TIGR00606 678 SCCPVCQRVFQTEAELQEFISDLQSKlrlapdklKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVN 757
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1352 DNLKTIKEALEVKHDQLKE-HIRETLAKIQESQSKQEQSLNMKEKDNEtTKIVSEMEQFKPKDSALLRIEiemlgLSKRL 1430
Cdd:TIGR00606 758 RDIQRLKNDIEEQETLLGTiMPEEESAKVCLTDVTIMERFQMELKDVE-RKIAQQAAKLQGSDLDRTVQQ-----VNQEK 831
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1431 QESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNLSEKETEISTI 1510
Cdd:TIGR00606 832 QEKQHELDTVVSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQD 911
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1511 QKQLEAINDKLQNKIQEIYEKEEQFNIKQIsEVQEKVNELKQFKEHRK--------AKDSALQSIESKMLELTNRLQESQ 1582
Cdd:TIGR00606 912 SPLETFLEKDQQEKEELISSKETSNKKAQD-KVNDIKEKVKNIHGYMKdienkiqdGKDDYLKQKETELNTVNAQLEECE 990
|
890 900 910 920 930 940 950
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 767930923 1583 EEIQIMIKEKEEMKRVQEALQIERDQLKEN--TKEIVAKMKESQEKEYQFLKMTAVNETQEKMCEIEHLKEQFETQKLN 1659
Cdd:TIGR00606 991 KHQEKINEDMRLMRQDIDTQKIQERWLQDNltLRKRENELKEVEEELKQHLKEMGQMQVLQMKQEHQKLEENIDLIKRN 1069
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1678-1989 |
2.83e-10 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 66.24 E-value: 2.83e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1678 LEEMRSVTKERDDLRSVEETLKVERDQLKENlRETITR----DLEKQE-ELKIVHMHLKEHQETIDKLRGIVSEKTNEIS 1752
Cdd:TIGR02169 176 LEELEEVEENIERLDLIIDEKRQQLERLRRE-REKAERyqalLKEKREyEGYELLKEKEALERQKEAIERQLASLEEELE 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1753 NMQKDLEHSNDALKAQDLKI-QEELRIAHMHLKEQ---QETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKAN 1828
Cdd:TIGR02169 255 KLTEEISELEKRLEEIEQLLeELNKKIKDLGEEEQlrvKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKL 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1829 EHQLITLKKDVNETQKKVsemEQLKKQIKDQSLTLSKLEIENLNLAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQL 1908
Cdd:TIGR02169 335 LAEIEELEREIEEERKRR---DKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRL 411
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1909 KESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKT--------------IQISDIQKDLDKSKDELQKKDRQ 1974
Cdd:TIGR02169 412 QEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEwkleqlaadlskyeQELYDLKEEYDRVEKELSKLQRE 491
|
330
....*....|....*
gi 767930923 1975 NHQVKPEKRLLSDGQ 1989
Cdd:TIGR02169 492 LAEAEAQARASEERV 506
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1151-1951 |
5.53e-10 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 65.04 E-value: 5.53e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1151 SEMQKKINEIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKERKVLKELQKSFETERDHLRGYIREIeatg 1230
Cdd:TIGR04523 33 TEEKQLEKKLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDLSKI---- 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1231 lqtKEELKIAHIHLKEHQETIDELRRSVSEKTAQIIntqDLEKSHTKLQEEIPVLHEEQELLPNVKEVSETQETMNELEL 1310
Cdd:TIGR04523 109 ---NSEIKNDKEQKNKLEVELNKLEKQKKENKKNID---KFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEK 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1311 LTEQSTTKDsttlarIEMERLRLNEKF---QESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQE 1387
Cdd:TIGR04523 183 LNIQKNIDK------IKNKLLKLELLLsnlKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLN 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1388 QSLNMKEKDNEttkivsemeQFKPKDSALLRIEIEMLGLSKRLQESHDEMKSVAKEKDdlqrlqevlQSESDQLKENIKE 1467
Cdd:TIGR04523 257 QLKDEQNKIKK---------QLSEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQKE---------QDWNKELKSELKN 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1468 IVAKHLETEEELKVAHCCLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQnkiqeiyekeeqfniKQISEVQEKV 1547
Cdd:TIGR04523 319 QEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIE---------------KLKKENQSYK 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1548 NELKQFKehrkakdSALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKmKESQEKE 1627
Cdd:TIGR04523 384 QEIKNLE-------SQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQ-DSVKELI 455
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1628 YQFLKMTavnetqekmceIEHLKEQFETQKLNLENIETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKE 1707
Cdd:TIGR04523 456 IKNLDNT-----------RESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKE 524
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1708 NLRETITRDLEKQEELKIVHMHLKEHQETIDK--LRGIVSEKTNEISnmqkDLEHSNDALKAQDLKIQEELriahmhlKE 1785
Cdd:TIGR04523 525 KIEKLESEKKEKESKISDLEDELNKDDFELKKenLEKEIDEKNKEIE----ELKQTQKSLKKKQEEKQELI-------DQ 593
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1786 QQETIDKLRGIVSEKTDKLSNMQKDLENSNAKlqekiqelkaNEHQLITLKKDVNETQKKVSEMEQLKKQIKDQSLTLSK 1865
Cdd:TIGR04523 594 KEKEKKDLIKEIEEKEKKISSLEKELEKAKKE----------NEKLSSIIKNIKSKKNKLKQEVKQIKETIKEIRNKWPE 663
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1866 LEIENLNLAQKLHENLEEMKSVMKErDNLRRVEETLKLERDQLKESLQEtkaRDLEIQQELKTARMLSKEHKETVDKLRE 1945
Cdd:TIGR04523 664 IIKKIKESKTKIDDIIELMKDWLKE-LSLHYKKYITRMIRIKDLPKLEE---KYKEIEKELKKLDEFSKELENIIKNFNK 739
|
....*.
gi 767930923 1946 KISEKT 1951
Cdd:TIGR04523 740 KFDDAF 745
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
963-1628 |
7.04e-10 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 64.99 E-value: 7.04e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 963 QEQLRNALESLKQHQETINTLKSKISEEVSRNLHMEENTGETKDEFQQKMVGIDKKQDLEAKNTQTLTADVKDNEIIEQQ 1042
Cdd:TIGR00618 166 KELLMNLFPLDQYTQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYL 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1043 RKIFSLIQEKNELQQMLESVIAEKEQLKTDLKEniemtIENQEELRllgdELKKQQEIVAQEKNHAIKKEGELSRTCDRL 1122
Cdd:TIGR00618 246 TQKREAQEEQLKKQQLLKQLRARIEELRAQEAV-----LEETQERI----NRARKAAPLAAHIKAVTQIEQQAQRIHTEL 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1123 AEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQK-----KINEIENLKNELKNKELTLEHMETERL-ELAQKLNENYEEVK 1196
Cdd:TIGR00618 317 QSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTlhsqeIHIRDAHEVATSIREISCQQHTLTQHIhTLQQQKTTLTQKLQ 396
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1197 SITKERKVLKELQKSFETE---RDHLRGYIREIEATGLQTKEELKIAHIHL-KEHQETI------DELRRSVSEKTAQII 1266
Cdd:TIGR00618 397 SLCKELDILQREQATIDTRtsaFRDLQGQLAHAKKQQELQQRYAELCAAAItCTAQCEKlekihlQESAQSLKEREQQLQ 476
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1267 NTQDLEKSHTK----------LQEEIPVLHEEQELLPNVKEV-----------------------SETQETMNELELLTE 1313
Cdd:TIGR00618 477 TKEQIHLQETRkkavvlarllELQEEPCPLCGSCIHPNPARQdidnpgpltrrmqrgeqtyaqleTSEEDVYHQLTSERK 556
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1314 QsTTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQSLNMK 1393
Cdd:TIGR00618 557 Q-RASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHALLRKLQPEQDLQDVRLHLQ 635
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1394 EKDNETTKIVSEMEQF-------KPKDSALLRIEIEMLGLSKR---LQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKE 1463
Cdd:TIGR00618 636 QCSQELALKLTALHALqltltqeRVREHALSIRVLPKELLASRqlaLQKMQSEKEQLTYWKEMLAQCQTLLRELETHIEE 715
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1464 NIKEIVakhlETEEELKVAHCCLKEQEETINELRVNLSE------KETEISTIQKQLEAINDKLQNKIQEIYEKEEQFNI 1537
Cdd:TIGR00618 716 YDREFN----EIENASSSLGSDLAAREDALNQSLKELMHqartvlKARTEAHFNNNEEVTAALQTGAELSHLAAEIQFFN 791
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1538 KQISEVQEKVNELKQfkEHRKAKDSALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIV 1617
Cdd:TIGR00618 792 RLREEDTHLLKTLEA--EIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLGEITHQLLKYEECSKQLAQLTQEQA 869
|
730
....*....|.
gi 767930923 1618 AKMKESQEKEY 1628
Cdd:TIGR00618 870 KIIQLSDKLNG 880
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1424-1627 |
2.00e-09 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 62.09 E-value: 2.00e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1424 LGLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNLSEK 1503
Cdd:COG4942 9 LLLALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAEL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1504 ETEISTIQKQLEAINDKLQNKIQEIYEKEEQ------FNIKQISEVQEKVNELKQFKEHRKAKDSALQSIESKMLELTNR 1577
Cdd:COG4942 89 EKEIAELRAELEAQKEELAELLRALYRLGRQpplallLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAE 168
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 767930923 1578 LQESQEEIQIMIKEKEEMKRVQEALQIERDQ-LKENTKEIVAKMKESQEKE 1627
Cdd:COG4942 169 LEAERAELEALLAELEEERAALEALKAERQKlLARLEKELAELAAELAELQ 219
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
515-1213 |
3.28e-09 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 62.83 E-value: 3.28e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 515 EQLRTEKEEMELKLKEKNDLDEFEALERKTK------KDQEMQLihEISNLKNLVKHAEVYNQDLENELSSKVELLRE-- 586
Cdd:pfam15921 81 EEYSHQVKDLQRRLNESNELHEKQKFYLRQSvidlqtKLQEMQM--ERDAMADIRRRESQSQEDLRNQLQNTVHELEAak 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 587 --KEDQIKKLQEYIDSQKleniKMDLSYslESIEdpKQMKQTLFDAETVALDAKRE-----SAFLRSENLELKEKMKELA 659
Cdd:pfam15921 159 clKEDMLEDSNTQIEQLR----KMMLSH--EGVL--QEIRSILVDFEEASGKKIYEhdsmsTMHFRSLGSAISKILRELD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 660 TTYKQMENDIQLYQSQLEA-KKKMQVDLEKELQSAFNEITKLTSLIDGKVPKDLLCNLELEGKITDLQKELnkEVEENEA 738
Cdd:pfam15921 231 TEISYLKGRIFPVEDQLEAlKSESQNKIELLLQQHQDRIEQLISEHEVEITGLTEKASSARSQANSIQSQL--EIIQEQA 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 739 LREEVILLSELKSLPSEVERLRKEI-------QDKSEELHI-----------ITSEKDKLFSEVVHKESRVQGLLEEIGK 800
Cdd:pfam15921 309 RNQNSMYMRQLSDLESTVSQLRSELreakrmyEDKIEELEKqlvlanselteARTERDQFSQESGNLDDQLQKLLADLHK 388
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 801 TKDDLA-TTQSNYKSTDQEFQNFKTLhmdfeqkykmvleenERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKT 879
Cdd:pfam15921 389 REKELSlEKEQNKRLWDRDTGNSITI---------------DHLRRELDDRNMEVQRLEALLKAMKSECQGQMERQMAAI 453
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 880 REVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSdihdTVNMN 959
Cdd:pfam15921 454 QGKNESLEKVSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKERAIEATNAEITKLRS----RVDLK 529
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 960 IDTQEQLRNALESLKQHQETINTLKSKISE----------EVSRNLHMEENTGETKDEFQQKMVGIDKK---QDLEAKNT 1026
Cdd:pfam15921 530 LQELQHLKNEGDHLRNVQTECEALKLQMAEkdkvieilrqQIENMTQLVGQHGRTAGAMQVEKAQLEKEindRRLELQEF 609
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1027 QTLTaDVKDNEIIEQQRKIFSLIQEK-------NELQQMLESVIAEKEQLKTDLKENIEMTIENQEELRLLGDELKKQQE 1099
Cdd:pfam15921 610 KILK-DKKDAKIRELEARVSDLELEKvklvnagSERLRAVKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSE 688
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1100 IVAQEKNhaiKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKIN----EIENLKNELKNKELTLE 1175
Cdd:pfam15921 689 EMETTTN---KLKMQLKSAQSELEQTRNTLKSMEGSDGHAMKVAMGMQKQITAKRGQIDalqsKIQFLEEAMTNANKEKH 765
|
730 740 750
....*....|....*....|....*....|....*...
gi 767930923 1176 HMETERLELAQKLNENYEEVKSITKERKVLKELQKSFE 1213
Cdd:pfam15921 766 FLKEEKNKLSQELSTVATEKNKMAGELEVLRSQERRLK 803
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
650-1757 |
3.79e-09 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 62.76 E-value: 3.79e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 650 ELKEKMKELATTYKQMENDIQLYQSQLEAKKKMQVDLEKELQSAFNEITKltsLIDGKVPKDLLcNLELEGKITDLQK-- 727
Cdd:TIGR01612 541 EIEAGLKESYELAKNWKKLIHEIKKELEEENEDSIHLEKEIKDLFDKYLE---IDDEIIYINKL-KLELKEKIKNISDkn 616
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 728 -------ELNKEVEENEALREEVILLSELKsLPSEVERLRKEIQD-KSEELHIITSEKDKLFSEVvhkESRVQGLLEEIG 799
Cdd:TIGR01612 617 eyikkaiDLKKIIENNNAYIDELAKISPYQ-VPEHLKNKDKIYSTiKSELSKIYEDDIDALYNEL---SSIVKENAIDNT 692
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 800 KTKDDLATTQSNYKSTDQEFQNFKT----LHM-DFEQKYKMVLEENERMNQEIVN-LSKEAQKFDSSLGALKTELSYKTQ 873
Cdd:TIGR01612 693 EDKAKLDDLKSKIDKEYDKIQNMETatveLHLsNIENKKNELLDIIVEIKKHIHGeINKDLNKILEDFKNKEKELSNKIN 772
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 874 ELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKtliTEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIH 953
Cdd:TIGR01612 773 DYAKEKDELNKYKSKISEIKNHYNDQINIDNIKDEDA---KQNYDKSKEYIKTISIKEDEIFKIINEMKFMKDDFLNKVD 849
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 954 DTVNMNIDTQEQLRNALESLKqhqETINTLKSKISEEVSRNlhMEENTGETKDEFQQKMVGIDKkqdlEAKNTQTLTadv 1033
Cdd:TIGR01612 850 KFINFENNCKEKIDSEHEQFA---ELTNKIKAEISDDKLND--YEKKFNDSKSLINEINKSIEE----EYQNINTLK--- 917
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1034 KDNEIIEQQRKIFSLIQEKNELQQMLESVIaeKEQLKTDLKEN-IEMTIENQEELRLLGDELKKQQEIVAQEKNHAIKKE 1112
Cdd:TIGR01612 918 KVDEYIKICENTKESIEKFHNKQNILKEIL--NKNIDTIKESNlIEKSYKDKFDNTLIDKINELDKAFKDASLNDYEAKN 995
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1113 GELSRTCDRLAEVEEKLKEKSQQLQ--EKQQQLLNVQEEMSEMQKKINEIE--------NLKNELKNK-ELTLEHMETER 1181
Cdd:TIGR01612 996 NELIKYFNDLKANLGKNKENMLYHQfdEKEKATNDIEQKIEDANKNIPNIEiaihtsiyNIIDEIEKEiGKNIELLNKEI 1075
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1182 LELAQKLNENYEEVKSITKE---RKVLKELQKSFETERDHLRGYIREIEATGLQTKEEL----KIAHIHLKEHQETIDEL 1254
Cdd:TIGR01612 1076 LEEAEINITNFNEIKEKLKHynfDDFGKEENIKYADEINKIKDDIKNLDQKIDHHIKALeeikKKSENYIDEIKAQINDL 1155
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1255 RRsVSEKTAQIINTQDLEKSH----TKLQEEIPVLHEEQELLPNVKEVSETQETMNELELLT-EQSTTKDSTTLARIEME 1329
Cdd:TIGR01612 1156 ED-VADKAISNDDPEEIEKKIenivTKIDKKKNIYDEIKKLLNEIAEIEKDKTSLEEVKGINlSYGKNLGKLFLEKIDEE 1234
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1330 R------LRLNEKFQESQEEIKSLTKERDNLKTIK-------EALEVKHDQLKEH-------------IRETLAKIQESQ 1383
Cdd:TIGR01612 1235 KkksehmIKAMEAYIEDLDEIKEKSPEIENEMGIEmdikaemETFNISHDDDKDHhiiskkhdenisdIREKSLKIIEDF 1314
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1384 SKQEQSLNMKEKDN----ETTKIVSEMEQFKPKDSALLRIeiemLGLSKrLQESHDEMKSVAKEKDDLQRLQEVLQSESD 1459
Cdd:TIGR01612 1315 SEESDINDIKKELQknllDAQKHNSDINLYLNEIANIYNI----LKLNK-IKKIIDEVKEYTKEIEENNKNIKDELDKSE 1389
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1460 QLKENIKE-IVAKHLETEEELKVAHCCLKEQEETINELRVNLSEKETEISTIQKQLEAINDKL----------QNKIQEI 1528
Cdd:TIGR01612 1390 KLIKKIKDdINLEECKSKIESTLDDKDIDECIKKIKELKNHILSEESNIDTYFKNADENNENVlllfkniemaDNKSQHI 1469
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1529 YEKEEQ-------FNIKQISEVQEKVNELKQ---------------FKEHRKAKDSALQSIESkmLELTNRLQESQEEIQ 1586
Cdd:TIGR01612 1470 LKIKKDnatndhdFNINELKEHIDKSKGCKDeadknakaieknkelFEQYKKDVTELLNKYSA--LAIKNKFAKTKKDSE 1547
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1587 IMIKEKEEMKRvQEALQIERDQlkentkeivAKMKESQEKEYQFLKMTAVNETQEK-MCEIEHLKEQFETQKLNLENI-- 1663
Cdd:TIGR01612 1548 IIIKEIKDAHK-KFILEAEKSE---------QKIKEIKKEKFRIEDDAAKNDKSNKaAIDIQLSLENFENKFLKISDIkk 1617
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1664 -------ETENIRlTQILHENLEEMRSVTKER-DDLRSVEETLKVERDQlKENLRETITRDLEKQEELKIVHMHLKEHQE 1735
Cdd:TIGR01612 1618 kindclkETESIE-KKISSFSIDSQDTELKENgDNLNSLQEFLESLKDQ-KKNIEDKKKELDELDSEIEKIEIDVDQHKK 1695
|
1210 1220
....*....|....*....|..
gi 767930923 1736 TIDKlrGIVsEKTNEISNMQKD 1757
Cdd:TIGR01612 1696 NYEI--GII-EKIKEIAIANKE 1714
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
1334-2170 |
4.17e-09 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 62.30 E-value: 4.17e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1334 NEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQSLNMKEKDNETTKIVSEMEQFKPKD 1413
Cdd:pfam02463 151 KPERRLEIEEEAAGSRLKRKKKEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLD 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1414 sallrieiEMLGLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETI 1493
Cdd:pfam02463 231 --------YLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSEL 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1494 NELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQFNIKQISEVQEKVNELKQFKEHRKAKdSALQSIESKMLE 1573
Cdd:pfam02463 303 LKLERRKVDDEEKLKESEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLE-QLEEELLAKKKL 381
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1574 LTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKMKESQEKEyqflkmtavnetqEKMCEIEHLKEQF 1653
Cdd:pfam02463 382 ESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEE-------------EESIELKQGKLTE 448
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1654 ETQKLNLENIETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETITRDLEKQEELKIVHMHLKEH 1733
Cdd:pfam02463 449 EKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAH 528
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1734 QETIDKLRGIVSEKTNEISNMQKDLEHSNDALKAQDLKIQEELRIAHMHLKEQQETIDK---LRGIVSEKTDKLSNMQKD 1810
Cdd:pfam02463 529 GRLGDLGVAVENYKVAISTAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLklpLKSIAVLEIDPILNLAQL 608
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1811 LENSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQLKKQIKDQSLTLSKLEIENLNLAQKLHENLEEMKSVMKE 1890
Cdd:pfam02463 609 DKATLEADEDDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESE 688
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1891 RDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEktIQISDIQKDLDKSKDELQK 1970
Cdd:pfam02463 689 LAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDE--EEEEEEKSRLKKEEKEEEK 766
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1971 KDRQNHQVKPEKRLLSDGQQHLTESLREKCSRIKELLKRYSEMDDHYECLNRlSLDLEKEIEFQKELSMRVKANLSLPYL 2050
Cdd:pfam02463 767 SELSLKEKELAEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLE-EEQLLIEQEEKIKEEELEELALELKEE 845
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2051 QTKHIEKLFTANQRCSMEFHRIMKKLKYVLSYVTKIKEEQHESINKFEMDFIDEVEKQKELLIKIQHLQQ-DCDVPSREL 2129
Cdd:pfam02463 846 QKLEKLAEEELERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKeNEIEERIKE 925
|
810 820 830 840
....*....|....*....|....*....|....*....|.
gi 767930923 2130 RDLKLNQNMDLHIEEILKDFSESEFPSIKTEFQQVLSNRKE 2170
Cdd:pfam02463 926 EAEILLKYEEEPEELLLEEADEKEKEENNKEEEEERNKRLL 966
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1170-1799 |
4.32e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 62.26 E-value: 4.32e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1170 KELTLEHMETERLELAQKLNENYEEVKSITKERKVLKELQKSFETERDHLRGYIREIEATGLQTKEELKIAHIHLKEHQE 1249
Cdd:COG1196 216 RELKEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1250 TIDELRRSVSEKTAQIintQDLEKSHTKLQEEIPVLHEEQELLPNVKEVSETQETMNELELLTEQSTtkdsttLARIEME 1329
Cdd:COG1196 296 ELARLEQDIARLEERR---RELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAE------LAEAEEA 366
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1330 RLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQSLnmKEKDNETTKIVSEMEQF 1409
Cdd:COG1196 367 LLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELE--EALAELEEEEEEEEEAL 444
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1410 KPKDSALLRIEIEMLGLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQ 1489
Cdd:COG1196 445 EEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAG 524
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1490 EETInelrvnlseketEISTIQKQLEAINDKLQNKIQEIYEKEEQFNIKQISEVQEKVNELKQFKEHRKAKDSALQSIES 1569
Cdd:COG1196 525 AVAV------------LIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAAL 592
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1570 KMLELTNRLQESQEEIqimIKEKEEMKRVQEALQIERDQLKENTKEIVAKMKESQEKEYQFLKMTAVNETQEKmceiehL 1649
Cdd:COG1196 593 ARGAIGAAVDLVASDL---READARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSL------T 663
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1650 KEQFETQKLNLENIETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETITRDLEKQEELKIVHMH 1729
Cdd:COG1196 664 GGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLE 743
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 767930923 1730 LKEHQETIDKLRGIVSEKTNEISNMQKDLEHSNDALKAQDLKIQEELRIA---HMHLKEQ----QETIDKLRGIVSE 1799
Cdd:COG1196 744 EEELLEEEALEELPEPPDLEELERELERLEREIEALGPVNLLAIEEYEELeerYDFLSEQredlEEARETLEEAIEE 820
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1763-1974 |
5.21e-09 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 60.93 E-value: 5.21e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1763 DALKAQDLKIQEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDVNET 1842
Cdd:COG4942 23 AEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQ 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1843 QKKVSEMEQLKKQIKDQSLTLSKLEIENLNLAQKLHENLEEMKSVMKER-DNLRRVEETLKLERDQLKESLQETKARDLE 1921
Cdd:COG4942 103 KEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQaEELRADLAELAALRAELEAERAELEALLAE 182
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 767930923 1922 IQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKDLDKSKDELQKKDRQ 1974
Cdd:COG4942 183 LEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAE 235
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
873-1387 |
5.41e-09 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 61.98 E-value: 5.41e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 873 QELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDI 952
Cdd:PRK02224 237 DEADEVLEEHEERREELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARR 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 953 HDTVNMNIDTQEQLRNALESLKQHQETINTLKSKISEEVSRNLHMEENTGETKDEFQQKMVGIDKKQDleakntqtlTAD 1032
Cdd:PRK02224 317 EELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRRE---------EIE 387
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1033 VKDNEIIEQQRKIFSLIQEKNELQQMLESVIAEKEQLKTDLKEnIEMTIENQEElrllgdELKKQQEIVAQEKNHAIKKE 1112
Cdd:PRK02224 388 ELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAE-LEATLRTARE------RVEEAEALLEAGKCPECGQP 460
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1113 GELSRTCDRLAEVEEKLKEksqqlqeKQQQLLNVQEEMSEMQKKINEIEnlknELKNKELTLEHMEtERLELAQKLNENY 1192
Cdd:PRK02224 461 VEGSPHVETIEEDRERVEE-------LEAELEDLEEEVEEVEERLERAE----DLVEAEDRIERLE-ERREDLEELIAER 528
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1193 EEvkSITKERKVLKELQKSFEterdhlrgyirEIEATGLQTKEELKIAHIHLKEHQETIDELRRSVSEKTAQIINTQDLE 1272
Cdd:PRK02224 529 RE--TIEEKRERAEELRERAA-----------ELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESLERIR 595
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1273 KSHTKLQEEIPVLHEEQELLPNVKEVS-ETQETMNEL-ELLTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKE 1350
Cdd:PRK02224 596 TLLAAIADAEDEIERLREKREALAELNdERRERLAEKrERKRELEAEFDEARIEEAREDKERAEEYLEQVEEKLDELREE 675
|
490 500 510
....*....|....*....|....*....|....*..
gi 767930923 1351 RDNLKTIKEALEVKHDQLKEhIRETLAKIQESQSKQE 1387
Cdd:PRK02224 676 RDDLQAEIGAVENELEELEE-LRERREALENRVEALE 711
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1717-2018 |
9.56e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 61.11 E-value: 9.56e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1717 LEKQEELKIVH-----MHLKEHQETIDKLRGIVSEKTNEISNMQKDLEHSNDALKAQDLKIQEELRiahmHLKEQQETID 1791
Cdd:COG1196 216 RELKEELKELEaelllLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELEL----ELEEAQAEEY 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1792 KLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDVNETQKkvsEMEQLKKQIKDQSLTLSKLEIENL 1871
Cdd:COG1196 292 ELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEE---ELEEAEEELEEAEAELAEAEEALL 368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1872 NLAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKT 1951
Cdd:COG1196 369 EAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAA 448
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 767930923 1952 IQISDIQKDLDKSKDELQkkdrqnhqvkpEKRLLSDGQQHLTESLREKCSRIKELLKRYSEMDDHYE 2018
Cdd:COG1196 449 EEEAELEEEEEALLELLA-----------ELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYE 504
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
546-895 |
1.09e-08 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 61.24 E-value: 1.09e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 546 KDQEMQLIHEISNLKNLVKHAEVYNQDLENELSskvelLREKEDQIKKLQEYIDSQKLENIKMDLSYSLESIEDPKQMKQ 625
Cdd:TIGR02169 687 KRELSSLQSELRRIENRLDELSQELSDASRKIG-----EIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELK 761
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 626 TLfDAETVALDAKRESAFLRSENLELKEKMKELATTYKQMEnDIQLYQSQLEAKKKmqvDLEKELQSAFNEITKLTSLID 705
Cdd:TIGR02169 762 EL-EARIEELEEDLHKLEEALNDLEARLSHSRIPEIQAELS-KLEEEVSRIEARLR---EIEQKLNRLTLEKEYLEKEIQ 836
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 706 GKVPKdllcNLELEGKITDLQKE---LNKEVEENEALREEviLLSELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFS 782
Cdd:TIGR02169 837 ELQEQ----RIDLKEQIKSIEKEienLNGKKEELEEELEE--LEAALRDLESRLGDLKKERDELEAQLRELERKIEELEA 910
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 783 EVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEFQNfktlHMDFEQKYKMVLEENERMNQ-EIVNLsKEAQKFDSSL 861
Cdd:TIGR02169 911 QIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEE----ELSLEDVQAELQRVEEEIRAlEPVNM-LAIQEYEEVL 985
|
330 340 350
....*....|....*....|....*....|....
gi 767930923 862 GALKtELSYKTQELQEKTREVQERLNEMEQLKEQ 895
Cdd:TIGR02169 986 KRLD-ELKEKRAKLEEERKAILERIEEYEKKKRE 1018
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1474-2042 |
1.30e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 60.72 E-value: 1.30e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1474 ETEEELKVAhcclkeqEEtiNELRVN--LSEKETEISTIQKQLE------AINDKLQNKIQEIYEKEEQFNIKQISEVQE 1545
Cdd:COG1196 176 EAERKLEAT-------EE--NLERLEdiLGELERQLEPLERQAEkaeryrELKEELKELEAELLLLKLRELEAELEELEA 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1546 KVNELKqfkEHRKAKDSALQSIESKMLELTNRLQESQEEIQIMIKE----KEEMKRVQEALQIERDQLKENTKEIVAKMK 1621
Cdd:COG1196 247 ELEELE---AELEELEAELAELEAELEELRLELEELELELEEAQAEeyelLAELARLEQDIARLEERRRELEERLEELEE 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1622 ESQEKEYQFLKMTAVNETQEKmcEIEHLKEQFETQKLNLENIETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVE 1701
Cdd:COG1196 324 ELAELEEELEELEEELEELEE--ELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQ 401
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1702 RDQLKENLRETITRDLEKQEELKIVHMHLKEHQETIDKLRgivsEKTNEISNMQKDLEHSNDALKAQDLKIQEELRIAHM 1781
Cdd:COG1196 402 LEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEE----EALEEAAEEEAELEEEEEALLELLAELLEEAALLEA 477
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1782 HLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLIT-----------------LKKDVNETQK 1844
Cdd:COG1196 478 ALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIgveaayeaaleaalaaaLQNIVVEDDE 557
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1845 KVSEMEQLKKQIKDQSLT-LSKLEIENLNLAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQ 1923
Cdd:COG1196 558 VAAAAIEYLKAAKAGRATfLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALR 637
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1924 QELKTARML--------------SKEHKETVDKLREKISEKTIQISDIQKDLDKSKDELQKKDRQNHQVKPEKRLLSDGQ 1989
Cdd:COG1196 638 RAVTLAGRLrevtlegeggsaggSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERL 717
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|...
gi 767930923 1990 QHLTESLREKCSRIKELLKRYSEMDDHYECLNRLSLDLEKEIEFQKELSMRVK 2042
Cdd:COG1196 718 EEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELE 770
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
695-1204 |
1.61e-08 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 60.44 E-value: 1.61e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 695 NEITKLTSLIDGKVPKDLLCNL-ELEGKITDLQKELnKEVEEN-----EALREEVILLSELKSLPSEVERLRKEIQDKSE 768
Cdd:PRK02224 187 GSLDQLKAQIEEKEEKDLHERLnGLESELAELDEEI-ERYEEQreqarETRDEADEVLEEHEERREELETLEAEIEDLRE 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 769 ELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEFQNFKTLH-------MDFEQKYKMVLEENE 841
Cdd:PRK02224 266 TIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDeelrdrlEECRVAAQAHNEEAE 345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 842 RMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTL 921
Cdd:PRK02224 346 SLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELR 425
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 922 EEVKTLTQekdDLKQLQESLQIERDQLK-------------SDIHDTVNMNIDTQEQLRNALESLKQHQET----INTLK 984
Cdd:PRK02224 426 EREAELEA---TLRTARERVEEAEALLEagkcpecgqpvegSPHVETIEEDRERVEELEAELEDLEEEVEEveerLERAE 502
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 985 S--KISEEVSRNLHMEENTGE-------TKDEFQQKMVGIDK-KQDLEAK-NTQTLTADVKDNEIIEQQRKIFSLIQEKN 1053
Cdd:PRK02224 503 DlvEAEDRIERLEERREDLEEliaerreTIEEKRERAEELRErAAELEAEaEEKREAAAEAEEEAEEAREEVAELNSKLA 582
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1054 ELQQMLESV--IAEKEQLKTDLKENIEMTIENQEELRLLGDE----LKKQQEIVAQ-----EKNHAIKKEGELSRTCDRL 1122
Cdd:PRK02224 583 ELKERIESLerIRTLLAAIADAEDEIERLREKREALAELNDErrerLAEKRERKREleaefDEARIEEAREDKERAEEYL 662
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1123 AEVEEKLKEKsqqlqekQQQLLNVQEEMSEMQKKINEIENLKNELKNKELTLEHMETERLElAQKLNENYEEVKSITKER 1202
Cdd:PRK02224 663 EQVEEKLDEL-------REERDDLQAEIGAVENELEELEELRERREALENRVEALEALYDE-AEELESMYGDLRAELRQR 734
|
..
gi 767930923 1203 KV 1204
Cdd:PRK02224 735 NV 736
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
559-1190 |
2.16e-08 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 59.65 E-value: 2.16e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 559 LKNLVKHAEVYNQDLENELSSKVELLREKEDQIKKLQEY------------------------------IDSQKLENIKM 608
Cdd:TIGR04523 24 YKNIANKQDTEEKQLEKKLKTIKNELKNKEKELKNLDKNlnkdeekinnsnnkikileqqikdlndklkKNKDKINKLNS 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 609 DLSYSLESIEDPKQMKQTLfdaetvaldaKRESAFLRSENLELKEKMKELATTYKQMENDIQLYQSQLEAKKKMQVDLEK 688
Cdd:TIGR04523 104 DLSKINSEIKNDKEQKNKL----------EVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELEN 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 689 ELQSAFNEITKLTSLIDGKVPKDLLCNLELEGKITDLQKELNKEVEENEALREEVILLSELKSLPSEVERLRKEIQDKSE 768
Cdd:TIGR04523 174 ELNLLEKEKLNIQKNIDKIKNKLLKLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQT 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 769 ELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEFQN--FKTLHMDFEQKYKMVLEEN------ 840
Cdd:TIGR04523 254 QLNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQKEQdwNKELKSELKNQEKKLEEIQnqisqn 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 841 ----ERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEK 916
Cdd:TIGR04523 334 nkiiSQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQ 413
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 917 LQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIHD---TVNMNIDTQEQLRNALESLKQHQETINTLKSKISEEVSR 993
Cdd:TIGR04523 414 IKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVkelIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKS 493
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 994 NLHMEENTGETKDEFQQKMVGIDKKQDLEAKNTQTLTADV--KDNEIIEQQRKIFSLIQEKNELQqmLESVIAEKEQLKT 1071
Cdd:TIGR04523 494 KEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKkeKESKISDLEDELNKDDFELKKEN--LEKEIDEKNKEIE 571
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1072 DLKENIEMTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRtcdRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMS 1151
Cdd:TIGR04523 572 ELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEK---ELEKAKKENEKLSSIIKNIKSKKNKLKQEVK 648
|
650 660 670
....*....|....*....|....*....|....*....
gi 767930923 1152 EMQKKINEIENLKNELKNKELTLEHMETERLELAQKLNE 1190
Cdd:TIGR04523 649 QIKETIKEIRNKWPEIIKKIKESKTKIDDIIELMKDWLK 687
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
519-1421 |
2.89e-08 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 59.77 E-value: 2.89e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 519 TEKEEMELKLKEKNDLDEFEALERKTKKDQEMQLIHEISNLKNLVKHAEV--YNQDLENELSSKVELLREKED--QIKKL 594
Cdd:PTZ00121 1090 DEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAEDArkAEEARKAEDAKRVEIARKAEDarKAEEA 1169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 595 QEYIDSQKLEN----IKMDLSYSLESIEDPKQMKQTL-FDAETVALDAKRESAFLRSENLELKEKMKELATTYKQMEndi 669
Cdd:PTZ00121 1170 RKAEDAKKAEAarkaEEVRKAEELRKAEDARKAEAARkAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAE--- 1246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 670 qlyqsqlEAKKKMQVDLEKELQSAFNEITKLTSLIDGKVPKDLLCNLELEGKITDLQK-ELNKEVEENEALREEVILLSE 748
Cdd:PTZ00121 1247 -------EERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKaEEKKKADEAKKKAEEAKKADE 1319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 749 LKSLPSEVERLRKEIQDKSEElhiitsekDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEFQNFKTLHMD 828
Cdd:PTZ00121 1320 AKKKAEEAKKKADAAKKKAEE--------AKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKK 1391
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 829 FEQKYKMVLEENERMNQEIVNLSKEAQKFDSSlgALKTELSYKTQELQEKTREvQERLNEMEQLKEQLENRDSTLQTVER 908
Cdd:PTZ00121 1392 KADEAKKKAEEDKKKADELKKAAAAKKKADEA--KKKAEEKKKADEAKKKAEE-AKKADEAKKKAEEAKKAEEAKKKAEE 1468
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 909 EKTliTEKLQQTLEEVKtltqEKDDLKQLQESLQIERDQLKSDIHDTVNMNIDTQEQLRNALESLKQHQETINTLKSKIS 988
Cdd:PTZ00121 1469 AKK--ADEAKKKAEEAK----KADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKA 1542
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 989 EEVSRNLHMEENTGETKDEFQQKMVgiDKKQDLEAKNTQTLTAD----VKDNEIIEQQRKIFSLIQEKNELQQMLESVIA 1064
Cdd:PTZ00121 1543 EEKKKADELKKAEELKKAEEKKKAE--EAKKAEEDKNMALRKAEeakkAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKI 1620
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1065 EKEQLKT--DLKENIEMTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQ 1142
Cdd:PTZ00121 1621 KAEELKKaeEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEE 1700
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1143 LLNVQEEMSEMQKKINEIENLKNELKNKELTLEHMETERLELAQKLnenyEEVKSITKERKVLKELQKSFETERDHLRGY 1222
Cdd:PTZ00121 1701 AKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKA----EEAKKDEEEKKKIAHLKKEEEKKAEEIRKE 1776
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1223 IREIEATGLQTKeelkiahihlkehqetiDELRRSVSEKTaqiinTQDLEKSHTKLQE----EIPVLHEEQELlpnvkEV 1298
Cdd:PTZ00121 1777 KEAVIEEELDEE-----------------DEKRRMEVDKK-----IKDIFDNFANIIEggkeGNLVINDSKEM-----ED 1829
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1299 SETQETMNELELLTEQSTTkdsttlarIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEalEVKHDQLKEHIRETLAK 1378
Cdd:PTZ00121 1830 SAIKEVADSKNMQLEEADA--------FEKHKFNKNNENGEDGNKEADFNKEKDLKEDDEE--EIEEADEIEKIDKDDIE 1899
|
890 900 910 920
....*....|....*....|....*....|....*....|...
gi 767930923 1379 IQESQSkqeqslNMKEKDNETTKIVSEMEQFKPKDSALLRIEI 1421
Cdd:PTZ00121 1900 REIPNN------NMAGKNNDIIDDKLDKDEYIKRDAEETREEI 1936
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1783-1967 |
4.43e-08 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 57.92 E-value: 4.43e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1783 LKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSE-MEQLKKQIKD--- 1858
Cdd:COG3883 18 IQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEErREELGERARAlyr 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1859 QSLTLSKLE-----------IENLNLAQKLHE-NLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQQEL 1926
Cdd:COG3883 98 SGGSVSYLDvllgsesfsdfLDRLSALSKIADaDADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAELEAQQ 177
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 767930923 1927 KTARMLSKEHKETVDKLREKISEKTIQISDIQKDLDKSKDE 1967
Cdd:COG3883 178 AEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAA 218
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
1426-1970 |
5.33e-08 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 58.76 E-value: 5.33e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1426 LSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVahccLKEQEETINELRVNLSEKET 1505
Cdd:PRK01156 188 LEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALNE----LSSLEDMKNRYESEIKTAES 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1506 EISTIQKQLEAINDkLQNKIQEIYEKEEQFNIKQISEVQEKVNELKQFKEHRKAKDSALQSIESKMLELtnrlqesqEEI 1585
Cdd:PRK01156 264 DLSMELEKNNYYKE-LEERHMKIINDPVYKNRNYINDYFKYKNDIENKKQILSNIDAEINKYHAIIKKL--------SVL 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1586 QIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKMKEsqekeyqflkmtavnetqekmceIEHLKEQFETQKLNLENIET 1665
Cdd:PRK01156 335 QKDYNDYIKKKSRYDDLNNQILELEGYEMDYNSYLKS-----------------------IESLKKKIEEYSKNIERMSA 391
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1666 ENIRLTQILHENLEEMRSVTKE----RDDLRSVEETLKVERDQLKENLREtITRD---LEKQEELKIVHMHLKEhqetiD 1738
Cdd:PRK01156 392 FISEILKIQEIDPDAIKKELNEinvkLQDISSKVSSLNQRIRALRENLDE-LSRNmemLNGQSVCPVCGTTLGE-----E 465
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1739 KLRGIVSEKTNEISNMQKDLEHSNDALKAQDLKIqeelriahmhlKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKL 1818
Cdd:PRK01156 466 KSNHIINHYNEKKSRLEEKIREIEIEVKDIDEKI-----------VDLKKRKEYLESEEINKSINEYNKIESARADLEDI 534
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1819 QEKIQELKANEHQLITLKKDVNETqkKVSEMEQLKKQIKDQSLTLSKLEIENL------------NLAQKLHENLEEMKS 1886
Cdd:PRK01156 535 KIKINELKDKHDKYEEIKNRYKSL--KLEDLDSKRTSWLNALAVISLIDIETNrsrsneikkqlnDLESRLQEIEIGFPD 612
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1887 VMKERDN-LRRVEETLKLERDQLKEsLQETKARDLEIQQELKTARMLSKEHKETVDKLrekiSEKTIQISDIQKDLDKSK 1965
Cdd:PRK01156 613 DKSYIDKsIREIENEANNLNNKYNE-IQENKILIEKLRGKIDNYKKQIAEIDSIIPDL----KEITSRINDIEDNLKKSR 687
|
....*
gi 767930923 1966 DELQK 1970
Cdd:PRK01156 688 KALDD 692
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
577-1074 |
6.21e-08 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 58.55 E-value: 6.21e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 577 LSSKVELLREKEDQIKKLQEYIDSQKLENIK---------MDLSYSLESIEDPKQMKQTLfDAETVALDAKRESAFLRSE 647
Cdd:COG5022 805 LLGSRKEYRSYLACIIKLQKTIKREKKLRETeevefslkaEVLIQKFGRSLKAKKRFSLL-KKETIYLQSAQRVELAERQ 883
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 648 NLELKEKMKELATTYKQMENDIQLYqsqLEAKKKMQVDLEKELQSAFNEITKLTSLIDG---KVPKDL-LCNLELEGKIT 723
Cdd:COG5022 884 LQELKIDVKSISSLKLVNLELESEI---IELKKSLSSDLIENLEFKTELIARLKKLLNNidlEEGPSIeYVKLPELNKLH 960
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 724 DLQKELNKEVEE-NEALREEVILLSELKSLPSEVERLRKEIQDKSEELHIITSEKDKlfsevvhkesrvqglLEEIGKTK 802
Cdd:COG5022 961 EVESKLKETSEEyEDLLKKSTILVREGNKANSELKNFKKELAELSKQYGALQESTKQ---------------LKELPVEV 1025
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 803 DDLATTQSNYKSTDQEFQNFKTLHmdfEQKYKMVLEENE-RMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTRE 881
Cdd:COG5022 1026 AELQSASKIISSESTELSILKPLQ---KLKGLLLLENNQlQARYKALKLRRENSLLDDKQLYQLESTENLLKTINVKDLE 1102
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 882 VQERLNEMEqlkeqlENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQ--LKSDIHDTVNMN 959
Cdd:COG5022 1103 VTNRNLVKP------ANVLQFIVAQMIKLNLLQEISKFLSQLVNTLEPVFQKLSVLQLELDGLFWEanLEALPSPPPFAA 1176
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 960 IDTQEQLRNALESLKQH--QETINTLKSKISEEVSRNLHMEENTGETKDEFQQKMVGIDKKQDLEAKNtqtltaDVKDNE 1037
Cdd:COG5022 1177 LSEKRLYQSALYDEKSKlsSSEVNDLKNELIALFSKIFSGWPRGDKLKKLISEGWVPTEYSTSLKGFN------NLNKKF 1250
|
490 500 510
....*....|....*....|....*....|....*..
