|
Name |
Accession |
Description |
Interval |
E-value |
| KISc_CENP_E |
cd01374 |
Kinesin motor domain, CENP-E/KIP2-like subgroup; Kinesin motor domain, CENP-E/KIP2-like ... |
6-329 |
3.57e-171 |
|
Kinesin motor domain, CENP-E/KIP2-like subgroup; Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.
Pssm-ID: 276825 [Multi-domain] Cd Length: 321 Bit Score: 528.83 E-value: 3.57e-171
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 6 AVAVCVRVRPLNSREESLGEtaQVYWKTDNNVIYQVD-GSKSFNFDRVFHGNETTKNVYEEIAAPIIDSAIQGYNGTIFA 84
Cdd:cd01374 1 KITVTVRVRPLNSREIGINE--QVAWEIDNDTIYLVEpPSTSFTFDHVFGGDSTNREVYELIAKPVVKSALEGYNGTIFA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 85 YGQTASGKTYTMMGSEDHLGVIPRAIHDIFQKIKKFPDREFLLRVSYMEIYNETITDLLCGTqkMKPLIIREDVNRNVYV 164
Cdd:cd01374 79 YGQTSSGKTFTMSGDEDEPGIIPLAIRDIFSKIQDTPDREFLLRVSYLEIYNEKINDLLSPT--SQNLKIRDDVEKGVYV 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 165 ADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGEPsnCEGSVKVSHLNLVDLAGSERAAQ 244
Cdd:cd01374 157 AGLTEEIVSSPEHALSLIARGEKNRHVGETDMNERSSRSHTIFRITIESSERGEL--EEGTVRVSTLNLIDLAGSERAAQ 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 245 TGAAGVRLKEGCNINRSLFILGQVIKKLSDGQVGGFINYRDSKLTRILQNSLGGNAKTRIICTITPVS--FDETLTALQF 322
Cdd:cd01374 235 TGAAGVRRKEGSHINKSLLTLGTVISKLSEGKVGGHIPYRDSKLTRILQPSLGGNSRTAIICTITPAEshVEETLNTLKF 314
|
....*..
gi 767930917 323 ASTAKYM 329
Cdd:cd01374 315 ASRAKKI 321
|
|
| KISc |
smart00129 |
Kinesin motor, catalytic domain. ATPase; Microtubule-dependent molecular motors that play ... |
6-336 |
4.20e-143 |
|
Kinesin motor, catalytic domain. ATPase; Microtubule-dependent molecular motors that play important roles in intracellular transport of organelles and in cell division.
Pssm-ID: 214526 [Multi-domain] Cd Length: 335 Bit Score: 449.33 E-value: 4.20e-143
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 6 AVAVCVRVRPLNSREESLGETAQVYW------KTDNNVIYQVDGSKSFNFDRVFHGNETTKNVYEEIAAPIIDSAIQGYN 79
Cdd:smart00129 1 NIRVVVRVRPLNKREKSRKSPSVVPFpdkvgkTLTVRSPKNRQGEKKFTFDKVFDATASQEDVFEETAAPLVDSVLEGYN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 80 GTIFAYGQTASGKTYTMMGSEDHLGVIPRAIHDIFQKIKKF-PDREFLLRVSYMEIYNETITDLLCGTQKmkPLIIREDV 158
Cdd:smart00129 81 ATIFAYGQTGSGKTYTMIGTPDSPGIIPRALKDLFEKIDKReEGWQFSVKVSYLEIYNEKIRDLLNPSSK--KLEIREDE 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 159 NRNVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGEPSnceGSVKVSHLNLVDLAG 238
Cdd:smart00129 159 KGGVYVKGLTEISVSSFEEVYNLLEKGNKNRTVAATKMNEESSRSHAVFTITVEQKIKNSSS---GSGKASKLNLVDLAG 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 239 SERAAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDGQVGGFINYRDSKLTRILQNSLGGNAKTRIICTITP--VSFDET 316
Cdd:smart00129 236 SERAKKTGAEGDRLKEAGNINKSLSALGNVINALAQHSKSRHIPYRDSKLTRLLQDSLGGNSKTLMIANVSPssSNLEET 315
|
330 340
....*....|....*....|
gi 767930917 317 LTALQFASTAKYMKNTPYVN 336
Cdd:smart00129 316 LSTLRFASRAKEIKNKPIVN 335
|
|
| Kinesin |
pfam00225 |
Kinesin motor domain; |
12-327 |
8.11e-139 |
|
Kinesin motor domain;
Pssm-ID: 459720 [Multi-domain] Cd Length: 326 Bit Score: 437.00 E-value: 8.11e-139
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 12 RVRPLNSREESLGETAQVY------WKTDNNVIYQVDGSKSFNFDRVFHGNETTKNVYEEIAAPIIDSAIQGYNGTIFAY 85
Cdd:pfam00225 1 RVRPLNEREKERGSSVIVSvesvdsETVESSHLTNKNRTKTFTFDKVFDPEATQEDVYEETAKPLVESVLEGYNVTIFAY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 86 GQTASGKTYTMMGSEDHLGVIPRAIHDIFQKIKKFPDR-EFLLRVSYMEIYNETITDLLCGTQKMK-PLIIREDVNRNVY 163
Cdd:pfam00225 81 GQTGSGKTYTMEGSDEQPGIIPRALEDLFDRIQKTKERsEFSVKVSYLEIYNEKIRDLLSPSNKNKrKLRIREDPKKGVY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 164 VADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGEPSncEGSVKVSHLNLVDLAGSERAA 243
Cdd:pfam00225 161 VKGLTEVEVSSAEEVLELLQLGNKNRTVAATKMNEESSRSHAIFTITVEQRNRSTGG--EESVKTGKLNLVDLAGSERAS 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 244 QTGAA-GVRLKEGCNINRSLFILGQVIKKLSDGQvGGFINYRDSKLTRILQNSLGGNAKTRIICTITPVS--FDETLTAL 320
Cdd:pfam00225 239 KTGAAgGQRLKEAANINKSLSALGNVISALADKK-SKHIPYRDSKLTRLLQDSLGGNSKTLMIANISPSSsnYEETLSTL 317
|
....*..