gi 767930923 1038 IIEQQRKIFSLIQEKNELQQMLESVIAEKEQLKTDLK 1074
Cdd:COG5022 1251 DTPASMSNEKLLSLLNSIDNLLSSYKLEEEVLPATIN 1287
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
638-1669 |
6.59e-08 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 58.52 E-value: 6.59e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 638 KRESAFLRSENLELKEKMKELATTYKQMENDIQLYQSQLEAKKKMQvDLEKELQSAFNEITKLTSLIDGKVPKD--LLCN 715
Cdd:TIGR00606 158 QEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVQ-EHQMELKYLKQYKEKACEIRDQITSKEaqLESS 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 716 LELEGKITDLQKELNKEVEENEALREEVILLSE----LKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESR- 790
Cdd:TIGR00606 237 REIVKSYENELDPLKNRLKEIEHNLSKIMKLDNeikaLKSRKKQMEKDNSELELKMEKVFQGTDEQLNDLYHNHQRTVRe 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 791 -------VQGLLEEIGKTKDDLATTQSNYKSTDQEFQNFKTLHMDFEQKYKMVLEENErMNQEIVNLSKEA---QKFDSS 860
Cdd:TIGR00606 317 kerelvdCQRELEKLNKERRLLNQEKTELLVEQGRLQLQADRHQEHIRARDSLIQSLA-TRLELDGFERGPfseRQIKNF 395
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 861 LGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQE-----KDDLK 935
Cdd:TIGR00606 396 HTLVIERQEDEAKTAAQLCADLQSKERLKQEQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQlegssDRILE 475
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 936 QLQESLQIERDQLKSDIHDTVnmnidtqEQLRNALESLKQHQETINTLKSKISEEVSRNLHMEENTGETKDEFQQKMVGI 1015
Cdd:TIGR00606 476 LDQELRKAERELSKAEKNSLT-------ETLKKEVKSLQNEKADLDRKLRKLDQEMEQLNHHTTTRTQMEMLTKDKMDKD 548
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1016 DKKQDLEAKNTQTLTADVKDneiieqqrkifslIQEKNELQQMLESVIAEKEQLKtdlkeniemtienqEELRLLGDELK 1095
Cdd:TIGR00606 549 EQIRKIKSRHSDELTSLLGY-------------FPNKKQLEDWLHSKSKEINQTR--------------DRLAKLNKELA 601
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1096 KQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNvQEEMSEMQKKINEIENLKNELKNKELTLE 1175
Cdd:TIGR00606 602 SLEQNKNHINNELESKEEQLSSYEDKLFDVCGSQDEESDLERLKEEIEKS-SKQRAMLAGATAVYSQFITQLTDENQSCC 680
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1176 HMETERLELAQKLNENYEEVKSITK----ERKVLKELQKSFETERDHLRGYIrEIEATGLQTKEElkiahiHLKEHQETI 1251
Cdd:TIGR00606 681 PVCQRVFQTEAELQEFISDLQSKLRlapdKLKSTESELKKKEKRRDEMLGLA-PGRQSIIDLKEK------EIPELRNKL 753
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1252 DELRRSVSEKtaqiinTQDLEKSHTKLQEEIPVLHEEQELLPNVKEVSETQETMNELELLTEQSTTK-DSTTLARIEMEr 1330
Cdd:TIGR00606 754 QKVNRDIQRL------KNDIEEQETLLGTIMPEEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKlQGSDLDRTVQQ- 826
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1331 lrLNEKFQESQEEIKSLTKERDNLKTIKE-------ALEVKHDQLKEHIRETLAKIQESQSKQEQSLnmkEKDNETTKIV 1403
Cdd:TIGR00606 827 --VNQEKQEKQHELDTVVSKIELNRKLIQdqqeqiqHLKSKTNELKSEKLQIGTNLQRRQQFEEQLV---ELSTEVQSLI 901
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1404 SEMEQFKPKDSALLRIeiemlgLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKvah 1483
Cdd:TIGR00606 902 REIKDAKEQDSPLETF------LEKDQQEKEELISSKETSNKKAQDKVNDIKEKVKNIHGYMKDIENKIQDGKDDYL--- 972
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1484 cclKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQ-NKIQEIYEKEEQFNIKQISEVQEKVNELKQF-KEHRKAKD 1561
Cdd:TIGR00606 973 ---KQKETELNTVNAQLEECEKHQEKINEDMRLMRQDIDtQKIQERWLQDNLTLRKRENELKEVEEELKQHlKEMGQMQV 1049
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1562 SALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERD--QLKENTKEIVAKMKESQE------KEYQFLKM 1633
Cdd:TIGR00606 1050 LQMKQEHQKLEENIDLIKRNHVLALGRQKGYEKEIKHFKKELREPQfrDAEEKYREMMIVMRTTELvnkdldIYYKTLDQ 1129
|
1050 1060 1070
....*....|....*....|....*....|....*.
gi 767930923 1634 TAVNETQEKMCEIEHLKEQFETQKLNLENIETENIR 1669
Cdd:TIGR00606 1130 AIMKFHSMKMEEINKIIRDLWRSTYRGQDIEYIEIR 1165
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1159-1769 |
1.11e-07 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 57.62 E-value: 1.11e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1159 EIENLKNELKNKELTLEHMET--ERLELAQKLNENYEEVKSITKERKVLKELQKSF-----ETERDHLRGYIREIEATGL 1231
Cdd:COG4913 226 AADALVEHFDDLERAHEALEDarEQIELLEPIRELAERYAAARERLAELEYLRAALrlwfaQRRLELLEAELEELRAELA 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1232 QTKEELKIAHIHLKEHQETIDELRRSVSEKTAQIINT-----QDLEKSHTKLQE------------EIPVLHEEQELLPN 1294
Cdd:COG4913 306 RLEAELERLEARLDALREELDELEAQIRGNGGDRLEQlereiERLERELEERERrrarleallaalGLPLPASAEEFAAL 385
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1295 VKEVSETQETMNELELLTEQsttkdstTLARIEMERLRLNEKFQESQEEIKSLTKERDNL--------KTIKEALEVKHD 1366
Cdd:COG4913 386 RAEAAALLEALEEELEALEE-------ALAEAEAALRDLRRELRELEAEIASLERRKSNIparllalrDALAEALGLDEA 458
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1367 QLK---EHIretlakiqesqskqeqslNMKEKDNE-------------TTKIVSEmEQFKpkdsALLRIeIEMLGLSKRL 1430
Cdd:COG4913 459 ELPfvgELI------------------EVRPEEERwrgaiervlggfaLTLLVPP-EHYA----AALRW-VNRLHLRGRL 514
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1431 --QESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHL-----ETEEELK----------------VAHCC-- 1485
Cdd:COG4913 515 vyERVRTGLPDPERPRLDPDSLAGKLDFKPHPFRAWLEAELGRRFdyvcvDSPEELRrhpraitragqvkgngTRHEKdd 594
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1486 ---LKEQ-------EETINELRVNLSEKETEISTIQKQLEAINDKLQN--KIQEIYEK--EEQFNIKQISEVQEKVNELK 1551
Cdd:COG4913 595 rrrIRSRyvlgfdnRAKLAALEAELAELEEELAEAEERLEALEAELDAlqERREALQRlaEYSWDEIDVASAEREIAELE 674
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1552 QFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAkmKESQEKEYQFL 1631
Cdd:COG4913 675 AELERLDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAED--LARLELRALLE 752
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1632 KMTAVNETQEKMCEI-EHLKEQFETQKLNLENIETeniRLTQILHENLEEMRSVTKE-RDDLRSVEETLKvERDQLKENl 1709
Cdd:COG4913 753 ERFAAALGDAVERELrENLEERIDALRARLNRAEE---ELERAMRAFNREWPAETADlDADLESLPEYLA-LLDRLEED- 827
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 767930923 1710 retitrDL-EKQEELKivhmHLKeHQETIDKLRGIVSEKTNEISNMQKDLEHSNDALKAQD 1769
Cdd:COG4913 828 ------GLpEYEERFK----ELL-NENSIEFVADLLSKLRRAIREIKERIDPLNDSLKRIP 877
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
1287-1961 |
1.40e-07 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 57.29 E-value: 1.40e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1287 EEQELLPNVKEVSETQETMNELELLTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHD 1366
Cdd:TIGR00618 164 EKKELLMNLFPLDQYTQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHA 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1367 QLKEHIRETLAKIQESQSKQEQSLNMKEKDNETTKIVSEMEQ--FKPKDSALLRIEIEMLGLSKRLQESHDEMKS-VAKE 1443
Cdd:TIGR00618 244 YLTQKREAQEEQLKKQQLLKQLRARIEELRAQEAVLEETQERinRARKAAPLAAHIKAVTQIEQQAQRIHTELQSkMRSR 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1444 KDDLQRLQEVLQSESDQlkENIKEIVAKHLETEEELKVAHcclkEQEETINELRVNLSEKETEISTIQKQLEAINDKLQN 1523
Cdd:TIGR00618 324 AKLLMKRAAHVKQQSSI--EEQRRLLQTLHSQEIHIRDAH----EVATSIREISCQQHTLTQHIHTLQQQKTTLTQKLQS 397
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1524 KIQEI-YEKEEQFNI------------------KQISEVQEKVNELKQFKEHR----KAKDSALQSIESKMLELTNRLQE 1580
Cdd:TIGR00618 398 LCKELdILQREQATIdtrtsafrdlqgqlahakKQQELQQRYAELCAAAITCTaqceKLEKIHLQESAQSLKEREQQLQT 477
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1581 SQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKMKESQEKEYQFLKMTAVNETQEKMCEIEH--------LKEQ 1652
Cdd:TIGR00618 478 KEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDIDNPGPLTRRMQRGEQTYAQLETSEEdvyhqltsERKQ 557
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1653 FETQKLNLENIETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKE-------------NLRETITRDLEK 1719
Cdd:TIGR00618 558 RASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACeqhallrklqpeqDLQDVRLHLQQC 637
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1720 QEELKIVHMHLKEHQETIDKLRgiVSEKTNEISNMQKDLEHSNDAL-------KAQDLKIQEELRIAHMHLKEQQETIDK 1792
Cdd:TIGR00618 638 SQELALKLTALHALQLTLTQER--VREHALSIRVLPKELLASRQLAlqkmqseKEQLTYWKEMLAQCQTLLRELETHIEE 715
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1793 LRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELkanEHQLITLKKDVNETQKKVSEMEQLKKQIKDQsltLSKLEIENLN 1872
Cdd:TIGR00618 716 YDREFNEIENASSSLGSDLAAREDALNQSLKEL---MHQARTVLKARTEAHFNNNEEVTAALQTGAE---LSHLAAEIQF 789
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1873 LAQKLHENLEEMKSVMKE-RDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKiSEKT 1951
Cdd:TIGR00618 790 FNRLREEDTHLLKTLEAEiGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLGEITHQLLKYEECSKQLAQL-TQEQ 868
|
730
....*....|
gi 767930923 1952 IQISDIQKDL 1961
Cdd:TIGR00618 869 AKIIQLSDKL 878
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
1123-2383 |
1.46e-07 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 57.37 E-value: 1.46e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1123 AEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNKELTLE----HMETERLELAQKlnenyeeVKSI 1198
Cdd:TIGR01612 540 KEIEAGLKESYELAKNWKKLIHEIKKELEEENEDSIHLEKEIKDLFDKYLEIDdeiiYINKLKLELKEK-------IKNI 612
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1199 TKERKVLK---ELQKSFETErdhlRGYIREIEatglqtkeelKIAHIHLKEHQETIDELRRSVSEKTAQIINtQDLEKSH 1275
Cdd:TIGR01612 613 SDKNEYIKkaiDLKKIIENN----NAYIDELA----------KISPYQVPEHLKNKDKIYSTIKSELSKIYE-DDIDALY 677
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1276 TKLQ-----------EEIPVLHEEQELLPNVKEVSETQETMNELELLTEQSTTKDSTTLARIEMERL----------RLN 1334
Cdd:TIGR01612 678 NELSsivkenaidntEDKAKLDDLKSKIDKEYDKIQNMETATVELHLSNIENKKNELLDIIVEIKKHihgeinkdlnKIL 757
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1335 EKFQESQEEIKS----LTKERDNLKTIKEAL-EVK---HDQLK-EHIRETLAKIQESQSKqEQSLNMKEKDNETTKIVSE 1405
Cdd:TIGR01612 758 EDFKNKEKELSNkindYAKEKDELNKYKSKIsEIKnhyNDQINiDNIKDEDAKQNYDKSK-EYIKTISIKEDEIFKIINE 836
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1406 MEQFkpKDSALLRIEIEMlglskRLQESHdemksvakekddlqrlQEVLQSESDQLKENIKEIvaKHLETEEELKVAHCC 1485
Cdd:TIGR01612 837 MKFM--KDDFLNKVDKFI-----NFENNC----------------KEKIDSEHEQFAELTNKI--KAEISDDKLNDYEKK 891
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1486 LKEQEETINELRVNLSEKETEISTIQKQLEAIndklqNKIQEIYEKEEQFNIKQiSEVQEKVNE-LKQFKEHRKAKDSAL 1564
Cdd:TIGR01612 892 FNDSKSLINEINKSIEEEYQNINTLKKVDEYI-----KICENTKESIEKFHNKQ-NILKEILNKnIDTIKESNLIEKSYK 965
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1565 QSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEAlqierDQLKENTKEIVAKMKESQEKEyqflKMTAVNETQEKMC 1644
Cdd:TIGR01612 966 DKFDNTLIDKINELDKAFKDASLNDYEAKNNELIKYF-----NDLKANLGKNKENMLYHQFDE----KEKATNDIEQKIE 1036
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1645 EIEHlkeqfetqklNLENIEtenIRLTQILHENLEEMRSVTKERDDLRSVEETLKVER-----DQLKENLRETITRDLEK 1719
Cdd:TIGR01612 1037 DANK----------NIPNIE---IAIHTSIYNIIDEIEKEIGKNIELLNKEILEEAEInitnfNEIKEKLKHYNFDDFGK 1103
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1720 QEELKIvhmhlkehqetidklrgivsekTNEISNMQKDLEHSNDALKAQDLKIQEELRIAHMHLKEQQETIDKLRGiVSE 1799
Cdd:TIGR01612 1104 EENIKY----------------------ADEINKIKDDIKNLDQKIDHHIKALEEIKKKSENYIDEIKAQINDLED-VAD 1160
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1800 KTDKLSNMqKDLENSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQLKKQIKDQSLTLSKLEIENLNLAQKLHE 1879
Cdd:TIGR01612 1161 KAISNDDP-EEIEKKIENIVTKIDKKKNIYDEIKKLLNEIAEIEKDKTSLEEVKGINLSYGKNLGKLFLEKIDEEKKKSE 1239
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1880 N-LEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEiQQELKTARMLSKEHKETVDKLREKiSEKTIQISDIQ 1958
Cdd:TIGR01612 1240 HmIKAMEAYIEDLDEIKEKSPEIENEMGIEMDIKAEMETFNIS-HDDDKDHHIISKKHDENISDIREK-SLKIIEDFSEE 1317
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1959 KDLDKSKDELQKK--DRQNHQvkpekrllSDGQQHLTESLR----EKCSRIKELLKRYSEMDDHYECLNRlslDLEKEIE 2032
Cdd:TIGR01612 1318 SDINDIKKELQKNllDAQKHN--------SDINLYLNEIANiyniLKLNKIKKIIDEVKEYTKEIEENNK---NIKDELD 1386
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2033 FQKELSMRVKANLSLPYLQTKhIEKLFTAN------QRCSMEFHRIMKKLKYVLSYVTKIKEEQHESINKFEMDFIDEVE 2106
Cdd:TIGR01612 1387 KSEKLIKKIKDDINLEECKSK-IESTLDDKdideciKKIKELKNHILSEESNIDTYFKNADENNENVLLLFKNIEMADNK 1465
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2107 KQKELLIKIQHLQQDCDVPSRELRDlklnqnmdlHIEEILKDFSESEFPSIKTEFQQVL--SNRKEMTQFLEEWL----- 2179
Cdd:TIGR01612 1466 SQHILKIKKDNATNDHDFNINELKE---------HIDKSKGCKDEADKNAKAIEKNKELfeQYKKDVTELLNKYSalaik 1536
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2180 ----NTRFDIEKLKNGIQKENDRICQVNNFFNNRIIAIMNESTEFEERSATISKEWEQDLK---SLKEKNEKLFKNYQTL 2252
Cdd:TIGR01612 1537 nkfaKTKKDSEIIIKEIKDAHKKFILEAEKSEQKIKEIKKEKFRIEDDAAKNDKSNKAAIDiqlSLENFENKFLKISDIK 1616
|
1210 1220 1230 1240 1250 1260 1270 1280
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2253 KTSLASGAQVNPTTQDNKNPHVTSRATQLTTEKirELENSLHEAKESAMHKESKIIKMQKELEVTNDIIAKLQAKVHESN 2332
Cdd:TIGR01612 1617 KKINDCLKETESIEKKISSFSIDSQDTELKENG--DNLNSLQEFLESLKDQKKNIEDKKKELDELDSEIEKIEIDVDQHK 1694
|
1290 1300 1310 1320 1330
....*....|....*....|....*....|....*....|....*....|....*.
gi 767930923 2333 K-----CLEKTKETIQVLQDKVALGAKPYKEEIEDLKMKLVKIDLEKMKNAKEFEK 2383
Cdd:TIGR01612 1695 KnyeigIIEKIKEIAIANKEEIESIKELIEPTIENLISSFNTNDLEGIDPNEKLEE 1750
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
494-925 |
1.52e-07 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 57.37 E-value: 1.52e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 494 ENIESELNSLRADYDNLVLDYEQLRTEKEEMELKLKE-KNDLDEFEALERktkkdqemQLIHEISNLKNLVKHAEVYNQD 572
Cdd:TIGR02168 694 AELEKALAELRKELEELEEELEQLRKELEELSRQISAlRKDLARLEAEVE--------QLEERIAQLSKELTELEAEIEE 765
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 573 LENELSSKVELLREKEDQIKKLQEYIDsqklenikmdlsyslesiedpkqmkqtlfdaetvalDAKRESAFLRSENLELK 652
Cdd:TIGR02168 766 LEERLEEAEEELAEAEAEIEELEAQIE------------------------------------QLKEELKALREALDELR 809
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 653 EKMKELATTYKQMENDIQLYQSQLEAKKKMQVDLEKELQsafneitkltslidgkvpkdllcnlELEGKITDLQKELNKE 732
Cdd:TIGR02168 810 AELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIE-------------------------ELSEDIESLAAEIEEL 864
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 733 VEENEALREEVILLSELK-SLPSEVERLRKEIQDKSEELHIItsekdklfsevvhkESRVQGLLEEIGKTKDDLATTQSN 811
Cdd:TIGR02168 865 EELIEELESELEALLNERaSLEEALALLRSELEELSEELREL--------------ESKRSELRRELEELREKLAQLELR 930
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 812 YKSTDQEFQNFKTlhmDFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQ 891
Cdd:TIGR02168 931 LEGLEVRIDNLQE---RLSEEYSLTLEEAEALENKIEDDEEEARRRLKRLENKIKELGPVNLAAIEEYEELKERYDFLTA 1007
|
410 420 430
....*....|....*....|....*....|....*
gi 767930923 892 LKEQL-ENRDSTLQTVEREKTLITEKLQQTLEEVK 925
Cdd:TIGR02168 1008 QKEDLtEAKETLEEAIEEIDREARERFKDTFDQVN 1042
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
844-1381 |
1.66e-07 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 56.95 E-value: 1.66e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 844 NQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEE 923
Cdd:TIGR04523 74 NNKIKILEQQIKDLNDKLKKNKDKINKLNSDLSKINSEIKNDKEQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKE 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 924 VKTLTQEKDDLKQLQESLQIERDQLKSDIHDTVNMNIDTQEQLRN---ALESLKQHQETINTLKSKISEEVSRNLHMEEN 1000
Cdd:TIGR04523 154 LEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKlelLLSNLKKKIQKNKSLESQISELKKQNNQLKDN 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1001 TGETKDEFQQKMVGIDKKQD-----LEAKNTQTLTADVKDNEIIEQQRKIFSLIQEKNELQQMLESVIAEKEQ-LKTDLK 1074
Cdd:TIGR04523 234 IEKKQQEINEKTTEISNTQTqlnqlKDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQKEQdWNKELK 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1075 ENIEmtiENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRT-----------CDRLAEVEEKLKEKSQQLQEKQQQL 1143
Cdd:TIGR04523 314 SELK---NQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSesensekqrelEEKQNEIEKLKKENQSYKQEIKNLE 390
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1144 LNVQEEMSEMQKKINEIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKERKVLKELQKSFETERDHLRGYI 1223
Cdd:TIGR04523 391 SQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQL 470
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1224 REIEATGLQTKEELKIAHIHLKEHQETIDELrrsvsektaqIINTQDLEKSHTKLQEEIPVLHEEQELLPNVKEVSETQE 1303
Cdd:TIGR04523 471 KVLSRSINKIKQNLEQKQKELKSKEKELKKL----------NEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKI 540
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 767930923 1304 TMNELELLTEQSTTKDSttlaRIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQE 1381
Cdd:TIGR04523 541 SDLEDELNKDDFELKKE----NLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISS 614
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
1014-1616 |
1.87e-07 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 56.83 E-value: 1.87e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1014 GIDKKQDLEAKNTQTLTADVKDNEIIEQQ--------------RKIFSLIQEKNELQQ----------MLESVIAEKEQL 1069
Cdd:PRK01156 109 GFDDTTKYIEKNILGISKDVFLNSIFVGQgemdslisgdpaqrKKILDEILEINSLERnydklkdvidMLRAEISNIDYL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1070 KTDLK------ENIEMTIENQEE-LRLLGDELKKQQE---IVAQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEK 1139
Cdd:PRK01156 189 EEKLKssnlelENIKKQIADDEKsHSITLKEIERLSIeynNAMDDYNNLKSALNELSSLEDMKNRYESEIKTAESDLSME 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1140 QQQLLNVQEEMSEMQK-----------KINEIENLKNELKNKELTLEHMETE---------RLELAQKLNENYEEVKS-- 1197
Cdd:PRK01156 269 LEKNNYYKELEERHMKiindpvyknrnYINDYFKYKNDIENKKQILSNIDAEinkyhaiikKLSVLQKDYNDYIKKKSry 348
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1198 --ITKERKVLKE-------LQKSFETERDHLRGYIREIEATGLQTKEELKIAHIHLKEHQETIDELRRSVsektaqiint 1268
Cdd:PRK01156 349 ddLNNQILELEGyemdynsYLKSIESLKKKIEEYSKNIERMSAFISEILKIQEIDPDAIKKELNEINVKL---------- 418
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1269 QDLEKSHTKLQEEIPVLHEEQEllpnvkEVSETQETMNELELL----TEQSTTKDSTTLARIEMERLRLNEKFQESQEEI 1344
Cdd:PRK01156 419 QDISSKVSSLNQRIRALRENLD------ELSRNMEMLNGQSVCpvcgTTLGEEKSNHIINHYNEKKSRLEEKIREIEIEV 492
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1345 KSLTKERDNLKTIKEALEvkhdqlKEHIRETLAKIQESQSKQEQSLNMKEKDNETTKIVSEMEQFKPKDSALlrieieML 1424
Cdd:PRK01156 493 KDIDEKIVDLKKRKEYLE------SEEINKSINEYNKIESARADLEDIKIKINELKDKHDKYEEIKNRYKSL------KL 560
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1425 GLSKRLQESHDEMKSVAKEKDdlqrlQEVLQSESDQLKENIKEIvakhleteeelkvahcclkeqEETINELRVNLSEKE 1504
Cdd:PRK01156 561 EDLDSKRTSWLNALAVISLID-----IETNRSRSNEIKKQLNDL---------------------ESRLQEIEIGFPDDK 614
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1505 TEISTIQKQLEAINDKLQNKIQEIYEKEeqfniKQISEVQEKVNELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEE 1584
Cdd:PRK01156 615 SYIDKSIREIENEANNLNNKYNEIQENK-----ILIEKLRGKIDNYKKQIAEIDSIIPDLKEITSRINDIEDNLKKSRKA 689
|
650 660 670
....*....|....*....|....*....|..
gi 767930923 1585 IQIMIKEKEEMKRVQEALQIERDQLKENTKEI 1616
Cdd:PRK01156 690 LDDAKANRARLESTIEILRTRINELSDRINDI 721
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
1461-1723 |
2.07e-07 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 56.47 E-value: 2.07e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1461 LKENIKEIVAK-HleteeELKVAHCCLKEQEETINELRvNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQFNIKQ 1539
Cdd:PRK05771 14 LKSYKDEVLEAlH-----ELGVVHIEDLKEELSNERLR-KLRSLLTKLSEALDKLRSYLPKLNPLREEKKKVSVKSLEEL 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1540 ISEVQEKVNElkqfkehrkakdsalqsIESKMLELTNRLQESQEEIQIMIKEKEEMKRVqEALQIERDQLK--ENTKEIV 1617
Cdd:PRK05771 88 IKDVEEELEK-----------------IEKEIKELEEEISELENEIKELEQEIERLEPW-GNFDLDLSLLLgfKYVSVFV 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1618 AKMKESQEKEYQ----FLKMTAVNETQEKM-----CEIEHLKEQFET-QKLNLENIETENIR-LTQILHENLEEMRSVTK 1686
Cdd:PRK05771 150 GTVPEDKLEELKlesdVENVEYISTDKGYVyvvvvVLKELSDEVEEElKKLGFERLELEEEGtPSELIREIKEELEEIEK 229
|
250 260 270
....*....|....*....|....*....|....*..
gi 767930923 1687 ERDDLRSVEETLKVERDQLKENLRETITRDLEKQEEL 1723
Cdd:PRK05771 230 ERESLLEELKELAKKYLEELLALYEYLEIELERAEAL 266
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
1297-1959 |
2.15e-07 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 56.77 E-value: 2.15e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1297 EVSETQETMNELELLTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIksltkerdnlktikEALEVKHDQLKEHIRETL 1376
Cdd:pfam12128 277 RQEERQETSAELNQLLRTLDDQWKEKRDELNGELSAADAAVAKDRSEL--------------EALEDQHGAFLDADIETA 342
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1377 AKIQESQSKQEQSLNMKEKDNE--TTKIVSEMEQFKPKDSAL-LRIEIEMLGLSKRLQESHDEM-KSVAKEKDDLQRLQE 1452
Cdd:pfam12128 343 AADQEQLPSWQSELENLEERLKalTGKHQDVTAKYNRRRSKIkEQNNRDIAGIKDKLAKIREARdRQLAVAEDDLQALES 422
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1453 VLQSESDQLKENIKEIVAKHLETEEELKVahccLKEQEETINELRVNLSEKETEISTIQKQLEAINdklqnkiqeiyeke 1532
Cdd:pfam12128 423 ELREQLEAGKLEFNEEEYRLKSRLGELKL----RLNQATATPELLLQLENFDERIERAREEQEAAN-------------- 484
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1533 eqfnikqiSEVQEKVNELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEE--------IQIMIKE----KEEMKRVQE 1600
Cdd:pfam12128 485 --------AEVERLQSELRQARKRRDQASEALRQASRRLEERQSALDELELQlfpqagtlLHFLRKEapdwEQSIGKVIS 556
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1601 ALQIERDQL-----------KENTKEIVAKMKESQEKEYQFL------KMTAVNET-QEKMCEIEHLKEQFETQKLNLEN 1662
Cdd:pfam12128 557 PELLHRTDLdpevwdgsvggELNLYGVKLDLKRIDVPEWAASeeelreRLDKAEEAlQSAREKQAAAEEQLVQANGELEK 636
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1663 IETENIRLTQILHENLEEMRSVTKERDDL-RSVEETLKVERDQLKENLretitRDLEKQEELkivhmHLKEHQETIDKLR 1741
Cdd:pfam12128 637 ASREETFARTALKNARLDLRRLFDEKQSEkDKKNKALAERKDSANERL-----NSLEAQLKQ-----LDKKHQAWLEEQK 706
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1742 GIVSEKTNEISNMQKDLEHSNDA----LKAQDLKIQEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAK 1817
Cdd:pfam12128 707 EQKREARTEKQAYWQVVEGALDAqlalLKAAIAARRSGAKAELKALETWYKRDLASLGVDPDVIAKLKREIRTLERKIER 786
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1818 LQEKIQELKA-----NEHQLI---TLKKDVNETQKKVSEME-QLKKQIKDQSLTLSKLEIE---NLNLAQKLHENLEEMK 1885
Cdd:pfam12128 787 IAVRRQEVLRyfdwyQETWLQrrpRLATQLSNIERAISELQqQLARLIADTKLRRAKLEMErkaSEKQQVRLSENLRGLR 866
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1886 SVM------KERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKTARMLSKEHK-----ETVDKLREK---ISEKT 1951
Cdd:pfam12128 867 CEMsklatlKEDANSEQAQGSIGERLAQLEDLKLKRDYLSESVKKYVEHFKNVIADHSgsglaETWESLREEdhyQNDKG 946
|
....*...
gi 767930923 1952 IQISDIQK 1959
Cdd:pfam12128 947 IRLLDYRK 954
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
1223-1858 |
2.28e-07 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 56.45 E-value: 2.28e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1223 IREIEATGLQTKEELKIAHIHLKEHQETIDELRRSVSEKTAQIINTQDLEKSHTKLQEEIPVLHEEQELLPNvkEVSETQ 1302
Cdd:PRK01156 161 INSLERNYDKLKDVIDMLRAEISNIDYLEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMD--DYNNLK 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1303 ETMNELELLTEqsttkdsttlariemERLRLNEKFQESQEEIKSLTKERDNLKTIKEalevkhdqlkEHIRETLAKIQES 1382
Cdd:PRK01156 239 SALNELSSLED---------------MKNRYESEIKTAESDLSMELEKNNYYKELEE----------RHMKIINDPVYKN 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1383 QSKQEQSLNMKEKDNETTKIVSEMeqfkpkDSALLRIEIEMLGLSKrLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLK 1462
Cdd:PRK01156 294 RNYINDYFKYKNDIENKKQILSNI------DAEINKYHAIIKKLSV-LQKDYNDYIKKKSRYDDLNNQILELEGYEMDYN 366
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1463 ENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNLSEKETEISTIQKQLEAINDK---LQNKIQEIYEKEEQfnIKQ 1539
Cdd:PRK01156 367 SYLKSIESLKKKIEEYSKNIERMSAFISEILKIQEIDPDAIKKELNEINVKLQDISSKvssLNQRIRALRENLDE--LSR 444
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1540 ISEVQEKVNELKQFKEHrkAKDSALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALqiERDQLKENTKEIVAK 1619
Cdd:PRK01156 445 NMEMLNGQSVCPVCGTT--LGEEKSNHIINHYNEKKSRLEEKIREIEIEVKDIDEKIVDLKKR--KEYLESEEINKSINE 520
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1620 MKESQEKEYQFLK-MTAVNETQEKMCEIEHLKEQFETQKlnlenietenirltqilhenLEEMRSVTKERDDLRSVEETL 1698
Cdd:PRK01156 521 YNKIESARADLEDiKIKINELKDKHDKYEEIKNRYKSLK--------------------LEDLDSKRTSWLNALAVISLI 580
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1699 KVERDQLKENLRETITRDLEKQEelkivhmhlkehQETIDKLRGIVSEKTNEISNMQKDLEHSNDALK-AQDLKIQ-EEL 1776
Cdd:PRK01156 581 DIETNRSRSNEIKKQLNDLESRL------------QEIEIGFPDDKSYIDKSIREIENEANNLNNKYNeIQENKILiEKL 648
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1777 RIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSE-------M 1849
Cdd:PRK01156 649 RGKIDNYKKQIAEIDSIIPDLKEITSRINDIEDNLKKSRKALDDAKANRARLESTIEILRTRINELSDRINDinetlesM 728
|
....*....
gi 767930923 1850 EQLKKQIKD 1858
Cdd:PRK01156 729 KKIKKAIGD 737
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
1521-1914 |
2.46e-07 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 56.06 E-value: 2.46e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1521 LQNKIQEIYEKEEQFNIKQISEVQEKVNELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQE 1600
Cdd:pfam07888 32 LQNRLEECLQERAELLQAQEAANRQREKEKERYKRDREQWERQRRELESRVAELKEELRQSREKHEELEEKYKELSASSE 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1601 ALQIERDQLKENTKEIVAKMKESQEKeyqflKMTAVNETQEKMCEIEHLKEQFETQKLNLENIETENIRLTQILHENLEE 1680
Cdd:pfam07888 112 ELSEEKDALLAQRAAHEARIRELEED-----IKTLTQRVLERETELERMKERAKKAGAQRKEEEAERKQLQAKLQQTEEE 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1681 MRSVTKERDDLRSVEEtlkvERDQLKENLRETITRdleKQEELKIVHMHLKEHQETIDKLRGivsekTNEISNMQkdlEH 1760
Cdd:pfam07888 187 LRSLSKEFQELRNSLA----QRDTQVLQLQDTITT---LTQKLTTAHRKEAENEALLEELRS-----LQERLNAS---ER 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1761 SNDALKaqdlkiqEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANehqlitLKKDVN 1840
Cdd:pfam07888 252 KVEGLG-------EELSSMAAQRDRTQAELHQARLQAAQLTLQLADASLALREGRARWAQERETLQQS------AEADKD 318
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 767930923 1841 ETQKKVSEMEQLKKQIKDQSLTLSKLEIEnlnLAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQE 1914
Cdd:pfam07888 319 RIEKLSAELQRLEERLQEERMEREKLEVE---LGREKDCNRVQLSESRRELQELKASLRVAQKEKEQLQAEKQE 389
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
480-973 |
3.16e-07 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 56.20 E-value: 3.16e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 480 SEIEWNPATKLLNQEN-IESELNSLRADYDNLVLDYEQLRTEKEEMELKLKE-KNDLDEFEALERktkkdqemqlihEIS 557
Cdd:PRK02224 194 AQIEEKEEKDLHERLNgLESELAELDEEIERYEEQREQARETRDEADEVLEEhEERREELETLEA------------EIE 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 558 NLKNLVKHAEVYNQDLENELSSKVELLREKEDQIKKLQ-----EYIDSQKLENIKMDLSYSLESIEDPKQMKQTLFDAET 632
Cdd:PRK02224 262 DLRETIAETEREREELAEEVRDLRERLEELEEERDDLLaeaglDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHN 341
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 633 VALDAKRESAF-LRSENLELKEKMKELATTYKQMENDIQLYQSQLEAKKKMQVDLEKELQSAFNEITKLTSLIDgkvpkD 711
Cdd:PRK02224 342 EEAESLREDADdLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLE-----E 416
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 712 LLCNL-ELEGKITDLQ---KELNKEVEENEALREE---------------VILLSE----LKSLPSEVERLRKEIQDKSE 768
Cdd:PRK02224 417 LREERdELREREAELEatlRTARERVEEAEALLEAgkcpecgqpvegsphVETIEEdrerVEELEAELEDLEEEVEEVEE 496
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 769 ELHIITSEKdKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEFQNFKTLHMDFEQKYKMVLEENERMNQEIV 848
Cdd:PRK02224 497 RLERAEDLV-EAEDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVA 575
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 849 NLSKEAQKFDSSLGALKT----------------ELSYKTQELQEKTREVQERLNEMEQLKEQLENR--DSTLQTVEREK 910
Cdd:PRK02224 576 ELNSKLAELKERIESLERirtllaaiadaedeieRLREKREALAELNDERRERLAEKRERKRELEAEfdEARIEEAREDK 655
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 767930923 911 TLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKS--DIHDTVNMNIDTQEQLRNALESL 973
Cdd:PRK02224 656 ERAEEYLEQVEEKLDELREERDDLQAEIGAVENELEELEElrERREALENRVEALEALYDEAEEL 720
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
507-1239 |
3.83e-07 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 56.13 E-value: 3.83e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 507 YDNLVLDYEQLRTEKEEMELKLKEKNDLDEFEALERKTKKDQEMQLIHEISNLKNLVKHAEVYNQDLENELSSKVELLRE 586
Cdd:pfam02463 228 YLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLER 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 587 KEDQIKKLQEyIDSQKLENIKMDLSYSLESIEDPKQMKQTLFDAETVALDAKRESAFLRSENLELKEKMKELATTYKQME 666
Cdd:pfam02463 308 RKVDDEEKLK-ESEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERL 386
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 667 ndiqlyQSQLEAKKKMQVDLEKELQSAFNEITKLTSLIDGKVPKDLLCNLELEGKITDLQKELNKEVEENEALREEVILL 746
Cdd:pfam02463 387 ------SSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKL 460
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 747 SELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEfqnfKTLH 826
Cdd:pfam02463 461 LKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLG----DLGV 536
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 827 MDFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTV 906
Cdd:pfam02463 537 AVENYKVAISTAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEAD 616
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 907 EREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIHDTVNMNIDTQEQLRNALESLKQHQETIN----- 981
Cdd:pfam02463 617 EDDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKeeilr 696
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 982 TLKSKISEEVSRNLHMEENTGETKDEFQQKMVGIDKKQDLEAKNTQTLTADVKDNEIIEQQRKIFSLIQEKNELQQMLES 1061
Cdd:pfam02463 697 RQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKEL 776
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1062 VIAEKEQLKTDLKENIEMTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLKEKS------QQ 1135
Cdd:pfam02463 777 AEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLeklaeeEL 856
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1136 LQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKERKVLKELQKSFETE 1215
Cdd:pfam02463 857 ERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEE 936
|
730 740
....*....|....*....|....
gi 767930923 1216 RDHLRGYIREIEATGLQTKEELKI 1239
Cdd:pfam02463 937 PEELLLEEADEKEKEENNKEEEEE 960
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
1497-2489 |
4.07e-07 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 55.82 E-value: 4.07e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1497 RVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQFNIKQISEVQEKVNELKQFKEHRKAKDSALQSIeskmLELTN 1576
Cdd:TIGR00606 125 KVSLSSKCAEIDREMISHLGVSKAVLNNVIFCHQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVR----QTQGQ 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1577 RLQESQEEIQIMIKEKEEMKRVQEALQIERDQLkENTKEIVAKMKESQEKEYQFLKmtAVNETQEKMCEIEHLKEQFETQ 1656
Cdd:TIGR00606 201 KVQEHQMELKYLKQYKEKACEIRDQITSKEAQL-ESSREIVKSYENELDPLKNRLK--EIEHNLSKIMKLDNEIKALKSR 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1657 KLNLENIETE------------NIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETITRDLEKQEELK 1724
Cdd:TIGR00606 278 KKQMEKDNSElelkmekvfqgtDEQLNDLYHNHQRTVREKERELVDCQRELEKLNKERRLLNQEKTELLVEQGRLQLQAD 357
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1725 IVHMHLKEHQETIDKLrgivsEKTNEISNMQKDLEHSNDALKAQDLKIQEELRIAHMHLKEQQETIDKLR---GIVSEKT 1801
Cdd:TIGR00606 358 RHQEHIRARDSLIQSL-----ATRLELDGFERGPFSERQIKNFHTLVIERQEDEAKTAAQLCADLQSKERlkqEQADEIR 432
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1802 DKLSNMQKDLENSNAKLQEKIQELKANEHQLITLK---KDVNETQKKVSEMEQLKKQIKDQSLTLSK------LEIENLN 1872
Cdd:TIGR00606 433 DEKKGLGRTIELKKEILEKKQEELKFVIKELQQLEgssDRILELDQELRKAERELSKAEKNSLTETLkkevksLQNEKAD 512
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1873 LAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQlKESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTI 1952
Cdd:TIGR00606 513 LDRKLRKLDQEMEQLNHHTTTRTQMEMLTKDKMDK-DEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRD 591
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1953 QISDIQKdldkskdELQKKDRQNHQVKPEKRLLSDGQQHLTESLREKCSRIKELLKrysemddhyecLNRLSLDLEKEie 2032
Cdd:TIGR00606 592 RLAKLNK-------ELASLEQNKNHINNELESKEEQLSSYEDKLFDVCGSQDEESD-----------LERLKEEIEKS-- 651
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2033 fQKELSMRVKANlslpYLQTKHIEKLFTANQRCSMEFHRIMKKLKYVLSYVTKIKEEQHESINKFEM--DFIDEVEKQKE 2110
Cdd:TIGR00606 652 -SKQRAMLAGAT----AVYSQFITQLTDENQSCCPVCQRVFQTEAELQEFISDLQSKLRLAPDKLKSteSELKKKEKRRD 726
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2111 -LLIKIQHLQQDCDVPSRELRDLK-LNQNMDLHIEEILKDFSESEfpsikTEFQQVLSNRKEMTQFLEEWLNTRFDIEKL 2188
Cdd:TIGR00606 727 eMLGLAPGRQSIIDLKEKEIPELRnKLQKVNRDIQRLKNDIEEQE-----TLLGTIMPEEESAKVCLTDVTIMERFQMEL 801
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2189 KNGIQKENDRICQVNNFFNNRIIAIMN-ESTEFEERSATISKEWEQDLKSLKEKNEKLfkNYQTLKTSLASGAQVNPTTQ 2267
Cdd:TIGR00606 802 KDVERKIAQQAAKLQGSDLDRTVQQVNqEKQEKQHELDTVVSKIELNRKLIQDQQEQI--QHLKSKTNELKSEKLQIGTN 879
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2268 DNKNPHVTSRATQLTTEkIRELENSLHEAKESAMHKESKIIKMQKELEVT----NDIIAKLQAKVHESNKCLEKTKETIQ 2343
Cdd:TIGR00606 880 LQRRQQFEEQLVELSTE-VQSLIREIKDAKEQDSPLETFLEKDQQEKEELisskETSNKKAQDKVNDIKEKVKNIHGYMK 958
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2344 VLQDKVALGAKPYKEEIEDLKMKLVKIDLEKMKNAKEFEKEISATKATVEYQKEVIRLLRENLRRSQQAQDTSVISEhtd 2423
Cdd:TIGR00606 959 DIENKIQDGKDDYLKQKETELNTVNAQLEECEKHQEKINEDMRLMRQDIDTQKIQERWLQDNLTLRKRENELKEVEE--- 1035
|
970 980 990 1000 1010 1020
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 767930923 2424 pqpsnkplTCGGGSGIVQNTKALILKSEHIRLEKEISKLKQQNEQLIKQKNELLSNNQHLSNEVKT 2489
Cdd:TIGR00606 1036 --------ELKQHLKEMGQMQVLQMKQEHQKLEENIDLIKRNHVLALGRQKGYEKEIKHFKKELRE 1093
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1366-2032 |
4.16e-07 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 55.84 E-value: 4.16e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1366 DQLKEHIRETLAKIQESQSKQEqsLNMKEKDNETTKIVSEMEQ-FKPKDSALLRIEIEMLGLSKRLQESHDEMKSVAKEK 1444
Cdd:TIGR02169 169 DRKKEKALEELEEVEENIERLD--LIIDEKRQQLERLRREREKaERYQALLKEKREYEGYELLKEKEALERQKEAIERQL 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1445 DDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKvahcclKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNK 1524
Cdd:TIGR02169 247 ASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIK------DLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDA 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1525 IQEIYEKEEQFN-----IKQISEVQEKV--------NELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQIMIKE 1591
Cdd:TIGR02169 321 EERLAKLEAEIDkllaeIEELEREIEEErkrrdkltEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKRE 400
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1592 KEEMKRVQEALQIERDQLKENTKEIVAKMK--ESQEKEYQFLKMTAVNETQEKMCEIEHLKEQFETQKLNLENIETENIR 1669
Cdd:TIGR02169 401 INELKRELDRLQEELQRLSEELADLNAAIAgiEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDR 480
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1670 LTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETI--TRDLEKQEElkivhmhlkEHQETID-----KLRG 1742
Cdd:TIGR02169 481 VEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHgtVAQLGSVGE---------RYATAIEvaagnRLNN 551
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1743 IVSEKT-----------------------NEISNMQKDLEHS---------------------------NDALKAQDLKI 1772
Cdd:TIGR02169 552 VVVEDDavakeaiellkrrkagratflplNKMRDERRDLSILsedgvigfavdlvefdpkyepafkyvfGDTLVVEDIEA 631
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1773 QEELRIAHMHLKEQQETIDKLRGIV--SEKTDKLSNMQKDLENSNAKLQEKIQELKAnehQLITLKKDVNETQKKVSEme 1850
Cdd:TIGR02169 632 ARRLMGKYRMVTLEGELFEKSGAMTggSRAPRGGILFSRSEPAELQRLRERLEGLKR---ELSSLQSELRRIENRLDE-- 706
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1851 qlkkqikdqsltlskleienlnLAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKTAR 1930
Cdd:TIGR02169 707 ----------------------LSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELE 764
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1931 MLSKEHKETVDKLREKI-----SEKTIQISDIQKDLDKSKDELQKKDRQNHQVKPEKRLLSDGQQHLTESLREKCSRIKE 2005
Cdd:TIGR02169 765 ARIEELEEDLHKLEEALndleaRLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRID 844
|
730 740
....*....|....*....|....*..
gi 767930923 2006 LLKRYSEMDDHYECLNRLSLDLEKEIE 2032
Cdd:TIGR02169 845 LKEQIKSIEKEIENLNGKKEELEEELE 871
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
1278-1926 |
5.40e-07 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 55.21 E-value: 5.40e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1278 LQEEIPVLHEEQELLP-NVKEVSETQETMNELELLTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKT 1356
Cdd:pfam10174 58 LKEQYRVTQEENQHLQlTIQALQDELRAQRDLNQLLQQDFTTSPVDGEDKFSTPELTEENFRRLQSEHERQAKELFLLRK 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1357 IKEALEVKHDQLKEHIRETLAKIQE----SQSKQEQSLNMKEKDNETTKIVSEMEQFKPKDSALLRIEIEMLGLSKRLQE 1432
Cdd:pfam10174 138 TLEEMELRIETQKQTLGARDESIKKllemLQSKGLPKKSGEEDWERTRRIAEAEMQLGHLEVLLDQKEKENIHLREELHR 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1433 SHDEMKSVAKEK-------------DDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVN 1499
Cdd:pfam10174 218 RNQLQPDPAKTKalqtviemkdtkiSSLERNIRDLEDEVQMLKTNGLLHTEDREEEIKQMEVYKSHSKFMKNKIDQLKQE 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1500 LSEKETEISTIQKQLEAINDklqnkiqeiyekeEQFNIKQISEVqekvnelkqFKEHRKAKDSALQSIESKMLELTNRLQ 1579
Cdd:pfam10174 298 LSKKESELLALQTKLETLTN-------------QNSDCKQHIEV---------LKESLTAKEQRAAILQTEVDALRLRLE 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1580 ESQeeiQIMIKEKEEMKRVQEAlqierdqlKENTKEIVAKMKESQEkeyqfLKMTAVNETQEKmceIEHLKEQFETQKLN 1659
Cdd:pfam10174 356 EKE---SFLNKKTKQLQDLTEE--------KSTLAGEIRDLKDMLD-----VKERKINVLQKK---IENLQEQLRDKDKQ 416
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1660 LENietenirltqiLHENLEEMRSVTKERDD-LRSVEETLKvERDQLKENLRETITR-DLEKQEELKIVHMHLKEHQETI 1737
Cdd:pfam10174 417 LAG-----------LKERVKSLQTDSSNTDTaLTTLEEALS-EKERIIERLKEQREReDRERLEELESLKKENKDLKEKV 484
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1738 DKLRGIVSEKTNEISnmqkDLEHSNDALKAQDLKIQEELRIAHMHLKEQQETIDKLRG---------IVSEKTDKLSNMQ 1808
Cdd:pfam10174 485 SALQPELTEKESSLI----DLKEHASSLASSGLKKDSKLKSLEIAVEQKKEECSKLENqlkkahnaeEAVRTNPEINDRI 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1809 KDLENSNAKLQEKIQELKANEHQLITLKKDV----NETQKKVSEMEQLK-KQIKDQSLTLSKLeieNLNLAQKLHENLEE 1883
Cdd:pfam10174 561 RLLEQEVARYKEESGKAQAEVERLLGILREVenekNDKDKKIAELESLTlRQMKEQNKKVANI---KHGQQEMKKKGAQL 637
|
650 660 670 680
....*....|....*....|....*....|....*....|....*...
gi 767930923 1884 MKSVMKERDNLRRVEETLKLER-----DQLKESLQETKARDLEIQQEL 1926
Cdd:pfam10174 638 LEEARRREDNLADNSQQLQLEElmgalEKTRQELDATKARLSSTQQSL 685
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1527-2023 |
5.48e-07 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 55.43 E-value: 5.48e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1527 EIYEKEEQFNIKQISEVQEKVNELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIER 1606
Cdd:PRK02224 195 QIEEKEEKDLHERLNGLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERREELETLEAEIEDLRETIAETERER 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1607 DQLKENTKEIVAKMKESQEKEYQFLKMTAVNETQEKmcEIEHLKEQFETQKLNLENiETENIRLTQILHENleEMRSVTK 1686
Cdd:PRK02224 275 EELAEEVRDLRERLEELEEERDDLLAEAGLDDADAE--AVEARREELEDRDEELRD-RLEECRVAAQAHNE--EAESLRE 349
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1687 ERDDLRSVEETLKVERDQLK---ENLRETITRDLEKQEELKI------------------VHMHLKEHQETIDKLRGIVS 1745
Cdd:PRK02224 350 DADDLEERAEELREEAAELEselEEAREAVEDRREEIEELEEeieelrerfgdapvdlgnAEDFLEELREERDELREREA 429
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1746 EKTNEISNMQKDLEHSNDALKA-------QDLKIQEELriahmhlkeqqETIDKLRGIVSEKTDKLSNMQKDLENSNAKL 1818
Cdd:PRK02224 430 ELEATLRTARERVEEAEALLEAgkcpecgQPVEGSPHV-----------ETIEEDRERVEELEAELEDLEEEVEEVEERL 498
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1819 qEKIQELKANEHQLITLKKDVNETQKKVSEMEQlkkQIKDQSLTLSKLEIENLNL----------AQKLHENLEEMKSVM 1888
Cdd:PRK02224 499 -ERAEDLVEAEDRIERLEERREDLEELIAERRE---TIEEKRERAEELRERAAELeaeaeekreaAAEAEEEAEEAREEV 574
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1889 KErdnLRRVEETLKLERDQLkESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKDLDKSKDEL 1968
Cdd:PRK02224 575 AE---LNSKLAELKERIESL-ERIRTLLAAIADAEDEIERLREKREALAELNDERRERLAEKRERKRELEAEFDEARIEE 650
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*
gi 767930923 1969 QKKDRQNhqvkpekrlLSDGQQHLTESLREKCSRIKELLKRYSEMDDHYECLNRL 2023
Cdd:PRK02224 651 AREDKER---------AEEYLEQVEEKLDELREERDDLQAEIGAVENELEELEEL 696
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1294-2167 |
6.46e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 55.53 E-value: 6.46e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1294 NVKEVSETQETMNELELLTEQSTT---KDSTTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKTikEALEVKHDQLKE 1370
Cdd:PTZ00121 1025 NIEKIEELTEYGNNDDVLKEKDIIdedIDGNHEGKAEAKAHVGQDEGLKPSYKDFDFDAKEDNRAD--EATEEAFGKAEE 1102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1371 HIRETLAKIQESQSKQEQSlnMKEKDNETTKIVSEMEQFKPKDSALLRIEIEMLGLSKRLQESHDEMKSV----AKEKDD 1446
Cdd:PTZ00121 1103 AKKTETGKAEEARKAEEAK--KKAEDARKAEEARKAEDARKAEEARKAEDAKRVEIARKAEDARKAEEARkaedAKKAEA 1180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1447 LQRLQEVLQSESDQLKENIKEIVAKHlETEEELKVAHCCLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQ 1526
Cdd:PTZ00121 1181 ARKAEEVRKAEELRKAEDARKAEAAR-KAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEE 1259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1527 EIYEKEEQFNIKQISEVQEKVNELKQFKEHRKAkDSALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIER 1606
Cdd:PTZ00121 1260 ARMAHFARRQAAIKAEEARKADELKKAEEKKKA-DEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKA 1338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1607 DQLKEntKEIVAKMKESQEKEYQflkmtavnETQEKMCEIEHLKEQFETQKLNLENIETENIRLTQILHENLEEMRsvtK 1686
Cdd:PTZ00121 1339 EEAKK--AAEAAKAEAEAAADEA--------EAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDK---K 1405
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1687 ERDDLRSVEETlKVERDQLKENLRETitrdlEKQEELKIVHMHLKEHQETIDKlrgivSEKTNEISNMQKDLEhsnDALK 1766
Cdd:PTZ00121 1406 KADELKKAAAA-KKKADEAKKKAEEK-----KKADEAKKKAEEAKKADEAKKK-----AEEAKKAEEAKKKAE---EAKK 1471
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1767 AQDLKIQEELRIAHMHLKEQQETIDKLrgiVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLitlKKDVNETQKKV 1846
Cdd:PTZ00121 1472 ADEAKKKAEEAKKADEAKKKAEEAKKK---ADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAK---KADEAKKAEEK 1545
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1847 SEMEQLKKQikdqsltlskleiENLNLAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQQEL 1926
Cdd:PTZ00121 1546 KKADELKKA-------------EELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEA 1612
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1927 KTArmlsKEHKETVDKLREKISEKtiqisdiqKDLDKSKDELQKKDRQNHQVKPEKRLLSDGQQHLTESLREKCSRIKEL 2006
Cdd:PTZ00121 1613 KKA----EEAKIKAEELKKAEEEK--------KKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEA 1680
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2007 LKRYSEMDDHYECLNRLSLDLEKEIEFQKELSMRVKanlslpylqtkhieklfTANQRCSMEFHRIMKklkyvlsyVTKI 2086
Cdd:PTZ00121 1681 KKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKK-----------------KAEELKKAEEENKIK--------AEEA 1735
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2087 KEEQHESINKFEMDFIDEVEKQKellikIQHLQQDCDVPSRELRDLKlnqnmDLHIEEILKDFSESEFPSIKTEFQQVLS 2166
Cdd:PTZ00121 1736 KKEAEEDKKKAEEAKKDEEEKKK-----IAHLKKEEEKKAEEIRKEK-----EAVIEEELDEEDEKRRMEVDKKIKDIFD 1805
|
.
gi 767930923 2167 N 2167
Cdd:PTZ00121 1806 N 1806
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
1510-1812 |
6.69e-07 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 55.13 E-value: 6.69e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1510 IQKQLEAINDKLQnkiQEIYEKEEQFNIKQisEVQEKVNEL---KQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQ 1586
Cdd:pfam17380 277 IVQHQKAVSERQQ---QEKFEKMEQERLRQ--EKEEKAREVerrRKLEEAEKARQAEMDRQAAIYAEQERMAMERERELE 351
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1587 IMIKE--KEEMKRV-QEALQIERDQLKEnTKEIVAKMKESQEKEYQFLKMTAVNETQEkmceiEHLKEQFETQKLNLENI 1663
Cdd:pfam17380 352 RIRQEerKRELERIrQEEIAMEISRMRE-LERLQMERQQKNERVRQELEAARKVKILE-----EERQRKIQQQKVEMEQI 425
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1664 ETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVE--RDQLKENLRETITRDLEKQEELKIVHMHLKEHQETIDKLR 1741
Cdd:pfam17380 426 RAEQEEARQREVRRLEEERAREMERVRLEEQERQQQVErlRQQEEERKRKKLELEKEKRDRKRAEEQRRKILEKELEERK 505
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 767930923 1742 GIVSEKTNEISNMQKDLEHSNDAL-KAQDLKIQEELRIAHMHLKEQQETIDKLRgIVSEKTDKLSNMQKDLE 1812
Cdd:pfam17380 506 QAMIEEERKRKLLEKEMEERQKAIyEEERRREAEEERRKQQEMEERRRIQEQMR-KATEERSRLEAMERERE 576
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1508-1998 |
8.09e-07 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 54.77 E-value: 8.09e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1508 STIQKQLEAI-NDKLQNKIQEIY---EKEEQFNIKQISEVQEKVNELKQFKEHRKAKDSALQSIESKMleltNRLQESQE 1583
Cdd:COG4717 37 STLLAFIRAMlLERLEKEADELFkpqGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEEL----EELEAELE 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1584 EIQIMIKEKEEMKRVQEALQiERDQLKENTKEIVAKMKESQEKeyqflkmtaVNETQEKMCEIEHLKEQFETQKLNLENI 1663
Cdd:COG4717 113 ELREELEKLEKLLQLLPLYQ-ELEALEAELAELPERLEELEER---------LEELRELEEELEELEAELAELQEELEEL 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1664 etenirLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLretitRDLEKQEELKIVHMHLKEHQETIDKLRGI 1743
Cdd:COG4717 183 ------LEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEEL-----EELEEELEQLENELEAAALEERLKEARLL 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1744 VSektneISNMQKDLEHSNDALKAQDLKIQEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQ 1823
Cdd:COG4717 252 LL-----IAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLA 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1824 ELKANE----HQLITLKKDVNETQKKVSEMEQLKKQIKDQSLtlsKLEIENLnLAQKLHENLEEMKSVMKERDNLRRVEE 1899
Cdd:COG4717 327 ALGLPPdlspEELLELLDRIEELQELLREAEELEEELQLEEL---EQEIAAL-LAEAGVEDEEELRAALEQAEEYQELKE 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1900 TLKLERDQLKESLQETKAR-----DLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKD--LDKSKDELQKKD 1972
Cdd:COG4717 403 ELEELEEQLEELLGELEELlealdEEELEEELEELEEELEELEEELEELREELAELEAELEQLEEDgeLAELLQELEELK 482
|
490 500
....*....|....*....|....*.
gi 767930923 1973 RQNHQVKPEKRLLSDGQQHLTESLRE 1998
Cdd:COG4717 483 AELRELAEEWAALKLALELLEEAREE 508
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
1690-1911 |
8.39e-07 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 54.25 E-value: 8.39e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1690 DLRSVEETLKVERDQLKENLRETITRDLEK---QEELKIVHMHLKE-----------HQETIDKLR-------GIVSEKT 1748
Cdd:PHA02562 161 DISVLSEMDKLNKDKIRELNQQIQTLDMKIdhiQQQIKTYNKNIEEqrkkngeniarKQNKYDELVeeaktikAEIEELT 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1749 NEISNMQKDLEHSNDALK-----AQDLKIQEEL--RIAHMHLKEQQ-----ETIDKLRGIVSEKTDKLSNMQKDLEnsna 1816
Cdd:PHA02562 241 DELLNLVMDIEDPSAALNklntaAAKIKSKIEQfqKVIKMYEKGGVcptctQQISEGPDRITKIKDKLKELQHSLE---- 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1817 KLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQ----LKKQIKDQSLTLSKLEIENLNLAQKLHENLEEMKSVMKERD 1892
Cdd:PHA02562 317 KLDTAIDELEEIMDEFNEQSKKLLELKNKISTNKQslitLVDKAKKVKAAIEELQAEFVDNAEELAKLQDELDKIVKTKS 396
|
250
....*....|....*....
gi 767930923 1893 NLRRVEETLKLERDQLKES 1911
Cdd:PHA02562 397 ELVKEKYHRGIVTDLLKDS 415
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1288-1534 |
1.07e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 53.61 E-value: 1.07e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1288 EQELLPNVKEVSETQETMNElellTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQ 1367
Cdd:COG4942 26 EAELEQLQQEIAELEKELAA----LKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEA 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1368 LKEHIRETLAKIQESQSKQEQSLnmkekdnettkivsemeQFKPKDSALLRIEIEMLG-LSKRLQEshdEMKSVAKEKDD 1446
Cdd:COG4942 102 QKEELAELLRALYRLGRQPPLAL-----------------LLSPEDFLDAVRRLQYLKyLAPARRE---QAEELRADLAE 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1447 LQRLQEVLQSESDQLKENIKEIVAKHLETEEElkvahccLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQ 1526
Cdd:COG4942 162 LAALRAELEAERAELEALLAELEEERAALEAL-------KAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEA 234
|
....*...
gi 767930923 1527 EIYEKEEQ 1534
Cdd:COG4942 235 EAAAAAER 242
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
747-952 |
1.12e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 53.61 E-value: 1.12e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 747 SELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEFQNFKTLH 826
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 827 MDFEQKYKMVLEENERMNQ----EIVNLSKEAQKFDSSLGALKtelsYKTQELQEKTREVQERLNEMEQLKEQLENRDST 902
Cdd:COG4942 100 EAQKEELAELLRALYRLGRqpplALLLSPEDFLDAVRRLQYLK----YLAPARREQAEELRADLAELAALRAELEAERAE 175
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 767930923 903 LQTVEREKTLITEKLQQTLEE----VKTLTQEKDDLKQLQESLQIERDQLKSDI 952
Cdd:COG4942 176 LEALLAELEEERAALEALKAErqklLARLEKELAELAAELAELQQEAEELEALI 229
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1646-2417 |
1.16e-06 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 54.29 E-value: 1.16e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1646 IEHLKEQFETQKLNLENIETENIRLTQILHE------NLEEMRSVTKE----RDDLRSVEETLKVER-DQLKENLRETit 1714
Cdd:TIGR02168 167 ISKYKERRKETERKLERTRENLDRLEDILNElerqlkSLERQAEKAERykelKAELRELELALLVLRlEELREELEEL-- 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1715 rdlekQEELKIVHMHLKEHQETIDKLRGIVSEKTNEISNMQKDLEHSNDALKAqdlkIQEELRIAHMHLKEQQETIDKLR 1794
Cdd:TIGR02168 245 -----QEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYA----LANEISRLEQQKQILRERLANLE 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1795 givsektDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQLKKQIKDQsltLSKLEIENLNLA 1874
Cdd:TIGR02168 316 -------RQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESR---LEELEEQLETLR 385
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1875 QKLHENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEiqQELKTARMLSKEHKETVDKLREKISEKTIQI 1954
Cdd:TIGR02168 386 SKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEE--AELKELQAELEELEEELEELQEELERLEEAL 463
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1955 SDIQKDLDKSKDELQKKDRQNHQVKPEKRLLSDGQQHLTESLREkcsrIKELLKRYSEMDDHYECLNRLsldlekeIEFQ 2034
Cdd:TIGR02168 464 EELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEG----VKALLKNQSGLSGILGVLSEL-------ISVD 532
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2035 KELSMRVKANL--SLPYLQTKHIEKLFTANQrcSMEFHRIMKKLKYVLS-----YVTKIKEEQHESINKFEMDFIDEVEK 2107
Cdd:TIGR02168 533 EGYEAAIEAALggRLQAVVVENLNAAKKAIA--FLKQNELGRVTFLPLDsikgtEIQGNDREILKNIEGFLGVAKDLVKF 610
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2108 QKELLIKIQHLqqdcdvpsreLRDLKLNQNMDLHIEeILKDFSESEfpSIKTEFQQVLSNRKEMTQFLEEW----LNTRF 2183
Cdd:TIGR02168 611 DPKLRKALSYL----------LGGVLVVDDLDNALE-LAKKLRPGY--RIVTLDGDLVRPGGVITGGSAKTnssiLERRR 677
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2184 DIEKLKNGIQKENDRICQVNNffnnRIIAIMNESTEFEERSATISKEWEQDLKSLKEknekLFKNYQTLKTSLASGAQVN 2263
Cdd:TIGR02168 678 EIEELEEKIEELEEKIAELEK----ALAELRKELEELEEELEQLRKELEELSRQISA----LRKDLARLEAEVEQLEERI 749
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2264 PTTQDNKNPHVTSRATQLttEKIRELENSLHEAKESAMHKESKIIKMQKELEVTNDIIAKLQAKVHESNKCLEKTKETIQ 2343
Cdd:TIGR02168 750 AQLSKELTELEAEIEELE--ERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLE 827
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 767930923 2344 VLQDKVALGAKPY---KEEIEDLKMKLVKIDLEkMKNAKEFEKEISATKATVEYQKEVIRLLRENLRRSQQAQDTSV 2417
Cdd:TIGR02168 828 SLERRIAATERRLedlEEQIEELSEDIESLAAE-IEELEELIEELESELEALLNERASLEEALALLRSELEELSEEL 903
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
1210-1914 |
1.22e-06 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 54.46 E-value: 1.22e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1210 KSFETERDHLRGYIREIEATGLQTKEELKIAHIHLKEH--------QETIDELRRSVSEKTAQIINTQD----LEKSHTK 1277
Cdd:pfam12128 254 ESAELRLSHLHFGYKSDETLIASRQEERQETSAELNQLlrtlddqwKEKRDELNGELSAADAAVAKDRSeleaLEDQHGA 333
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1278 -LQEEIPVLHEEQELLPNVKevSETQETMNELELLTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKT 1356
Cdd:pfam12128 334 fLDADIETAAADQEQLPSWQ--SELENLEERLKALTGKHQDVTAKYNRRRSKIKEQNNRDIAGIKDKLAKIREARDRQLA 411
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1357 IKEA-LEVKHDQLKEHIRETLAKIQESQSKQEQSL-NMKEKDNETTKIVSEMEQFKPKDSallrieiemlglskRLQESH 1434
Cdd:pfam12128 412 VAEDdLQALESELREQLEAGKLEFNEEEYRLKSRLgELKLRLNQATATPELLLQLENFDE--------------RIERAR 477
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1435 DEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINE-LRVNLSEKETEISTIQKQ 1513
Cdd:pfam12128 478 EEQEAANAEVERLQSELRQARKRRDQASEALRQASRRLEERQSALDELELQLFPQAGTLLHfLRKEAPDWEQSIGKVISP 557
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1514 LEAINDKLQNKIQEIYEKEE------QFNIKQIsEVQEKVNELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQi 1587
Cdd:pfam12128 558 ELLHRTDLDPEVWDGSVGGElnlygvKLDLKRI-DVPEWAASEEELRERLDKAEEALQSAREKQAAAEEQLVQANGELE- 635
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1588 miKEKEEMKRVQEALQIERDQLKE--NTKEIVAKMKESQEKEYQFLKMTAVN--ETQEKMCEIEH--LKEQFETQKLNLE 1661
Cdd:pfam12128 636 --KASREETFARTALKNARLDLRRlfDEKQSEKDKKNKALAERKDSANERLNslEAQLKQLDKKHqaWLEEQKEQKREAR 713
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1662 NietenirltqilhENLEEMRSVTKERDD-LRSVEETLKVERDQLKenlRETITRDLEKQEELKivhmHLKEHQETIDKL 1740
Cdd:pfam12128 714 T-------------EKQAYWQVVEGALDAqLALLKAAIAARRSGAK---AELKALETWYKRDLA----SLGVDPDVIAKL 773
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1741 RGIVSEKTNEISNMQKDlehSNDALKAQDLkIQEELRIAHMHLKEQQETIDKLrgiVSEKTDKLSNMQKDLENSNAKLQe 1820
Cdd:pfam12128 774 KREIRTLERKIERIAVR---RQEVLRYFDW-YQETWLQRRPRLATQLSNIERA---ISELQQQLARLIADTKLRRAKLE- 845
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1821 kiQELKANEHQLITLkkdvnetqkkvsemeqlkkqikDQSLTLSKLEIENLNLAqKLHENLEEMKSVMKERdnLRRVEEt 1900
Cdd:pfam12128 846 --MERKASEKQQVRL----------------------SENLRGLRCEMSKLATL-KEDANSEQAQGSIGER--LAQLED- 897
|
730
....*....|....
gi 767930923 1901 LKLERDQLKESLQE 1914
Cdd:pfam12128 898 LKLKRDYLSESVKK 911
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
509-1160 |
1.53e-06 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 53.87 E-value: 1.53e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 509 NLVLDYEQLRTEKEEMELKLKEKNDLDEfealERKTKKDQEMQLIHEISNLKNLVKHAEVYNQDLENELSSKVELLREKE 588
Cdd:TIGR04523 104 DLSKINSEIKNDKEQKNKLEVELNKLEK----QKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLE 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 589 DQIKKLQEYIDSQKLENIKmdLSYSLESIEDPKQMKQTLfdaetvaldaKRESAFLRSENLELKEKMKELATTYKQMEND 668
Cdd:TIGR04523 180 KEKLNIQKNIDKIKNKLLK--LELLLSNLKKKIQKNKSL----------ESQISELKKQNNQLKDNIEKKQQEINEKTTE 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 669 IQLYQSQLEAKKKMQVDLEKELQSAFNEITKLTSLIDGKVPKDLLCNLELEG----KITDLQKELNKEVEENEalREEVI 744
Cdd:TIGR04523 248 ISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDlnnqKEQDWNKELKSELKNQE--KKLEE 325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 745 LLSELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEFQNFKT 824
Cdd:TIGR04523 326 IQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEK 405
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 825 LHMDFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQ 904
Cdd:TIGR04523 406 LNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLE 485
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 905 TVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIHDTVNMNIDTQEQLRNALESLKQHQ--ETINT 982
Cdd:TIGR04523 486 QKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFELKKENleKEIDE 565
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 983 LKSKISEEVSRNLHMEENTGETKDEFQQKMVGIDKKQDLEAKNTQTLTADVKDNEIIEQQRKifSLIQEKNELQQMLESV 1062
Cdd:TIGR04523 566 KNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENE--KLSSIIKNIKSKKNKL 643
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1063 IAEKEQLKTDLKENIEMT---IENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEK 1139
Cdd:TIGR04523 644 KQEVKQIKETIKEIRNKWpeiIKKIKESKTKIDDIIELMKDWLKELSLHYKKYITRMIRIKDLPKLEEKYKEIEKELKKL 723
|
650 660
....*....|....*....|.
gi 767930923 1140 QQQLLNVQEEMSEMQKKINEI 1160
Cdd:TIGR04523 724 DEFSKELENIIKNFNKKFDDA 744
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1105-1666 |
1.96e-06 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 53.49 E-value: 1.96e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1105 KNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNKELT----------- 1173
Cdd:TIGR04523 25 KNIANKQDTEEKQLEKKLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKnkdkinklnsd 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1174 LEHMETERLELAQKLNENYEEVKSITKERKVLKELQKSF-------ETERDHLRGYIREIEATGLQTKEELKIAHIHLKE 1246
Cdd:TIGR04523 105 LSKINSEIKNDKEQKNKLEVELNKLEKQKKENKKNIDKFlteikkkEKELEKLNNKYNDLKKQKEELENELNLLEKEKLN 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1247 HQETIDELRRSVSEKTAQIINTQDLEKSHTKLQEEIPVLHEEQELLPNvkEVSETQETMNELELLTEQSTTKDSTTLARI 1326
Cdd:TIGR04523 185 IQKNIDKIKNKLLKLELLLSNLKKKIQKNKSLESQISELKKQNNQLKD--NIEKKQQEINEKTTEISNTQTQLNQLKDEQ 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1327 EMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQSLNmKEKDNETTKIVSEM 1406
Cdd:TIGR04523 263 NKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQKEQDWNKELKSELKNQEKKLEEIQ-NQISQNNKIISQLN 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1407 EQFKPKDSALLRIEIEMLGLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCL 1486
Cdd:TIGR04523 342 EQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEK 421
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1487 KEQEETINELRV----------NLSEKETEISTIQKQLEAINDKLQNKIQEI---YEKEEQFNIKQISEVQEKVNELKQF 1553
Cdd:TIGR04523 422 ELLEKEIERLKEtiiknnseikDLTNQDSVKELIIKNLDNTRESLETQLKVLsrsINKIKQNLEQKQKELKSKEKELKKL 501
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1554 KEHRKAKDSALQSIESKMLELTNRLQESQEEIQIMIKE----------------KEEMKRVQEALQIERDQLKENTKEIV 1617
Cdd:TIGR04523 502 NEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKisdledelnkddfelkKENLEKEIDEKNKEIEELKQTQKSLK 581
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|.
gi 767930923 1618 AKMKESQE--KEYQFLKMTAVNETQEKMCEIEHLKEQFETQKLNLENIETE 1666
Cdd:TIGR04523 582 KKQEEKQEliDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSI 632
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
654-1627 |
2.60e-06 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 53.26 E-value: 2.60e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 654 KMKELATTYKQMENDIQLYQSQLEAKKKMQVDLEKELQSAFNEITKLTSLIDGKvpkdllcNLELEGKITDLQKELNKEV 733
Cdd:pfam01576 16 KVKERQQKAESELKELEKKHQQLCEEKNALQEQLQAETELCAEAEEMRARLAAR-------KQELEEILHELESRLEEEE 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 734 EENEALReevillselkslpSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYK 813
Cdd:pfam01576 89 ERSQQLQ-------------NEKKKMQQHIQDLEEQLDEEEAARQKLQLEKVTTEAKIKKLEEDILLLEDQNSKLSKERK 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 814 STDQEFQNFKTLHMDFEQKYKMVLE---ENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLnemE 890
Cdd:pfam01576 156 LLEERISEFTSNLAEEEEKAKSLSKlknKHEAMISDLEERLKKEEKGRQELEKAKRKLEGESTDLQEQIAELQAQI---A 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 891 QLKEQLENRDSTLQTVErekTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQ-----------------LKSDIH 953
Cdd:pfam01576 233 ELRAQLAKKEEELQAAL---ARLEEETAQKNNALKKIRELEAQISELQEDLESERAArnkaekqrrdlgeeleaLKTELE 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 954 DTVNMNIDTQE----------QLRNALES-LKQHQETINTLKSKISEEVsrnlhmeENTGETKDEFQQKMVGIDK-KQDL 1021
Cdd:pfam01576 310 DTLDTTAAQQElrskreqevtELKKALEEeTRSHEAQLQEMRQKHTQAL-------EELTEQLEQAKRNKANLEKaKQAL 382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1022 EAKNT------QTLTADVKDNEiiEQQRKIFSLIQE-----------KNELQQMLESVIAEKEQLKTDLKENIEMTIENQ 1084
Cdd:pfam01576 383 ESENAelqaelRTLQQAKQDSE--HKRKKLEGQLQElqarlseserqRAELAEKLSKLQSELESVSSLLNEAEGKNIKLS 460
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1085 EELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKIN------ 1158
Cdd:pfam01576 461 KDVSSLESQLQDTQELLQEETRQKLNLSTRLRQLEDERNSLQEQLEEEEEAKRNVERQLSTLQAQLSDMKKKLEedagtl 540
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1159 ------------EIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKERKVLKELQKSFET------------ 1214
Cdd:pfam01576 541 ealeegkkrlqrELEALTQQLEEKAAAYDKLEKTKNRLQQELDDLLVDLDHQRQLVSNLEKKQKKFDQmlaeekaisary 620
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1215 --ERDHLRGYIREIEATGLQTKEELKIAHIHLKEHQETIDELRRS----VSEKTAQIINTQDLEKSHTKLQEeipvlhee 1288
Cdd:pfam01576 621 aeERDRAEAEAREKETRALSLARALEEALEAKEELERTNKQLRAEmedlVSSKDDVGKNVHELERSKRALEQ-------- 692
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1289 qellpnvkEVSETQETMNELEllTEQSTTKDSTTLARIEMERLRLNEkfqesqeeiksltkERDnLKTIKEALEVKHDQL 1368
Cdd:pfam01576 693 --------QVEEMKTQLEELE--DELQATEDAKLRLEVNMQALKAQF--------------ERD-LQARDEQGEEKRRQL 747
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1369 KEHIRETLAKIQESQSKQEQSLNMKEkdnettKIVSEMEQFKPKDSALLRIEIEMLGLSKRLQEshdEMKSVAKEKDDLQ 1448
Cdd:pfam01576 748 VKQVRELEAELEDERKQRAQAVAAKK------KLELDLKELEAQIDAANKGREEAVKQLKKLQA---QMKDLQRELEEAR 818
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1449 RLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEI 1528
Cdd:pfam01576 819 ASRDEILAQSKESEKKLKNLEAELLQLQEDLAASERARRQAQQERDELADEIASGASGKSALQDEKRRLEARIAQLEEEL 898
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1529 yeKEEQFNIKQISEVQEKV--------NELKQFKEHRKAKDSALQSIESKMLELTNRLQEsqEEIQIMIKEKEEMKRVQE 1600
Cdd:pfam01576 899 --EEEQSNTELLNDRLRKStlqveqltTELAAERSTSQKSESARQQLERQNKELKAKLQE--MEGTVKSKFKSSIAALEA 974
|
1050 1060
....*....|....*....|....*..
gi 767930923 1601 ALQIERDQLKENTKEIVAKMKESQEKE 1627
Cdd:pfam01576 975 KIAQLEEQLEQESRERQAANKLVRRTE 1001
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
1287-1981 |
2.71e-06 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 53.26 E-value: 2.71e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1287 EEQELLPNVKEVSETQETMNELELLTEQSTTKDsttlARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEvkhd 1366
Cdd:pfam01576 3 QEEEMQAKEEELQKVKERQQKAESELKELEKKH----QQLCEEKNALQEQLQAETELCAEAEEMRARLAARKQELE---- 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1367 qlkEHIRETLAKIQESQSKQEQSLNmkEKDNETTKIVSEMEQFKPKDSALLRIEIEMLGLSKRLQESHDEMKSVAKEKDD 1446
Cdd:pfam01576 75 ---EILHELESRLEEEEERSQQLQN--EKKKMQQHIQDLEEQLDEEEAARQKLQLEKVTTEAKIKKLEEDILLLEDQNSK 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1447 LQRlqevlqsESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNLSEKET---EISTIQKQLEAINDKLQN 1523
Cdd:pfam01576 150 LSK-------ERKLLEERISEFTSNLAEEEEKAKSLSKLKNKHEAMISDLEERLKKEEKgrqELEKAKRKLEGESTDLQE 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1524 KIQEIYEKEEQFNIKQISEVQEKVNELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQ 1603
Cdd:pfam01576 223 QIAELQAQIAELRAQLAKKEEELQAALARLEEETAQKNNALKKIRELEAQISELQEDLESERAARNKAEKQRRDLGEELE 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1604 IERDQLkENTKEIVAKMKESQEKEYQflkmtavnetqekmcEIEHLKEQFETQKLNLE-NIETENIRLTQILHENLEEMR 1682
Cdd:pfam01576 303 ALKTEL-EDTLDTTAAQQELRSKREQ---------------EVTELKKALEEETRSHEaQLQEMRQKHTQALEELTEQLE 366
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1683 SVTKERDDLRSVEETLKVERDQLKENLRETITRDLEKQEELKIVHMHLKEHQETIDKLRGIVSEKTNEISNMQKDLEHSN 1762
Cdd:pfam01576 367 QAKRNKANLEKAKQALESENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQARLSESERQRAELAEKLSKLQSELESVS 446
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1763 DALKA---QDLKIQEELRIAHMHLKEQQEtidkLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQE----LKANEHQLITL 1835
Cdd:pfam01576 447 SLLNEaegKNIKLSKDVSSLESQLQDTQE----LLQEETRQKLNLSTRLRQLEDERNSLQEQLEEeeeaKRNVERQLSTL 522
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1836 KKDVNETQKKVSEMEQLKKQIKDQSLTLSKlEIENLNlaQKLHENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQET 1915
Cdd:pfam01576 523 QAQLSDMKKKLEEDAGTLEALEEGKKRLQR-ELEALT--QQLEEKAAAYDKLEKTKNRLQQELDDLLVDLDHQRQLVSNL 599
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 767930923 1916 KARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKDLDKSKDELQKKDRQNHQVKPE 1981
Cdd:pfam01576 600 EKKQKKFDQMLAEEKAISARYAEERDRAEAEAREKETRALSLARALEEALEAKEELERTNKQLRAE 665
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
1359-1942 |
4.84e-06 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 52.21 E-value: 4.84e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1359 EALEVKHDQLKEHIRETLAKIQESQSKQEQslnMKEKDNETTKIVSEMEQFKPKDSALLR----IEIEMLGLSKRLQESH 1434
Cdd:PRK01156 162 NSLERNYDKLKDVIDMLRAEISNIDYLEEK---LKSSNLELENIKKQIADDEKSHSITLKeierLSIEYNNAMDDYNNLK 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1435 DEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINE---LRVNLSEKETEISTIQ 1511
Cdd:PRK01156 239 SALNELSSLEDMKNRYESEIKTAESDLSMELEKNNYYKELEERHMKIINDPVYKNRNYINDyfkYKNDIENKKQILSNID 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1512 KQLEAINDKLQnKIQEIYEKEEQFNIKQiSEVQEKVNELKQFKEHRKAKDSALQSIESKMLELTNRLQESQ-------EE 1584
Cdd:PRK01156 319 AEINKYHAIIK-KLSVLQKDYNDYIKKK-SRYDDLNNQILELEGYEMDYNSYLKSIESLKKKIEEYSKNIErmsafisEI 396
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1585 IQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKMKESQEKEYQFLKMTAVNETQEK--MC-------EIEHLKEQFET 1655
Cdd:PRK01156 397 LKIQEIDPDAIKKELNEINVKLQDISSKVSSLNQRIRALRENLDELSRNMEMLNGQSVcpVCgttlgeeKSNHIINHYNE 476
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1656 QKLNLEnietENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVE-RDQLKENLRETITRDLEKQEELKIVHMHLKEHQ 1734
Cdd:PRK01156 477 KKSRLE----EKIREIEIEVKDIDEKIVDLKKRKEYLESEEINKSInEYNKIESARADLEDIKIKINELKDKHDKYEEIK 552
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1735 ETIDKLrgivsektnEISNMQKDLEHSNDALKAQDLKIQEELRIAHMHLKEQ-QETIDKLRGIVSEKTDKLS---NMQKD 1810
Cdd:PRK01156 553 NRYKSL---------KLEDLDSKRTSWLNALAVISLIDIETNRSRSNEIKKQlNDLESRLQEIEIGFPDDKSyidKSIRE 623
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1811 LENSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQLKKQIKDQSLTLSKLEiENLNLAQKlhenleEMKSVMKE 1890
Cdd:PRK01156 624 IENEANNLNNKYNEIQENKILIEKLRGKIDNYKKQIAEIDSIIPDLKEITSRINDIE-DNLKKSRK------ALDDAKAN 696
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|..
gi 767930923 1891 RDNLRRVEETLKLERDQLKESLQETKaRDLEIQQELKTARMLSKEHKETVDK 1942
Cdd:PRK01156 697 RARLESTIEILRTRINELSDRINDIN-ETLESMKKIKKAIGDLKRLREAFDK 747
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1435-1629 |
5.03e-06 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 51.37 E-value: 5.03e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1435 DEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEElkvahccLKEQEETINELrvnlsekETEISTIQKQL 1514
Cdd:COG3883 16 PQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAE-------LEALQAEIDKL-------QAEIAEAEAEI 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1515 EAINDKLQNKIQEIYEKEEQFN--------------------IKQISE-VQEKVNELKQFKEHRKAKDSALQSIESKMLE 1573
Cdd:COG3883 82 EERREELGERARALYRSGGSVSyldvllgsesfsdfldrlsaLSKIADaDADLLEELKADKAELEAKKAELEAKLAELEA 161
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 767930923 1574 LTNRLQESQEEIQimiKEKEEMKRVQEALQIERDQLKENTKEIVAKMKESQEKEYQ 1629
Cdd:COG3883 162 LKAELEAAKAELE---AQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAA 214
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1003-1603 |
5.17e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 52.22 E-value: 5.17e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1003 ETKDEFQQKM---VGIDKKQDLE-------AKNTQTLTADVKDN-----EIIEQQRKIFSLIQEKNELQQMLESVIAEKE 1067
Cdd:COG4913 173 DSFSAYLARLrrrLGIGSEKALRllhktqsFKPIGDLDDFVREYmleepDTFEAADALVEHFDDLERAHEALEDAREQIE 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1068 QLkTDLKENIEMTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRtcDRLAEVEEKLKEKSQQLQEKQQQLLNVQ 1147
Cdd:COG4913 253 LL-EPIRELAERYAAARERLAELEYLRAALRLWFAQRRLELLEAELEELR--AELARLEAELERLEARLDALREELDELE 329
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1148 EEMSemQKKINEIENLKNELKNKELTLEHMETERLELAQKLN----ENYEEVKSITKERKVLKELQKSFETERDHLRGYI 1223
Cdd:COG4913 330 AQIR--GNGGDRLEQLEREIERLERELEERERRRARLEALLAalglPLPASAEEFAALRAEAAALLEALEEELEALEEAL 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1224 REIEATGLQTKEElkiahihLKEHQETIDELRRSVSEKTAQIINTQDLEKSHTKL-QEEIPVLHEEQELLPN-------- 1294
Cdd:COG4913 408 AEAEAALRDLRRE-------LRELEAEIASLERRKSNIPARLLALRDALAEALGLdEAELPFVGELIEVRPEeerwrgai 480
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1295 --------------------------------------VKEVSETQETMNELE-LLTEQSTTKDSTTLARIEMErlrLNE 1335
Cdd:COG4913 481 ervlggfaltllvppehyaaalrwvnrlhlrgrlvyerVRTGLPDPERPRLDPdSLAGKLDFKPHPFRAWLEAE---LGR 557
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1336 KFQ----ESQEEI----KSLTKE-------------------------RDNLKTIkEALEVKHDQLKEHIRETLAKIQES 1382
Cdd:COG4913 558 RFDyvcvDSPEELrrhpRAITRAgqvkgngtrhekddrrrirsryvlgFDNRAKL-AALEAELAELEEELAEAEERLEAL 636
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1383 QSKQEQslnMKEKDNETTKIvsEMEQFKPKDSALLRIEIEMLGLSK-RLQESHDEMKSVAKEKDDLQRLQEVLQSESDQL 1461
Cdd:COG4913 637 EAELDA---LQERREALQRL--AEYSWDEIDVASAEREIAELEAELeRLDASSDDLAALEEQLEELEAELEELEEELDEL 711
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1462 KENIKEIVAKHLETEEELKVAHCCLKEQEETINEL----------RVNLSEKETEIS-TIQKQLEAINDKLQNKIQEIYE 1530
Cdd:COG4913 712 KGEIGRLEKELEQAEEELDELQDRLEAAEDLARLElralleerfaAALGDAVERELReNLEERIDALRARLNRAEEELER 791
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1531 KEEQFNIKQISEVQE------------------KVNELKQFKEhrKAKDSALQSIESKMLELTNRLQESQEEIqimikeK 1592
Cdd:COG4913 792 AMRAFNREWPAETADldadleslpeylalldrlEEDGLPEYEE--RFKELLNENSIEFVADLLSKLRRAIREI------K 863
|
730
....*....|.
gi 767930923 1593 EEMKRVQEALQ 1603
Cdd:COG4913 864 ERIDPLNDSLK 874
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1329-1549 |
6.05e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 51.30 E-value: 6.05e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1329 ERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSK-QEQSLNMKEKDNETTKIVSEME 1407
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQElAALEAELAELEKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1408 QFKPKDSALLRiEIEMLGLSKRLQE--SHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCC 1485
Cdd:COG4942 101 AQKEELAELLR-ALYRLGRQPPLALllSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEAL 179
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 767930923 1486 LKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEiyEKEEQFNIKQISEVQEKVNE 1549
Cdd:COG4942 180 LAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQE--AEELEALIARLEAEAAAAAE 241
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
1762-1962 |
6.24e-06 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 51.55 E-value: 6.24e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1762 NDALKAQDLK---IQEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQEL-KANEHQLITLKK 1837
Cdd:PHA02562 180 NQQIQTLDMKidhIQQQIKTYNKNIEEQRKKNGENIARKQNKYDELVEEAKTIKAEIEELTDELLNLvMDIEDPSAALNK 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1838 DVNETQKKVSEMEQLKK----------------QIKDQSLTLSKLEIENLNLAQKLH---ENLEEMKSVMKERDNLRRVE 1898
Cdd:PHA02562 260 LNTAAAKIKSKIEQFQKvikmyekggvcptctqQISEGPDRITKIKDKLKELQHSLEkldTAIDELEEIMDEFNEQSKKL 339
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 767930923 1899 ETLKLERDQLKESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKDLD 1962
Cdd:PHA02562 340 LELKNKISTNKQSLITLVDKAKKVKAAIEELQAEFVDNAEELAKLQDELDKIVKTKSELVKEKY 403
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
1016-1527 |
6.54e-06 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 51.84 E-value: 6.54e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1016 DKKQDLEAKNTQTL-TADVKdneiieqqrkifSLIQEKNELQQMLES---VIAEKEQLKTDLKENIEMTIENQEELrllg 1091
Cdd:PRK11281 40 DVQAQLDALNKQKLlEAEDK------------LVQQDLEQTLALLDKidrQKEETEQLKQQLAQAPAKLRQAQAEL---- 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1092 DELKKQQEIVAQE--KNHAIKK-EGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELK 1168
Cdd:PRK11281 104 EALKDDNDEETREtlSTLSLRQlESRLAQTLDQLQNAQNDLAEYNSQLVSLQTQPERAQAALYANSQRLQQIRNLLKGGK 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1169 NKELTLEHMETERLELAQKLNEnyeevKSITKERKVLK---ELQKSFETERDHLRGYIREIEAtglqtkeelkiahiHLK 1245
Cdd:PRK11281 184 VGGKALRPSQRVLLQAEQALLN-----AQNDLQRKSLEgntQLQDLLQKQRDYLTARIQRLEH--------------QLQ 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1246 EHQETIDELRRSVSEKTA-QIINTQDLEKSHTKlqeeiPVLHEEQELlpNVKeVSEtqetmnelELLteQSTTkdsttla 1324
Cdd:PRK11281 245 LLQEAINSKRLTLSEKTVqEAQSQDEAARIQAN-----PLVAQELEI--NLQ-LSQ--------RLL--KATE------- 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1325 riemerlRLNEKFQESQEeikslTKER-DNL----KTIKEALEVKHDQLkehireTLAKIqesQSKQEQSLnmkekdnET 1399
Cdd:PRK11281 300 -------KLNTLTQQNLR-----VKNWlDRLtqseRNIKEQISVLKGSL------LLSRI---LYQQQQAL-------PS 351
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1400 TKIVSEMeqfkPKDSALLRIEIemlglsKRLQESHDEMKSVAKEKDDLQRLQEvlQSESDQLKENIKEIvakhLETEEEL 1479
Cdd:PRK11281 352 ADLIEGL----ADRIADLRLEQ------FEINQQRDALFQPDAYIDKLEAGHK--SEVTDEVRDALLQL----LDERREL 415
|
490 500 510 520
....*....|....*....|....*....|....*....|....*....