gi 767930917 321 QFASTAK 327
Cdd:pfam00225 318 RFASRAK 324
|
|
| KISc |
cd00106 |
Kinesin motor domain; Kinesin motor domain. This catalytic (head) domain has ATPase activity ... |
6-327 |
1.21e-136 |
|
Kinesin motor domain; Kinesin motor domain. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type), in some its is found in the middle (M-type), or C-terminal (C-type). N-type and M-type kinesins are (+) end-directed motors, while C-type kinesins are (-) end-directed motors, i.e. they transport cargo towards the (-) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.
Pssm-ID: 276812 [Multi-domain] Cd Length: 326 Bit Score: 430.52 E-value: 1.21e-136
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 6 AVAVCVRVRPLNSREeslGETAQVYWKTDNNVIYQVD-------GSKSFNFDRVFHGNETTKNVYEEIAAPIIDSAIQGY 78
Cdd:cd00106 1 NVRVAVRVRPLNGRE---ARSAKSVISVDGGKSVVLDppknrvaPPKTFAFDAVFDSTSTQEEVYEGTAKPLVDSALEGY 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 79 NGTIFAYGQTASGKTYTMMGS-EDHLGVIPRAIHDIFQKIKKFP--DREFLLRVSYMEIYNETITDLLCGTQKmKPLIIR 155
Cdd:cd00106 78 NGTIFAYGQTGSGKTYTMLGPdPEQRGIIPRALEDIFERIDKRKetKSSFSVSASYLEIYNEKIYDLLSPVPK-KPLSLR 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 156 EDVNRNVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKgepSNCEGSVKVSHLNLVD 235
Cdd:cd00106 157 EDPKRGVYVKGLTEVEVGSLEDALELLDAGNKNRTTASTNMNEHSSRSHAVFTIHVKQRNR---EKSGESVTSSKLNLVD 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 236 LAGSERAAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDGQvGGFINYRDSKLTRILQNSLGGNAKTRIICTITP--VSF 313
Cdd:cd00106 234 LAGSERAKKTGAEGDRLKEGGNINKSLSALGKVISALADGQ-NKHIPYRDSKLTRLLQDSLGGNSKTIMIACISPssENF 312
|
330
....*....|....
gi 767930917 314 DETLTALQFASTAK 327
Cdd:cd00106 313 EETLSTLRFASRAK 326
|
|
| KISc_KIF4 |
cd01372 |
Kinesin motor domain, KIF4-like subfamily; Kinesin motor domain, KIF4-like subfamily. Members ... |
6-330 |
2.98e-106 |
|
Kinesin motor domain, KIF4-like subfamily; Kinesin motor domain, KIF4-like subfamily. Members of this group seem to perform a variety of functions, and have been implicated in neuronal organelle transport and chromosome segregation during mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.
Pssm-ID: 276823 [Multi-domain] Cd Length: 341 Bit Score: 343.93 E-value: 2.98e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 6 AVAVCVRVRPLNSREESLGETAQVYWkTDNNVIYQVDGSKSFNFDRVFHGNETTKNVYEEIAAPIIDSAIQGYNGTIFAY 85
Cdd:cd01372 2 SVRVAVRVRPLLPKEIIEGCRICVSF-VPGEPQVTVGTDKSFTFDYVFDPSTEQEEVYNTCVAPLVDGLFEGYNATVLAY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 86 GQTASGKTYTMMGS------EDHLGVIPRAIHDIFQKIKKFPDR-EFLLRVSYMEIYNETITDLLC-GTQKMKPLIIRED 157
Cdd:cd01372 81 GQTGSGKTYTMGTAytaeedEEQVGIIPRAIQHIFKKIEKKKDTfEFQLKVSFLEIYNEEIRDLLDpETDKKPTISIRED 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 158 VNRNVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGEPSNC-----EGSVKVSHLN 232
Cdd:cd01372 161 SKGGITIVGLTEVTVLSAEDMMSCLEQGSLSRTTASTAMNSQSSRSHAIFTITLEQTKKNGPIAPmsaddKNSTFTSKFH 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 233 LVDLAGSERAAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDGQ-VGGFINYRDSKLTRILQNSLGGNAKTRIICTITPV 311
Cdd:cd01372 241 FVDLAGSERLKRTGATGDRLKEGISINSGLLALGNVISALGDESkKGAHVPYRDSKLTRLLQDSLGGNSHTLMIACVSPA 320
|
330 340
....*....|....*....|.