gi 767930923 1480 kvahcclkeQEETINELRVNLSEKET-EIStiQKQLEAINDKLQNKIQE 1527
Cdd:PRK11281 416 ---------LDQLNKQLNNQLNLAINlQLN--QQQLLSVSDSLQSTLTQ 453
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1730-2476 |
6.72e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 51.99 E-value: 6.72e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1730 LKEHQETIDKLRGIVSEKTNEISNMQKDLEHsndALKAQDLKIQEELRIAHMHLKEQQETIDKLRGIVSEktdkLSNMQK 1809
Cdd:TIGR02169 179 LEEVEENIERLDLIIDEKRQQLERLRREREK---AERYQALLKEKREYEGYELLKEKEALERQKEAIERQ----LASLEE 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1810 DLEnsnaKLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQLKKQIKDQSLT---------LSKLEIENLNLAQKLHEN 1880
Cdd:TIGR02169 252 ELE----KLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKEKIGELEaeiaslersIAEKERELEDAEERLAKL 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1881 LEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKD 1960
Cdd:TIGR02169 328 EAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRE 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1961 LDKSKDELQKKDRQNHQVKPEKRLLSDGQQHLTESLREKCSRIKELLKRYSEMDDHYECLNRLSLDLEKEIE-FQKELSm 2039
Cdd:TIGR02169 408 LDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDrVEKELS- 486
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2040 RVKANLSLPYLQTKHIEKLFTANQRCSMEFHRIMKKLKYVLSYVTKIKEEQH---ESINKFEMDFI----DEVEKQKELL 2112
Cdd:TIGR02169 487 KLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQLGSVGERYAtaiEVAAGNRLNNVvvedDAVAKEAIEL 566
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2113 IKIQHLQQDCDVPSRELRD-------LKLNQNMDLHIEeiLKDFSESEFPSIKTEFQQVL------SNRKEMTQF----- 2174
Cdd:TIGR02169 567 LKRRKAGRATFLPLNKMRDerrdlsiLSEDGVIGFAVD--LVEFDPKYEPAFKYVFGDTLvvedieAARRLMGKYrmvtl 644
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2175 ----------------------------LEEWLNTRFDIEKLK---NGIQKENDRIcqvnnffNNRIIAIMNESTEFEER 2223
Cdd:TIGR02169 645 egelfeksgamtggsraprggilfsrsePAELQRLRERLEGLKrelSSLQSELRRI-------ENRLDELSQELSDASRK 717
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2224 SATISKEWEQdlksLKEKNEKLFKNYQTLKTSLASgAQVNPTTQDNKNPHVTSRATQLTtEKIRELENSLHEAKesAMHK 2303
Cdd:TIGR02169 718 IGEIEKEIEQ----LEQEEEKLKERLEELEEDLSS-LEQEIENVKSELKELEARIEELE-EDLHKLEEALNDLE--ARLS 789
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2304 ESKIIKMQKELEVTNDIIAKLQAKVHESNKCLEKTKETIQVLQDkvalgakpykeEIEDLKMKLVKIDLEKmknaKEFEK 2383
Cdd:TIGR02169 790 HSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEK-----------EIQELQEQRIDLKEQI----KSIEK 854
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2384 EISATKATVEYQKEVIRLLRENLRRsqqaqdtsvisehtdpqpsnkpltcgggsgivqntkaliLKSEHIRLEKEISKLK 2463
Cdd:TIGR02169 855 EIENLNGKKEELEEELEELEAALRD---------------------------------------LESRLGDLKKERDELE 895
|
810
....*....|...
gi 767930923 2464 QQNEQLIKQKNEL 2476
Cdd:TIGR02169 896 AQLRELERKIEEL 908
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1777-2133 |
6.72e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 51.99 E-value: 6.72e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1777 RIAHMHLKEQQETIDKLRGIvsektdklsnmqKDLENSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSEmEQLKKqI 1856
Cdd:TIGR02169 146 DFISMSPVERRKIIDEIAGV------------AEFDRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRR-EREKA-E 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1857 KDQSLTLSKLEIENLNLAQKLHENLEEMKSVMKERDNLRRveetlklERDQLKESLQETKARDLEIQQELKT-ARMLSKE 1935
Cdd:TIGR02169 212 RYQALLKEKREYEGYELLKEKEALERQKEAIERQLASLEE-------ELEKLTEEISELEKRLEEIEQLLEElNKKIKDL 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1936 HKETVDKLREKISEKTIQISDIQKDLDKSKDELQKKDRQNHQVKPEKRLLSDGQQHLTESLREKCSRIKELLKRYSEMDD 2015
Cdd:TIGR02169 285 GEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKE 364
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2016 HYECLNRLSLDLEKEIEFQKELSMRVKANLSlpylQTKH-IEKLFTANQRCSMEFHRIMKKLKYVLSYVTKIKEEQHESI 2094
Cdd:TIGR02169 365 ELEDLRAELEEVDKEFAETRDELKDYREKLE----KLKReINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELE 440
|
330 340 350
....*....|....*....|....*....|....*....
gi 767930923 2095 NKFEmDFIDEVEKQKElliKIQHLQQDCDVPSRELRDLK 2133
Cdd:TIGR02169 441 EEKE-DKALEIKKQEW---KLEQLAADLSKYEQELYDLK 475
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1342-1794 |
8.83e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 51.31 E-value: 8.83e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1342 EEIKSLTKERDNLKTIKEALEVKHDQLKEhIRETLAKIQESQSKQEQSLNMKEKdnettkivseMEQFKPKDSALLRIEI 1421
Cdd:COG4717 71 KELKELEEELKEAEEKEEEYAELQEELEE-LEEELEELEAELEELREELEKLEK----------LLQLLPLYQELEALEA 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1422 EMLGLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAhccLKEQEETINELRVNLS 1501
Cdd:COG4717 140 ELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEE---LEELQQRLAELEEELE 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1502 EKETEISTIQKQLEAINDKLQNKIQEIYEKEEQFNIKQISEVQEKVNELKQFKEHRKAKDSALQSIESKMLELTNRLQES 1581
Cdd:COG4717 217 EAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLARE 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1582 QEEIQIMIKEKEEMKRVQEALQIERDQLKENTKeivakMKESQEKEYQFLKMTAVNETQEKMCEIEHLKEQfetqkLNLE 1661
Cdd:COG4717 297 KASLGKEAEELQALPALEELEEEELEELLAALG-----LPPDLSPEELLELLDRIEELQELLREAEELEEE-----LQLE 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1662 NIETENIRLTQILH-ENLEEMRSVTKERDDLRSVEETLKVERDQLkENLRETITRDLEK------QEELKIVHMHLKEHQ 1734
Cdd:COG4717 367 ELEQEIAALLAEAGvEDEEELRAALEQAEEYQELKEELEELEEQL-EELLGELEELLEAldeeelEEELEELEEELEELE 445
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 767930923 1735 ETIDKLRGIVSEKTNEISNMQKDLEHSNDALKAQDLKIQ-EELRIAHMHLKEQQETIDKLR 1794
Cdd:COG4717 446 EELEELREELAELEAELEQLEEDGELAELLQELEELKAElRELAEEWAALKLALELLEEAR 506
|
|
| PTZ00440 |
PTZ00440 |
reticulocyte binding protein 2-like protein; Provisional |
450-1561 |
9.07e-06 |
|
reticulocyte binding protein 2-like protein; Provisional
Pssm-ID: 240419 [Multi-domain] Cd Length: 2722 Bit Score: 51.76 E-value: 9.07e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 450 THKLSINLLREIDESVCSESDVFSNTLDTLSEIEWNPATKLLNQENIESELNSLRADYDNLVLDYEQLRTEKEEMELKLK 529
Cdd:PTZ00440 355 SFKFSLEMLSMLDSLLIKKEKILNNLFNKLFGDLKEKIETLLDSEYFISKYTNIISLSEHTLKAAEDVLKENSQKIADYA 434
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 530 EKNDLdefEALERKTKKDQEM----QLIHEISNLKNLVKHAEVYNQDLENELSSKVELLREKEDQIKKLQEYIdsQKLEN 605
Cdd:PTZ00440 435 LYSNL---EIIEIKKKYDEKInelkKSINQLKTLISIMKSFYDLIISEKDSMDSKEKKESSDSNYQEKVDELL--QIINS 509
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 606 IKMDLSYSLESIEDPKQMKQTLFDAETVALDAKRESAFLRSENLELKEKMKELATTYKQMENDIQLYQSQLEAKKKMqVD 685
Cdd:PTZ00440 510 IKEKNNIVNNNFKNIEDYYITIEGLKNEIEGLIELIKYYLQSIETLIKDEKLKRSMKNDIKNKIKYIEENVDHIKDI-IS 588
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 686 LEKELQSAFNEITKLTSLI------------DGKVPKDLLCNLELEGKITDLQKELNKEVEENEALREE-------VILL 746
Cdd:PTZ00440 589 LNDEIDNIIQQIEELINEAlfnkekfineknDLQEKVKYILNKFYKGDLQELLDELSHFLDDHKYLYHEakskedlQTLL 668
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 747 SELKSLPSEVERLRKEIQD------KSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEFQ 820
Cdd:PTZ00440 669 NTSKNEYEKLEFMKSDNIDniiknlKKELQNLLSLKENIIKKQLNNIEQDISNSLNQYTIKYNDLKSSIEEYKEEEEKLE 748
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 821 NFKTLHMDFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRd 900
Cdd:PTZ00440 749 VYKHQIINRKNEFILHLYENDKDLPDGKNTYEEFLQYKDTILNKENKISNDINILKENKKNNQDLLNSYNILIQKLEAH- 827
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 901 stlqtVEREKTLITEKLQQTLEEVKTLTQEKDDlKQLQESLQIERDQLKsDIhDTVNMNIDTQEQLRNALESLKQHQETI 980
Cdd:PTZ00440 828 -----TEKNDEELKQLLQKFPTEDENLNLKELE-KEFNENNQIVDNIIK-DI-ENMNKNINIIKTLNIAINRSNSNKQLV 899
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 981 NTLKskiseevsrnlhmeENTGETKDEFQQKMVGIDKKQDLEAKNTQTLTADV-KDNEIIEQQRKIFSLIQEKNELQQML 1059
Cdd:PTZ00440 900 EHLL--------------NNKIDLKNKLEQHMKIINTDNIIQKNEKLNLLNNLnKEKEKIEKQLSDTKINNLKMQIEKTL 965
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1060 ESVIAEKEQLKTDLKENIEMTIENQEELRLLGDEL-------------------KKQQEIVAQEKNHAIKKEGELSRTCD 1120
Cdd:PTZ00440 966 EYYDKSKENINGNDGTHLEKLDKEKDEWEHFKSEIdklnvnynilnkkiddlikKQHDDIIELIDKLIKEKGKEIEEKVD 1045
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1121 R----LAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKI-----------NEIENLKNEL--------KNKELTLEHM 1177
Cdd:PTZ00440 1046 QyislLEKMKTKLSSFHFNIDIKKYKNPKIKEEIKLLEEKVeallkkidenkNKLIEIKNKShehvvnadKEKNKQTEHY 1125
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1178 ETERLELA---QKLNENYEEVKSITKERKVLKELQksfETERDHLRGYIREIEATGLQTKEELKIAHIHLKEHQETIDEL 1254
Cdd:PTZ00440 1126 NKKKKSLEkiyKQMEKTLKELENMNLEDITLNEVN---EIEIEYERILIDHIVEQINNEAKKSKTIMEEIESYKKDIDQV 1202
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1255 RRSVSEKTAQIINT----------QDLEKSHTKLQEEIPVLHEEQELLPNVKEVSETQETMNELELLTEQSTTKDSTTLA 1324
Cdd:PTZ00440 1203 KKNMSKERNDHLTTfeynayydkaTASYENIEELTTEAKGLKGEANRSTNVDELKEIKLQVFSYLQQVIKENNKMENALH 1282
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1325 RIE-MERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQSLNMKEKDNETTKIV 1403
Cdd:PTZ00440 1283 EIKnMYEFLISIDSEKILKEILNSTKKAEEFSNDAKKELEKTDNLIKQVEAKIEQAKEHKNKIYGSLEDKQIDDEIKKIE 1362
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1404 SEMEQFKPKDSAllrIEIEMLGLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKE----NIKEIVAKHLETEEEL 1479
Cdd:PTZ00440 1363 QIKEEISNKRKE---INKYLSNIKSNKEKCDLHVRNASRGKDKIDFLNKHEAIEPSNSKEvniiKITDNINKCKQYSNEA 1439
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1480 KVAHCCLKEQEETINELRVNLSE--KETEISTIQKQLEAINDKLQNKIQEIyeKEEQFNIKQISEV-QEKVNELKQFKEH 1556
Cdd:PTZ00440 1440 METENKADENNDSIIKYEKEITNilNNSSILGKKTKLEKKKKEATNIMDDI--NGEHSIIKTKLTKsSEKLNQLNEQPNI 1517
|
....*
gi 767930923 1557 RKAKD 1561
Cdd:PTZ00440 1518 KREGD 1522
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1428-1905 |
9.45e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 51.31 E-value: 9.45e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1428 KRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEI--VAKHLETEEELKVAHCCLKEQEETINELRV------N 1499
Cdd:COG4717 71 KELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELeeLREELEKLEKLLQLLPLYQELEALEAELAElperleE 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1500 LSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQFNIKQISEVQEKVNElkqfkehrkakdsaLQSIESKMLELTNRLQ 1579
Cdd:COG4717 151 LEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEE--------------LEELQQRLAELEEELE 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1580 ESQEEIQIMIKEKEEMKRVQEALQIErdqlkentkeivakmkESQEKEYQFLKMTAVnetqekMCEIEHLKEQFETQKLN 1659
Cdd:COG4717 217 EAQEELEELEEELEQLENELEAAALE----------------ERLKEARLLLLIAAA------LLALLGLGGSLLSLILT 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1660 LENIETENIRLTQILHENLEEMRSV-TKERDDLRSVEETLKVERDQLKENLRETITRDLEKQEELKIVHMHLKEHQETID 1738
Cdd:COG4717 275 IAGVLFLVLGLLALLFLLLAREKASlGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLR 354
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1739 KLRGIvsEKTNEISNMQKDLEHSNDALKAQDLkiqEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSN-AK 1817
Cdd:COG4717 355 EAEEL--EEELQLEELEQEIAALLAEAGVEDE---EELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDeEE 429
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1818 LQEKIQELKAnehQLITLKKDVNETQKKVSEMEQLKKQIKDQSlTLSKLEIENLNLAQKLHENLEEMKSVMKERDNLRRV 1897
Cdd:COG4717 430 LEEELEELEE---ELEELEEELEELREELAELEAELEQLEEDG-ELAELLQELEELKAELRELAEEWAALKLALELLEEA 505
|
....*...
gi 767930923 1898 EETLKLER 1905
Cdd:COG4717 506 REEYREER 513
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
719-923 |
9.74e-06 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 50.60 E-value: 9.74e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 719 EGKITDLQKELNKEVEENEALREEvillseLKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEI 798
Cdd:COG3883 15 DPQIQAKQKELSELQAELEAAQAE------LDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREEL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 799 GKTKDDLATTQSNYKSTDQEF--QNFKtlhmDFEQKYKMVLEENERmNQEIVNLSKEAQKfdsSLGALKTELSYKTQELQ 876
Cdd:COG3883 89 GERARALYRSGGSVSYLDVLLgsESFS----DFLDRLSALSKIADA-DADLLEELKADKA---ELEAKKAELEAKLAELE 160
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 767930923 877 EKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEE 923
Cdd:COG3883 161 ALKAELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAA 207
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
495-1096 |
1.01e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 51.45 E-value: 1.01e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 495 NIESELNSLRADYDNLVLDYEQLRTEKEEMEL----------KLKEKNDLDEFEALERKTKKDQEMQLIHEISNLKNLVK 564
Cdd:COG4913 222 DTFEAADALVEHFDDLERAHEALEDAREQIELlepirelaerYAAARERLAELEYLRAALRLWFAQRRLELLEAELEELR 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 565 HAEVYNQDLENELSSKVELLREKEDQIKKLQEYIDSQKLENIKMDLSySLESIEDPKQMKQTLFDAETVALDAKRESAfl 644
Cdd:COG4913 302 AELARLEAELERLEARLDALREELDELEAQIRGNGGDRLEQLEREIE-RLERELEERERRRARLEALLAALGLPLPAS-- 378
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 645 RSENLELKEKMKELATTYKQMENDIQLYQSQLEAKKKmqvDLEKELQSAFNEITKLT---SLIDGKVP--KDLLCNlELE 719
Cdd:COG4913 379 AEEFAALRAEAAALLEALEEELEALEEALAEAEAALR---DLRRELRELEAEIASLErrkSNIPARLLalRDALAE-ALG 454
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 720 GKITDLQ--KELnKEVEENEALREEVI----------LLSELKSLP---SEVERLRKE-------IQDKSEELHIITSEK 777
Cdd:COG4913 455 LDEAELPfvGEL-IEVRPEEERWRGAIervlggfaltLLVPPEHYAaalRWVNRLHLRgrlvyerVRTGLPDPERPRLDP 533
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 778 DKLFSEVVHKESRVQGLLE-EIGKTKDDLATTqsnyksTDQEFQNF-------------KTLH-MDF------------- 829
Cdd:COG4913 534 DSLAGKLDFKPHPFRAWLEaELGRRFDYVCVD------SPEELRRHpraitragqvkgnGTRHeKDDrrrirsryvlgfd 607
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 830 -EQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELS-----YKTQELQEKTREVQERLNEMEQLKEQLENRDSTL 903
Cdd:COG4913 608 nRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREalqrlAEYSWDEIDVASAEREIAELEAELERLDASSDDL 687
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 904 QTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIHDTVNM--------------NIDTQEQLRNA 969
Cdd:COG4913 688 AALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLarlelralleerfaAALGDAVEREL 767
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 970 LESLKQHQETINTLKSKISEEVSRnlHMEENTGETKDEFQQKMVGIDKKQDLEAKNTQtltadVKDNEIIEQQRKIFSLI 1049
Cdd:COG4913 768 RENLEERIDALRARLNRAEEELER--AMRAFNREWPAETADLDADLESLPEYLALLDR-----LEEDGLPEYEERFKELL 840
|
650 660 670 680
....*....|....*....|....*....|....*....|....*..
gi 767930923 1050 QEKNelqqmlesvIAEKEQLKTDLKENIEmTIEnqEELRLLGDELKK 1096
Cdd:COG4913 841 NENS---------IEFVADLLSKLRRAIR-EIK--ERIDPLNDSLKR 875
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
485-1227 |
1.11e-05 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 51.20 E-value: 1.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 485 NPATKLLNQENIESELN----SLRAD--------YDNLVLDyEQLRTEKEEMELKLKEKNDLDEFEALERKTKKDQEMQL 552
Cdd:TIGR00606 332 NKERRLLNQEKTELLVEqgrlQLQADrhqehiraRDSLIQS-LATRLELDGFERGPFSERQIKNFHTLVIERQEDEAKTA 410
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 553 IHEISNLKNLVKHAEVYNQDLENELSSKVELLREKEDQIKKLQEYIDSQK--LENIKMDLSYSLESIEDPKQMKQTLFDA 630
Cdd:TIGR00606 411 AQLCADLQSKERLKQEQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIkeLQQLEGSSDRILELDQELRKAERELSKA 490
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 631 ETVALDA--KRESAFLRSENLELKEKMKELATTYKQMENDIQ-LYQSQLEAKKKMQVDLE-------------------- 687
Cdd:TIGR00606 491 EKNSLTEtlKKEVKSLQNEKADLDRKLRKLDQEMEQLNHHTTtRTQMEMLTKDKMDKDEQirkiksrhsdeltsllgyfp 570
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 688 --KELQSAFNEITKLTSLIDGKVPKDLLCNLELEGKITDLQKELNKEVEENEALREEVILLSELKSLPSEVERLRKEIQD 765
Cdd:TIGR00606 571 nkKQLEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKLFDVCGSQDEESDLERLKEEIEK 650
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 766 KSEELHII---TSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLattqsnykstdQEFQNfktlhmDFEQKYKMVLEENER 842
Cdd:TIGR00606 651 SSKQRAMLagaTAVYSQFITQLTDENQSCCPVCQRVFQTEAEL-----------QEFIS------DLQSKLRLAPDKLKS 713
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 843 MNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTL---------I 913
Cdd:TIGR00606 714 TESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEESakvcltdvtI 793
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 914 TEKLQQTLEEV-KTLTQEKDDLKQLQESLQI----ERDQLKSDIHDTVNMNIDTQEQLRNALESLKQH-QETINTLKS-- 985
Cdd:TIGR00606 794 MERFQMELKDVeRKIAQQAAKLQGSDLDRTVqqvnQEKQEKQHELDTVVSKIELNRKLIQDQQEQIQHlKSKTNELKSek 873
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 986 -KISEEVSRNLHMEENTGETKDEFQQKMVGIDKKQDLEAKNTQTLTADVKDNEIIEQQRkifsliQEKNELQQMLESVIA 1064
Cdd:TIGR00606 874 lQIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQDSPLETFLEKDQQEKEELISSK------ETSNKKAQDKVNDIK 947
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1065 EKEQLKTDLKENIEMTIENQEelrllgDELKKQQEivaqekNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLL 1144
Cdd:TIGR00606 948 EKVKNIHGYMKDIENKIQDGK------DDYLKQKE------TELNTVNAQLEECEKHQEKINEDMRLMRQDIDTQKIQER 1015
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1145 NVQEEMSEMQKKiNEIENLKNELKNKELTLEHMETerLELAQKLNENYEEVKSITKERKVLKELQKSFETERDHLRGYIR 1224
Cdd:TIGR00606 1016 WLQDNLTLRKRE-NELKEVEEELKQHLKEMGQMQV--LQMKQEHQKLEENIDLIKRNHVLALGRQKGYEKEIKHFKKELR 1092
|
...
gi 767930923 1225 EIE 1227
Cdd:TIGR00606 1093 EPQ 1095
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
541-1103 |
1.24e-05 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 51.09 E-value: 1.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 541 ERKTKKDQEMQLiHEISNLKNLVKHAEVYNQDLENELSSKVELLREKEDQIKKLQEYIDSQKLENIKMDLSYSLESIEDP 620
Cdd:COG1196 220 EELKELEAELLL-LKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELA 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 621 KQMKQTLFDAETVAlDAKRESAFLRSENLELKEKMKELATTYKQMENDIQLYQSQLEAKKKMQVDLEKELQSAFNEITKL 700
Cdd:COG1196 299 RLEQDIARLEERRR-ELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEA 377
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 701 TSLIDGKVpKDLLcnLELEGKITDLQKELNKEVEENEALREEVILLSELKSLPSEVERLRKEIQDKSEELHIITSEKDKL 780
Cdd:COG1196 378 EEELEELA-EELL--EALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAEL 454
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 781 FSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEFQNFKTLHMDFEQKYKMVLEENERMNQEIVN--LSKEAQKFD 858
Cdd:COG1196 455 EEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAgaVAVLIGVEA 534
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 859 SSLGALKTELSYKTQELQEKTREVQERLneMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQ 938
Cdd:COG1196 535 AYEAALEAALAAALQNIVVEDDEVAAAA--IEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREAD 612
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 939 ESLQIERDQL--KSDIHDTVNMNIDTQEQLRNALESLKQHQETINTLKSKISEEVSRNLHMEENTGETKDEFQQKMvgID 1016
Cdd:COG1196 613 ARYYVLGDTLlgRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERL--AE 690
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1017 KKQDLEAKNTQTLTADVKDNEIIEQQRkifsliQEKNELQQMLESVIAEKEQLKTDLKENIEMTIENQEELRLLGDELKK 1096
Cdd:COG1196 691 EELELEEALLAEEEEERELAEAEEERL------EEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEE 764
|
....*..
gi 767930923 1097 QQEIVAQ 1103
Cdd:COG1196 765 LERELER 771
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
1085-1236 |
1.28e-05 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 50.55 E-value: 1.28e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1085 EELRLLGDELKKQQEIVAQEKNHAIKKEGElsrtcdrlAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLK 1164
Cdd:PRK12704 45 EEAKKEAEAIKKEALLEAKEEIHKLRNEFE--------KELRERRNELQKLEKRLLQKEENLDRKLELLEKREEELEKKE 116
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 767930923 1165 NELKNKELTLEHMETERLELAQKLNENYEEVKSITKE---RKVLKELQKSFETERDHlrgYIREIEAtglQTKEE 1236
Cdd:PRK12704 117 KELEQKQQELEKKEEELEELIEEQLQELERISGLTAEeakEILLEKVEEEARHEAAV---LIKEIEE---EAKEE 185
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
520-1618 |
1.35e-05 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 51.21 E-value: 1.35e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 520 EKEEMELKLKEKNDLDEFEALERKTKKDQEMQLI-HEISNLKNLVKHAEVYNQDlenELSSKVELLREKEDQIKKL---- 594
Cdd:TIGR01612 465 EKRFFEIFEEEWGSYDIKKDIDENSKQDNTVKLIlMRMKDFKDIIDFMELYKPD---EVPSKNIIGFDIDQNIKAKlyke 541
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 595 ------QEYIDSQKLENIKMDLSYSLESI-EDPKQMKQTLFDAETVALDAKRESAFLRSENLELKEKMKELATTYKQMEN 667
Cdd:TIGR01612 542 ieaglkESYELAKNWKKLIHEIKKELEEEnEDSIHLEKEIKDLFDKYLEIDDEIIYINKLKLELKEKIKNISDKNEYIKK 621
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 668 DIQLyQSQLEAKKKMQVDLEKELQSAFNEITKLTSLIDGKVPKDLlcNLELEGKITDLQKELNKEVEENEAlrEEVILLS 747
Cdd:TIGR01612 622 AIDL-KKIIENNNAYIDELAKISPYQVPEHLKNKDKIYSTIKSEL--SKIYEDDIDALYNELSSIVKENAI--DNTEDKA 696
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 748 ELKSLPSEVERLRKEIQDKSEE-----LHIITSEKDKLFSEVVHKESRVQGLL-EEIGKTKDDLATTQSNYKSTDQEFQN 821
Cdd:TIGR01612 697 KLDDLKSKIDKEYDKIQNMETAtvelhLSNIENKKNELLDIIVEIKKHIHGEInKDLNKILEDFKNKEKELSNKINDYAK 776
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 822 FKtlhmDFEQKYKMVLEE-----NERMNQEIVNLSKEAQKFDSSLGALKTelsyktqeLQEKTREVQERLNEMEQLKEQL 896
Cdd:TIGR01612 777 EK----DELNKYKSKISEiknhyNDQINIDNIKDEDAKQNYDKSKEYIKT--------ISIKEDEIFKIINEMKFMKDDF 844
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 897 ENRDSTLQTVERE-KTLITEKLQQTLEEVKTLTQEKDDlKQLQESLQIERDQlKSDIHDTVN------MNIDTQEQLRNA 969
Cdd:TIGR01612 845 LNKVDKFINFENNcKEKIDSEHEQFAELTNKIKAEISD-DKLNDYEKKFNDS-KSLINEINKsieeeyQNINTLKKVDEY 922
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 970 LESLKQHQETINTLKSK---ISEEVSRNLHMEENTGETKDEFQQKMVG--IDKKQDLEAKNTQTLTAD--VKDNEIIEQ- 1041
Cdd:TIGR01612 923 IKICENTKESIEKFHNKqniLKEILNKNIDTIKESNLIEKSYKDKFDNtlIDKINELDKAFKDASLNDyeAKNNELIKYf 1002
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1042 --------QRKIFSLIQEKNELQQMLESVIAEKEQLKTDLKeNIEMTIENQeeLRLLGDELKKQQEIVAQEKNHAIKKEG 1113
Cdd:TIGR01612 1003 ndlkanlgKNKENMLYHQFDEKEKATNDIEQKIEDANKNIP-NIEIAIHTS--IYNIIDEIEKEIGKNIELLNKEILEEA 1079
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1114 ELSRTcdRLAEVEEKLK-----------------EKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNKELTLEH 1176
Cdd:TIGR01612 1080 EINIT--NFNEIKEKLKhynfddfgkeenikyadEINKIKDDIKNLDQKIDHHIKALEEIKKKSENYIDEIKAQINDLED 1157
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1177 -----METERLELAQKLNEN-----------YEEVKSITKERKVLKELQKSFETERDHLRGYIREIEATGLQTKEELKIA 1240
Cdd:TIGR01612 1158 vadkaISNDDPEEIEKKIENivtkidkkkniYDEIKKLLNEIAEIEKDKTSLEEVKGINLSYGKNLGKLFLEKIDEEKKK 1237
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1241 HIH----LKEHQETIDELRRSVSEKTAQIINTQDLEK-------SHTKLQEEIPVLHEEQELLPNVKE------------ 1297
Cdd:TIGR01612 1238 SEHmikaMEAYIEDLDEIKEKSPEIENEMGIEMDIKAemetfniSHDDDKDHHIISKKHDENISDIREkslkiiedfsee 1317
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1298 -------------VSETQETMNELEL-LTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKERDN----LKTIKE 1359
Cdd:TIGR01612 1318 sdindikkelqknLLDAQKHNSDINLyLNEIANIYNILKLNKIKKIIDEVKEYTKEIEENNKNIKDELDKseklIKKIKD 1397
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1360 ALEVKHDQLK-------EHIRETLAKIQESQS---KQEQSL-----NMKEKDNETTKIVSEMEQFKPKDSALLRIEI--- 1421
Cdd:TIGR01612 1398 DINLEECKSKiestlddKDIDECIKKIKELKNhilSEESNIdtyfkNADENNENVLLLFKNIEMADNKSQHILKIKKdna 1477
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1422 --EMLGLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETE----------------EELKVAH 1483
Cdd:TIGR01612 1478 tnDHDFNINELKEHIDKSKGCKDEADKNAKAIEKNKELFEQYKKDVTELLNKYSALAiknkfaktkkdseiiiKEIKDAH 1557
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1484 CCLKEQ----EETINELR---------------------------VNLSEKETEISTIQKQL-------EAINDKLQNKI 1525
Cdd:TIGR01612 1558 KKFILEaeksEQKIKEIKkekfrieddaakndksnkaaidiqlslENFENKFLKISDIKKKIndclketESIEKKISSFS 1637
|
1210 1220 1230 1240 1250 1260 1270 1280
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1526 QEIYEKEEQFNIKQISEVQEKVNELKQFKEHRKAKDSALQSIESKMLELTNRLQESQE--EIQIMIKEKEEMKRVQEALQ 1603
Cdd:TIGR01612 1638 IDSQDTELKENGDNLNSLQEFLESLKDQKKNIEDKKKELDELDSEIEKIEIDVDQHKKnyEIGIIEKIKEIAIANKEEIE 1717
|
1290
....*....|....*
gi 767930923 1604 IERDQLKENTKEIVA 1618
Cdd:TIGR01612 1718 SIKELIEPTIENLIS 1732
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
938-1609 |
1.42e-05 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 50.99 E-value: 1.42e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 938 QESLQIERDQLKSDIHDT-----VNMNIDTQEQLRNALESLKQHQETINTLKSKISEEVSRNLHMEENTGETKDEFQQKM 1012
Cdd:pfam12128 213 PPKSRLNRQQVEHWIRDIqaiagIMKIRPEFTKLQQEFNTLESAELRLSHLHFGYKSDETLIASRQEERQETSAELNQLL 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1013 VGIDK--KQDLEAKNTQTLTADVK------DNEIIEQQRKIFsliqekneLQQMLESVIAEKEQLktdlkENIEMTIENQ 1084
Cdd:pfam12128 293 RTLDDqwKEKRDELNGELSAADAAvakdrsELEALEDQHGAF--------LDADIETAAADQEQL-----PSWQSELENL 359
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1085 EELR--LLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEV-EEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINE-- 1159
Cdd:pfam12128 360 EERLkaLTGKHQDVTAKYNRRRSKIKEQNNRDIAGIKDKLAKIrEARDRQLAVAEDDLQALESELREQLEAGKLEFNEee 439
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1160 --IENLKNELKNKELTLEHMETERLELAQK---LNENYEEVKSITKERKVLKELQKSFETERDhlrgyireieatglQTK 1234
Cdd:pfam12128 440 yrLKSRLGELKLRLNQATATPELLLQLENFderIERAREEQEAANAEVERLQSELRQARKRRD--------------QAS 505
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1235 EELKIAHIHLKEHQETIDELRRSVSEKTAQII-----NTQDLEKSHTKLQEeiPVLHEEQELLPNVKEVSETQETmnele 1309
Cdd:pfam12128 506 EALRQASRRLEERQSALDELELQLFPQAGTLLhflrkEAPDWEQSIGKVIS--PELLHRTDLDPEVWDGSVGGEL----- 578
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1310 llteqsttkdSTTLARIEMERLRLNEKFQESQEeiksLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQS 1389
Cdd:pfam12128 579 ----------NLYGVKLDLKRIDVPEWAASEEE----LRERLDKAEEALQSAREKQAAAEEQLVQANGELEKASREETFA 644
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1390 LN-MKEKDNETTKIVSEMEQFKPKDSAllrieiemlGLSKRLQESHDEMKSVAKEKDDLQR-LQEVLQSESDQLKENIKE 1467
Cdd:pfam12128 645 RTaLKNARLDLRRLFDEKQSEKDKKNK---------ALAERKDSANERLNSLEAQLKQLDKkHQAWLEEQKEQKREARTE 715
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1468 IVAKHLETEEELKVAHCCLKEQEETINE-LRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQfnIKQISEVQEK 1546
Cdd:pfam12128 716 KQAYWQVVEGALDAQLALLKAAIAARRSgAKAELKALETWYKRDLASLGVDPDVIAKLKREIRTLERK--IERIAVRRQE 793
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 767930923 1547 VNELKQFKEH-----RKAKDSALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQL 1609
Cdd:pfam12128 794 VLRYFDWYQEtwlqrRPRLATQLSNIERAISELQQQLARLIADTKLRRAKLEMERKASEKQQVRLSEN 861
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
1065-1676 |
1.73e-05 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 50.49 E-value: 1.73e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1065 EKEQLKTDLKENIEMTIENQEELRL------------LGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLKEK 1132
Cdd:pfam05483 180 ETRQVYMDLNNNIEKMILAFEELRVqaenarlemhfkLKEDHEKIQHLEEEYKKEINDKEKQVSLLLIQITEKENKMKDL 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1133 SQQLQEKQQQLLNVQEE---MSEMQKKINEIEN-LKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKERKVLKEL 1208
Cdd:pfam05483 260 TFLLEESRDKANQLEEKtklQDENLKELIEKKDhLTKELEDIKMSLQRSMSTQKALEEDLQIATKTICQLTEEKEAQMEE 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1209 QKSFETERDHLrgyIREIEATGLQTKEELKIAHIHLKEHQETIDELRRSVSEKTAQIINTQDLEKS-HTKLQEEIPVLHE 1287
Cdd:pfam05483 340 LNKAKAAHSFV---VTEFEATTCSLEELLRTEQQRLEKNEDQLKIITMELQKKSSELEEMTKFKNNkEVELEELKKILAE 416
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1288 EQELLPNVKEVSETQETMNELELLTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQ 1367
Cdd:pfam05483 417 DEKLLDEKKQFEKIAEELKGKEQELIFLLQAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKTELEKEKLKNIELTAHCDK 496
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1368 L----KEHIRETLAKIQESQSKQEQSLNMKEKDNETTKIVSEMEQFKPK---DSALLRIEIEMLG--LSKRLQESHDEMK 1438
Cdd:pfam05483 497 LllenKELTQEASDMTLELKKHQEDIINCKKQEERMLKQIENLEEKEMNlrdELESVREEFIQKGdeVKCKLDKSEENAR 576
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1439 SVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNLSEKETEISTIQKQLEAIN 1518
Cdd:pfam05483 577 SIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQENKALKKKGSAENKQLNAYEIKVNKLELELASAKQKFEEII 656
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1519 DKLQNKIQEiyekeeqfnikqisevqEKVNELKQFKEHRKAKDSALQSIESKMlELTNRLQES-QEEIQIMIKEKEEMKR 1597
Cdd:pfam05483 657 DNYQKEIED-----------------KKISEEKLLEEVEKAKAIADEAVKLQK-EIDKRCQHKiAEMVALMEKHKHQYDK 718
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 767930923 1598 VQEalqiERDQlkentkeiVAKMKESQEKEYQFLKMTAVNETQEKMCEIEHLKEQFETQKLNLENIETENIRLTQILHE 1676
Cdd:pfam05483 719 IIE----ERDS--------ELGLYKNKEQEQSSAKAALEIELSNIKAELLSLKKQLEIEKEEKEKLKMEAKENTAILKD 785
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
493-989 |
1.87e-05 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 50.32 E-value: 1.87e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 493 QENIESELNSLRADYDNLVLDYEQLRtekEEMELKLKEKNDLDEFEALERKTKKDQEMQLIHEISNLKNLVKHAEVYNQD 572
Cdd:COG1196 262 LAELEAELEELRLELEELELELEEAQ---AEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEE 338
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 573 LENELSSKVELLREKEDQIKKLQeyidsQKLENIKMDLSYSLESIEDPKQMKQTLFDAETVALDAKRESAFLRSENLELK 652
Cdd:COG1196 339 LEELEEELEEAEEELEEAEAELA-----EAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALL 413
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 653 EKMKELATTYKQMENDIQLYQSQLEAKKKMQVDLEKELQSAFNEITKLTSLIDGKVPKDLLCNLELEGKITDLQK----- 727
Cdd:COG1196 414 ERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEaaarl 493
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 728 ELNKEVEENEALREEVILLSELKSLPSEVER-LRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTK---- 802
Cdd:COG1196 494 LLLLEAEADYEGFLEGVKAALLLAGLRGLAGaVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAkagr 573
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 803 ------DDLATTQSNYKSTDQEFQNFKTLHMDFEQKY----KMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELS-YK 871
Cdd:COG1196 574 atflplDKIRARAALAAALARGAIGAAVDLVASDLREadarYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTlEG 653
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 872 TQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSD 951
Cdd:COG1196 654 EGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAE 733
|
490 500 510
....*....|....*....|....*....|....*...
gi 767930923 952 IHDTVNMNIDTQEQLRNALESLKQHQETINTLKSKISE 989
Cdd:COG1196 734 REELLEELLEEEELLEEEALEELPEPPDLEELERELER 771
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1486-1683 |
1.89e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 49.76 E-value: 1.89e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1486 LKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQFNI--KQISEVQEKVNELKQFKEHRKaKDSA 1563
Cdd:COG4942 29 LEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAAleAELAELEKEIAELRAELEAQK-EELA 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1564 LQSIESKMLELTNRLQE--SQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKmKESQEKEYQFLKmTAVNETQE 1641
Cdd:COG4942 108 ELLRALYRLGRQPPLALllSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAAL-RAELEAERAELE-ALLAELEE 185
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 767930923 1642 KMCEIEHLKEQFETQKLNLENIETENIRLTQILHENLEEMRS 1683
Cdd:COG4942 186 ERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEA 227
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
512-785 |
1.91e-05 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 50.31 E-value: 1.91e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 512 LDYEQLRtEKEEMELKLKEKndLDEFEALERKTKKDQEMQLIHEISNLKNLVKHAEVYNQDLENELSSKVELLREKEDQI 591
Cdd:PRK05771 40 LSNERLR-KLRSLLTKLSEA--LDKLRSYLPKLNPLREEKKKVSVKSLEELIKDVEEELEKIEKEIKELEEEISELENEI 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 592 KKLQEYIDS-QKLENIKMDLSYslesiedpkqmkqtLFDAETVALDAKRESAFLRSENLELKEKMKELATTYKQMENDIQ 670
Cdd:PRK05771 117 KELEQEIERlEPWGNFDLDLSL--------------LLGFKYVSVFVGTVPEDKLEELKLESDVENVEYISTDKGYVYVV 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 671 LYqsqleAKKKMQVDLEKELqsAFNEITKLtSLIDGKVPKDLLCNL-----ELEGKITDLQKELNK-------------E 732
Cdd:PRK05771 183 VV-----VLKELSDEVEEEL--KKLGFERL-ELEEEGTPSELIREIkeeleEIEKERESLLEELKElakkyleellalyE 254
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 767930923 733 VEENEALREEViLLSELKS---------LPSE-VERLRKEIQDKSEELHIITSEKDKLFSEVV 785
Cdd:PRK05771 255 YLEIELERAEA-LSKFLKTdktfaiegwVPEDrVKKLKELIDKATGGSAYVEFVEPDEEEEEV 316
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
1488-2470 |
2.01e-05 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 50.44 E-value: 2.01e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1488 EQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQFNIKQISEVQEKVNELKQF--KEHRKAKDSALQ 1565
Cdd:TIGR01612 679 ELSSIVKENAIDNTEDKAKLDDLKSKIDKEYDKIQNMETATVELHLSNIENKKNELLDIIVEIKKHihGEINKDLNKILE 758
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1566 SIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQierDQLK-ENTKEIVAKMKESQEKEYQFLKMTAVNETQEKMC 1644
Cdd:TIGR01612 759 DFKNKEKELSNKINDYAKEKDELNKYKSKISEIKNHYN---DQINiDNIKDEDAKQNYDKSKEYIKTISIKEDEIFKIIN 835
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1645 EIEHLKEQFETQK---LNLENIETENIRLTqilHENLEEMRSVTKER--DDLRSVEETLKVERDQLKENLRETITRDLEK 1719
Cdd:TIGR01612 836 EMKFMKDDFLNKVdkfINFENNCKEKIDSE---HEQFAELTNKIKAEisDDKLNDYEKKFNDSKSLINEINKSIEEEYQN 912
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1720 QEELKIVHMHLKEHQETIDKLRGIVSEKT--NEISNMQKDLehsndalkaqdlkiqeelrIAHMHLKEQQETiDKLRGIV 1797
Cdd:TIGR01612 913 INTLKKVDEYIKICENTKESIEKFHNKQNilKEILNKNIDT-------------------IKESNLIEKSYK-DKFDNTL 972
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1798 SEKTDKLSNMQKDL-----ENSNAKLQEKIQELKAN--EHQLITLKKDVNETQKKVSEMEQlkkQIKDQSLTLSKLEIEN 1870
Cdd:TIGR01612 973 IDKINELDKAFKDAslndyEAKNNELIKYFNDLKANlgKNKENMLYHQFDEKEKATNDIEQ---KIEDANKNIPNIEIAI 1049
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1871 LNLAQKLHENLEEM--KSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKTARMLSKEhKETVDKLREKIS 1948
Cdd:TIGR01612 1050 HTSIYNIIDEIEKEigKNIELLNKEILEEAEINITNFNEIKEKLKHYNFDDFGKEENIKYADEINKI-KDDIKNLDQKID 1128
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1949 EKTIQISDIQKDLDKSKDELQKKDRQNHQVKpEKRLLSDGQQHLTESLREKCSRIKELLKRYSEMDDHYECLNRLSLDlE 2028
Cdd:TIGR01612 1129 HHIKALEEIKKKSENYIDEIKAQINDLEDVA-DKAISNDDPEEIEKKIENIVTKIDKKKNIYDEIKKLLNEIAEIEKD-K 1206
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2029 KEIEFQKELSMRVKANLSLPYLQTKHIEKLFTANQRCSMEfhRIMKKLKYVLSYVTKIKEEQH-ESINKFEMDF--IDEV 2105
Cdd:TIGR01612 1207 TSLEEVKGINLSYGKNLGKLFLEKIDEEKKKSEHMIKAME--AYIEDLDEIKEKSPEIENEMGiEMDIKAEMETfnISHD 1284
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2106 EKQKELLIKIQHLQQDCDVPSRELRdlklnqnmdlhieeILKDFS-ESEFPSIKTEFQQVLSNRKEMTQFLEEWLNtrfd 2184
Cdd:TIGR01612 1285 DDKDHHIISKKHDENISDIREKSLK--------------IIEDFSeESDINDIKKELQKNLLDAQKHNSDINLYLN---- 1346
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2185 ieklkngiqkendricQVNNFFN----NRIIAIMNESTEFEERSatisKEWEQDLKSLKEKNEKLFK------NYQTLKT 2254
Cdd:TIGR01612 1347 ----------------EIANIYNilklNKIKKIIDEVKEYTKEI----EENNKNIKDELDKSEKLIKkikddiNLEECKS 1406
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2255 SLAS---GAQVNPTTQDNK--NPHVTSRATQLTTEKIRELENS-----LHEAKESAMHKESKIIKMQKElEVTNDI---I 2321
Cdd:TIGR01612 1407 KIEStldDKDIDECIKKIKelKNHILSEESNIDTYFKNADENNenvllLFKNIEMADNKSQHILKIKKD-NATNDHdfnI 1485
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2322 AKLQAKVHESNKC-LEKTKETIQVLQDKVALgaKPYKEEIEDLKMKLVKIdlekmknakEFEKEISATKATVEyqkEVIR 2400
Cdd:TIGR01612 1486 NELKEHIDKSKGCkDEADKNAKAIEKNKELF--EQYKKDVTELLNKYSAL---------AIKNKFAKTKKDSE---IIIK 1551
|
970 980 990 1000 1010 1020 1030
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2401 LLREnlrrsqqAQDTSVISEHTDPQPSNKpltcgggsgivqntkaliLKSEHIRLEKEISKLKQQNEQLI 2470
Cdd:TIGR01612 1552 EIKD-------AHKKFILEAEKSEQKIKE------------------IKKEKFRIEDDAAKNDKSNKAAI 1596
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
1666-2477 |
2.01e-05 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 50.36 E-value: 2.01e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1666 ENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETITRDLEKQEELKIVHMHLKEHQETIDKlrgivs 1745
Cdd:pfam02463 167 LKRKKKEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERID------ 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1746 EKTNEISNMQKDLEHSNDALKAQDLKIQEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKdlensnAKLQEKIQEL 1825
Cdd:pfam02463 241 LLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLK------LERRKVDDEE 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1826 KANEHQLITLKKDvNETQKKVSEMEQLKKQIKDQSLTLSKLEIENLNLAQKLHENLEEMKSVMKERDNLRRVEETLKLER 1905
Cdd:pfam02463 315 KLKESEKEKKKAE-KELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLK 393
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1906 DQLKESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKIsEKTIQISDIQKDLDKSKDELQKKDRQN---------- 1975
Cdd:pfam02463 394 EEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEE-EESIELKQGKLTEEKEELEKQELKLLKdelelkksed 472
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1976 ---------HQVKPEKRLLSDGQQHLTESLREKCSRIKEL------------------LKRYSEMDDHYECLNRLSLDLE 2028
Cdd:pfam02463 473 llketqlvkLQEQLELLLSRQKLEERSQKESKARSGLKVLlalikdgvggriisahgrLGDLGVAVENYKVAISTAVIVE 552
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2029 ----KEIEFQKELSMRVKANLSLPYLQTKHIEKLFTANQRCSMEFH-----RIMKKLKYVLSYVTKIKEEQHESINKFEM 2099
Cdd:pfam02463 553 vsatADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEidpilNLAQLDKATLEADEDDKRAKVVEGILKDT 632
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2100 DFIDEVEKQKELLIKIQHLQQDCDVPSRELRDLKLNQNMDLHIEEILKDFSESEFPSIKTEFQQVLSNRKEMTQ-FLEEW 2178
Cdd:pfam02463 633 ELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQrEKEEL 712
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2179 LNTRFDIEKLKNGIQKENDRICQVNNFFNNRIIAIMNESTEFEERSATISKEWEQDLKSLKEKNEKLFKNYQTLKTSLAS 2258
Cdd:pfam02463 713 KKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEK 792
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2259 GAQVNPTTQDNKNPHVTSRATQLTTEKIRELENSLHEAKESAMHKESKIIKMQKELEvtndiiAKLQAKVHESNKCLEKT 2338
Cdd:pfam02463 793 EEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLE------KLAEEELERLEEEITKE 866
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2339 KETIQVLQDKVALGAKPYKEEIEDLKMKLVKIDLEKMKNAKEFEKEISATKATVEYQKEVIRLLRENL---RRSQQAQDT 2415
Cdd:pfam02463 867 ELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEeepEELLLEEAD 946
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 767930923 2416 SVISEHTDPQPSNKPLTCGGGSGIVQNTKALILKSEHIRLEKEISKLKQQNEQLIKQKNELL 2477
Cdd:pfam02463 947 EKEKEENNKEEEEERNKRLLLAKEELGKVNLMAIEEFEEKEERYNKDELEKERLEEEKKKLI 1008
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
1520-2123 |
2.53e-05 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 49.72 E-value: 2.53e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1520 KLQNKIQEIYEKEEQFNIKQISEVQEKVNELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQIMIKE-------- 1591
Cdd:pfam05483 78 RLYSKLYKEAEKIKKWKVSIEAELKQKENKLQENRKIIEAQRKAIQELQFENEKVSLKLEEEIQENKDLIKEnnatrhlc 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1592 ---KEEMKRVQEALQiERDQLKENTKEIVAKMKESQEK---EYQFLKMTAVN-------ETQEKMCEIEHLKEQFETQKL 1658
Cdd:pfam05483 158 nllKETCARSAEKTK-KYEYEREETRQVYMDLNNNIEKmilAFEELRVQAENarlemhfKLKEDHEKIQHLEEEYKKEIN 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1659 NLEN-IETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVErdqlKENLRETITRDLEKQEELKIVHMHLKEHQETI 1737
Cdd:pfam05483 237 DKEKqVSLLLIQITEKENKMKDLTFLLEESRDKANQLEEKTKLQ----DENLKELIEKKDHLTKELEDIKMSLQRSMSTQ 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1738 DKLRGIVSEKTNEISNMQKD----LEHSNDALKAQDLKIQeELRIAHMHLKEQQETIDKLrgiVSEKTDKLSNMQKDLEN 1813
Cdd:pfam05483 313 KALEEDLQIATKTICQLTEEkeaqMEELNKAKAAHSFVVT-EFEATTCSLEELLRTEQQR---LEKNEDQLKIITMELQK 388
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1814 SNAKLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQLKK-----QIKDQSLT--LSKLEIENLNLAQKLHENLEEMKS 1886
Cdd:pfam05483 389 KSSELEEMTKFKNNKEVELEELKKILAEDEKLLDEKKQFEKiaeelKGKEQELIflLQAREKEIHDLEIQLTAIKTSEEH 468
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1887 VMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKDLDKSKD 1966
Cdd:pfam05483 469 YLKEVEDLKTELEKEKLKNIELTAHCDKLLLENKELTQEASDMTLELKKHQEDIINCKKQEERMLKQIENLEEKEMNLRD 548
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1967 ELQKKDRQNHQVKPEKRLlsdgqqHLTESLREKCSRIKELLKRYSEMDDHYECLNRLSLDLEKEIEFQKELSMRVKANLS 2046
Cdd:pfam05483 549 ELESVREEFIQKGDEVKC------KLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQENKALKK 622
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 767930923 2047 LPYLQTKHIEKLFTANQRCSMEFHRIMKKLKYVLSYVTKIKEEQHESinkfEMDFIDEVEKQKELLIKIQHLQQDCD 2123
Cdd:pfam05483 623 KGSAENKQLNAYEIKVNKLELELASAKQKFEEIIDNYQKEIEDKKIS----EEKLLEEVEKAKAIADEAVKLQKEID 695
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1439-1611 |
2.95e-05 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 48.00 E-value: 2.95e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1439 SVAKEKDDLQRLQEvLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNLSEKETEISTIQKQLEAIN 1518
Cdd:COG1579 1 AMPEDLRALLDLQE-LDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYE 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1519 DKLQ----NKIQEIYEKEEQFNIKQISEVQEkvnELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQimiKEKEE 1594
Cdd:COG1579 80 EQLGnvrnNKEYEALQKEIESLKRRISDLED---EILELMERIEELEEELAELEAELAELEAELEEKKAELD---EELAE 153
|
170
....*....|....*..
gi 767930923 1595 MKRVQEALQIERDQLKE 1611
Cdd:COG1579 154 LEAELEELEAEREELAA 170
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
863-1104 |
3.05e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.99 E-value: 3.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 863 ALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEkddLKQLQESLQ 942
Cdd:COG4942 24 EAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKE---IAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 943 IERDQLKsdihdtvnmnidtqEQLRnALESLKQHQETINTLKSKISEEVSRNLHMeentgetkdefQQKMVGIDKKQDLE 1022
Cdd:COG4942 101 AQKEELA--------------ELLR-ALYRLGRQPPLALLLSPEDFLDAVRRLQY-----------LKYLAPARREQAEE 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1023 AKNTQTLTADVKDnEIIEQQRKIFSLIQEKNELQQMLESVIAEKEQLKTDLKEN-------IEMTIENQEELRLLGDELK 1095
Cdd:COG4942 155 LRADLAELAALRA-ELEAERAELEALLAELEEERAALEALKAERQKLLARLEKElaelaaeLAELQQEAEELEALIARLE 233
|
....*....
gi 767930923 1096 KQQEIVAQE 1104
Cdd:COG4942 234 AEAAAAAER 242
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
1524-1998 |
3.19e-05 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 49.84 E-value: 3.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1524 KIQEIYEKEEQFNIKQISEVQEKVNELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQIMIK-EKEEMKRVQEAL 1602
Cdd:pfam12128 245 KLQQEFNTLESAELRLSHLHFGYKSDETLIASRQEERQETSAELNQLLRTLDDQWKEKRDELNGELSaADAAVAKDRSEL 324
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1603 QIERDQLKENTKEIVAKMKESQEKEYQFLKMTAVNETQEKMCEIEHLKEQFETQKLNLeNIETENIRLTQILHENLEEMR 1682
Cdd:pfam12128 325 EALEDQHGAFLDADIETAAADQEQLPSWQSELENLEERLKALTGKHQDVTAKYNRRRS-KIKEQNNRDIAGIKDKLAKIR 403
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1683 S-----VTKERDDLRSVEETLKVERDQLKENLRETITRDLEKQEELKIVHMHLKEHQETIDKLRGIVSEktneISNMQKD 1757
Cdd:pfam12128 404 EardrqLAVAEDDLQALESELREQLEAGKLEFNEEEYRLKSRLGELKLRLNQATATPELLLQLENFDER----IERAREE 479
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1758 LEHSNdalkAQDLKIQEELRiahmhlkeqqetidKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLIT-LK 1836
Cdd:pfam12128 480 QEAAN----AEVERLQSELR--------------QARKRRDQASEALRQASRRLEERQSALDELELQLFPQAGTLLHfLR 541
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1837 KDV---NETQKKVSEMEQLKKQIKDQSLTLSKLEIENLNLAQKLH-ENLEEMKSVMkerdnlrrVEETLKLERDQLKESL 1912
Cdd:pfam12128 542 KEApdwEQSIGKVISPELLHRTDLDPEVWDGSVGGELNLYGVKLDlKRIDVPEWAA--------SEEELRERLDKAEEAL 613
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1913 QETKARDLEIQQELKTARM-LSKEHKETVDKLR--EKISEKTIQISDIQKDLDKSKDE-----LQKKDRQNHQVKPEKRL 1984
Cdd:pfam12128 614 QSAREKQAAAEEQLVQANGeLEKASREETFARTalKNARLDLRRLFDEKQSEKDKKNKalaerKDSANERLNSLEAQLKQ 693
|
490
....*....|....
gi 767930923 1985 LSDGQQHLTESLRE 1998
Cdd:pfam12128 694 LDKKHQAWLEEQKE 707
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
1025-1388 |
3.96e-05 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 49.35 E-value: 3.96e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1025 NTQTLTADVKDNEI--IEQQRKIFSLIQEKNELQQM-LESVIAEKEQLKTDLKENIEMtiENQEELRllGDELKKQQEIV 1101
Cdd:pfam17380 261 NGQTMTENEFLNQLlhIVQHQKAVSERQQQEKFEKMeQERLRQEKEEKAREVERRRKL--EEAEKAR--QAEMDRQAAIY 336
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1102 AQEKNHAIKKEGELSRTcdrlaEVEEKLKEKSQQLqekqqqllnvQEEMSEMQKKINEIENLKNELKNKEltlEHMETEr 1181
Cdd:pfam17380 337 AEQERMAMERERELERI-----RQEERKRELERIR----------QEEIAMEISRMRELERLQMERQQKN---ERVRQE- 397
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1182 LELAQKLNENYEEVKSITKERKVLKELQKSFETErdhlrgyIREIEATGLQTKEELKIAHIHLK--EHQETIDELRRSVS 1259
Cdd:pfam17380 398 LEAARKVKILEEERQRKIQQQKVEMEQIRAEQEE-------ARQREVRRLEEERAREMERVRLEeqERQQQVERLRQQEE 470
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1260 EKTAQIINtQDLEKSHTKLQEEIPVLHEEQELLPNVKEVSETQETMNELELLTEQSTTKDSTTLARIEMERLRLNEKFQE 1339
Cdd:pfam17380 471 ERKRKKLE-LEKEKRDRKRAEEQRRKILEKELEERKQAMIEEERKRKLLEKEMEERQKAIYEEERRREAEEERRKQQEME 549
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 767930923 1340 S----QEEIKSLTKERDNLKTIkealevkhdqlkEHIRETLAKIQESQSKQEQ 1388
Cdd:pfam17380 550 ErrriQEQMRKATEERSRLEAM------------EREREMMRQIVESEKARAE 590
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1323-1479 |
4.02e-05 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 47.61 E-value: 4.02e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1323 LARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQSLNMKEKDNettkI 1402
Cdd:COG1579 19 LDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNNKEYEA----L 94
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 767930923 1403 VSEMEQFKPKDSALLRIEIEMLGLSKRLQESHDEMKS-VAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEEL 1479
Cdd:COG1579 95 QKEIESLKRRISDLEDEILELMERIEELEEELAELEAeLAELEAELEEKKAELDEELAELEAELEELEAEREELAAKI 172
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
1429-1918 |
4.07e-05 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 48.97 E-value: 4.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1429 RLQESHDEMKSVAKEKDdlqRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINElrvnlsekETEIS 1508
Cdd:pfam05557 10 RLSQLQNEKKQMELEHK---RARIELEKKASALKRQLDRESDRNQELQKRIRLLEKREAEAEEALRE--------QAELN 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1509 TIQKQLEAINDKLQNkiqeiyEKEEQFNikQISEVQ-EKVNELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQI 1587
Cdd:pfam05557 79 RLKKKYLEALNKKLN------EKESQLA--DAREVIsCLKNELSELRRQIQRAELELQSTNSELEELQERLDLLKAKASE 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1588 MIKEKEEMKRVQEALQIERDQLKENTKEIvakmkESQEKEYQFLKmtAVNETQEKMCEIEHLKEQFETQKLNLenieTEN 1667
Cdd:pfam05557 151 AEQLRQNLEKQQSSLAEAEQRIKELEFEI-----QSQEQDSEIVK--NSKSELARIPELEKELERLREHNKHL----NEN 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1668 IRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLretitrdlekQEELKIVHMHLKEHQETIDKLRGIVSEK 1747
Cdd:pfam05557 220 IENKLLLKEEVEDLKRKLEREEKYREEAATLELEKEKLEQEL----------QSWVKLAQDTGLNLRSPEDLSRRIEQLQ 289
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1748 TNEISNMQK--DLEHSNDALKAQDLKIQEELRIAHMH-------LKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKL 1818
Cdd:pfam05557 290 QREIVLKEEnsSLTSSARQLEKARRELEQELAQYLKKiedlnkkLKRHKALVRRLQRRVLLLTKERDGYRAILESYDKEL 369
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1819 QEKIQELKANEhQLITLKKDVNETQKKVSEME----QLKKQIKDQSLTLSKLEIENLNLAQKlhENLEEMKSVMKERDNL 1894
Cdd:pfam05557 370 TMSNYSPQLLE-RIEEAEDMTQKMQAHNEEMEaqlsVAEEELGGYKQQAQTLERELQALRQQ--ESLADPSYSKEEVDSL 446
|
490 500
....*....|....*....|....
gi 767930923 1895 RRVEETLKLERDQLKESLQETKAR 1918
Cdd:pfam05557 447 RRKLETLELERQRLREQKNELEME 470
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1186-1688 |
4.08e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 49.00 E-value: 4.08e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1186 QKLNENYEEVKSITKERKVLKELQKSFETERDHLRGYIREIEAtgLQTKEELKIAHIHLKEHQETIDELRRSVSEKTAQI 1265
Cdd:COG4717 64 RKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEE--LEAELEELREELEKLEKLLQLLPLYQELEALEAEL 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1266 intQDLEKSHTKLQEEIPVLHEEQELLPNVKEvsETQETMNELELLTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIK 1345
Cdd:COG4717 142 ---AELPERLEELEERLEELRELEEELEELEA--ELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELE 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1346 SLTKERDNLKTIKEALEVKHdqlkehireTLAKIQESQSKQEQSLNmkekdneTTKIVSEMEQFKPKDSALLRIEIEMLG 1425
Cdd:COG4717 217 EAQEELEELEEELEQLENEL---------EAAALEERLKEARLLLL-------IAAALLALLGLGGSLLSLILTIAGVLF 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1426 LSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHccLKEQEETINELRVNLSEKET 1505
Cdd:COG4717 281 LVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEE--LLELLDRIEELQELLREAEE 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1506 EISTIQKQleaindKLQNKIQEIYEKEEQFNIKQISEVQEKVNELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEI 1585
Cdd:COG4717 359 LEEELQLE------ELEQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDEEELEE 432
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1586 QImikekEEMKRVQEALQIERDQLKENTKEIVAKMKESQEKEyqflkmtavnetqekmcEIEHLKEQFETQKLNLENIET 1665
Cdd:COG4717 433 EL-----EELEEELEELEEELEELREELAELEAELEQLEEDG-----------------ELAELLQELEELKAELRELAE 490
|
490 500
....*....|....*....|...
gi 767930923 1666 ENIRLtQILHENLEEMRSVTKER 1688
Cdd:COG4717 491 EWAAL-KLALELLEEAREEYREE 512
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
873-1468 |
4.51e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 49.14 E-value: 4.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 873 QELQEKTREVQERLNEMEQLKEQLEnrdstLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDI 952
Cdd:COG4913 258 RELAERYAAARERLAELEYLRAALR-----LWFAQRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQI 332
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 953 hdtvnMNIDTQ--EQLRNALESLKQHQETINTlKSKISEEVSRNLHMEENtgETKDEFQQKMVGI----DKKQDLEAKNT 1026
Cdd:COG4913 333 -----RGNGGDrlEQLEREIERLERELEERER-RRARLEALLAALGLPLP--ASAEEFAALRAEAaallEALEEELEALE 404
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1027 QTLTAdvKDNEIIEQQRKIFSLIQEKNELQQMLESVIAEKEQLKTDLKENIEMTienQEELRLLGDELkkqqEIVAQEKN 1106
Cdd:COG4913 405 EALAE--AEAALRDLRRELRELEAEIASLERRKSNIPARLLALRDALAEALGLD---EAELPFVGELI----EVRPEEER 475
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1107 --HAIkkEGELS--RTC-----DRLAEV-----EEKLKEKsqqlqekqqqllnVQ-EEMSEMQKKINEIENLKNELKNKE 1171
Cdd:COG4913 476 wrGAI--ERVLGgfALTllvppEHYAAAlrwvnRLHLRGR-------------LVyERVRTGLPDPERPRLDPDSLAGKL 540
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1172 LTLEHMETERL--ELAQKLN----ENYEEV----KSITKERKVlkelqKSFETERDH-LRGYIREIEATGLQTKEelKIA 1240
Cdd:COG4913 541 DFKPHPFRAWLeaELGRRFDyvcvDSPEELrrhpRAITRAGQV-----KGNGTRHEKdDRRRIRSRYVLGFDNRA--KLA 613
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1241 HIhlkehQETIDELRRSVSEKTAQIINTQDLEKSHTKLQEEIPVLHEEQELLPNVKEVSET-QETMNELELLteqstTKD 1319
Cdd:COG4913 614 AL-----EAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEIDVASAEREiAELEAELERL-----DAS 683
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1320 STTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLK------------------------EHIRET 1375
Cdd:COG4913 684 SDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQdrleaaedlarlelralleerfaaALGDAV 763
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1376 LAKIQESQSKQEQSLNmKEKDNETTKIVSEMEQFK---PKDSALLRIEIEMLG----LSKRLQESH-----DEMKSVAKE 1443
Cdd:COG4913 764 ERELRENLEERIDALR-ARLNRAEEELERAMRAFNrewPAETADLDADLESLPeylaLLDRLEEDGlpeyeERFKELLNE 842
|
650 660
....*....|....*....|....*..
gi 767930923 1444 --KDDLQRLQEVLQSESDQLKENIKEI 1468
Cdd:COG4913 843 nsIEFVADLLSKLRRAIREIKERIDPL 869
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1678-1930 |
4.79e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 49.14 E-value: 4.79e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1678 LEEMRSVTKERDDLRSVEETLKVERDQlkenlRETITRDLEKQEELKIVHMHLKEHQETIDKLRGIVSEKtnEISNMQKD 1757
Cdd:COG4913 224 FEAADALVEHFDDLERAHEALEDAREQ-----IELLEPIRELAERYAAARERLAELEYLRAALRLWFAQR--RLELLEAE 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1758 LEHSNDALKAQdlkiQEELRIAHMHLKEQQETIDKLRGIVSE-KTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLK 1836
Cdd:COG4913 297 LEELRAELARL----EAELERLEARLDALREELDELEAQIRGnGGDRLEQLEREIERLERELEERERRRARLEALLAALG 372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1837 KDVNETQKkvsEMEQLKKQIKDQSLTLSkleienlnlaqklhenlEEMKSVMKERDNLRRVEETLKLERDQLKESLQETK 1916
Cdd:COG4913 373 LPLPASAE---EFAALRAEAAALLEALE-----------------EELEALEEALAEAEAALRDLRRELRELEAEIASLE 432
|
250
....*....|....
gi 767930923 1917 ARDLEIQQELKTAR 1930
Cdd:COG4913 433 RRKSNIPARLLALR 446
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1564-1724 |
5.29e-05 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 47.23 E-value: 5.29e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1564 LQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKMKESQE--KEYQFLKMTAVNETqe 1641
Cdd:COG1579 12 LQELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEAriKKYEEQLGNVRNNK-- 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1642 kmcEIEHLKEQFETQKLNLENIETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETITRDLEKQE 1721
Cdd:COG1579 90 ---EYEALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAERE 166
|
...
gi 767930923 1722 ELK 1724
Cdd:COG1579 167 ELA 169
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
880-1211 |
5.70e-05 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 48.58 E-value: 5.70e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 880 REVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQT-LEEVKTLTQEkddlkqlQESLQIERDQLKSDIHdtvnm 958
Cdd:pfam17380 287 RQQQEKFEKMEQERLRQEKEEKAREVERRRKLEEAEKARQAeMDRQAAIYAE-------QERMAMERERELERIR----- 354
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 959 nidtQEQLRNALESLKQHQetintlkskISEEVSRNLHMEentgETKDEFQQKMVGIdkKQDLEAKNTQTLTADVKDNEI 1038
Cdd:pfam17380 355 ----QEERKRELERIRQEE---------IAMEISRMRELE----RLQMERQQKNERV--RQELEAARKVKILEEERQRKI 415
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1039 IEQQRKIFSLIQEKNELQQMLESVIAEKEQLKTDLKENIEMTIENQEElRLLGDELKKQQEIVAQEKNHAIKKEGELSRT 1118
Cdd:pfam17380 416 QQQKVEMEQIRAEQEEARQREVRRLEEERAREMERVRLEEQERQQQVE-RLRQQEEERKRKKLELEKEKRDRKRAEEQRR 494
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1119 cdrlAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNKELTLEHMETERL-ELAQKLNENYEEVKS 1197
Cdd:pfam17380 495 ----KILEKELEERKQAMIEEERKRKLLEKEMEERQKAIYEEERRREAEEERRKQQEMEERRRIqEQMRKATEERSRLEA 570
|
330
....*....|....
gi 767930923 1198 ITKERKVLKELQKS 1211
Cdd:pfam17380 571 MEREREMMRQIVES 584
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
685-1212 |
7.61e-05 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 48.36 E-value: 7.61e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 685 DLEKELQSAFNEITKLTSLIDGKVPKDLLCNLELEGKITDLQKELNKEVEENEALREEVILLSELKSLPSEVERLRKEIQ 764
Cdd:PRK01156 187 YLEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALNELSSLEDMKNRYESEIKTAESDLS 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 765 DKSEELHIITSEKDKLF----SEVVHKESRVQGL------------------------------LEEIGKTKDDLATTQS 810
Cdd:PRK01156 267 MELEKNNYYKELEERHMkiinDPVYKNRNYINDYfkykndienkkqilsnidaeinkyhaiikkLSVLQKDYNDYIKKKS 346
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 811 NYKSTDQEFQNFKTLHMDF-------EQKYKMVLEEN---ERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTR 880
Cdd:PRK01156 347 RYDDLNNQILELEGYEMDYnsylksiESLKKKIEEYSkniERMSAFISEILKIQEIDPDAIKKELNEINVKLQDISSKVS 426
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 881 EVQERLNEMEQLKEQLENRDSTL----------------------QTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQ 938
Cdd:PRK01156 427 SLNQRIRALRENLDELSRNMEMLngqsvcpvcgttlgeeksnhiiNHYNEKKSRLEEKIREIEIEVKDIDEKIVDLKKRK 506
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 939 ESLQIERdqlksdihdtVNMNIDTQEQLRNALESLKQHQETINTLKSKiseevsrnlhmeentgETKDEFQQKMVGIDKK 1018
Cdd:PRK01156 507 EYLESEE----------INKSINEYNKIESARADLEDIKIKINELKDK----------------HDKYEEIKNRYKSLKL 560
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1019 QDLEAKNTQTLTAD-VKDNEIIEQQRKIFSLIQEK-NELQQMLESVIAEKEQLKTDLKENIEmtiENQEELRLLGDELKK 1096
Cdd:PRK01156 561 EDLDSKRTSWLNALaVISLIDIETNRSRSNEIKKQlNDLESRLQEIEIGFPDDKSYIDKSIR---EIENEANNLNNKYNE 637
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1097 QQEIVAQEKnhaikkegELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNKELTLEH 1176
Cdd:PRK01156 638 IQENKILIE--------KLRGKIDNYKKQIAEIDSIIPDLKEITSRINDIEDNLKKSRKALDDAKANRARLESTIEILRT 709
|
570 580 590
....*....|....*....|....*....|....*.
gi 767930923 1177 METERLELAQKLNENYEEVKSITKERKVLKELQKSF 1212
Cdd:PRK01156 710 RINELSDRINDINETLESMKKIKKAIGDLKRLREAF 745
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1428-1629 |
8.03e-05 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 47.52 E-value: 8.03e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1428 KRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNLSEKETEI 1507
Cdd:COG3883 23 KELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERARALYRSGGSV 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1508 STIQ---------------KQLEAINDKLQNKIQEIYEKEEQFNIKQiSEVQEKVNELKQFK----EHRKAKDSALQSIE 1568
Cdd:COG3883 103 SYLDvllgsesfsdfldrlSALSKIADADADLLEELKADKAELEAKK-AELEAKLAELEALKaeleAAKAELEAQQAEQE 181
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 767930923 1569 SKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKMKESQEKEYQ 1629
Cdd:COG3883 182 ALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 242
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
543-802 |
8.03e-05 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 48.00 E-value: 8.03e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 543 KTKKDQEMQLIHEIsnlkNLVkHAEVYNQDLENE-----------LSSKVELLR---EKEDQIKKLQEYIDSQKLENIKM 608
Cdd:PRK05771 15 KSYKDEVLEALHEL----GVV-HIEDLKEELSNErlrklrslltkLSEALDKLRsylPKLNPLREEKKKVSVKSLEELIK 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 609 DLSYSLESIEDpkqmkqtlfdaetvaldakresaflrsenlELKEKMKELattyKQMENDIQLYQSQLEAKKKMQ---VD 685
Cdd:PRK05771 90 DVEEELEKIEK------------------------------EIKELEEEI----SELENEIKELEQEIERLEPWGnfdLD 135
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 686 LEKELQSafneitKLTSLIDGKVPKDLLCNLELEGKIT--------------------DLQKELNKEVEENEALREEV-- 743
Cdd:PRK05771 136 LSLLLGF------KYVSVFVGTVPEDKLEELKLESDVEnveyistdkgyvyvvvvvlkELSDEVEEELKKLGFERLELee 209
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 767930923 744 ---------ILLSELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESrvqgLLEEIGKTK 802
Cdd:PRK05771 210 egtpselirEIKEELEEIEKERESLLEELKELAKKYLEELLALYEYLEIELERAE----ALSKFLKTD 273
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
1665-2036 |
8.14e-05 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 48.20 E-value: 8.14e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1665 TENIRLTQILHenLEEMRSVTKERDDLRSVEetlKVERDQLKENlRETITRDLEKQEELKIVHmhlKEHQETIDKLRGIV 1744
Cdd:pfam17380 266 TENEFLNQLLH--IVQHQKAVSERQQQEKFE---KMEQERLRQE-KEEKAREVERRRKLEEAE---KARQAEMDRQAAIY 336
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1745 SEKTNEISNMQKDLEhsndalkaqdlKIQEELRIAHMHLKEQQETIDKLrgivsEKTDKLSNMQKDLENSNAKLQekiQE 1824
Cdd:pfam17380 337 AEQERMAMERERELE-----------RIRQEERKRELERIRQEEIAMEI-----SRMRELERLQMERQQKNERVR---QE 397
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1825 LKANEHQLITLKKDVNETQKKVSEMEQLKKQIKdqsltlskleienlNLAQKLHENLEEMKSVMKERDNLRRVEETLKLE 1904
Cdd:pfam17380 398 LEAARKVKILEEERQRKIQQQKVEMEQIRAEQE--------------EARQREVRRLEEERAREMERVRLEEQERQQQVE 463
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1905 RdqLKESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKDLDKskdelQKKDRQNHQVKPEKRL 1984
Cdd:pfam17380 464 R--LRQQEEERKRKKLELEKEKRDRKRAEEQRRKILEKELEERKQAMIEEERKRKLLEK-----EMEERQKAIYEEERRR 536
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 767930923 1985 LSDGQQHLTESLREKcSRIKELLKRYSEMDDHYECLNRLSLDLEKEIEFQKE 2036
Cdd:pfam17380 537 EAEEERRKQQEMEER-RRIQEQMRKATEERSRLEAMEREREMMRQIVESEKA 587
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1805-1974 |
9.35e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.45 E-value: 9.35e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1805 SNMQKDLENSNAKLQEKIQE----LKANEHQLITLKKDVNETQKKVSEMEQ----LKKQIKDQSLTLSKLEIENLNLAQK 1876
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAElekeLAALKKEEKALLKQLAALERRIAALARriraLEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1877 LHENLEEMKSVM-------------------------KERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKTARM 1931
Cdd:COG4942 99 LEAQKEELAELLralyrlgrqpplalllspedfldavRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEA 178
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 767930923 1932 LSKEHKETVDKLREKISEKTIQISDIQKDLDKSKDELQKKDRQ 1974
Cdd:COG4942 179 LLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQE 221
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
1674-2382 |
1.08e-04 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 47.81 E-value: 1.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1674 LHENLEEMRsvtKERDDLRSVEETLKVERDQLKENLRETItRDLEKQEELKivHMHLKEHQETIDKLRGIVSEKT---NE 1750
Cdd:pfam15921 115 LQTKLQEMQ---MERDAMADIRRRESQSQEDLRNQLQNTV-HELEAAKCLK--EDMLEDSNTQIEQLRKMMLSHEgvlQE 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1751 ISNMQKDLEhsndalKAQDLKIQEELRIAHMHLKEQQETIDK-LRGIVSEKT---DKLSNMQKDLENSNAKLQEKIqELK 1826
Cdd:pfam15921 189 IRSILVDFE------EASGKKIYEHDSMSTMHFRSLGSAISKiLRELDTEISylkGRIFPVEDQLEALKSESQNKI-ELL 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1827 ANEHQlITLKKDVNETQKKVSEMEQLKKQIKDQSLTL-SKLEIENlnlAQKLHENLEEMKsvmkerdNLRRVEETLKLER 1905
Cdd:pfam15921 262 LQQHQ-DRIEQLISEHEVEITGLTEKASSARSQANSIqSQLEIIQ---EQARNQNSMYMR-------QLSDLESTVSQLR 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1906 DQLKESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKDLDKSKDELQKKDRQNHQVKPEKRLL 1985
Cdd:pfam15921 331 SELREAKRMYEDKIEELEKQLVLANSELTEARTERDQFSQESGNLDDQLQKLLADLHKREKELSLEKEQNKRLWDRDTGN 410
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1986 SDGQQHLTESLREK---CSRIKELLKRYS-----EMDDHYECLNRLSLDLEKEIEFQKELSmrvkanlSLPYLQTKHIEK 2057
Cdd:pfam15921 411 SITIDHLRRELDDRnmeVQRLEALLKAMKsecqgQMERQMAAIQGKNESLEKVSSLTAQLE-------STKEMLRKVVEE 483
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2058 LfTANQRCSMEFHRIMKKLKYVLSYVTKIKEEQHESINKFEMDF---IDEVEKQKELLIKIQHLQQDCDVpsrelrdLKL 2134
Cdd:pfam15921 484 L-TAKKMTLESSERTVSDLTASLQEKERAIEATNAEITKLRSRVdlkLQELQHLKNEGDHLRNVQTECEA-------LKL 555
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2135 NQNMDLHIEEILKDFSESEFPSIKTEFQQVLSNRKEMTQFLEEWLNTRFDIEKLKNGIQKENDRICQVNNFFNN---RII 2211
Cdd:pfam15921 556 QMAEKDKVIEILRQQIENMTQLVGQHGRTAGAMQVEKAQLEKEINDRRLELQEFKILKDKKDAKIRELEARVSDlelEKV 635
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2212 AIMNESTEFEERSATISKEWEQDLKSLKE-KNE--KLFKNYQTLKTSLASGAQVNPTTQDNKNPHVTSRATQLttekiRE 2288
Cdd:pfam15921 636 KLVNAGSERLRAVKDIKQERDQLLNEVKTsRNElnSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSEL-----EQ 710
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2289 LENSLHEAKESAMHKESKIIKMQKELEVTNDIIAKLQAKVHESNKCLEKTKETIQVLqdkvalgakpyKEEIEDLKMKLV 2368
Cdd:pfam15921 711 TRNTLKSMEGSDGHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFL-----------KEEKNKLSQELS 779
|
730
....*....|....
gi 767930923 2369 KIDLEKMKNAKEFE 2382
Cdd:pfam15921 780 TVATEKNKMAGELE 793
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
576-973 |
1.12e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 47.45 E-value: 1.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 576 ELSSKVELLREKEDQIKKLQEYIDSqklenikmdLSYSLESIEDpkqmKQTLFDAETVALDAKRESAFLRSENLELKEKM 655
Cdd:COG4717 75 ELEEELKEAEEKEEEYAELQEELEE---------LEEELEELEA----ELEELREELEKLEKLLQLLPLYQELEALEAEL 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 656 KELATTYKQMENDIQLYQSQLEAKKKMQVDLEkELQSAFNEITKLTSLIDGKVPKDLLCNLE-LEGKITDLQKELNKEVE 734
Cdd:COG4717 142 AELPERLEELEERLEELRELEEELEELEAELA-ELQEELEELLEQLSLATEEELQDLAEELEeLQQRLAELEEELEEAQE 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 735 ENEALREEVILLSELKSLPSEVERLRKEIQDKSEE--LHIITSEKDKLFSEVVH---------------------KESRV 791
Cdd:COG4717 221 ELEELEEELEQLENELEAAALEERLKEARLLLLIAaaLLALLGLGGSLLSLILTiagvlflvlgllallflllarEKASL 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 792 QGLLEEIGKTKDDLATTQSNYKSTDQEFQNFKTLHMDFEQKYKMVLEENERMNQEIVNLSKEAQ------KFDSSLGALK 865
Cdd:COG4717 301 GKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQleeleqEIAALLAEAG 380
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 866 TELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTL--ITEKLQQTLEEVKTLTQEKDDLKQLQESLQI 943
Cdd:COG4717 381 VEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDEeeLEEELEELEEELEELEEELEELREELAELEA 460
|
410 420 430
....*....|....*....|....*....|
gi 767930923 944 ERDQLKSDihDTVNMNIDTQEQLRNALESL 973
Cdd:COG4717 461 ELEQLEED--GELAELLQELEELKAELREL 488
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
859-1116 |
1.14e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 47.13 E-value: 1.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 859 SSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTverektlITEKLQQTLEEVKTLTQEKDDLKQLQ 938
Cdd:COG3883 2 LALALAAPTPAFADPQIQAKQKELSELQAELEAAQAELDALQAELEE-------LNEEYNELQAELEALQAEIDKLQAEI 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 939 ESLQIERDQLksdihdtvnmnidtQEQLRNALESLKQHQETINTLKSKISeevSRNLhmeentgetkDEFQQKMVGIDKK 1018
Cdd:COG3883 75 AEAEAEIEER--------------REELGERARALYRSGGSVSYLDVLLG---SESF----------SDFLDRLSALSKI 127
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1019 QDLEAKNTQTLTADVKDNE-----IIEQQRKIFSLIQEKNELQQMLESVIAEKEQLKTDLKENIEMTIENQEELRLLGDE 1093
Cdd:COG3883 128 ADADADLLEELKADKAELEakkaeLEAKLAELEALKAELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAA 207
|
250 260
....*....|....*....|...
gi 767930923 1094 LKKQQEIVAQEKNHAIKKEGELS 1116
Cdd:COG3883 208 AEAAAAAAAAAAAAAAAAAAAAA 230
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1817-1970 |
1.42e-04 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 45.69 E-value: 1.42e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1817 KLQEKIQELKANEHQLITLKKDVNETQKKV----SEMEQLKKQIKDQSLTLSKLEIENLNLAQKLHENLEEMKSVM--KE 1890
Cdd:COG1579 11 DLQELDSELDRLEHRLKELPAELAELEDELaaleARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRnnKE 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1891 RDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKTARmlsKEHKETVDKLREKISEKTIQISDIQKDLDKSKDELQK 1970
Cdd:COG1579 91 YEALQKEIESLKRRISDLEDEILELMERIEELEEELAELE---AELAELEAELEEKKAELDEELAELEAELEELEAEREE 167
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
1319-1948 |
1.57e-04 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 47.53 E-value: 1.57e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1319 DSTTLARIEMERLRLNEKFQESQEEIKSLTKERDN-LKTIKEALEVKHDQLKEHIRETL-------AKIQESQSK----Q 1386
Cdd:pfam12128 249 EFNTLESAELRLSHLHFGYKSDETLIASRQEERQEtSAELNQLLRTLDDQWKEKRDELNgelsaadAAVAKDRSElealE 328
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1387 EQSLNMKEKDNETTKIVSEME-QFKPKDSALLRIEIEMLGLSKRLQESHDEMKSVAKE--KDDLQRLQEVLqsesdqlkE 1463
Cdd:pfam12128 329 DQHGAFLDADIETAAADQEQLpSWQSELENLEERLKALTGKHQDVTAKYNRRRSKIKEqnNRDIAGIKDKL--------A 400
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1464 NIKEIVAKHLETEEELKVAHCclkeqeetiNELRVNLSEKETEISTIQKQLEAINDKLQNKI-QEIYEKEEQFNIKQIse 1542
Cdd:pfam12128 401 KIREARDRQLAVAEDDLQALE---------SELREQLEAGKLEFNEEEYRLKSRLGELKLRLnQATATPELLLQLENF-- 469
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1543 vQEKVNELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQIMIKE-KEEMKRVQEALQIERDQLKENTKEIVAKMK 1621
Cdd:pfam12128 470 -DERIERAREEQEAANAEVERLQSELRQARKRRDQASEALRQASRRLEErQSALDELELQLFPQAGTLLHFLRKEAPDWE 548
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1622 ESQEKEYqflkmtavneTQEKMCEIEHLKEQFETQKLNLENIETENIRLTQILH-------ENLEEMRSVTKE-----RD 1689
Cdd:pfam12128 549 QSIGKVI----------SPELLHRTDLDPEVWDGSVGGELNLYGVKLDLKRIDVpewaaseEELRERLDKAEEalqsaRE 618
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1690 DLRSVEETLKVERDQL-KENLRETITRDLEKQEELKIVHMHLKEHQETIDKLRGIVSEKT------NEISNMQKDLEHSN 1762
Cdd:pfam12128 619 KQAAAEEQLVQANGELeKASREETFARTALKNARLDLRRLFDEKQSEKDKKNKALAERKDsanerlNSLEAQLKQLDKKH 698
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1763 DALKAQdlkIQEELRIAHMHLKEqqetidKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITlKKDVNET 1842
Cdd:pfam12128 699 QAWLEE---QKEQKREARTEKQA------YWQVVEGALDAQLALLKAAIAARRSGAKAELKALETWYKRDLA-SLGVDPD 768
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1843 QkkvseMEQLKKQIKDQSLTLSKLEIENLNLAQkLHENLEEMKSVMKER--DNLRRVEETLKLERDQLKESLQETKARDL 1920
Cdd:pfam12128 769 V-----IAKLKREIRTLERKIERIAVRRQEVLR-YFDWYQETWLQRRPRlaTQLSNIERAISELQQQLARLIADTKLRRA 842
|
650 660
....*....|....*....|....*...
gi 767930923 1921 EIQQELKTARMLSKEHKETVDKLREKIS 1948
Cdd:pfam12128 843 KLEMERKASEKQQVRLSENLRGLRCEMS 870
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1783-1970 |
1.64e-04 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 47.34 E-value: 1.64e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1783 LKEQQETIDKLRGIVSEKTDK-LSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDVNET----QKKVSEMEQLKKQIK 1857
Cdd:PRK02224 182 LSDQRGSLDQLKAQIEEKEEKdLHERLNGLESELAELDEEIERYEEQREQARETRDEADEVleehEERREELETLEAEIE 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1858 DQSLTLSKLEIENLNLAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKTARMLSKEHK 1937
Cdd:PRK02224 262 DLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHN 341
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 767930923 1938 ETVDKLREKI-------SEKTIQISDIQKDLDKSKDELQK 1970
Cdd:PRK02224 342 EEAESLREDAddleeraEELREEAAELESELEEAREAVED 381
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1764-2502 |
1.79e-04 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 47.36 E-value: 1.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1764 ALKAQDLKIQE---ELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDVN 1840
Cdd:TIGR02168 212 AERYKELKAELrelELALLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELY 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1841 ETQKKVSEMEQLKKQIKDQ----SLTLSKLEIENLNLAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETK 1916
Cdd:TIGR02168 292 ALANEISRLEQQKQILRERlanlERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELE 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1917 ARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKDLDKSKDELQK--KDRQNHQVKPEKRLLSDGQQHLTE 1994
Cdd:TIGR02168 372 SRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEEllKKLEEAELKELQAELEELEEELEE 451
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1995 sLREKCSRIKELLKRYSEMDDHYECLNRLSLDLEKEIEFQKELSMRVKANLSLPYlqtKHIEKLFTANQRCSMEFHRIMK 2074
Cdd:TIGR02168 452 -LQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFS---EGVKALLKNQSGLSGILGVLSE 527
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2075 KLKYVLSYVTKIKEEQHESINKFEMDFIDEVEKQKELLikiqhlqqdcdVPSRELRDLKLnqnmdlhieeILKDFSESEF 2154
Cdd:TIGR02168 528 LISVDEGYEAAIEAALGGRLQAVVVENLNAAKKAIAFL-----------KQNELGRVTFL----------PLDSIKGTEI 586
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2155 PSiktefqqvlsNRKEMTQFLEEWLNTRFDIEKLKNGIQKendricQVNNFFNNRIIAimnestefeersatiskeweqd 2234
Cdd:TIGR02168 587 QG----------NDREILKNIEGFLGVAKDLVKFDPKLRK------ALSYLLGGVLVV---------------------- 628
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2235 lKSLKEKNEKLFKNYQTLKTSLASGAQVNPTTQDNKNPHVTSRATQLTTEKIRELENSLHEAKESAMHKESKIIKMQKEL 2314
Cdd:TIGR02168 629 -DDLDNALELAKKLRPGYRIVTLDGDLVRPGGVITGGSAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKEL 707
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2315 EVTNDIIAKLQAKVHESNKCLEKTKETIQVLQDKVALGAKPY---KEEIEDLKMKLVKIDLEKMKN---AKEFEKEISAT 2388
Cdd:TIGR02168 708 EELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIaqlSKELTELEAEIEELEERLEEAeeeLAEAEAEIEEL 787
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2389 KATVEYQKEVIRLLRENLrRSQQAQDTSVISEHTDPQPSNKPLTCGGGSGIVQNTKaliLKSEHIRLEKEISKLKQQNEQ 2468
Cdd:TIGR02168 788 EAQIEQLKEELKALREAL-DELRAELTLLNEEAANLRERLESLERRIAATERRLED---LEEQIEELSEDIESLAAEIEE 863
|
730 740 750
....*....|....*....|....*....|....
gi 767930923 2469 LIKQKNELLSNNQHLSNEVKTWKERTLKREAHKQ 2502
Cdd:TIGR02168 864 LEELIEELESELEALLNERASLEEALALLRSELE 897
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
837-1216 |
1.82e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 47.07 E-value: 1.82e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 837 LEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQ--EKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLIT 914
Cdd:COG4717 80 LKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEklEKLLQLLPLYQELEALEAELAELPERLEELEERLEELR 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 915 EKLQQtleevktLTQEKDDLKQLQESLQIERDQLKSDIHDTVNMNIDTQEQLRNALESLKQHQETINTLKSKISEEVSR- 993
Cdd:COG4717 160 ELEEE-------LEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQl 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 994 -----NLHMEENTGETK---------------------------------------------------DEFQQKMVGIDK 1017
Cdd:COG4717 233 eneleAAALEERLKEARlllliaaallallglggsllsliltiagvlflvlgllallflllarekaslGKEAEELQALPA 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1018 KQDLEAKNTQTLTADVKDNEIIEQQRkIFSLIQEKNELQQMLESVIAEKEQLKTDLKEN------IEMTIENQEELRLLG 1091
Cdd:COG4717 313 LEELEEEELEELLAALGLPPDLSPEE-LLELLDRIEELQELLREAEELEEELQLEELEQeiaallAEAGVEDEEELRAAL 391
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1092 DELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEV-EEKLKEKsqqLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNK 1170
Cdd:COG4717 392 EQAEEYQELKEELEELEEQLEELLGELEELLEALdEEELEEE---LEELEEELEELEEELEELREELAELEAELEQLEED 468
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 767930923 1171 ElTLEHMETERLELAQKLNENYEEVKSITKERKVLKELQKSFETER 1216
Cdd:COG4717 469 G-ELAELLQELEELKAELRELAEEWAALKLALELLEEAREEYREER 513
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
721-931 |
1.89e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 46.30 E-value: 1.89e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 721 KITDLQKELNKEVEENEALREEVI-LLSELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIG 799
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAaLKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 800 KTKDDLAT-TQSNYKSTDQEFQNFKTLHMDFEQKYKM------VLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKT 872
Cdd:COG4942 101 AQKEELAElLRALYRLGRQPPLALLLSPEDFLDAVRRlqylkyLAPARREQAEELRADLAELAALRAELEAERAELEALL 180
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 767930923 873 QELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEK 931
Cdd:COG4942 181 AELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAA 239
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
837-1515 |
1.96e-04 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 47.02 E-value: 1.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 837 LEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLkeQLENRDSTL---QTVEREKTLI 913
Cdd:pfam05483 70 FENSEGLSRLYSKLYKEAEKIKKWKVSIEAELKQKENKLQENRKIIEAQRKAIQEL--QFENEKVSLkleEEIQENKDLI 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 914 TEK-----LQQTLEEVKTLTQEKDDLKQLQESlqiERDQLKSDIHDTVNMNIDTQEQLRNALES--------LKQHQETI 980
Cdd:pfam05483 148 KENnatrhLCNLLKETCARSAEKTKKYEYERE---ETRQVYMDLNNNIEKMILAFEELRVQAENarlemhfkLKEDHEKI 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 981 NTLKSKISEEVSRN--------LHMEENTGETKDEFQQKMVGIDKKQDLEAKntqTLTADVKDNEIIEQQRKIFSLIQE- 1051
Cdd:pfam05483 225 QHLEEEYKKEINDKekqvslllIQITEKENKMKDLTFLLEESRDKANQLEEK---TKLQDENLKELIEKKDHLTKELEDi 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1052 KNELQQMLESVIAEKEQLKTDLKENIEMTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLK- 1130
Cdd:pfam05483 302 KMSLQRSMSTQKALEEDLQIATKTICQLTEEKEAQMEELNKAKAAHSFVVTEFEATTCSLEELLRTEQQRLEKNEDQLKi 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1131 ------EKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKERKV 1204
Cdd:pfam05483 382 itmelqKKSSELEEMTKFKNNKEVELEELKKILAEDEKLLDEKKQFEKIAEELKGKEQELIFLLQAREKEIHDLEIQLTA 461
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1205 LKELQKSFETERDHLRG-----YIREIEATG------LQTKE---ELKIAHIHLKEHQETIDELRRSVSEKTAQIintQD 1270
Cdd:pfam05483 462 IKTSEEHYLKEVEDLKTelekeKLKNIELTAhcdkllLENKEltqEASDMTLELKKHQEDIINCKKQEERMLKQI---EN 538
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1271 LEKSHTKLQEEIPVLHEE-----QELLPNVKEVSETQETMNELELLTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIK 1345
Cdd:pfam05483 539 LEEKEMNLRDELESVREEfiqkgDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQENK 618
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1346 SLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQSLNMKEKDNEttKIVSEMEQFKPKDSALLRIEIEmlg 1425
Cdd:pfam05483 619 ALKKKGSAENKQLNAYEIKVNKLELELASAKQKFEEIIDNYQKEIEDKKISEE--KLLEEVEKAKAIADEAVKLQKE--- 693
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1426 LSKRLQESHDEMKSvakekddlqrLQEVLQSESDQLKEnikeivakhlETEEELKVAHCCLKEQEETINELRVNLSEKET 1505
Cdd:pfam05483 694 IDKRCQHKIAEMVA----------LMEKHKHQYDKIIE----------ERDSELGLYKNKEQEQSSAKAALEIELSNIKA 753
|
730
....*....|
gi 767930923 1506 EISTIQKQLE 1515
Cdd:pfam05483 754 ELLSLKKQLE 763
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
514-949 |
2.01e-04 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 46.66 E-value: 2.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 514 YEQLRTEKEEMELKLK------EKNDLDEFEALERKTKKDQEMQ----LIHEISNLKNLVKHAEV-YNQDLENELSSKVE 582
Cdd:pfam05557 11 LSQLQNEKKQMELEHKrarielEKKASALKRQLDRESDRNQELQkrirLLEKREAEAEEALREQAeLNRLKKKYLEALNK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 583 LLREKEDQIKKLQEYIDS---------QKLENIKMDLSYSLESIEDPKQMKQTlfdaetvaLDAKRESAFLRSENLELKE 653
Cdd:pfam05557 91 KLNEKESQLADAREVISClknelselrRQIQRAELELQSTNSELEELQERLDL--------LKAKASEAEQLRQNLEKQQ 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 654 K-MKELATTYKQMENDIQLYQSQLEAKKKMQV------DLEKELQSAFNEITKLTSLIDGkvpkdllcNLELEGKITDLQ 726
Cdd:pfam05557 163 SsLAEAEQRIKELEFEIQSQEQDSEIVKNSKSelaripELEKELERLREHNKHLNENIEN--------KLLLKEEVEDLK 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 727 KELNKEveenEALREEVILLS-ELKSLPSEVERLRKEIQDKSEELhiitSEKDKLFSEVVHKESRVQGLLEEIGKTKDDL 805
Cdd:pfam05557 235 RKLERE----EKYREEAATLElEKEKLEQELQSWVKLAQDTGLNL----RSPEDLSRRIEQLQQREIVLKEENSSLTSSA 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 806 ATTQSNYKSTDQEFQNFKTLHMDFEQKYKMVLEENERMNQEIVNLSKE-------AQKFDSSLGALKT--ELSYKTQELQ 876
Cdd:pfam05557 307 RQLEKARRELEQELAQYLKKIEDLNKKLKRHKALVRRLQRRVLLLTKErdgyraiLESYDKELTMSNYspQLLERIEEAE 386
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 767930923 877 EKTREVQERLNEME----QLKEQLENRDSTLQTVEREKTLIteKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLK 949
Cdd:pfam05557 387 DMTQKMQAHNEEMEaqlsVAEEELGGYKQQAQTLERELQAL--RQQESLADPSYSKEEVDSLRRKLETLELERQRLR 461
|
|
| PRK04778 |
PRK04778 |
septation ring formation regulator EzrA; Provisional |
1669-1968 |
2.03e-04 |
|
septation ring formation regulator EzrA; Provisional
Pssm-ID: 179877 [Multi-domain] Cd Length: 569 Bit Score: 46.75 E-value: 2.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1669 RLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETITRDLEKQEELKivhmhlkehqETIDKLRgivsekt 1748
Cdd:PRK04778 109 EIESLLDLIEEDIEQILEELQELLESEEKNREEVEQLKDLYRELRKSLLANRFSFG----------PALDELE------- 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1749 NEISNMQKDLEhsndalKAQDLKIQEELRIAHMHLKEQQETIDKLRgivsEKTDKLSNMQKDLENsnaKLQEKIQELKAN 1828
Cdd:PRK04778 172 KQLENLEEEFS------QFVELTESGDYVEAREILDQLEEELAALE----QIMEEIPELLKELQT---ELPDQLQELKAG 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1829 EHQLITlKKDVNETQKKVSEMEQLKKQIKDQSLTLSKLEIENLN-LAQKLHENLEEMKSVM-KERDNLRRVEETLKLERD 1906
Cdd:PRK04778 239 YRELVE-EGYHLDHLDIEKEIQDLKEQIDENLALLEELDLDEAEeKNEEIQERIDQLYDILeREVKARKYVEKNSDTLPD 317
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 767930923 1907 QLKESLQETKARDLEIQQ----------ELKTARMLSKEHKET---VDKLREKISEKTIQISDIQKDLDKSKDEL 1968
Cdd:PRK04778 318 FLEHAKEQNKELKEEIDRvkqsytlnesELESVRQLEKQLESLekqYDEITERIAEQEIAYSELQEELEEILKQL 392
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
515-743 |
2.28e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 46.30 E-value: 2.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 515 EQLRTEKEEMELKLKEKNDldefealERKTKKDQEMQLIHEISNLKNLVKHAEVYNQDLENELSSKVELLREKEDQIKKL 594
Cdd:COG4942 23 AEAEAELEQLQQEIAELEK-------ELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAEL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 595 QEYIDSQKLENIKMDLSYSLESIEDPKQMkqtLFDAETvALDAKRESAFLRSENLELKEKMKELATTYKQME---NDIQL 671
Cdd:COG4942 96 RAELEAQKEELAELLRALYRLGRQPPLAL---LLSPED-FLDAVRRLQYLKYLAPARREQAEELRADLAELAalrAELEA 171
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 767930923 672 YQSQLEAKKKMQVDLEKELQSAFNEITKLTSLIDGKVPKDLLCNLELEGKITDLQKELNKEVEENEALREEV 743
Cdd:COG4942 172 ERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERT 243
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
1430-1594 |
2.60e-04 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 46.31 E-value: 2.60e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1430 LQESHDEMKSVAKEKddlqrLQEVlQSESDQLKEnikeivakhlETEEELKVAHCCLKEQEETINELRVNLSEKETEIST 1509
Cdd:PRK12704 44 LEEAKKEAEAIKKEA-----LLEA-KEEIHKLRN----------EFEKELRERRNELQKLEKRLLQKEENLDRKLELLEK 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1510 IQKQLEAINDKLQNKIQEIYEKEEqfnikqisEVQEKVNELKQFKEHRkakdSALQSIESKMLELTNRLQESQEEIQIMI 1589
Cdd:PRK12704 108 REEELEKKEKELEQKQQELEKKEE--------ELEELIEEQLQELERI----SGLTAEEAKEILLEKVEEEARHEAAVLI 175
|
....*
gi 767930923 1590 KEKEE 1594
Cdd:PRK12704 176 KEIEE 180
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1146-1362 |
2.81e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.91 E-value: 2.81e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1146 VQEEMSEMQKKIN----EIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKErkvLKELQKSFETERDHLRG 1221
Cdd:COG4942 32 LQQEIAELEKELAalkkEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKE---IAELRAELEAQKEELAE 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1222 YIREIEATGLQTKEELKIahihlkeHQETIDELRRSVsektaqiintQDLEKSHTKLQEEIPVLHEEQELLPNVKEVSET 1301
Cdd:COG4942 109 LLRALYRLGRQPPLALLL-------SPEDFLDAVRRL----------QYLKYLAPARREQAEELRADLAELAALRAELEA 171
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 767930923 1302 QETMNElELLTEQSTTKDSTTLARIEMERL--RLNEKFQESQEEIKSLTKERDNLKTIKEALE 1362
Cdd:COG4942 172 ERAELE-ALLAELEEERAALEALKAERQKLlaRLEKELAELAAELAELQQEAEELEALIARLE 233
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
820-1228 |
2.92e-04 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 46.27 E-value: 2.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 820 QNFKTLHMDFEQKYKMVLEENE---RMNQEIVNLSKEAQKFDSSLGALKTELsyktQELQEKTREVQERLNEMEQLKEQL 896
Cdd:pfam05557 83 KYLEALNKKLNEKESQLADAREvisCLKNELSELRRQIQRAELELQSTNSEL----EELQERLDLLKAKASEAEQLRQNL 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 897 ENRDSTLQTVE-REKTLITEKLQQT--LEEVKTLTQEK---DDLKQLQESLQIERDQLKSDIHD---------------- 954
Cdd:pfam05557 159 EKQQSSLAEAEqRIKELEFEIQSQEqdSEIVKNSKSELariPELEKELERLREHNKHLNENIENklllkeevedlkrkle 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 955 ----------TVNMNIDTQEQLRNALESLKQ-HQETINT---LKSKISEEVSRNL-HMEENTGETKDEFQQKMVGIDKKQ 1019
Cdd:pfam05557 239 reekyreeaaTLELEKEKLEQELQSWVKLAQdTGLNLRSpedLSRRIEQLQQREIvLKEENSSLTSSARQLEKARRELEQ 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1020 DLEAKNTQTLTADVKDNEIIEQ----QRKIFSLIQEKNELQQMLESVIAEKEQLKTDLKENiemtienqEELRLLGDELK 1095
Cdd:pfam05557 319 ELAQYLKKIEDLNKKLKRHKALvrrlQRRVLLLTKERDGYRAILESYDKELTMSNYSPQLL--------ERIEEAEDMTQ 390
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1096 KQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNvqEEMSEMQKKINEIENLKNELKNKELTLE 1175
Cdd:pfam05557 391 KMQAHNEEMEAQLSVAEEELGGYKQQAQTLERELQALRQQESLADPSYSK--EEVDSLRRKLETLELERQRLREQKNELE 468
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 767930923 1176 hMETERLELAQKLNENYEEV-----KSITKERKVLKELQKSFETERDHLRGYIREIEA 1228
Cdd:pfam05557 469 -MELERRCLQGDYDPKKTKVlhlsmNPAAEAYQQRKNQLEKLQAEIERLKRLLKKLED 525
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
758-2022 |
3.07e-04 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 46.32 E-value: 3.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 758 RLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEigktkddlattqsnykstdqefqnfktlhmdfeqkyKMVL 837
Cdd:pfam01576 2 RQEEEMQAKEEELQKVKERQQKAESELKELEKKHQQLCEE------------------------------------KNAL 45
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 838 EENERMNQEIVNLSKEaqkfdsslgaLKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRdstlqtverektliTEKL 917
Cdd:pfam01576 46 QEQLQAETELCAEAEE----------MRARLAARKQELEEILHELESRLEEEEERSQQLQNE--------------KKKM 101
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 918 QQTLEEVKTLTQEKDDLKQlqeSLQIERDQLKSDIhdtvnmnidtqeqlrnaleslKQHQETINTLKSKISEEVSRNLHM 997
Cdd:pfam01576 102 QQHIQDLEEQLDEEEAARQ---KLQLEKVTTEAKI---------------------KKLEEDILLLEDQNSKLSKERKLL 157
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 998 EENTGETKDEFQQKMVGIDKKQDLEAKNTQTLTadvkdnEIIEQQRKIFSLIQEKNELQQMLESVIaekeqlkTDLKENI 1077
Cdd:pfam01576 158 EERISEFTSNLAEEEEKAKSLSKLKNKHEAMIS------DLEERLKKEEKGRQELEKAKRKLEGES-------TDLQEQI 224
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1078 emtienqEELRLLGDELKKQQEivaqeknhaiKKEGELSRTCDRLAEveeklkeksqqlqeKQQQLLNVQEEMSEMQKKI 1157
Cdd:pfam01576 225 -------AELQAQIAELRAQLA----------KKEEELQAALARLEE--------------ETAQKNNALKKIRELEAQI 273
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1158 NEienLKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKERKVLKELQKSFETERDHLRGYIREIEATGLQTKEEL 1237
Cdd:pfam01576 274 SE---LQEDLESERAARNKAEKQRRDLGEELEALKTELEDTLDTTAAQQELRSKREQEVTELKKALEEETRSHEAQLQEM 350
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1238 KIAHIH-LKEHQETIDELRRsvsektaqiiNTQDLEKSHTKLQEEIPVLHEEQELLPNVKEVSETQETMNELELLTEQST 1316
Cdd:pfam01576 351 RQKHTQaLEELTEQLEQAKR----------NKANLEKAKQALESENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQAR 420
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1317 TKDSttlariEMERLRLNEKFQESQEEIKSLTKERDNL--KTIKEALEVkhDQLKEHIRETLAKIQEsQSKQEQSLNMKE 1394
Cdd:pfam01576 421 LSES------ERQRAELAEKLSKLQSELESVSSLLNEAegKNIKLSKDV--SSLESQLQDTQELLQE-ETRQKLNLSTRL 491
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1395 KDNETTKiVSEMEQFKPKDSALLRIEIEMLGLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLE 1474
Cdd:pfam01576 492 RQLEDER-NSLQEQLEEEEEAKRNVERQLSTLQAQLSDMKKKLEEDAGTLEALEEGKKRLQRELEALTQQLEEKAAAYDK 570
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1475 TEEELKvahcclKEQEEtINELRVNLSEKETEISTIQKQleaindklQNKIQEIYEKEeqfniKQISevqekvnelKQFK 1554
Cdd:pfam01576 571 LEKTKN------RLQQE-LDDLLVDLDHQRQLVSNLEKK--------QKKFDQMLAEE-----KAIS---------ARYA 621
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1555 EHRKAKDSALQSIESKMLELTNRLQESQEeiqimikEKEEMKRVQEALQIERDQLKeNTKEIVAKMKESQEKEYQFLKmT 1634
Cdd:pfam01576 622 EERDRAEAEAREKETRALSLARALEEALE-------AKEELERTNKQLRAEMEDLV-SSKDDVGKNVHELERSKRALE-Q 692
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1635 AVNETQEKMCEIEHLKEQFETQKLNLE-------------------NIETENIRLTQILHENLEEMRSVTKERDDLRSVE 1695
Cdd:pfam01576 693 QVEEMKTQLEELEDELQATEDAKLRLEvnmqalkaqferdlqardeQGEEKRRQLVKQVRELEAELEDERKQRAQAVAAK 772
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1696 ETLKVERDQLKENLRETITRDLEKQEELKIVHMHLKEHQETIDKLRgivsEKTNEISNMQKDLEHSNDALKAQDLKIQEE 1775
Cdd:pfam01576 773 KKLELDLKELEAQIDAANKGREEAVKQLKKLQAQMKDLQRELEEAR----ASRDEILAQSKESEKKLKNLEAELLQLQED 848
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1776 LRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKD---LENSNAKLQEKIQELKANEHQLitlkkdvNETQKK-VSEMEQ 1851
Cdd:pfam01576 849 LAASERARRQAQQERDELADEIASGASGKSALQDEkrrLEARIAQLEEELEEEQSNTELL-------NDRLRKsTLQVEQ 921
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1852 LKKQIKDQSLTLSKLEienlNLAQKLHENLEEMKSVMKERDNlrrveetlkLERDQLKESLQETKARDLEIQQELKTARM 1931
Cdd:pfam01576 922 LTTELAAERSTSQKSE----SARQQLERQNKELKAKLQEMEG---------TVKSKFKSSIAALEAKIAQLEEQLEQESR 988
|
1210 1220 1230 1240 1250 1260 1270 1280
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1932 LSKEHKETVDKLREKISEKTIQISDIQKDLDKSKDELQKkdrQNHQVKPEKRLLSDGQQhltESLREKCSRIKeLLKRYS 2011
Cdd:pfam01576 989 ERQAANKLVRRTEKKLKEVLLQVEDERRHADQYKDQAEK---GNSRMKQLKRQLEEAEE---EASRANAARRK-LQRELD 1061
|
1290
....*....|.
gi 767930923 2012 EMDDHYECLNR 2022
Cdd:pfam01576 1062 DATESNESMNR 1072
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
1040-1567 |
3.15e-04 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 46.27 E-value: 3.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1040 EQQRKIFSLIQEKNELQQM---LESVIAEKEQLKTDLKENIEMTIENQEELRLLGDELKKQQEivaqEKNHAIKKEGELS 1116
Cdd:pfam05557 3 ELIESKARLSQLQNEKKQMeleHKRARIELEKKASALKRQLDRESDRNQELQKRIRLLEKREA----EAEEALREQAELN 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1117 RTCDR-LAEVEEKLKEKSQQlqekqqqllnvQEEMSEMQKKI-NEIENLKNELKNKELTLEHMETERLELAQKLNENYEE 1194
Cdd:pfam05557 79 RLKKKyLEALNKKLNEKESQ-----------LADAREVISCLkNELSELRRQIQRAELELQSTNSELEELQERLDLLKAK 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1195 VKSITKERKVLKELQKSFETERDHLRGYIREIEATGlQTKEELKIAHI-------------HLKEHQETIDELRRSVS-- 1259
Cdd:pfam05557 148 ASEAEQLRQNLEKQQSSLAEAEQRIKELEFEIQSQE-QDSEIVKNSKSelaripelekeleRLREHNKHLNENIENKLll 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1260 --------------EKTAQIINTQDLEKSH--TKLQEEIPVLHEEQELLPNVKEVSETQETMNELEL-LTEQSTTKDSTT 1322
Cdd:pfam05557 227 keevedlkrklereEKYREEAATLELEKEKleQELQSWVKLAQDTGLNLRSPEDLSRRIEQLQQREIvLKEENSSLTSSA 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1323 LA------RIEMERLRLNEKFQESQEEIKS--------------LTKERDNLKTI-----KEALEVKHD-QLKEHIRETL 1376
Cdd:pfam05557 307 RQlekarrELEQELAQYLKKIEDLNKKLKRhkalvrrlqrrvllLTKERDGYRAIlesydKELTMSNYSpQLLERIEEAE 386
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1377 AKIQESQSKQEQSLNMKEKDNETTKIVSEMeqfkpkdSALLRIEIEMLglskRLQESHDEMKSVAKEKDDLQRLQEVLQS 1456
Cdd:pfam05557 387 DMTQKMQAHNEEMEAQLSVAEEELGGYKQQ-------AQTLERELQAL----RQQESLADPSYSKEEVDSLRRKLETLEL 455
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1457 ESDQLKENIKEIvakhleteeELKVAHCCLKEQEETINELRVNLSEKETEISTIQK-----QLEAINDKLQNKIQEIYEK 1531
Cdd:pfam05557 456 ERQRLREQKNEL---------EMELERRCLQGDYDPKKTKVLHLSMNPAAEAYQQRknqleKLQAEIERLKRLLKKLEDD 526
|
570 580 590
....*....|....*....|....*....|....*....
gi 767930923 1532 EEQ---FNIKQISEVQEKVNELKQFKEHRKAKDSALQSI 1567
Cdd:pfam05557 527 LEQvlrLPETTSTMNFKEVLDLRKELESAELKNQRLKEV 565
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
1278-1630 |
3.19e-04 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 46.27 E-value: 3.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1278 LQEEIPVLHEEQELLPNVKEVSETQETMNELELLTEQSTTKDSTTLARIE-MERLRLNEKFQESQEEIKSLTKERDNLKT 1356
Cdd:pfam17380 245 LAEDVTTMTPEYTVRYNGQTMTENEFLNQLLHIVQHQKAVSERQQQEKFEkMEQERLRQEKEEKAREVERRRKLEEAEKA 324
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1357 IKEALEVKHDQLKEHIRETLAKIQESQSKQEQSLNMKEKDNETTKIVSEMEQFKpkdsALLRIEIEMLGLSKRLQESHDE 1436
Cdd:pfam17380 325 RQAEMDRQAAIYAEQERMAMERERELERIRQEERKRELERIRQEEIAMEISRMR----ELERLQMERQQKNERVRQELEA 400
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1437 MKSVAKEKDDLQRLQEVLQSESDQLK---ENIKEIVAKHLETEEElkvahcclKEQEetinelRVNLSEKETeistiQKQ 1513
Cdd:pfam17380 401 ARKVKILEEERQRKIQQQKVEMEQIRaeqEEARQREVRRLEEERA--------REME------RVRLEEQER-----QQQ 461
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1514 LEAINDKLQNKIQEIYEKEEQFNIKQISEVQEKVNELKQFKEHRKA---KDSALQSIESKMLELTNRLQESQ-----EEI 1585
Cdd:pfam17380 462 VERLRQQEEERKRKKLELEKEKRDRKRAEEQRRKILEKELEERKQAmieEERKRKLLEKEMEERQKAIYEEErrreaEEE 541
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 767930923 1586 QIMIKEKEEMKRVQEALQI---ERDQLK--ENTKEIVAKMKESQEKEYQF 1630
Cdd:pfam17380 542 RRKQQEMEERRRIQEQMRKateERSRLEamEREREMMRQIVESEKARAEY 591
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
935-1545 |
3.54e-04 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 46.05 E-value: 3.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 935 KQLQESLQIER-----DQLKsDIHDTVNMNIDTQEQLRNALESlkqHQETINTLKSKISEEVSRNLHMEENTGETKDEFQ 1009
Cdd:PRK01156 153 KILDEILEINSlernyDKLK-DVIDMLRAEISNIDYLEEKLKS---SNLELENIKKQIADDEKSHSITLKEIERLSIEYN 228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1010 QKMVGIDK-KQDLEAKNTQTLTADVKDNEIIEQQRKIFSLIQEKNELQQMLESViaeKEQLKTDLKENIEMTIENQEELR 1088
Cdd:PRK01156 229 NAMDDYNNlKSALNELSSLEDMKNRYESEIKTAESDLSMELEKNNYYKELEERH---MKIINDPVYKNRNYINDYFKYKN 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1089 LLGDELKKQQEIVAQeknhaIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELK 1168
Cdd:PRK01156 306 DIENKKQILSNIDAE-----INKYHAIIKKLSVLQKDYNDYIKKKSRYDDLNNQILELEGYEMDYNSYLKSIESLKKKIE 380
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1169 NKELTLEHMETERLELAQKLNENYEEVKSITKE-RKVLKELQ---KSFETERDHLRGYIREIE--ATGLQTKEELKIAHI 1242
Cdd:PRK01156 381 EYSKNIERMSAFISEILKIQEIDPDAIKKELNEiNVKLQDISskvSSLNQRIRALRENLDELSrnMEMLNGQSVCPVCGT 460
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1243 HLKEhqETIDELRRSVSEKTAQIINTQD-LEKSHTKLQEEIPVLHEEQELLpNVKEVSETQETMNELELLtEQSTTKDST 1321
Cdd:PRK01156 461 TLGE--EKSNHIINHYNEKKSRLEEKIReIEIEVKDIDEKIVDLKKRKEYL-ESEEINKSINEYNKIESA-RADLEDIKI 536
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1322 TLARIEMERLrlneKFQESQEEIKSLTKERDNLKtikealevKHDQLKEHIRETLAKIQESQS-KQEQSLNMKEKDNETT 1400
Cdd:PRK01156 537 KINELKDKHD----KYEEIKNRYKSLKLEDLDSK--------RTSWLNALAVISLIDIETNRSrSNEIKKQLNDLESRLQ 604
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1401 KIVSEMEQFKP-KDSALLRIEIEMLGLSKRLQESHDEMKSVAKEKDDLQRLQEVLqSESDQLKENIKEIVAKHLETEEEl 1479
Cdd:PRK01156 605 EIEIGFPDDKSyIDKSIREIENEANNLNNKYNEIQENKILIEKLRGKIDNYKKQI-AEIDSIIPDLKEITSRINDIEDN- 682
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 767930923 1480 kvahccLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLqNKIQEIYEKEEQFnIKQISEVQE 1545
Cdd:PRK01156 683 ------LKKSRKALDDAKANRARLESTIEILRTRINELSDRI-NDINETLESMKKI-KKAIGDLKR 740
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
720-1321 |
4.08e-04 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 45.80 E-value: 4.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 720 GKITDLQKELNKEVEENEALREEVILLSELKSLPSEVERLRKEIQDKSEELHIITSEKDKLfSEVV--HKESRvqgllEE 797
Cdd:PRK02224 179 ERVLSDQRGSLDQLKAQIEEKEEKDLHERLNGLESELAELDEEIERYEEQREQARETRDEA-DEVLeeHEERR-----EE 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 798 IGKTKDDLATTQSNYKSTDQEFQNFKTLHMDFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQE 877
Cdd:PRK02224 253 LETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEE 332
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 878 KTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDqlksdihdtvn 957
Cdd:PRK02224 333 CRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFG----------- 401
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 958 mniDTQEQLRNALESLKQHQETINTLKSKISeEVSRNLHMEENTGETKDEFqqkmvgidkkqdLEAKNTQTLTADVKDNE 1037
Cdd:PRK02224 402 ---DAPVDLGNAEDFLEELREERDELREREA-ELEATLRTARERVEEAEAL------------LEAGKCPECGQPVEGSP 465
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1038 I---IEQQRkifsliQEKNELQQMLESVIAEKEQLKTDLkENIEMTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGE 1114
Cdd:PRK02224 466 HvetIEEDR------ERVEELEAELEDLEEEVEEVEERL-ERAEDLVEAEDRIERLEERREDLEELIAERRETIEEKRER 538
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1115 LSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELknkeltlehmetERLELAQKLNENYEE 1194
Cdd:PRK02224 539 AEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESL------------ERIRTLLAAIADAED 606
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1195 vkSITKERKVLKELQKSFETERDHL---RGYIREIEATGLQTK-EELKIAHIHLKEHQETIDElrrsvsektaqiiNTQD 1270
Cdd:PRK02224 607 --EIERLREKREALAELNDERRERLaekRERKRELEAEFDEARiEEAREDKERAEEYLEQVEE-------------KLDE 671
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|..
gi 767930923 1271 LEKSHTKLQEEIPVLHEEQELLPNVKEVSET-QETMNELELLTEQSTTKDST 1321
Cdd:PRK02224 672 LREERDDLQAEIGAVENELEELEELRERREAlENRVEALEALYDEAEELESM 723
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1810-2384 |
4.40e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 45.83 E-value: 4.40e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1810 DLENSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQLKKQIKDQSLTLSKLEIENLNLAQKLHENLEEMKSVMK 1889
Cdd:PRK03918 159 DYENAYKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKE 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1890 ERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELktarmlsKEHKETVDKLrEKISEKTIQISDIQKDLDKSKDELQ 1969
Cdd:PRK03918 239 EIEELEKELESLEGSKRKLEEKIRELEERIEELKKEI-------EELEEKVKEL-KELKEKAEEYIKLSEFYEEYLDELR 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1970 KKDRQNHQVKPEKRllsdGQQHLTESLREKCSRIKELLKRYSEMDDHYECLNRLSLDLEKEIEFQKELSmRVKANLSLpy 2049
Cdd:PRK03918 311 EIEKRLSRLEEEIN----GIEERIKELEEKEERLEELKKKLKELEKRLEELEERHELYEEAKAKKEELE-RLKKRLTG-- 383
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2050 LQTKHIEKLFTANQRCSMEFHRIMKKLKYVLSYVTKIKEEQHESINKFE----------------------MDFIDEVEK 2107
Cdd:PRK03918 384 LTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKkakgkcpvcgrelteehrkellEEYTAELKR 463
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2108 QKELLIKIQHLQQDCDVPSRELRDLKLNQNMDLHIEEILKDFSESEFPSIKTEFQQVLSNRKEMTQFLEEWLNTRFDIEK 2187
Cdd:PRK03918 464 IEKELKEIEEKERKLRKELRELEKVLKKESELIKLKELAEQLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEIKS 543
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2188 LKNGIQKENDricqvnnfFNNRIIAIMNESTEFEERSATISKEWE-------QDLKSLKEKNEKLFKNYQTLKTSLASGA 2260
Cdd:PRK03918 544 LKKELEKLEE--------LKKKLAELEKKLDELEEELAELLKELEelgfesvEELEERLKELEPFYNEYLELKDAEKELE 615
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2261 QVNPTTQDNKNPHVTSRAT-QLTTEKIRELENSLHEAKESAMHKESKiiKMQKELEVTNDIIAKLQAKVHESNKCLEKTK 2339
Cdd:PRK03918 616 REEKELKKLEEELDKAFEElAETEKRLEELRKELEELEKKYSEEEYE--ELREEYLELSRELAGLRAELEELEKRREEIK 693
|
570 580 590 600
....*....|....*....|....*....|....*....|....*..
gi 767930923 2340 ETIQVLQDKVAlGAKPYKEEIEDLKMKLVKID--LEKMKNAKEFEKE 2384
Cdd:PRK03918 694 KTLEKLKEELE-EREKAKKELEKLEKALERVEelREKVKKYKALLKE 739
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
895-1118 |
4.50e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 45.21 E-value: 4.50e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 895 QLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIhDTVNMNIDT-QEQLRNALESL 973
Cdd:COG3883 17 QIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEI-AEAEAEIEErREELGERARAL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 974 KQHQETINTLKSKISeevSRNLhmeentgetkDEFQQKMVGIDKKQDLEAKNTQTLTADVKDNEiieqqrkifsliQEKN 1053
Cdd:COG3883 96 YRSGGSVSYLDVLLG---SESF----------SDFLDRLSALSKIADADADLLEELKADKAELE------------AKKA 150
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 767930923 1054 ELQQMLESVIAEKEQLKTDLKENIEMTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRT 1118
Cdd:COG3883 151 ELEAKLAELEALKAELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAA 215
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
1462-2178 |
4.59e-04 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 45.73 E-value: 4.59e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1462 KENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNK--IQEIYEKEEQFNIKQ 1539
Cdd:TIGR00618 186 FAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYLTQKreAQEEQLKKQQLLKQL 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1540 ISEVQEKVNELKQFKEHRKAKDSA-----LQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTK 1614
Cdd:TIGR00618 266 RARIEELRAQEAVLEETQERINRArkaapLAAHIKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRR 345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1615 EIVAKMKESQEKEYQFLKMTAVNETQEKMCEIEHLKEQFETQKLNLENIETENIRLTQILHENLEEMRSVTKERDDLRSv 1694
Cdd:TIGR00618 346 LLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKELDILQREQATIDTRTSAFRDLQG- 424
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1695 eeTLKVERDQLKENLRETITRDLEKQEELKIVHMHLKEHQETIDKLRgivsEKTNEISNMQKDLEHSNDAlKAQDLKIQE 1774
Cdd:TIGR00618 425 --QLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLK----EREQQLQTKEQIHLQETRK-KAVVLARLL 497
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1775 ELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKdLENSNAKLQEKIQELkanEHQLITLKKDVNETQKKVSEMEQ--L 1852
Cdd:TIGR00618 498 ELQEEPCPLCGSCIHPNPARQDIDNPGPLTRRMQR-GEQTYAQLETSEEDV---YHQLTSERKQRASLKEQMQEIQQsfS 573
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1853 KKQIKDQSLTlskleiENLNLAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELktARML 1932
Cdd:TIGR00618 574 ILTQCDNRSK------EDIPNLQNITVRLQDLTEKLSEAEDMLACEQHALLRKLQPEQDLQDVRLHLQQCSQEL--ALKL 645
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1933 SKEHKETVDKLREKISEKTIQISDIQKDLDKSKD-ELQKKDRQNHQVKPEKrllsdgqqhltESLREKCSRIKELLKRYS 2011
Cdd:TIGR00618 646 TALHALQLTLTQERVREHALSIRVLPKELLASRQlALQKMQSEKEQLTYWK-----------EMLAQCQTLLRELETHIE 714
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2012 EMDDHYECLNRLSLDLEKEIEFQKELsmrvkANLSLPYLQTKHIEKLftanqrCSMEFHRIMKKLKYVLSYVTKIKEEQH 2091
Cdd:TIGR00618 715 EYDREFNEIENASSSLGSDLAAREDA-----LNQSLKELMHQARTVL------KARTEAHFNNNEEVTAALQTGAELSHL 783
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 2092 ESINKFEMDFIDEVEKQKELLIKIQHLQQDCDVPSRELRDLKLNQ---NMDLHIEEILKDFSE-----SEFPSIKTEFQQ 2163
Cdd:TIGR00618 784 AAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQeeeQFLSRLEEKSATLGEithqlLKYEECSKQLAQ 863
|
730
....*....|....*
gi 767930923 2164 VLSNRKEMTQFLEEW 2178
Cdd:TIGR00618 864 LTQEQAKIIQLSDKL 878
|
|
| Spc7 |
smart00787 |
Spc7 kinetochore protein; This domain is found in cell division proteins which are required ... |
1425-1554 |
4.81e-04 |
|
Spc7 kinetochore protein; This domain is found in cell division proteins which are required for kinetochore-spindle association.
Pssm-ID: 197874 [Multi-domain] Cd Length: 312 Bit Score: 45.01 E-value: 4.81e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1425 GLSKRLQESHDEMKS-----------VAKEKDDLQRLQEVLQSESDQLKENIKEIVAKhleTEEELKVAHCCLKEQEETI 1493
Cdd:smart00787 144 GLKEGLDENLEGLKEdykllmkelelLNSIKPKLRDRKDALEEELRQLKQLEDELEDC---DPTELDRAKEKLKKLLQEI 220
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 767930923 1494 NELRVNLSEKETEISTIQKQLEAINDKLQ------NKIQEIYEKEEQFNIKQISEVQEKVNELKQFK 1554
Cdd:smart00787 221 MIKVKKLEELEEELQELESKIEDLTNKKSelnteiAEAEKKLEQCRGFTFKEIEKLKEQLKLLQSLT 287
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
916-1651 |
5.64e-04 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 45.45 E-value: 5.64e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 916 KLQQTLEEVKTLTQEKDDLKQLQESlqierdqlksDIHDTVNMNIDTQEQLRNAL--ESLKQHQETINTLKSKISEEVSR 993
Cdd:COG5022 763 RYLQALKRIKKIQVIQHGFRLRRLV----------DYELKWRLFIKLQPLLSLLGsrKEYRSYLACIIKLQKTIKREKKL 832
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 994 NLHMEENTGETKDEFQQKMVgidkkqdlEAKNTQTLTADVKDNEIIEQQRKIFSLIQEK-NELQQMLESVIAEKEQLKTD 1072
Cdd:COG5022 833 RETEEVEFSLKAEVLIQKFG--------RSLKAKKRFSLLKKETIYLQSAQRVELAERQlQELKIDVKSISSLKLVNLEL 904
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1073 LKENIEMTIENQEELRLlgdELKKQQEIVAQEKNHAIKKEGELSRTCDRlaeveEKLKEKsqqlqekqqqlLNVQEEMSE 1152
Cdd:COG5022 905 ESEIIELKKSLSSDLIE---NLEFKTELIARLKKLLNNIDLEEGPSIEY-----VKLPEL-----------NKLHEVESK 965
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1153 MQKKINEIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKERKVLKElqksfeterdhlrgyiREIEATGLQ 1232
Cdd:COG5022 966 LKETSEEYEDLLKKSTILVREGNKANSELKNFKKELAELSKQYGALQESTKQLKE----------------LPVEVAELQ 1029
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1233 TkEELKIAHIHLKEHQET-IDELRRsvsektaqiintqDLEKSHTKLQEEIPVLHEEQELLPNVKEVSETQET----MNE 1307
Cdd:COG5022 1030 S-ASKIISSESTELSILKpLQKLKG-------------LLLLENNQLQARYKALKLRRENSLLDDKQLYQLEStenlLKT 1095
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1308 LELLTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLK-----EHIRETLAKIQES 1382
Cdd:COG5022 1096 INVKDLEVTNRNLVKPANVLQFIVAQMIKLNLLQEISKFLSQLVNTLEPVFQKLSVLQLELDglfweANLEALPSPPPFA 1175
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1383 QSKQEQSLNMKEKDNETTKIVSEMEQFKPKDSALLRIEIEMLGLSKRLQEShdemksvAKEKDDLQRLQEVLQSESDQLK 1462
Cdd:COG5022 1176 ALSEKRLYQSALYDEKSKLSSSEVNDLKNELIALFSKIFSGWPRGDKLKKL-------ISEGWVPTEYSTSLKGFNNLNK 1248
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1463 ENIKEIVAKHLETEEELKVAHCCLKEQEEtinelrvnlsEKETEISTIQKQLEAINDKLQNkiqEIYEKEEQFNIKQISE 1542
Cdd:COG5022 1249 KFDTPASMSNEKLLSLLNSIDNLLSSYKL----------EEEVLPATINSLLQYINVGLFN---ALRTKASSLRWKSATE 1315
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1543 VQEKVNELKQFKEHRKAKDSALQSIEskmleltnrLQESQEEIQIMIKEKEEMKRV----QEALQIERDQLKEN------ 1612
Cdd:COG5022 1316 VNYNSEELDDWCREFEISDVDEELEE---------LIQAVKVLQLLKDDLNKLDELldacYSLNPAEIQNLKSRydpadk 1386
|
730 740 750 760
....*....|....*....|....*....|....*....|...
gi 767930923 1613 ----TKEIVAKMKESQEKEYQFLKMTAVNETQEKMCEIEHLKE 1651
Cdd:COG5022 1387 ennlPKEILKKIEALLIKQELQLSLEGKDETEVHLSEIFSEEK 1429
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
790-1228 |
5.74e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 45.72 E-value: 5.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 790 RVQGLLEEIGKTKDDLATTQSNYkstdQEFQNFKTLHMDFEQKYKMVLEENERMNQEIVnLSKEAQKFdSSLGALKTElS 869
Cdd:PRK04863 234 DMEAALRENRMTLEAIRVTQSDR----DLFKHLITESTNYVAADYMRHANERRVHLEEA-LELRRELY-TSRRQLAAE-Q 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 870 YKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLI----------TEKLQQTLEEVKTLTQEKDDLKQLQE 939
Cdd:PRK04863 307 YRLVEMARELAELNEAESDLEQDYQAASDHLNLVQTALRQQEKIeryqadleelEERLEEQNEVVEEADEQQEENEARAE 386
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 940 SLQIERDQLKSDIHDtVNMNIDTQE----QLRNALESLKQHQE-------TINTLKSKISEEVSRnlhmEENTGETKDEF 1008
Cdd:PRK04863 387 AAEEEVDELKSQLAD-YQQALDVQQtraiQYQQAVQALERAKQlcglpdlTADNAEDWLEEFQAK----EQEATEELLSL 461
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1009 QQKMVGIDKKQDLEAKNTQTLTADVKDNEIIEQQRKIFSLIQEKNELQQMLESViaekEQLKTDLKEnIEMTIENQEELR 1088
Cdd:PRK04863 462 EQKLSVAQAAHSQFEQAYQLVRKIAGEVSRSEAWDVARELLRRLREQRHLAEQL----QQLRMRLSE-LEQRLRQQQRAE 536
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1089 LLGDELKKQqeivaqeknhaikkegeLSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELK 1168
Cdd:PRK04863 537 RLLAEFCKR-----------------LGKNLDDEDELEQLQEELEARLESLSESVSEARERRMALRQQLEQLQARIQRLA 599
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 767930923 1169 NKElTLEHMETERLE-LAQKLNENYEEVKSITKERKVLKELQKSFETERDHLRGYIREIEA 1228
Cdd:PRK04863 600 ARA-PAWLAAQDALArLREQSGEEFEDSQDVTEYMQQLLERERELTVERDELAARKQALDE 659
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1490-1657 |
5.99e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 44.82 E-value: 5.99e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1490 EETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQFNI--KQISEVQEKVNEL-KQFKEHRKAKDSALQS 1566
Cdd:COG3883 15 DPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEAlqAEIDKLQAEIAEAeAEIEERREELGERARA 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1567 I--------------ESKM-------LELTNRLQESQ-EEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKMK--E 1622
Cdd:COG3883 95 LyrsggsvsyldvllGSESfsdfldrLSALSKIADADaDLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAelE 174
|
170 180 190
....*....|....*....|....*....|....*
gi 767930923 1623 SQEKEYQFLKMTAVNETQEKMCEIEHLKEQFETQK 1657
Cdd:COG3883 175 AQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAE 209
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
1783-1991 |
6.19e-04 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 45.45 E-value: 6.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1783 LKEQQETIDKLRGIV----SEKTDKLSNMQKDLENSNAKLQEKiQELKANEHQLITLKKDVNETQKKVSEMEQLKKQIKD 1858
Cdd:COG5022 832 LRETEEVEFSLKAEVliqkFGRSLKAKKRFSLLKKETIYLQSA-QRVELAERQLQELKIDVKSISSLKLVNLELESEIIE 910
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1859 QSLTLSKLEIENLNLAQKLHENLEEMK--------------------SVMKERDNLRRVEETLKLERDQLKESLQETKAR 1918
Cdd:COG5022 911 LKKSLSSDLIENLEFKTELIARLKKLLnnidleegpsieyvklpelnKLHEVESKLKETSEEYEDLLKKSTILVREGNKA 990
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 767930923 1919 DLEIQQELKTARMLSKEHKETVDKLREkISEKTIQISDIQKDLDKSKDELQKKDRQNHQVKPEKRLLSDGQQH 1991
Cdd:COG5022 991 NSELKNFKKELAELSKQYGALQESTKQ-LKELPVEVAELQSASKIISSESTELSILKPLQKLKGLLLLENNQL 1062
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
503-990 |
6.74e-04 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 45.10 E-value: 6.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 503 LRADYDNLVLDYEQLRTEKE--EMELKLKEKNDLDEFEALERKTKKdqemqlihEISNLKNLVKHAEVYNQDLENELSSK 580
Cdd:pfam05483 188 LNNNIEKMILAFEELRVQAEnaRLEMHFKLKEDHEKIQHLEEEYKK--------EINDKEKQVSLLLIQITEKENKMKDL 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 581 VELLREKEDQIKKLQEYIDSQKlENIKmdlsyslESIEDPKQMKQTLFDaetvaldakresaflrsenleLKEKMKELAT 660
Cdd:pfam05483 260 TFLLEESRDKANQLEEKTKLQD-ENLK-------ELIEKKDHLTKELED---------------------IKMSLQRSMS 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 661 TYKQMENDIQLyqsqlEAKKKMQVDLEKELQSAFNEITKLTSLIDGKVPKDLLCNLElegkitDLQKELNKEVEENEalR 740
Cdd:pfam05483 311 TQKALEEDLQI-----ATKTICQLTEEKEAQMEELNKAKAAHSFVVTEFEATTCSLE------ELLRTEQQRLEKNE--D 377
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 741 EEVILLSELKSLPSEVERLRKEIQDKS---EELHIITSEKDKLFSEvvhkESRVQGLLEEIGKTKDDLA----TTQSNYK 813
Cdd:pfam05483 378 QLKIITMELQKKSSELEEMTKFKNNKEvelEELKKILAEDEKLLDE----KKQFEKIAEELKGKEQELIfllqAREKEIH 453
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 814 STDQEFQNFKTLHMDFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLK 893
Cdd:pfam05483 454 DLEIQLTAIKTSEEHYLKEVEDLKTELEKEKLKNIELTAHCDKLLLENKELTQEASDMTLELKKHQEDIINCKKQEERML 533
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 894 EQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIHDTVNmniDTQEQLRNALESL 973
Cdd:pfam05483 534 KQIENLEEKEMNLRDELESVREEFIQKGDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCN---NLKKQIENKNKNI 610
|
490
....*....|....*..
gi 767930923 974 KQHQETINTLKSKISEE 990
Cdd:pfam05483 611 EELHQENKALKKKGSAE 627
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
470-1101 |
7.82e-04 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 45.03 E-value: 7.82e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 470 DVFSNTLDTLSEIEWNPATKllNQENIESELNSLRADYDNLVLDYEQLRTEKEEMELKLKEKNdldefEALERKTKKDQE 549
Cdd:PRK02224 180 RVLSDQRGSLDQLKAQIEEK--EEKDLHERLNGLESELAELDEEIERYEEQREQARETRDEAD-----EVLEEHEERREE 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 550 MQ-LIHEISNLKNLVKHAEVYNQDLENELSSKVELLREKEDQIKKLQ-----EYIDSQKLENIKMDLSYSLESIEDPKQM 623
Cdd:PRK02224 253 LEtLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLaeaglDDADAEAVEARREELEDRDEELRDRLEE 332
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 624 KQTLFDAETVALDAKRESAF-LRSENLELKEKMKELATTYKQMENDIQLYQSQLEAKKKMQVDLEKELQSAFNEITKLTS 702
Cdd:PRK02224 333 CRVAAQAHNEEAESLREDADdLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAED 412
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 703 LIDgkvpkDLLCNL-ELEGKITDLQ---KELNKEVEENEALREEvillselkslpsevERLRKEIQDKSEELHIITSEKD 778
Cdd:PRK02224 413 FLE-----ELREERdELREREAELEatlRTARERVEEAEALLEA--------------GKCPECGQPVEGSPHVETIEED 473
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 779 KlfsevvhkesrvqgllEEIGKTKDDLATTQsnykstdqefqnfktlhmdfeqkykmvlEENERMNQEIvNLSKEAQKFD 858
Cdd:PRK02224 474 R----------------ERVEELEAELEDLE----------------------------EEVEEVEERL-ERAEDLVEAE 508
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 859 SSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQ 938
Cdd:PRK02224 509 DRIERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERI 588
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 939 ESLQIERDQLksdihdtvnmniDTQEQLRNALESLKQHQETINtlkskiseevsrnlhmEENTgETKDEFQQKMvgiDKK 1018
Cdd:PRK02224 589 ESLERIRTLL------------AAIADAEDEIERLREKREALA----------------ELND-ERRERLAEKR---ERK 636
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1019 QDLEAKntqtltadvKDNEIIEQQRkifsliQEKNELQQMLESV---IAEKEQLKTDLKENIEMTIENQEELRLLGDELK 1095
Cdd:PRK02224 637 RELEAE---------FDEARIEEAR------EDKERAEEYLEQVeekLDELREERDDLQAEIGAVENELEELEELRERRE 701
|
....*.
gi 767930923 1096 KQQEIV 1101
Cdd:PRK02224 702 ALENRV 707
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1790-1949 |
8.69e-04 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 43.37 E-value: 8.69e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1790 IDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQLKKQIKD--QSLTLSKlE 1867
Cdd:COG1579 19 LDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNnkEYEALQK-E 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1868 IENLNLAQKLHEnlEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKTARmlsKEHKETVDKLREKI 1947
Cdd:COG1579 98 IESLKRRISDLE--DEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAEL---EELEAEREELAAKI 172
|
..
gi 767930923 1948 SE 1949
Cdd:COG1579 173 PP 174
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
737-1229 |
9.16e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 44.91 E-value: 9.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 737 EALREEVILLSELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVhkESRVQGLLEEIGKTKDDLATTQSNYKSTD 816
Cdd:COG4913 245 EDAREQIELLEPIRELAERYAAARERLAELEYLRAALRLWFAQRRLELL--EAELEELRAELARLEAELERLEARLDALR 322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 817 QEFQNFKTLHMDFEQKYKMVLE-ENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQ 895
Cdd:COG4913 323 EELDELEAQIRGNGGDRLEQLErEIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEALEEELEA 402
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 896 LENRDSTLQTverektliteKLQQTLEEVKTLTQEKDDLKQLQ-----ESLQIeRDQLKSDI-HDTVNMNI--------D 961
Cdd:COG4913 403 LEEALAEAEA----------ALRDLRRELRELEAEIASLERRKsnipaRLLAL-RDALAEALgLDEAELPFvgelievrP 471
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 962 TQEQLRNALESL---------------KQHQETINTLKSK---ISEEVSRNLHMEENTGETKDEFQQKMVGIDKK----- 1018
Cdd:COG4913 472 EEERWRGAIERVlggfaltllvppehyAAALRWVNRLHLRgrlVYERVRTGLPDPERPRLDPDSLAGKLDFKPHPfrawl 551
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1019 -------------QDLEA-KNTQ---TLTADVKDN----------EIIEQ-------QRKIFSLIQEKNELQQMLESVIA 1064
Cdd:COG4913 552 eaelgrrfdyvcvDSPEElRRHPraiTRAGQVKGNgtrhekddrrRIRSRyvlgfdnRAKLAALEAELAELEEELAEAEE 631
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1065 EKEQLKTDLKENiemtienQEELRLLGDELKKQQEIV----AQEKNHAIKKE-GELSRTCDRLAEVEEKLKEKSQQLQEK 1139
Cdd:COG4913 632 RLEALEAELDAL-------QERREALQRLAEYSWDEIdvasAEREIAELEAElERLDASSDDLAALEEQLEELEAELEEL 704
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1140 QQQLLNVQEEMSEMQKKINEIENLKNELKNKELTLEhmETERLELAQKLNENYEEVKSITKERKVLKELQKSFETERDHL 1219
Cdd:COG4913 705 EEELDELKGEIGRLEKELEQAEEELDELQDRLEAAE--DLARLELRALLEERFAAALGDAVERELRENLEERIDALRARL 782
|
570
....*....|
gi 767930923 1220 RGYIREIEAT 1229
Cdd:COG4913 783 NRAEEELERA 792
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
346-798 |
9.33e-04 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 44.72 E-value: 9.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 346 KRYRKEIMDLKKQLEEVSLETRAQAMEKDQLAQ-----------LL-----EEKDL-LQKVQNEK-----------IENL 397
Cdd:pfam15921 338 RMYEDKIEELEKQLVLANSELTEARTERDQFSQesgnlddqlqkLLadlhkREKELsLEKEQNKRlwdrdtgnsitIDHL 417
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 398 TRMLVTSSSLTlqQELKAKRKRRVTWCLGKINKMKNSNYADQFNIpTNITTKTHKL--SINLLREIDESVCSESDVFSNT 475
Cdd:pfam15921 418 RRELDDRNMEV--QRLEALLKAMKSECQGQMERQMAAIQGKNESL-EKVSSLTAQLesTKEMLRKVVEELTAKKMTLESS 494
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 476 LDTLSEIEWNPATKLLNQENIESELNSLRADYDNLVLDYEQLRTEKEEMelklkeKNDLDEFEALE-RKTKKDQEMQLI- 553
Cdd:pfam15921 495 ERTVSDLTASLQEKERAIEATNAEITKLRSRVDLKLQELQHLKNEGDHL------RNVQTECEALKlQMAEKDKVIEILr 568
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 554 HEISNLKNLVKH-------AEVYNQDLENELSSK------VELLREKED-QIKKLQEYIDSQKLENIKM--DLSYSLESI 617
Cdd:pfam15921 569 QQIENMTQLVGQhgrtagaMQVEKAQLEKEINDRrlelqeFKILKDKKDaKIRELEARVSDLELEKVKLvnAGSERLRAV 648
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 618 EDPKQMK-QTLFDAETVALDAKRESAFLRSENLELKEKMKELATTYKQMENDIQLYQSQLEAKKKMQVDLEKElqsafne 696
Cdd:pfam15921 649 KDIKQERdQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELEQTRNTLKSMEGS------- 721
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 697 itkltsliDGKVPKDLLcnlelegkitDLQKELNKEVEENEALREEVILLSELKSLPSEVERLRKEIQDK-SEELHIITS 775
Cdd:pfam15921 722 --------DGHAMKVAM----------GMQKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKlSQELSTVAT 783
|
490 500
....*....|....*....|...
gi 767930923 776 EKDKLFSEVVHKESRVQGLLEEI 798
Cdd:pfam15921 784 EKNKMAGELEVLRSQERRLKEKV 806
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1701-1917 |
9.72e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 44.05 E-value: 9.72e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1701 ERDQLKENLRETITRDLEKQEELKIVHMHLKEHQETIDKLRGIVSEKTNEISNMQKDLEHSNDALKAQDLKIQEELRiah 1780
Cdd:COG3883 17 QIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERAR--- 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1781 mHLKEQQETIDKLRGIVSEKT-----DKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQLKKQ 1855
Cdd:COG3883 94 -ALYRSGGSVSYLDVLLGSESfsdflDRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAE 172
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 767930923 1856 IKDQsltLSKLEIENLNLAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKA 1917
Cdd:COG3883 173 LEAQ---QAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAA 231
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1050-1290 |
9.87e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.98 E-value: 9.87e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1050 QEKNELQQMLESVIAEKEQLKTDLKENIEMTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKL 1129
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1130 KEKsqqlqekqqqLLNVQEEMSEMQkKINEIENLKNELKNKEltLEHMETERLELAQKLNENYEEVKSITKERKVLKELQ 1209
Cdd:COG4942 100 EAQ----------KEELAELLRALY-RLGRQPPLALLLSPED--FLDAVRRLQYLKYLAPARREQAEELRADLAELAALR 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1210 KSFETERDHLRGYIREIEatglQTKEELKIAhihLKEHQETIDELRRSVSEKTAQIintQDLEKSHTKLQEEIPVLHEEQ 1289
Cdd:COG4942 167 AELEAERAELEALLAELE----EERAALEAL---KAERQKLLARLEKELAELAAEL---AELQQEAEELEALIARLEAEA 236
|
.
gi 767930923 1290 E 1290
Cdd:COG4942 237 A 237
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
737-992 |
9.99e-04 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 44.50 E-value: 9.99e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 737 EALREEVILLSELKSLPSEVERLRKEIQDKSEELHIITSEKdklfsevvhkESRVQGLLEEIGKTKDDlattqsnykstd 816
Cdd:pfam07888 38 ECLQERAELLQAQEAANRQREKEKERYKRDREQWERQRREL----------ESRVAELKEELRQSREK------------ 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 817 qefqnfktlHMDFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKtelsyktQELQEKTREVQERLNEMEQLKEQL 896
Cdd:pfam07888 96 ---------HEELEEKYKELSASSEELSEEKDALLAQRAAHEARIRELE-------EDIKTLTQRVLERETELERMKERA 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 897 ENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDI----------HDTVNMNIDTQEQL 966
Cdd:pfam07888 160 KKAGAQRKEEEAERKQLQAKLQQTEEELRSLSKEFQELRNSLAQRDTQVLQLQDTIttltqklttaHRKEAENEALLEEL 239
|
250 260
....*....|....*....|....*.
gi 767930923 967 RNALESLKQHQETINTLKSKISEEVS 992
Cdd:pfam07888 240 RSLQERLNASERKVEGLGEELSSMAA 265
|
|
| HEC1 |
COG5185 |
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell ... |
1406-1838 |
1.03e-03 |
|
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 444066 [Multi-domain] Cd Length: 594 Bit Score: 44.56 E-value: 1.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1406 MEQFKPKDSALLRIEIEMLGLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCC 1485
Cdd:COG5185 88 FLKEKKLDTKILQEYVNSLIKLPNYEWSADILISLLYLYKSEIVALKDELIKVEKLDEIADIEASYGEVETGIIKDIFGK 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1486 LKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQFNiKQISEVQEKVNELKQFKEHRKAKDSALQ 1565
Cdd:COG5185 168 LTQELNQNLKKLEIFGLTLGLLKGISELKKAEPSGTVNSIKESETGNLGSE-STLLEKAKEIINIEEALKGFQDPESELE 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1566 SIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKMKESQEKEYQFLKMTAVNETQEKMCE 1645
Cdd:COG5185 247 DLAQTSDKLEKLVEQNTDLRLEKLGENAESSKRLNENANNLIKQFENTKEKIAEYTKSIDIKKATESLEEQLAAAEAEQE 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1646 IEHLKEQFETQKLNL-ENIETENIRLTQILHENLEEMRSVTKERdDLRSVEETLKVERDQLKENLRE--TITRDLEK--Q 1720
Cdd:COG5185 327 LEESKRETETGIQNLtAEIEQGQESLTENLEAIKEEIENIVGEV-ELSKSSEELDSFKDTIESTKESldEIPQNQRGyaQ 405
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1721 EELKIVHMHLKEHQETIDKLRGIVSEKTNEISNMQKDLEHSNDALKAQDLKIQEELRI-----AHMHLKEQQETIDKLRG 1795
Cdd:COG5185 406 EILATLEDTLKAADRQIEELQRQIEQATSSNEEVSKLLNELISELNKVMREADEESQSrleeaYDEINRSVRSKKEDLNE 485
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 767930923 1796 IVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKD 1838
Cdd:COG5185 486 ELTQIESRVSTLKATLEKLRAKLERQLEGVRSKLDQVAESLKD 528
|
|
| EzrA |
pfam06160 |
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like ... |
1670-1970 |
1.12e-03 |
|
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerizes into a ring structure that establishes the location of the nascent division site. EzrA modulates the frequency and position of FtsZ ring formation. The structure contains 5 spectrin like alpha helical repeats.
Pssm-ID: 428797 [Multi-domain] Cd Length: 542 Bit Score: 44.07 E-value: 1.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1670 LTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETITRDLEKQEELkivhmhlkehQETIDKLrgivsekTN 1749
Cdd:pfam06160 91 IEELLDDIEEDIKQILEELDELLESEEKNREEVEELKDKYRELRKTLLANRFSY----------GPAIDEL-------EK 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1750 EISNMQKDLEHSNDALKAQDLkiqEElriAHMHLKEQQETIDKLRgivsEKTDKLSNMQKDLENsnaKLQEKIQELKANE 1829
Cdd:pfam06160 154 QLAEIEEEFSQFEELTESGDY---LE---AREVLEKLEEETDALE----ELMEDIPPLYEELKT---ELPDQLEELKEGY 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1830 HQLItlKKDVNETQKKV-SEMEQLKKQIKDQSLTLSKLEIENLNLA-QKLHENLEEM-----------KSVMKERDNLRR 1896
Cdd:pfam06160 221 REME--EEGYALEHLNVdKEIQQLEEQLEENLALLENLELDEAEEAlEEIEERIDQLydllekevdakKYVEKNLPEIED 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1897 VEETLKLERDQLKESLQETKAR------DLEIQQELKTARmlsKEHKETVDKLREKISEKTIQISDIQKDLDKSKDELQK 1970
Cdd:pfam06160 299 YLEHAEEQNKELKEELERVQQSytlnenELERVRGLEKQL---EELEKRYDEIVERLEEKEVAYSELQEELEEILEQLEE 375
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
499-951 |
1.21e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 44.37 E-value: 1.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 499 ELNSLRADYDNLVLDYEQLRTEKEEMELKLKE-KNDLDEFEALER-----KTKKDQEMQLIHEISNLKNLVKHAEVYnQD 572
Cdd:COG4717 82 EAEEKEEEYAELQEELEELEEELEELEAELEElREELEKLEKLLQllplyQELEALEAELAELPERLEELEERLEEL-RE 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 573 LENELSSKVELLREKEDQIKKLQEYIDSQKLENIKmdlsyslesiedpkqmkqtlfdaetvalDAKRESAFLRSENLELK 652
Cdd:COG4717 161 LEEELEELEAELAELQEELEELLEQLSLATEEELQ----------------------------DLAEELEELQQRLAELE 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 653 EKMKELATTYKQMENDIQLYQSQLEAKKkmqvdLEKELQSAFNEITKLTSLIDGKVPKDLLCNLELE---------GKIT 723
Cdd:COG4717 213 EELEEAQEELEELEEELEQLENELEAAA-----LEERLKEARLLLLIAAALLALLGLGGSLLSLILTiagvlflvlGLLA 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 724 DLQKELNKEVEENEALREEVILLSELKSLpseverLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKD 803
Cdd:COG4717 288 LLFLLLAREKASLGKEAEELQALPALEEL------EEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEE 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 804 DLAtTQSNYKSTDQEFQNFK-TLHMDFEQKYKMvLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKT--QELQEKTR 880
Cdd:COG4717 362 ELQ-LEELEQEIAALLAEAGvEDEEELRAALEQ-AEEYQELKEELEELEEQLEELLGELEELLEALDEEEleEELEELEE 439
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 767930923 881 EVQERLNEMEQLKEQLENRDSTLQTVEREKTL--ITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSD 951
Cdd:COG4717 440 ELEELEEELEELREELAELEAELEQLEEDGELaeLLQELEELKAELRELAEEWAALKLALELLEEAREEYREE 512
|
|
| HEC1 |
COG5185 |
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell ... |
1307-1589 |
1.39e-03 |
|
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 444066 [Multi-domain] Cd Length: 594 Bit Score: 44.18 E-value: 1.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1307 ELELLTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKER-DNLKTIKEALEVKHDQLKEHIRETLAKIQESQSK 1385
Cdd:COG5185 232 EEALKGFQDPESELEDLAQTSDKLEKLVEQNTDLRLEKLGENAESsKRLNENANNLIKQFENTKEKIAEYTKSIDIKKAT 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1386 QEQSLNMKEKDNETTKIVSEMEQFKPKDSALLRIEIEMLGLSKRLQESHDEMKSVAKEKdDLQRLQEVLQSESDQLKENI 1465
Cdd:COG5185 312 ESLEEQLAAAEAEQELEESKRETETGIQNLTAEIEQGQESLTENLEAIKEEIENIVGEV-ELSKSSEELDSFKDTIESTK 390
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1466 KEIVAKHLETEEELKVAhccLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQFNIKQISEVQE 1545
Cdd:COG5185 391 ESLDEIPQNQRGYAQEI---LATLEDTLKAADRQIEELQRQIEQATSSNEEVSKLLNELISELNKVMREADEESQSRLEE 467
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 767930923 1546 KVNELKQFKEHRKAK-DSALQSIESKMLELTNRLQESQEEIQIMI 1589
Cdd:COG5185 468 AYDEINRSVRSKKEDlNEELTQIESRVSTLKATLEKLRAKLERQL 512
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1289-1947 |
1.49e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 44.14 E-value: 1.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1289 QELLPNVKEVSETQETM----NELELLTE-----QSTTKDSTTLARIEMERLRLN-----EKFQESQEEIKSLTKERDNL 1354
Cdd:COG4913 228 DALVEHFDDLERAHEALedarEQIELLEPirelaERYAAARERLAELEYLRAALRlwfaqRRLELLEAELEELRAELARL 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1355 KTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQSLNMKEKDNETTKivSEMEQfkpkDSALLRIEIEMLGLSkrLQESH 1434
Cdd:COG4913 308 EAELERLEARLDALREELDELEAQIRGNGGDRLEQLEREIERLEREL--EERER----RRARLEALLAALGLP--LPASA 379
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1435 DEMKSVAKEkddLQRLQEVLQSESDQLKENIKEIVAKHLETEEElkvahccLKEQEETINELR---VNLSEKETEIstiq 1511
Cdd:COG4913 380 EEFAALRAE---AAALLEALEEELEALEEALAEAEAALRDLRRE-------LRELEAEIASLErrkSNIPARLLAL---- 445
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1512 kqLEAINDKLQNKIQ---------EIYEKEEQ-------------FNI----KQISEVQEKVNELKQ------FKEHRKA 1559
Cdd:COG4913 446 --RDALAEALGLDEAelpfvgeliEVRPEEERwrgaiervlggfaLTLlvppEHYAAALRWVNRLHLrgrlvyERVRTGL 523
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1560 KDSALQSIESKML--ELTNRLQESQEEIQIMIKEK---------EEMKRVQEALQIERdQLKENtKEIVAKMKESQEKEY 1628
Cdd:COG4913 524 PDPERPRLDPDSLagKLDFKPHPFRAWLEAELGRRfdyvcvdspEELRRHPRAITRAG-QVKGN-GTRHEKDDRRRIRSR 601
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1629 QFLKMTAVNETQEKMCEIEHLKEQFETQKLNLENIETEnIRLTQILHENLEEMRSVTKERDDLRSVEETLkVERDQLKEN 1708
Cdd:COG4913 602 YVLGFDNRAKLAALEAELAELEEELAEAEERLEALEAE-LDALQERREALQRLAEYSWDEIDVASAEREI-AELEAELER 679
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1709 LRETiTRDLEK-QEELKIVHMHLKEHQETIDKLRGIVSEKTNEISNMQKDLEHSNDALKAQDLKIQEELRIahmHLKEQ- 1786
Cdd:COG4913 680 LDAS-SDDLAAlEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRA---LLEERf 755
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1787 -QETIDKLRGIVSEK-TDKLSNMQKDLENSNAKLQEKIQELK----ANEHQLITLKKDVNETQK-----KVSEMEQLKKQ 1855
Cdd:COG4913 756 aAALGDAVERELRENlEERIDALRARLNRAEEELERAMRAFNrewpAETADLDADLESLPEYLAlldrlEEDGLPEYEER 835
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1856 IKDQsltLSKLEIENL-NLAQKLHENLEEMKSVMKE-RDNLRRVE----ETLKLE-RDQLKESLQE--TKARDLEIQQEL 1926
Cdd:COG4913 836 FKEL---LNENSIEFVaDLLSKLRRAIREIKERIDPlNDSLKRIPfgpgRYLRLEaRPRPDPEVREfrQELRAVTSGASL 912
|
730 740
....*....|....*....|.
gi 767930923 1927 KTARmLSKEHKETVDKLREKI 1947
Cdd:COG4913 913 FDEE-LSEARFAALKRLIERL 932
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1580-1828 |
1.52e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 44.14 E-value: 1.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1580 ESQEEIQIMIKEKEEMKRVQEALQIERDQLkentkEIVAKMKESQEkEYQflkmtavnETQEKMCEIEHLKEqfetqKLN 1659
Cdd:COG4913 222 DTFEAADALVEHFDDLERAHEALEDAREQI-----ELLEPIRELAE-RYA--------AARERLAELEYLRA-----ALR 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1660 LENIETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETITRDLEK-QEELKivhmHLKEHQETID 1738
Cdd:COG4913 283 LWFAQRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIRGNGGDRLEQlEREIE----RLERELEERE 358
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1739 KLRGIVSEKTNEIsnmQKDLEHSNDALKAQDLKIQEELRIAHMHLKEQQETIDKLRgivsektDKLSNMQKDLEnsnaKL 1818
Cdd:COG4913 359 RRRARLEALLAAL---GLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAE-------AALRDLRRELR----EL 424
|
250
....*....|
gi 767930923 1819 QEKIQELKAN 1828
Cdd:COG4913 425 EAEIASLERR 434
|
|
| PRK00409 |
PRK00409 |
recombination and DNA strand exchange inhibitor protein; Reviewed |
849-977 |
1.55e-03 |
|
recombination and DNA strand exchange inhibitor protein; Reviewed
Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 44.05 E-value: 1.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 849 NLSKEAQKFD---SSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLEnrdstlqtvEREKTLITEKLQQTLEEVK 925
Cdd:PRK00409 510 LIGEDKEKLNeliASLEELERELEQKAEEAEALLKEAEKLKEELEEKKEKLQ---------EEEDKLLEEAEKEAQQAIK 580
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 767930923 926 TLTQEKDD-LKQLQESLQIERDQLKSdiHDTvnmnIDTQEQLRNALESLKQHQ 977
Cdd:PRK00409 581 EAKKEADEiIKELRQLQKGGYASVKA--HEL----IEARKRLNKANEKKEKKK 627
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
759-1091 |
1.58e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 43.35 E-value: 1.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 759 LRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEFQNFKTLHMDFEQKYKMVLE 838
Cdd:COG4372 29 LSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQE 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 839 ENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKtLITEKLQ 918
Cdd:COG4372 109 EAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAE-AEQALDE 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 919 QTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIHDTVNMNIDTQEQLRNALESLKQHQETINTLKSKISEEVSRNLHME 998
Cdd:COG4372 188 LLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEELELAI 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 999 ENTGETKDEFQQKMVGIDKKQDLEAKNTQTLTADVKDNEIIEQQRKIFSLIQEKNELQQMLESVIAEKEQLKTDLKENIE 1078
Cdd:COG4372 268 LVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLELALAILLAELADLLQLLL 347
|
330
....*....|...
gi 767930923 1079 MTIENQEELRLLG 1091
Cdd:COG4372 348 VGLLDNDVLELLS 360
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
1841-1974 |
1.60e-03 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 43.42 E-value: 1.60e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1841 ETQKKVSEMEQLKKQIKDqsltLSKLeienLNLAQKLHENLEEmkSVMKERDNLRRVE---ETLKLERDQLKESLQETKA 1917
Cdd:PRK09039 47 EISGKDSALDRLNSQIAE----LADL----LSLERQGNQDLQD--SVANLRASLSAAEaerSRLQALLAELAGAGAAAEG 116
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 767930923 1918 RDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKDLDKSKDELQKKDRQ 1974
Cdd:PRK09039 117 RAGELAQELDSEKQVSARALAQVELLNQQIAALRRQLAALEAALDASEKRDRESQAK 173
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
1050-1255 |
1.65e-03 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 43.73 E-value: 1.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1050 QEKNELQQMLESVIAEKEQLKTDLKENIEMTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKL 1129
Cdd:pfam07888 41 QERAELLQAQEAANRQREKEKERYKRDREQWERQRRELESRVAELKEELRQSREKHEELEEKYKELSASSEELSEEKDAL 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1130 -KEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKERKVLKEL 1208
Cdd:pfam07888 121 lAQRAAHEARIRELEEDIKTLTQRVLERETELERMKERAKKAGAQRKEEEAERKQLQAKLQQTEEELRSLSKEFQELRNS 200
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 767930923 1209 QKSFETERDHLRGYIReieatglQTKEELKIAHIHLKEHQETIDELR 1255
Cdd:pfam07888 201 LAQRDTQVLQLQDTIT-------TLTQKLTTAHRKEAENEALLEELR 240
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
842-998 |
1.69e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 43.85 E-value: 1.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 842 RMNQEIVNLSKEAQKFDSSLGALKTELSyktqELQEKTREVQERLNEMEQLKEQ-------------LENRDSTLQTVER 908
Cdd:COG3206 202 RQKNGLVDLSEEAKLLLQQLSELESQLA----EARAELAEAEARLAALRAQLGSgpdalpellqspvIQQLRAQLAELEA 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 909 EKTLITEKLQQTLEEVKTLTQEKDDLKQLqesLQIERDQLKSDIHDTVNMNIDTQEQLRNALESLKQHQETINTLKSKIS 988
Cdd:COG3206 278 ELAELSARYTPNHPDVIALRAQIAALRAQ---LQQEAQRILASLEAELEALQAREASLQAQLAQLEARLAELPELEAELR 354
|
170
....*....|....*
gi 767930923 989 E-----EVSRNLHME 998
Cdd:COG3206 355 RlerevEVARELYES 369
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
1329-1530 |
1.90e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 43.46 E-value: 1.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1329 ERLRLNEKFQESQEEIKS---------LTKERDNLKTIKEALEVKHDQLKEHIREtlakiQESQSKQEQSLNMKekdneT 1399
Cdd:PHA02562 195 QQIKTYNKNIEEQRKKNGeniarkqnkYDELVEEAKTIKAEIEELTDELLNLVMD-----IEDPSAALNKLNTA-----A 264
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1400 TKIVSEMEQFKpKDSALLRIEIE----MLGLS---KRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEI--VA 1470
Cdd:PHA02562 265 AKIKSKIEQFQ-KVIKMYEKGGVcptcTQQISegpDRITKIKDKLKELQHSLEKLDTAIDELEEIMDEFNEQSKKLleLK 343
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 767930923 1471 KHLETEE-ELKVAHCCLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYE 1530
Cdd:PHA02562 344 NKISTNKqSLITLVDKAKKVKAAIEELQAEFVDNAEELAKLQDELDKIVKTKSELVKEKYH 404
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1082-1292 |
2.01e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.21 E-value: 2.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1082 ENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLKEksqqlqekqqqllnVQEEMSEMQKKINEIE 1161
Cdd:COG4942 24 EAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRA--------------LEQELAALEAELAELE 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1162 NLKNELKNKELTLEHMETERLELAQKLNE--------NYEEVKSITKERKVLKELQKSFETERDHLRGYIREIEATGLQT 1233
Cdd:COG4942 90 KEIAELRAELEAQKEELAELLRALYRLGRqpplalllSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAEL 169
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 767930923 1234 KEELKIAHIHLKEHQETIDELRRSVSEKTAQIintQDLEKSHTKLQEEIPVLHEEQELL 1292
Cdd:COG4942 170 EAERAELEALLAELEEERAALEALKAERQKLL---ARLEKELAELAAELAELQQEAEEL 225
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1787-1969 |
2.18e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 43.47 E-value: 2.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1787 QETIDKLRGIVSEKTDKLSNMQK--DLENSNAKLQEKIQELKANEHQLITLKKDVNETQkkvSEMEQLKKQIKDQSLTLS 1864
Cdd:COG3206 181 EEQLPELRKELEEAEAALEEFRQknGLVDLSEEAKLLLQQLSELESQLAEARAELAEAE---ARLAALRAQLGSGPDALP 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1865 klEIENLNLAQKLHENLEEMKSvmKERDNLRRVEE------TLKLERDQLKESLQETKARDL-EIQQELKTARMLSKEHK 1937
Cdd:COG3206 258 --ELLQSPVIQQLRAQLAELEA--ELAELSARYTPnhpdviALRAQIAALRAQLQQEAQRILaSLEAELEALQAREASLQ 333
|
170 180 190
....*....|....*....|....*....|....*
gi 767930923 1938 ETVDKLREKIS---EKTIQISDIQKDLDKSKDELQ 1969
Cdd:COG3206 334 AQLAQLEARLAelpELEAELRRLEREVEVARELYE 368
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
518-1350 |
2.28e-03 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 43.50 E-value: 2.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 518 RTEKEEMELKLKEKNDLDEFEALERKTKKDQEMQLIHEISNLKNLVKHAEVYNQDLENELSSK-VELLREKEDQIKKLQE 596
Cdd:TIGR00606 229 KEAQLESSREIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALKSRKKQMEKDNSELELKmEKVFQGTDEQLNDLYH 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 597 YIDS--QKLENIKMDLSYSLESIEDPKQM---KQTLFDAE--TVALDAKRESAFLRSENLELKEKMKEL--------ATT 661
Cdd:TIGR00606 309 NHQRtvREKERELVDCQRELEKLNKERRLlnqEKTELLVEqgRLQLQADRHQEHIRARDSLIQSLATRLeldgfergPFS 388
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 662 YKQMENDIQLYQSQLEAKKKMQVDLEKELQSafNEITKLTSLIDGKVPKDLLcnleleGKITDLQKE-LNKEVEENEALR 740
Cdd:TIGR00606 389 ERQIKNFHTLVIERQEDEAKTAAQLCADLQS--KERLKQEQADEIRDEKKGL------GRTIELKKEiLEKKQEELKFVI 460
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 741 eevillSELKSLPSEVER-LRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEF 819
Cdd:TIGR00606 461 ------KELQQLEGSSDRiLELDQELRKAERELSKAEKNSLTETLKKEVKSLQNEKADLDRKLRKLDQEMEQLNHHTTTR 534
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 820 QNFKTLHMDFEQKYKMVLEENERMNQEIVNLSKEAqKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENR 899
Cdd:TIGR00606 535 TQMEMLTKDKMDKDEQIRKIKSRHSDELTSLLGYF-PNKKQLEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHINNE 613
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 900 dstlqtvEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQL-----KSDIHDTVNMNIDTQEQ-----LRNA 969
Cdd:TIGR00606 614 -------LESKEEQLSSYEDKLFDVCGSQDEESDLERLKEEIEKSSKQRamlagATAVYSQFITQLTDENQsccpvCQRV 686
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 970 LESLKQHQETINTLKSKI---------SEEVSRNLHMEENTGETKDEFQQKMVGIDKKQ--DLEAKNTQTLTADVKDNEI 1038
Cdd:TIGR00606 687 FQTEAELQEFISDLQSKLrlapdklksTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEipELRNKLQKVNRDIQRLKND 766
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1039 IEQQRKIFSLIQEKNELQQMLESVIAEKEQLKTDLKENIEMTIENQEELRLL-GDELKKQQEIVAQEKNHAIKK---EGE 1114
Cdd:TIGR00606 767 IEEQETLLGTIMPEEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGSdLDRTVQQVNQEKQEKQHELDTvvsKIE 846
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1115 LSRTC------------DRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNKELTLEHMETERL 1182
Cdd:TIGR00606 847 LNRKLiqdqqeqiqhlkSKTNELKSEKLQIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQDSPLETFLEKDQQEKE 926
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1183 ELaqkLNENYEEVKSITKERKVLKELQKSFETERDHLRGYIREIEATGLQTKE-ELKIAHIHLKE---HQETIDELRRSV 1258
Cdd:TIGR00606 927 EL---ISSKETSNKKAQDKVNDIKEKVKNIHGYMKDIENKIQDGKDDYLKQKEtELNTVNAQLEEcekHQEKINEDMRLM 1003
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1259 SektaQIINTQDLEKSHtkLQEEIPVLHEEQELLPNVKEVSETQETMNELELL-TEQSTTKDSTTLARIEMERLRLNEKF 1337
Cdd:TIGR00606 1004 R----QDIDTQKIQERW--LQDNLTLRKRENELKEVEEELKQHLKEMGQMQVLqMKQEHQKLEENIDLIKRNHVLALGRQ 1077
|
890
....*....|...
gi 767930923 1338 QESQEEIKSLTKE 1350
Cdd:TIGR00606 1078 KGYEKEIKHFKKE 1090
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
1636-1858 |
2.29e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 43.08 E-value: 2.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1636 VNETQEKMC--EIEHLKEQFETQKLNLENIETENirltqilHENLEEMRSVTkerDDLRSVEETLKVERDQLKENLREtI 1713
Cdd:PHA02562 178 ELNQQIQTLdmKIDHIQQQIKTYNKNIEEQRKKN-------GENIARKQNKY---DELVEEAKTIKAEIEELTDELLN-L 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1714 TRDLEKQEE-------------------LKIVHMHlKEHQE------TIDKLRGIVSEKTNEISNMQKDLEHSNDALKaQ 1768
Cdd:PHA02562 247 VMDIEDPSAalnklntaaakikskieqfQKVIKMY-EKGGVcptctqQISEGPDRITKIKDKLKELQHSLEKLDTAID-E 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1769 DLKIQEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSE 1848
Cdd:PHA02562 325 LEEIMDEFNEQSKKLLELKNKISTNKQSLITLVDKAKKVKAAIEELQAEFVDNAEELAKLQDELDKIVKTKSELVKEKYH 404
|
250
....*....|
gi 767930923 1849 MEQLKKQIKD 1858
Cdd:PHA02562 405 RGIVTDLLKD 414
|
|
| secA |
PRK12903 |
preprotein translocase subunit SecA; Reviewed |
1161-1452 |
2.49e-03 |
|
preprotein translocase subunit SecA; Reviewed
Pssm-ID: 237258 [Multi-domain] Cd Length: 925 Bit Score: 43.50 E-value: 2.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1161 ENLKNELKNKELTLEHMETERLELAQKLNENYEEvkSITKERKVLKElqksfETERDHLRGYIREIEatglqtkeeLKIA 1240
Cdd:PRK12903 657 DNLLRITHFKFSEKDFENYHKEELAQYLIEALNE--IYFKKRQVILD-----KIALNTFFESERYII---------LSAL 720
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1241 HIHLKEHQETIDELRRSV-----SEKTAQIINTQDLEKSHTKLQEEIPvlheeQELLPNVKEVSETQETMNELELLTEQS 1315
Cdd:PRK12903 721 DKYWQNHIDTMDKLRSGVnlvqySQKNPYQVYTEEGTKKFNILLQEIA-----YDVIVSLFNNPNAEKILIITEILSDGI 795
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1316 TTKDSTTLARIEMERLRLNEkfqesQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQSLNMKEK 1395
Cdd:PRK12903 796 NNSDINDRPQELIDQIIESE-----EERLKALRIQREEMLMRPEELELINEEQKNLKQEIKLELSEIQEAEEEIQNINEN 870
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 767930923 1396 DNettkivsEMEQFKPKDSALLRIEIEMLGLSKRLQESHDEMKSVAKEKDDLQRLQE 1452
Cdd:PRK12903 871 KN-------EFVEFKNDPKKLNKLIIAKDVLIKLVISSDEIKQDEKTTKKKKKDLEK 920
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1818-2018 |
2.52e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 43.37 E-value: 2.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1818 LQEKIQELKANEHQLITLKKDVNETQKKVSEMEQLKKQIkdQSLTLSKLEIENLNLAQKLHENLEEMKSVMKERDNLRRV 1897
Cdd:COG4913 240 AHEALEDAREQIELLEPIRELAERYAAARERLAELEYLR--AALRLWFAQRRLELLEAELEELRAELARLEAELERLEAR 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1898 EETLKLERDQLKESLQETKARDLE-IQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKDL----DKSKDELQKKD 1972
Cdd:COG4913 318 LDALREELDELEAQIRGNGGDRLEqLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFaalrAEAAALLEALE 397
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 767930923 1973 RQNHQVKPEKRLLSDGQQHLTESLREKCSRIKELLKRYSEMDDHYE 2018
Cdd:COG4913 398 EELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSNIPARLL 443
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
496-984 |
2.58e-03 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 43.35 E-value: 2.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 496 IESELNSLRADYDNLVLDYEQLRTEKEEMELKLKEKNDLDEfEALERKTKKDQEMQLIHEISNLKnlvkhaEVYNQDLEN 575
Cdd:PRK01156 216 TLKEIERLSIEYNNAMDDYNNLKSALNELSSLEDMKNRYES-EIKTAESDLSMELEKNNYYKELE------ERHMKIIND 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 576 ELSSKVELLREKEDQIKKLQEYidSQKLENIKMDLSYSLESIEDPKQMKQTlfdaetvaldakresaflRSENLELKEKM 655
Cdd:PRK01156 289 PVYKNRNYINDYFKYKNDIENK--KQILSNIDAEINKYHAIIKKLSVLQKD------------------YNDYIKKKSRY 348
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 656 KELATTYKQMENDIQLYQSQL---EAKKKMQVDLEKELQSAFNEITKLTSL--IDGKVPKDLLCNL-----ELEGKITDL 725
Cdd:PRK01156 349 DDLNNQILELEGYEMDYNSYLksiESLKKKIEEYSKNIERMSAFISEILKIqeIDPDAIKKELNEInvklqDISSKVSSL 428
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 726 QKELNKEVEENEALREEVILLS--------------------------ELKSLPSEVERLRKEIQDKSEELHIITSEKDK 779
Cdd:PRK01156 429 NQRIRALRENLDELSRNMEMLNgqsvcpvcgttlgeeksnhiinhyneKKSRLEEKIREIEIEVKDIDEKIVDLKKRKEY 508
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 780 LFSEVVHK----ESRVQGLLEEIGKTKDDLATTQSNYKSTDQEFQNFKTLHM-DFEQKYKMVLEEN-------------- 840
Cdd:PRK01156 509 LESEEINKsineYNKIESARADLEDIKIKINELKDKHDKYEEIKNRYKSLKLeDLDSKRTSWLNALavislidietnrsr 588
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 841 -ERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQ 919
Cdd:PRK01156 589 sNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSIREIENEANNLNNKYNEIQENKILIEKLRGKIDNYKKQIAEIDSIIPD 668
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 767930923 920 TLEEVKTLTQEKDDLKQLQESLQ---IERDQLKSdIHDTVNMNIDTQEQ----LRNALESLKQHQETINTLK 984
Cdd:PRK01156 669 LKEITSRINDIEDNLKKSRKALDdakANRARLES-TIEILRTRINELSDrindINETLESMKKIKKAIGDLK 739
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1816-1969 |
2.63e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 43.37 E-value: 2.63e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1816 AKLQEKIQELKAnehqlitLKKDVNETQKKVSEMEQLKKQIKDQSLTLSKLeienlnlaQKLHENLEEMKSVMKERDNLR 1895
Cdd:COG4913 610 AKLAALEAELAE-------LEEELAEAEERLEALEAELDALQERREALQRL--------AEYSWDEIDVASAEREIAELE 674
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 767930923 1896 RVEETLKLERDQLKeslqetkardlEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKDLDKSKDELQ 1969
Cdd:COG4913 675 AELERLDASSDDLA-----------ALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLE 737
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
745-899 |
2.64e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 41.83 E-value: 2.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 745 LLSELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSN--YKSTDQEFQNF 822
Cdd:COG1579 22 LEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNNkeYEALQKEIESL 101
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 767930923 823 KTLHMDFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSyktQELQEKTREVQERLNEMEQLKEQLENR 899
Cdd:COG1579 102 KRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELD---EELAELEAELEELEAEREELAAKIPPE 175
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1682-1918 |
2.65e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 43.08 E-value: 2.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1682 RSVTKERDDLRSVEETLKVERDQLKENLRETiTRDLEK-QEELKIVhmhlkehqeTIDKLRGIVSEKTNEISNMQKDLEH 1760
Cdd:COG3206 164 QNLELRREEARKALEFLEEQLPELRKELEEA-EAALEEfRQKNGLV---------DLSEEAKLLLQQLSELESQLAEARA 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1761 SNDALKAQDLKIQEELRIAHMHLKE--QQETIDKLRGIVSEKTDKLSNMQKDLENSN---AKLQEKIQELKAN-----EH 1830
Cdd:COG3206 234 ELAEAEARLAALRAQLGSGPDALPEllQSPVIQQLRAQLAELEAELAELSARYTPNHpdvIALRAQIAALRAQlqqeaQR 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1831 QLITLKKDVNETQKKVSEMEQLKKQIKDQSLTLSKLEIE------NLNLAQKLHENLeemksvmkerdnLRRVEETlkle 1904
Cdd:COG3206 314 ILASLEAELEALQAREASLQAQLAQLEARLAELPELEAElrrlerEVEVARELYESL------------LQRLEEA---- 377
|
250
....*....|....
gi 767930923 1905 rdQLKESLQETKAR 1918
Cdd:COG3206 378 --RLAEALTVGNVR 389
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
637-1282 |
2.87e-03 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 43.29 E-value: 2.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 637 AKRESAFLRSENLELKekmkeLATTYKQMENDIQLYQSQLEAKKKMQVDL-------EKELQSAFNEITKLTSLIDGKVP 709
Cdd:pfam12128 244 TKLQQEFNTLESAELR-----LSHLHFGYKSDETLIASRQEERQETSAELnqllrtlDDQWKEKRDELNGELSAADAAVA 318
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 710 KD------------LLCNLELEGKITDLQKELNKEVEENEALREEVILLSELKSLPSEVERLR--------KEIQDKSEE 769
Cdd:pfam12128 319 KDrselealedqhgAFLDADIETAAADQEQLPSWQSELENLEERLKALTGKHQDVTAKYNRRRskikeqnnRDIAGIKDK 398
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 770 LHIITSEKDKLFSEV-VHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEFqNFKTLHMDFEQKYKMVLEEN----ERMN 844
Cdd:pfam12128 399 LAKIREARDRQLAVAeDDLQALESELREQLEAGKLEFNEEEYRLKSRLGEL-KLRLNQATATPELLLQLENFderiERAR 477
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 845 QEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVERE----------KTLIT 914
Cdd:pfam12128 478 EEQEAANAEVERLQSELRQARKRRDQASEALRQASRRLEERQSALDELELQLFPQAGTLLHFLRKeapdweqsigKVISP 557
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 915 EKLQQT-LEEVKTLTQEKD---------DLKQLQ--------ESLQIERDQLKSDIHDtvnmnidtqeqlrnALESLKQH 976
Cdd:pfam12128 558 ELLHRTdLDPEVWDGSVGGelnlygvklDLKRIDvpewaaseEELRERLDKAEEALQS--------------AREKQAAA 623
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 977 QETINTLKSKIsEEVSRNLHMEENTGETKDEFQQKMVgiDKKQDLEAKNTQTLTAdvkdneiiEQQRKIFSLIQEKNELQ 1056
Cdd:pfam12128 624 EEQLVQANGEL-EKASREETFARTALKNARLDLRRLF--DEKQSEKDKKNKALAE--------RKDSANERLNSLEAQLK 692
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1057 QMLESVIAEKEQLKTDLKENiemTIENQEELRLLGDELKKQ-----QEIVAQEKNHAIKKEG---ELSRTCDRLAEVEEK 1128
Cdd:pfam12128 693 QLDKKHQAWLEEQKEQKREA---RTEKQAYWQVVEGALDAQlallkAAIAARRSGAKAELKAletWYKRDLASLGVDPDV 769
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1129 LKEKSQQLQEKQQQLLNV---QEEMSEMQKKINEIENLKNElkNKELTLEHMETERLELAQKLNENYEEVKSITKErkvl 1205
Cdd:pfam12128 770 IAKLKREIRTLERKIERIavrRQEVLRYFDWYQETWLQRRP--RLATQLSNIERAISELQQQLARLIADTKLRRAK---- 843
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 767930923 1206 kelqksFETERDHLRGyiREIEATGLQTKEELKIAHI-HLKEHQeTIDELRRSVSEKTAQIintQDLEKSHTKLQEEI 1282
Cdd:pfam12128 844 ------LEMERKASEK--QQVRLSENLRGLRCEMSKLaTLKEDA-NSEQAQGSIGERLAQL---EDLKLKRDYLSESV 909
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
926-1223 |
3.18e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 42.99 E-value: 3.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 926 TLTQEKDD-LKQLQES--LQIErdQLKSDIHDtvnmnidtqEQLRNALESLKQHQETINTLKSKISEEvsrnlhmeentg 1002
Cdd:PRK05771 13 TLKSYKDEvLEALHELgvVHIE--DLKEELSN---------ERLRKLRSLLTKLSEALDKLRSYLPKL------------ 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1003 ETKDEFQQKMvgidKKQDLEAkntqtlTADVKDNEIIEQQRKIFSLIQEKNELQQMLESVIAEKEQLKtdLKENIEMTIE 1082
Cdd:PRK05771 70 NPLREEKKKV----SVKSLEE------LIKDVEEELEKIEKEIKELEEEISELENEIKELEQEIERLE--PWGNFDLDLS 137
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1083 NQEELRL-------LGDELKKQQEIVAQEKNHAIKKEGELSRTC------DRLAEVEEKLKeKSQQLQEKQQQLLNVQEE 1149
Cdd:PRK05771 138 LLLGFKYvsvfvgtVPEDKLEELKLESDVENVEYISTDKGYVYVvvvvlkELSDEVEEELK-KLGFERLELEEEGTPSEL 216
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 767930923 1150 MSEMQKKINEIENLKNELKNKeltLEhmeterlELAQKLNE---NYEEVKSITKERKVLKELQKsfETER-DHLRGYI 1223
Cdd:PRK05771 217 IREIKEELEEIEKERESLLEE---LK-------ELAKKYLEellALYEYLEIELERAEALSKFL--KTDKtFAIEGWV 282
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
871-1110 |
3.19e-03 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 42.98 E-value: 3.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 871 KTQELQEKTREVQERLnemEQLKEQLENRDSTLQTVEREktliTEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKS 950
Cdd:PRK11281 67 QTLALLDKIDRQKEET---EQLKQQLAQAPAKLRQAQAE----LEALKDDNDEETRETLSTLSLRQLESRLAQTLDQLQN 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 951 DIHDTVNMNID-----TQ-EQLRNAL-ESLKQHQETINTLKS-KISEEVSRN-----LHMEENTGETKDEFQQK-MVGID 1016
Cdd:PRK11281 140 AQNDLAEYNSQlvslqTQpERAQAALyANSQRLQQIRNLLKGgKVGGKALRPsqrvlLQAEQALLNAQNDLQRKsLEGNT 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1017 KKQDLEAK-------NTQTLTADVKD-NEIIEQQRkifsLIQEKNELQQMLESVIAEKEQ----LKTDLKENIEMT---I 1081
Cdd:PRK11281 220 QLQDLLQKqrdyltaRIQRLEHQLQLlQEAINSKR----LTLSEKTVQEAQSQDEAARIQanplVAQELEINLQLSqrlL 295
|
250 260 270
....*....|....*....|....*....|.
gi 767930923 1082 ENQEEL-RLLGDELK-KQQEIVAQEKNHAIK 1110
Cdd:PRK11281 296 KATEKLnTLTQQNLRvKNWLDRLTQSERNIK 326
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
1025-1238 |
3.28e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 42.69 E-value: 3.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1025 NTQTLTADVKDNEIIEQ---QRKIFSLIQEKN-----ELQQMLESVIAEKEQLKTDLKE------NIEMTIENQEE-LRL 1089
Cdd:PHA02562 180 NQQIQTLDMKIDHIQQQiktYNKNIEEQRKKNgeniaRKQNKYDELVEEAKTIKAEIEEltdellNLVMDIEDPSAaLNK 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1090 LGDELKKQQEIVAQ-EKNHAIKKEGELSRTCDRLAEVEEKLKEKsqqlqekqqqllnVQEEMSEMQKKINEIENLKNELK 1168
Cdd:PHA02562 260 LNTAAAKIKSKIEQfQKVIKMYEKGGVCPTCTQQISEGPDRITK-------------IKDKLKELQHSLEKLDTAIDELE 326
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 767930923 1169 NKELTLEHMETERLELAQKLNENYE----EVKSITKERKVLKELQKSFETERDHLRGYIREIEATGlQTKEELK 1238
Cdd:PHA02562 327 EIMDEFNEQSKKLLELKNKISTNKQslitLVDKAKKVKAAIEELQAEFVDNAEELAKLQDELDKIV-KTKSELV 399
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
830-1104 |
3.41e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 42.58 E-value: 3.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 830 EQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVERE 909
Cdd:COG4372 30 SEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQEE 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 910 KTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQ---IERDQLKSDIHDTVNMNIDTQEQLRNALESLKQhQETINTLKSK 986
Cdd:COG4372 110 AEELQEELEELQKERQDLEQQRKQLEAQIAELQseiAEREEELKELEEQLESLQEELAALEQELQALSE-AEAEQALDEL 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 987 ISEEVSRNLHMEENTGETKDEFQQKMVGIDKKQDLEAKNTQTLTADVKDNEIIEQQRKIFSLIQEKNELQQMLESVIAEK 1066
Cdd:COG4372 189 LKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEELELAIL 268
|
250 260 270
....*....|....*....|....*....|....*...
gi 767930923 1067 EQLKTDLKENIEMTIENQEELRLLGDELKKQQEIVAQE 1104
Cdd:COG4372 269 VEKDTEEEELEIAALELEALEEAALELKLLALLLNLAA 306
|
|
| RND_1 |
NF037998 |
protein translocase SecDF, variant type; Members of this family are identified by TCDB as ... |
1500-1608 |
3.60e-03 |
|
protein translocase SecDF, variant type; Members of this family are identified by TCDB as belonging to 2.A.6.4.4, a variant 12-TM type SecDF, as found in Spiroplasma, Mesoplasma, and Acholeplasma.
Pssm-ID: 468306 Cd Length: 1237 Bit Score: 42.84 E-value: 3.60e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1500 LSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQFNIKQISEVQEKVNELKQFK---EHRKAKDSALQSIESKMLELTN 1576
Cdd:NF037998 639 LTNKEKLSSKLLLKIKKINDKIDLLKKKEENKEAKKNAKLIEKVKAKIKKLEQKItklKLNKKKSNKIIKIRWKKKDWIF 718
|
90 100 110
....*....|....*....|....*....|..
gi 767930923 1577 RLQESQEEiqIMIKEKEEMKRVQEALQIERDQ 1608
Cdd:NF037998 719 FLKDNTDV--ILAIESEIEIQVIEKIKVKRNE 748
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
653-902 |
3.64e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.44 E-value: 3.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 653 EKMKELATTYKQMENDIQLYQSQLEAKKKMQVDLEKELQSAFNEITKLTSLIDgkvpkdllcnlELEGKITDLQKELNKE 732
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIR-----------ALEQELAALEAELAEL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 733 VEENEALREEvilLSELKSLPSEVERLRKEIQDKSEELHIITSEKdklFSEVVHKESRVQGLLEEIGKTKDDLATTQSNY 812
Cdd:COG4942 89 EKEIAELRAE---LEAQKEELAELLRALYRLGRQPPLALLLSPED---FLDAVRRLQYLKYLAPARREQAEELRADLAEL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 813 KSTDQEFQNFKtlhmdfeQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQL 892
Cdd:COG4942 163 AALRAELEAER-------AELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAE 235
|
250
....*....|
gi 767930923 893 KEQLENRDST 902
Cdd:COG4942 236 AAAAAERTPA 245
|
|
| Mitofilin |
pfam09731 |
Mitochondrial inner membrane protein; Mitofilin controls mitochondrial cristae morphology. ... |
1155-1522 |
3.79e-03 |
|
Mitochondrial inner membrane protein; Mitofilin controls mitochondrial cristae morphology. Mitofilin is enriched in the narrow space between the inner boundary and the outer membranes, where it forms a homotypic interaction and assembles into a large multimeric protein complex. The first 78 amino acids contain a typical amino-terminal-cleavable mitochondrial presequence rich in positive-charged and hydroxylated residues and a membrane anchor domain. In addition, it has three centrally located coiled coil domains.
Pssm-ID: 430783 [Multi-domain] Cd Length: 618 Bit Score: 42.44 E-value: 3.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1155 KKINEIENLKNELKNKELTLEHMETERLELAQKlnenyEEVKSITKERKVLKElqkSFETERDHLRGYIREIEATGLQTK 1234
Cdd:pfam09731 121 KSEQEKEKALEEVLKEAISKAESATAVAKEAKD-----DAIQAVKAHTDSLKE---ASDTAEISREKATDSALQKAEALA 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1235 EELKIAHIHLKEHQET-----IDELRRSVSEKTAQIINTQDLEKSHTKLQEEIPVLHEEQELLPNVkEVSETQETMNELE 1309
Cdd:pfam09731 193 EKLKEVINLAKQSEEEaapplLDAAPETPPKLPEHLDNVEEKVEKAQSLAKLVDQYKELVASERIV-FQQELVSIFPDII 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1310 L----LTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIKsltkerdnlKTIKEALEVKHDQLKEHIRETLAKIQESQSK 1385
Cdd:pfam09731 272 PvlkeDNLLSNDDLNSLIAHAHREIDQLSKKLAELKKREE---------KHIERALEKQKEELDKLAEELSARLEEVRAA 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1386 QEQSLNmKEKDNETTKIVSEMEQfkpkdsaLLRIEIEmlglskRLQESHDEmksvakekddlqRLQEVLQSESDQLKENI 1465
Cdd:pfam09731 343 DEAQLR-LEFEREREEIRESYEE-------KLRTELE------RQAEAHEE------------HLKDVLVEQEIELQREF 396
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 767930923 1466 KEIVAKHLETEEELkvahcclkeQEETINELRVNLSEKETEISTIqKQLEAINDKLQ 1522
Cdd:pfam09731 397 LQDIKEKVEEERAG---------RLLKLNELLANLKGLEKATSSH-SEVEDENRKAQ 443
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
828-948 |
4.25e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 42.64 E-value: 4.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 828 DFEQKYKMVLEEN-------ERMNQEIVNLSKEAqkfdSSLGALKTELSYKTQELQEKTREVQERLNE-------MEQLK 893
Cdd:PRK04863 541 EFCKRLGKNLDDEdeleqlqEELEARLESLSESV----SEARERRMALRQQLEQLQARIQRLAARAPAwlaaqdaLARLR 616
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 767930923 894 EQLENRDSTLQTVerektliTEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQL 948
Cdd:PRK04863 617 EQSGEEFEDSQDV-------TEYMQQLLERERELTVERDELAARKQALDEEIERL 664
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
313-941 |
4.78e-03 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 42.58 E-value: 4.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 313 FDETLTALQFASTAKYMKN-----TPYVNEVSTDEALLKRYRKEIMDLKKQLEEVsletraQAMEKDQLAQLLEEKDLLQ 387
Cdd:PRK01156 155 LDEILEINSLERNYDKLKDvidmlRAEISNIDYLEEKLKSSNLELENIKKQIADD------EKSHSITLKEIERLSIEYN 228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 388 KVQNEKI---ENLTRMLVTSSSLTLQQELKAKRKRRVTWCLGKINKMKNSnyadqfniptnitTKTHKLSINLLREIDES 464
Cdd:PRK01156 229 NAMDDYNnlkSALNELSSLEDMKNRYESEIKTAESDLSMELEKNNYYKEL-------------EERHMKIINDPVYKNRN 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 465 VCSESDVFSNTLDTLSEIewnpatkllnQENIESELNSlradYDNLVLDYEQLRTEKEEMELKLKEKNDLDEfEALERKT 544
Cdd:PRK01156 296 YINDYFKYKNDIENKKQI----------LSNIDAEINK----YHAIIKKLSVLQKDYNDYIKKKSRYDDLNN-QILELEG 360
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 545 KKDQEMQLIHEISNLKNLVKHAEVYNQDLENELSSKVELLREKEDQIKKLQEYIDSqKLENIKMDLSYSLESIEDPKQMK 624
Cdd:PRK01156 361 YEMDYNSYLKSIESLKKKIEEYSKNIERMSAFISEILKIQEIDPDAIKKELNEINV-KLQDISSKVSSLNQRIRALRENL 439
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 625 QTLfdAETVALDAKRESAFLRSENLElKEKMKELATTYKQMENDIQlyqsqlEAKKKMQVDLEKELQSAFNEITKLTSLI 704
Cdd:PRK01156 440 DEL--SRNMEMLNGQSVCPVCGTTLG-EEKSNHIINHYNEKKSRLE------EKIREIEIEVKDIDEKIVDLKKRKEYLE 510
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 705 DGKVPKDLLCNLELEGKITDLQKELNKEVEENEALREEVILLSELKSLPSEVERLRKE------IQDKSEELHIITSEKD 778
Cdd:PRK01156 511 SEEINKSINEYNKIESARADLEDIKIKINELKDKHDKYEEIKNRYKSLKLEDLDSKRTswlnalAVISLIDIETNRSRSN 590
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 779 KLFSEVVHKESRVQGLLEEIgktKDDLATTQSNYKSTDQEFQNFKTLHMDFEQKYKMVleenERMNQEIVNLSKEAQKFD 858
Cdd:PRK01156 591 EIKKQLNDLESRLQEIEIGF---PDDKSYIDKSIREIENEANNLNNKYNEIQENKILI----EKLRGKIDNYKKQIAEID 663
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 859 SSLGALKtELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQ 938
Cdd:PRK01156 664 SIIPDLK-EITSRINDIEDNLKKSRKALDDAKANRARLESTIEILRTRINELSDRINDINETLESMKKIKKAIGDLKRLR 742
|
...
gi 767930923 939 ESL 941
Cdd:PRK01156 743 EAF 745
|
|
| PTZ00440 |
PTZ00440 |
reticulocyte binding protein 2-like protein; Provisional |
501-1837 |
5.39e-03 |
|
reticulocyte binding protein 2-like protein; Provisional
Pssm-ID: 240419 [Multi-domain] Cd Length: 2722 Bit Score: 42.51 E-value: 5.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 501 NSLRADYDNLVLDYEQLRTEKEEMELKLKEKNDLDEFEALERKTKKDQEMQLIHEISNLKNLVKHAEVYNQDL------- 573
Cdd:PTZ00440 183 NVRKTLYDEKFNEYKNKKEAFYNCLKNKKEDYDKKIKKINNEIRKLLKNIKCTGNMCKTDTYVDMVELYLLRVnevpsnn 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 574 -ENELSSKVELLREKEDQIKKLQEYIDSQK----------------------LENIKMDLSY--SLESIEDPKQMKQT-- 626
Cdd:PTZ00440 263 yDNYLNRAKELLESGSDLINKIKKELGDNKtiysinfiqeeigdiikrynfhLKKIEKGKEYikRIQNNNIPPQVKKDel 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 627 ---LFDAETVALDAKRESAFLRSENLELKEKMKELATTYKQMENDIQ------LYQSQLEAKKKMQVDLEKELQSAFNEI 697
Cdd:PTZ00440 343 kkkYFESAKHYASFKFSLEMLSMLDSLLIKKEKILNNLFNKLFGDLKekietlLDSEYFISKYTNIISLSEHTLKAAEDV 422
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 698 TKLTSlidgKVPKDLLCNLELEgkITDLQKELNKEVEE-NEALREEVILLSELKSLPSEVERLRKEIQDKSEELHIITSE 776
Cdd:PTZ00440 423 LKENS----QKIADYALYSNLE--IIEIKKKYDEKINElKKSINQLKTLISIMKSFYDLIISEKDSMDSKEKKESSDSNY 496
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 777 KDKlfsevvhkesrVQGLLEEIGKTKDDLATTQSNYKSTDQEFQNFKTLHMDFEQKYKMVleenERMNQEIVNLSKEAQK 856
Cdd:PTZ00440 497 QEK-----------VDELLQIINSIKEKNNIVNNNFKNIEDYYITIEGLKNEIEGLIELI----KYYLQSIETLIKDEKL 561
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 857 FDSslgaLKTELSYKTQELQEKTrevqERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDlKQ 936
Cdd:PTZ00440 562 KRS----MKNDIKNKIKYIEENV----DHIKDIISLNDEIDNIIQQIEELINEALFNKEKFINEKNDLQEKVKYILN-KF 632
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 937 LQESLQIERDQLKSDIHDTVNM--NIDTQEQLRNALESLKQHQETINTLKSKISEEVSRNLHME-ENTGETKDEFQQKMV 1013
Cdd:PTZ00440 633 YKGDLQELLDELSHFLDDHKYLyhEAKSKEDLQTLLNTSKNEYEKLEFMKSDNIDNIIKNLKKElQNLLSLKENIIKKQL 712
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1014 GIDKKQDLEAKNTQTLTADVKDNEIIEQQRKIFSLIQEKNELQQMLESVIAEKEQLKTDLKE----------------NI 1077
Cdd:PTZ00440 713 NNIEQDISNSLNQYTIKYNDLKSSIEEYKEEEEKLEVYKHQIINRKNEFILHLYENDKDLPDgkntyeeflqykdtilNK 792
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1078 EMTIENQ-----EELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEE--KLKEKSQQLQEKQQQLLNVQEEM 1150
Cdd:PTZ00440 793 ENKISNDinilkENKKNNQDLLNSYNILIQKLEAHTEKNDEELKQLLQKFPTEDEnlNLKELEKEFNENNQIVDNIIKDI 872
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1151 SEMQKKINEIENLKNELK---NKELTLEHMETERLELAQKLNENYEEVKS---ITKERK-----VLKELQKSFETE---- 1215
Cdd:PTZ00440 873 ENMNKNINIIKTLNIAINrsnSNKQLVEHLLNNKIDLKNKLEQHMKIINTdniIQKNEKlnllnNLNKEKEKIEKQlsdt 952
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1216 ---------------RDHLRGYIREIEATGLQTKEELKIAHIHLKEHQETIDELRRSVSEKTAQIINTQDLE-------- 1272
Cdd:PTZ00440 953 kinnlkmqiektleyYDKSKENINGNDGTHLEKLDKEKDEWEHFKSEIDKLNVNYNILNKKIDDLIKKQHDDiielidkl 1032
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1273 ------KSHTKLQEEIPVLHEEQELLP-----NVKEVSETQETMNELELLTEQSTT---KDSTTLARIEMERLRLNEKFQ 1338
Cdd:PTZ00440 1033 ikekgkEIEEKVDQYISLLEKMKTKLSsfhfnIDIKKYKNPKIKEEIKLLEEKVEAllkKIDENKNKLIEIKNKSHEHVV 1112
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1339 ESQEEIKSLT----KERDNLKTIKEALEVKHDQL--KEHIRETLAKIQESQSKQEQSL------NMKEKDNETTKIVSEM 1406
Cdd:PTZ00440 1113 NADKEKNKQTehynKKKKSLEKIYKQMEKTLKELenMNLEDITLNEVNEIEIEYERILidhiveQINNEAKKSKTIMEEI 1192
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1407 EQFKPKdsallrIEIEMLGLSKRLQESHDEMKsvakekddlqrlQEVLQSESDQLKENIKEIVaKHLETEEELKVAHCCL 1486
Cdd:PTZ00440 1193 ESYKKD------IDQVKKNMSKERNDHLTTFE------------YNAYYDKATASYENIEELT-TEAKGLKGEANRSTNV 1253
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1487 KEQEETINELRVNLSEKETEISTIQKQLEAINDK----LQNKIQEI-------------YEKEEQFNIKQISEVQEKV-N 1548
Cdd:PTZ00440 1254 DELKEIKLQVFSYLQQVIKENNKMENALHEIKNMyeflISIDSEKIlkeilnstkkaeeFSNDAKKELEKTDNLIKQVeA 1333
|
1210 1220 1230 1240 1250 1260 1270 1280
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1549 ELKQFKEHRKAKDSAL---------QSIESKMLELTNRLQESQEEIQIMIKEKEemKRVQEALQIERDQLKENTKEIVAK 1619
Cdd:PTZ00440 1334 KIEQAKEHKNKIYGSLedkqiddeiKKIEQIKEEISNKRKEINKYLSNIKSNKE--KCDLHVRNASRGKDKIDFLNKHEA 1411
|
1290 1300 1310 1320 1330 1340 1350 1360
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1620 MKESQEKEYQFLKMT-AVNETQEKMCEIEHLKEQFETQKLNLENIETEnirLTQILHENL---------EEMRSVTKERD 1689
Cdd:PTZ00440 1412 IEPSNSKEVNIIKITdNINKCKQYSNEAMETENKADENNDSIIKYEKE---ITNILNNSSilgkktkleKKKKEATNIMD 1488
|
1370 1380 1390 1400 1410 1420 1430 1440
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1690 DLRSVEETLKVERDQLKENLRETITRDLEKQEELKIVHMHLKEHQETIDKLRGIVSEKTNEISNMQKDLEhsNDALKAQD 1769
Cdd:PTZ00440 1489 DINGEHSIIKTKLTKSSEKLNQLNEQPNIKREGDVLNNDKSTIAYETIQYNLGRVKHNLLNILNIKDEIE--TILNKAQD 1566
|
1450 1460 1470 1480 1490 1500 1510
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 767930923 1770 LkiqeELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNA---KLQEKIQELKANEHQLITLKK 1837
Cdd:PTZ00440 1567 L----MRDISKISKIVENKNLENLNDKEADYVKYLDNILKEKQLMEAeykKLNEIYSDVDNIEKELKKHKK 1633
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
556-931 |
5.50e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 42.03 E-value: 5.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 556 ISNLKNLVKHAEVYNQDLENELSSKVELLREKEDQIKKLQEYIDSQKLE------NIKMDLSYSLESIEDPKQMKQTLFD 629
Cdd:pfam17380 271 LNQLLHIVQHQKAVSERQQQEKFEKMEQERLRQEKEEKAREVERRRKLEeaekarQAEMDRQAAIYAEQERMAMEREREL 350
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 630 AETVALDAKRESAFLRSENLELK-EKMKELATTYKQMENDIQLYQSQLEAKKKMQVdLEKELQSafneitkltslidgkv 708
Cdd:pfam17380 351 ERIRQEERKRELERIRQEEIAMEiSRMRELERLQMERQQKNERVRQELEAARKVKI-LEEERQR---------------- 413
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 709 pkdllcnlelegKITDLQKELNK-EVEENEALREEVILLSELKSlpSEVERLRKEIQDKSEELHII--TSEKDKLFSEVV 785
Cdd:pfam17380 414 ------------KIQQQKVEMEQiRAEQEEARQREVRRLEEERA--REMERVRLEEQERQQQVERLrqQEEERKRKKLEL 479
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 786 HKESRVQGLLEEIgktkddlattqsNYKSTDQEFQNFKTLHMDFEQKYKMVLEENERMNQEIVnlskeaqkfdsslgalK 865
Cdd:pfam17380 480 EKEKRDRKRAEEQ------------RRKILEKELEERKQAMIEEERKRKLLEKEMEERQKAIY----------------E 531
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 767930923 866 TELSYKTQELQEKTREVQERLNEMEQLKEQLENRdSTLQTVEREKTLI-----TEKLQQTLEEVKTLTQEK 931
Cdd:pfam17380 532 EERRREAEEERRKQQEMEERRRIQEQMRKATEER-SRLEAMEREREMMrqiveSEKARAEYEATTPITTIK 601
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
493-702 |
5.62e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 41.74 E-value: 5.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 493 QENIESELNSLRADYDNLVLDYEQLRTEKEEMELKLKEKNdlDEFEALERKTKKDQEmqliheisNLKNLVKHAevYNQD 572
Cdd:COG3883 32 LEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQ--AEIAEAEAEIEERRE--------ELGERARAL--YRSG 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 573 lenELSSKVELLREKEDqikkLQEYIDsqKLENIKMDLSYSLESIEDPKQMKQTLFDAETVALDAKREsafLRSENLELK 652
Cdd:COG3883 100 ---GSVSYLDVLLGSES----FSDFLD--RLSALSKIADADADLLEELKADKAELEAKKAELEAKLAE---LEALKAELE 167
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 767930923 653 EKMKELATTYKQMENDIQLYQSQLEAKKKMQVDLEKELQSAFNEITKLTS 702
Cdd:COG3883 168 AAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAA 217
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
1327-1609 |
5.76e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 41.92 E-value: 5.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1327 EMERLrLNEKFQESQEEIKSLTKERDNlktIKEALEVKHDQLKEhiretlakiQESQSKQeqslNMKEKDNETTKIVSEM 1406
Cdd:PHA02562 167 EMDKL-NKDKIRELNQQIQTLDMKIDH---IQQQIKTYNKNIEE---------QRKKNGE----NIARKQNKYDELVEEA 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1407 EQFKPkdsallriEIEMLglskrlqesHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIvAKHLETEEELKVAHCCL 1486
Cdd:PHA02562 230 KTIKA--------EIEEL---------TDELLNLVMDIEDPSAALNKLNTAAAKIKSKIEQF-QKVIKMYEKGGVCPTCT 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1487 KEQEETINELrvnlSEKETEISTIQKQLEAINDKlqnkIQEIYEKEEQFNiKQISEVQEKVNELKQFKEHRKAKDSALQS 1566
Cdd:PHA02562 292 QQISEGPDRI----TKIKDKLKELQHSLEKLDTA----IDELEEIMDEFN-EQSKKLLELKNKISTNKQSLITLVDKAKK 362
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 767930923 1567 IESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQL 1609
Cdd:PHA02562 363 VKAAIEELQAEFVDNAEELAKLQDELDKIVKTKSELVKEKYHR 405
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
511-1165 |
6.37e-03 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 41.88 E-value: 6.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 511 VLDYEQLRTEKEEMELKLKEKNDLDEFEALERKTKKDQEM-QLIHEISNLKNLVKHAEVYNQDLENE-----LSSKVELL 584
Cdd:TIGR00618 223 VLEKELKHLREALQQTQQSHAYLTQKREAQEEQLKKQQLLkQLRARIEELRAQEAVLEETQERINRArkaapLAAHIKAV 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 585 REKEDQIKKLQEYIDSQKLENIKMDLSYSL-----ESIEDPKQMKQTLFDAETVALDAKRESAFLR---SENLELKEKMK 656
Cdd:TIGR00618 303 TQIEQQAQRIHTELQSKMRSRAKLLMKRAAhvkqqSSIEEQRRLLQTLHSQEIHIRDAHEVATSIReisCQQHTLTQHIH 382
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 657 ELATTYKQMENDIQLYQSQLEAKKKMQVDLEKELQSAFNEITKLTSLIDGKVPK---DLLCNLELEGKITDLQKELNKEV 733
Cdd:TIGR00618 383 TLQQQKTTLTQKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQqryAELCAAAITCTAQCEKLEKIHLQ 462
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 734 EENEALREEVILLSELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHK----------ESRVQGLLEEIGKTKD 803
Cdd:TIGR00618 463 ESAQSLKEREQQLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPArqdidnpgplTRRMQRGEQTYAQLET 542
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 804 DLATTQSNYKSTDQEFQNFKTLHMDFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQ 883
Cdd:TIGR00618 543 SEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHALLRKLQ 622
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 884 ERLNEME--QLKEQLENRDSTLQTV--EREKTLITEKLQQTLEEVKTLTQEKDDLKQLQES-LQIERDQLKSDIHDTVNM 958
Cdd:TIGR00618 623 PEQDLQDvrLHLQQCSQELALKLTAlhALQLTLTQERVREHALSIRVLPKELLASRQLALQkMQSEKEQLTYWKEMLAQC 702
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 959 NIDTQEQLRNALESLKQHQETINTLKSKISEEVSRNLHMEENTGETKDEFQQKmvgidkkqdleakntqtLTADVKDNEI 1038
Cdd:TIGR00618 703 QTLLRELETHIEEYDREFNEIENASSSLGSDLAAREDALNQSLKELMHQARTV-----------------LKARTEAHFN 765
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1039 IEQQRKIfsLIQEKNELQQMLESVIAEKEQLKTDLKENIEMTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRT 1118
Cdd:TIGR00618 766 NNEEVTA--ALQTGAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSAT 843
|
650 660 670 680
....*....|....*....|....*....|....*....|....*..
gi 767930923 1119 CDRLAEVEEKLKEKSQQLQEKQQQllnvQEEMSEMQKKINEIENLKN 1165
Cdd:TIGR00618 844 LGEITHQLLKYEECSKQLAQLTQE----QAKIIQLSDKLNGINQIKI 886
|
|
| PRK00409 |
PRK00409 |
recombination and DNA strand exchange inhibitor protein; Reviewed |
1787-1937 |
6.81e-03 |
|
recombination and DNA strand exchange inhibitor protein; Reviewed
Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 41.74 E-value: 6.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1787 QETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQLKKQikdqsltlskl 1866
Cdd:PRK00409 501 ENIIEEAKKLIGEDKEKLNELIASLEELERELEQKAEEAEALLKEAEKLKEELEEKKEKLQEEEDKLLE----------- 569
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 767930923 1867 eienlNLAQKLHENLEEMKSVmkerdnlrrVEETLKLERDQLKESLQETKARDL-EIQQELKTARMLSKEHK 1937
Cdd:PRK00409 570 -----EAEKEAQQAIKEAKKE---------ADEIIKELRQLQKGGYASVKAHELiEARKRLNKANEKKEKKK 627
|
|
| PLN03229 |
PLN03229 |
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional |
1454-1771 |
6.84e-03 |
|
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional
Pssm-ID: 178768 [Multi-domain] Cd Length: 762 Bit Score: 41.76 E-value: 6.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1454 LQSESDQLKENIKEivAKHLETE-EELKVAHCCLKEQEETINE---------LRVNLSEKETEISTIQKQLEAINDKLQN 1523
Cdd:PLN03229 434 LEGEVEKLKEQILK--AKESSSKpSELALNEMIEKLKKEIDLEyteaviamgLQERLENLREEFSKANSQDQLMHPVLME 511
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1524 KIQEIyekEEQFNiKQISE------VQEKVNELKQFKEHRKAKDSALQSIESKmLELTNRLQESQEEIQImikeKEEMKR 1597
Cdd:PLN03229 512 KIEKL---KDEFN-KRLSRapnylsLKYKLDMLNEFSRAKALSEKKSKAEKLK-AEINKKFKEVMDRPEI----KEKMEA 582
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1598 VQEALQIER----DQLKENTKEIVAKMKESQEKEY---------QFLKMTAVNETQEKMCEIEHLKEQFEtqKLNLE-NI 1663
Cdd:PLN03229 583 LKAEVASSGassgDELDDDLKEKVEKMKKEIELELagvlksmglEVIGVTKKNKDTAEQTPPPNLQEKIE--SLNEEiNK 660
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1664 ETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERdqLKENLRETITRDLEKQEelkivhmhLKEHQETIDKlrgi 1743
Cdd:PLN03229 661 KIERVIRSSDLKSKIELLKLEVAKASKTPDVTEKEKIEA--LEQQIKQKIAEALNSSE--------LKEKFEELEA---- 726
|
330 340
....*....|....*....|....*...
gi 767930923 1744 vsektnEISNMQKDLEHSNDALKAQDLK 1771
Cdd:PLN03229 727 ------ELAAARETAAESNGSLKNDDDK 748
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
744-1100 |
7.11e-03 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 41.96 E-value: 7.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 744 ILLSELKSLPSEVERLRKEIQDKsEELHIITSEKDKLFSEVVHKesrVQGLLEEIGKTKDDLATTQSNYKSTDqefqNFK 823
Cdd:PRK10929 7 FLMAWLLSWGAYAATAPDEKQIT-QELEQAKAAKTPAQAEIVEA---LQSALNWLEERKGSLERAKQYQQVID----NFP 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 824 TLHMDFEQKyKMVLEENER---MNQEIVNLSKEAQKFDSSLgalkTELSYKTQELQEKTREVQERLNEMEQL----KEQL 896
Cdd:PRK10929 79 KLSAELRQQ-LNNERDEPRsvpPNMSTDALEQEILQVSSQL----LEKSRQAQQEQDRAREISDSLSQLPQQqteaRRQL 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 897 ENRDSTLQTVEREKTLITE---KLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIHDTVNMNIDTQ-EQLRNALES 972
Cdd:PRK10929 154 NEIERRLQTLGTPNTPLAQaqlTALQAESAALKALVDELELAQLSANNRQELARLRSELAKKRSQQLDAYlQALRNQLNS 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 973 LKQhQETINTLKS--KISEE-------VSRNLHMEENTGETKDEFQQKMVGIDKKQDLEAKNT----QTLtadvkdNEII 1039
Cdd:PRK10929 234 QRQ-REAERALESteLLAEQsgdlpksIVAQFKINRELSQALNQQAQRMDLIASQQRQAASQTlqvrQAL------NTLR 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1040 EQQ-------------RKIFSLIQEKNELQQmLESVIA-------------EKEQLKTDLKENIEMTIENQEElRLLGDE 1093
Cdd:PRK10929 307 EQSqwlgvsnalgealRAQVARLPEMPKPQQ-LDTEMAqlrvqrlryedllNKQPQLRQIRQADGQPLTAEQN-RILDAQ 384
|
....*..
gi 767930923 1094 LKKQQEI 1100
Cdd:PRK10929 385 LRTQREL 391
|
|
| ATG17_like |
pfam04108 |
Autophagy protein ATG17-like domain; This domain is found in the autophagy-related proteins ... |
1345-1553 |
7.30e-03 |
|
Autophagy protein ATG17-like domain; This domain is found in the autophagy-related proteins ATG17 and ATG11, conserved across eukaryotes. ATG17 forms a complex with ATG29 and ATG31, critical for both PAS (preautophagosomal structure) formation and autophagy. Together with ATG13, it is required for ATG1 kinase activation. ATG11 is a scaffold protein required for the cytoplasm-to-vacuole targeting (Cvt) pathway during starvation and to recruit ATG proteins to the pre-autophagosome. It is also required for ATG1 kinase activation. In many eukaryotes, ATG11 (the orthologue in mammals is RB1-inducible coiled-coil protein 1 (RB1CC1) and in S. pombe is Taz1-interacting factor 1 (taf1)) is essential for bulk autophagy, except in S.cerevisiae. ATG17 and ATG11 are large similar proteins, both predicted to be almost entirely helical, containing conserved coiled-coil regions and lack obvious functional motifs.
Pssm-ID: 427715 [Multi-domain] Cd Length: 360 Bit Score: 41.22 E-value: 7.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1345 KSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQSLNMKEKDNETTKIVSEMEQfkpkdsallrIEIEML 1424
Cdd:pfam04108 112 DSVEILRDALKELIDELQAAQESLDSDLKRFDDDLRDLQKELESLSSPSESISLIPTLLKELES----------LEEEMA 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1425 GLSKRLQESHDE-MKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNLSek 1503
Cdd:pfam04108 182 SLLESLTNHYDQcVTAVKLTEGGRAEMLEVLENDARELDDVVPELQDRLDEMENNYERLQKLLEQKNSLIDELLSALQ-- 259
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 767930923 1504 etEISTIQKQLEAINDKLQnKIQEIYEKEEQFNIKQISEVQEKVNELKQF 1553
Cdd:pfam04108 260 --LIAEIQSRLPEYLAALK-EFEERWEEEKETIEDYLSELEDLREFYEGF 306
|
|
| COG1340 |
COG1340 |
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]; |
1679-1953 |
7.38e-03 |
|
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown];
Pssm-ID: 440951 [Multi-domain] Cd Length: 297 Bit Score: 41.05 E-value: 7.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1679 EEMRSVTKERDDLRSVEETLKVERDQLKENLRETITRDLEKQEELKIVHMHLKEHQETIDKLRGIVSEKTNEISNMQKDL 1758
Cdd:COG1340 8 SSLEELEEKIEELREEIEELKEKRDELNEELKELAEKRDELNAQVKELREEAQELREKRDELNEKVKELKEERDELNEKL 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1759 EHSNDALKAQDlKIQEELRIAHMHLKEQQETIDKLrgivsEKTDKLSNMQKDLENsnaKLQEKIQELKanehQLITLKKD 1838
Cdd:COG1340 88 NELREELDELR-KELAELNKAGGSIDKLRKEIERL-----EWRQQTEVLSPEEEK---ELVEKIKELE----KELEKAKK 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1839 VNETQKKVSEMEQLKKQIKDQSLTLSKLEIENLNLAQKLHenlEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKAR 1918
Cdd:COG1340 155 ALEKNEKLKELRAELKELRKEAEEIHKKIKELAEEAQELH---EEMIELYKEADELRKEADELHKEIVEAQEKADELHEE 231
|
250 260 270
....*....|....*....|....*....|....*
gi 767930923 1919 DLEIQQELKTARMLSKEHKETVDKLREKISEKTIQ 1953
Cdd:COG1340 232 IIELQKELRELRKELKKLRKKQRALKREKEKEELE 266
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
837-948 |
7.68e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 41.86 E-value: 7.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 837 LEENERMNQEIVNLSKE-----AQKFDSS--LGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVE-- 907
Cdd:COG3096 524 LEQRLRQQQNAERLLEEfcqriGQQLDAAeeLEELLAELEAQLEELEEQAAEAVEQRSELRQQLEQLRARIKELAARApa 603
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 908 -----------REKT--------LITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQL 948
Cdd:COG3096 604 wlaaqdalerlREQSgealadsqEVTAAMQQLLEREREATVERDELAARKQALESQIERL 663
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
1326-1543 |
8.80e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 41.45 E-value: 8.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1326 IEMERLR-LNEKFQESQEEIKSLTKERDNLKTIKEALEV----KHDQLKEHIRETLAKIQESQSKQEQSLNmkEKDNETT 1400
Cdd:PRK05771 40 LSNERLRkLRSLLTKLSEALDKLRSYLPKLNPLREEKKKvsvkSLEELIKDVEEELEKIEKEIKELEEEIS--ELENEIK 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1401 KIVSEMEQFKP-KDsalLRIEIEMLGLSKRLQ--------------ESHDEMKSVAKEKDDLQRLQEVLQSESDQLKEnI 1465
Cdd:PRK05771 118 ELEQEIERLEPwGN---FDLDLSLLLGFKYVSvfvgtvpedkleelKLESDVENVEYISTDKGYVYVVVVVLKELSDE-V 193
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 767930923 1466 KEIVAKHLETEEELKVahccLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEqfNIKQISEV 1543
Cdd:PRK05771 194 EEELKKLGFERLELEE----EGTPSELIREIKEELEEIEKERESLLEELKELAKKYLEELLALYEYLE--IELERAEA 265
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
1501-1626 |
9.07e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 41.30 E-value: 9.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1501 SEKETEISTIQKQLEAiNDKLQNKIQEIyekEEQFNIKQiSEVQEKVNELKQFKEHRKAKDSALQSIESKMLELTNRLQE 1580
Cdd:PRK12704 47 AKKEAEAIKKEALLEA-KEEIHKLRNEF---EKELRERR-NELQKLEKRLLQKEENLDRKLELLEKREEELEKKEKELEQ 121
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1581 SQEEIQIMIKEKEEMKRVQ-------------EALQIERDQLKENTK-EIVAKMKESQEK 1626
Cdd:PRK12704 122 KQQELEKKEEELEELIEEQlqelerisgltaeEAKEILLEKVEEEARhEAAVLIKEIEEE 181
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
873-1161 |
9.81e-03 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 41.43 E-value: 9.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 873 QELQEKTREVQERLNEMEQLKE-QLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSD 951
Cdd:PLN02939 106 EAIAAIDNEQQTNSKDGEQLSDfQLEDLVGMIQNAEKNILLLNQARLQALEDLEKILTEKEALQGKINILEMRLSETDAR 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 952 IHDTVNMNIDTQ---EQLRNALESLKQHQETINTLKSKISEEVSrnLHMEENtgetkdefqqkmvgIDKKQDLEAKNTQT 1028
Cdd:PLN02939 186 IKLAAQEKIHVEileEQLEKLRNELLIRGATEGLCVHSLSKELD--VLKEEN--------------MLLKDDIQFLKAEL 249
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 1029 LtadvkdnEIIEQQRKIFSLIQEKNELQ---QMLES--VIAEKEQLKTDLKEnIEMTIENQEELRLLGDELKKQQE--IV 1101
Cdd:PLN02939 250 I-------EVAETEERVFKLEKERSLLDaslRELESkfIVAQEDVSKLSPLQ-YDCWWEKVENLQDLLDRATNQVEkaAL 321
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 767930923 1102 AQEKNHAIKkegelsrtcDRLAEVEEKLKEksqqlqekqqqlLNVQEEMSE----MQKKINEIE 1161
Cdd:PLN02939 322 VLDQNQDLR---------DKVDKLEASLKE------------ANVSKFSSYkvelLQQKLKLLE 364
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
579-915 |
9.91e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 41.45 E-value: 9.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 579 SKVELL---REKEDQIKKLQEyidSQKLEnikmdlsyslesIEDPKQMKQTLF--DAETVALDAKRESAFLRSEnLELKE 653
Cdd:PRK05771 7 KKVLIVtlkSYKDEVLEALHE---LGVVH------------IEDLKEELSNERlrKLRSLLTKLSEALDKLRSY-LPKLN 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 654 KMKELATTYKqmendiqlYQSQLEAKKkmqvDLEKELQSAFNEITKLTSLIDgkvpkdllcnlELEGKITDLQKELNkev 733
Cdd:PRK05771 71 PLREEKKKVS--------VKSLEELIK----DVEEELEKIEKEIKELEEEIS-----------ELENEIKELEQEIE--- 124
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 734 eenealreeviLLSELKSLPSEVERLRkeiqdKSEELHIITSEKDKLFSEVVHKESrVQGLLEEIGKTKDD----LATTQ 809
Cdd:PRK05771 125 -----------RLEPWGNFDLDLSLLL-----GFKYVSVFVGTVPEDKLEELKLES-DVENVEYISTDKGYvyvvVVVLK 187
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930923 810 SNYKSTDQEFQNFktlhmDFEqkyKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQErlnEM 889
Cdd:PRK05771 188 ELSDEVEEELKKL-----GFE---RLELEEEGTPSELIREIKEELEEIEKERESLLEELKELAKKYLEELLALYE---YL 256
|
330 340
....*....|....*....|....*.
gi 767930923 890 EQLKEQLEnrdSTLQTVEREKTLITE 915
Cdd:PRK05771 257 EIELERAE---ALSKFLKTDKTFAIE 279
|
|
| |