gi 767930917 312 S--FDETLTALQFASTAKYMK 330
Cdd:cd01372 321 DsnFEETLNTLKYANRARNIK 341
|
|
| KISc_KIF3 |
cd01371 |
Kinesin motor domain, kinesins II or KIF3_like proteins; Kinesin motor domain, kinesins II or ... |
6-327 |
3.98e-100 |
|
Kinesin motor domain, kinesins II or KIF3_like proteins; Kinesin motor domain, kinesins II or KIF3_like proteins. Subgroup of kinesins, which form heterotrimers composed of 2 kinesins and one non-motor accessory subunit. Kinesins II play important roles in ciliary transport, and have been implicated in neuronal transport, melanosome transport, the secretory pathway, and mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In this group the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.
Pssm-ID: 276822 [Multi-domain] Cd Length: 334 Bit Score: 325.95 E-value: 3.98e-100
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 6 AVAVCVRVRPLNSREESLGETAQVYWKTDNNVIyQVDGS--------KSFNFDRVFHGNETTKNVYEEIAAPIIDSAIQG 77
Cdd:cd01371 2 NVKVVVRCRPLNGKEKAAGALQIVDVDEKRGQV-SVRNPkataneppKTFTFDAVFDPNSKQLDVYDETARPLVDSVLEG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 78 YNGTIFAYGQTASGKTYTMMG--SEDHL-GVIPRAIHDIFQKIKKFPD-REFLLRVSYMEIYNETITDLLcGTQKMKPLI 153
Cdd:cd01371 81 YNGTIFAYGQTGTGKTYTMEGkrEDPELrGIIPNSFAHIFGHIARSQNnQQFLVRVSYLEIYNEEIRDLL-GKDQTKRLE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 154 IREDVNRNVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGEPSncEGSVKVSHLNL 233
Cdd:cd01371 160 LKERPDTGVYVKDLSMFVVKNADEMEHVMNLGNKNRSVGATNMNEDSSRSHAIFTITIECSEKGEDG--ENHIRVGKLNL 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 234 VDLAGSERAAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDGQvGGFINYRDSKLTRILQNSLGGNAKTRIICTITPVS- 312
Cdd:cd01371 238 VDLAGSERQSKTGATGERLKEATKINLSLSALGNVISALVDGK-STHIPYRDSKLTRLLQDSLGGNSKTVMCANIGPADy 316
|
330
....*....|....*.
gi 767930917 313 -FDETLTALQFASTAK 327
Cdd:cd01371 317 nYDETLSTLRYANRAK 332
|
|
| KISc_KIF1A_KIF1B |
cd01365 |
Kinesin motor domain, KIF1_like proteins; Kinesin motor domain, KIF1_like proteins. KIF1A ... |
7-336 |
1.52e-97 |
|
Kinesin motor domain, KIF1_like proteins; Kinesin motor domain, KIF1_like proteins. KIF1A (Unc104) transports synaptic vesicles to the nerve terminal, KIF1B has been implicated in transport of mitochondria. Both proteins are expressed in neurons. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. In contrast to the majority of dimeric kinesins, most KIF1A/Unc104 kinesins are monomeric motors. A lysine-rich loop in KIF1A binds to the negatively charged C-terminus of tubulin and compensates for the lack of a second motor domain, allowing KIF1A to move processively.
Pssm-ID: 276816 [Multi-domain] Cd Length: 361 Bit Score: 319.68 E-value: 1.52e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 7 VAVCVRVRPLNSREESLGE-----------TAQVYWKTDNNVIYQVDGSKSFNFDRVF--HGNE-----TTKNVYEEIAA 68
Cdd:cd01365 3 VKVAVRVRPFNSREKERNSkcivqmsgketTLKNPKQADKNNKATREVPKSFSFDYSYwsHDSEdpnyaSQEQVYEDLGE 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 69 PIIDSAIQGYNGTIFAYGQTASGKTYTMMGSEDHLGVIPRAIHDIFQKIKKFPDRE--FLLRVSYMEIYNETITDLLCGT 146
Cdd:cd01365 83 ELLQHAFEGYNVCLFAYGQTGSGKSYTMMGTQEQPGIIPRLCEDLFSRIADTTNQNmsYSVEVSYMEIYNEKVRDLLNPK 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 147 QKMKP--LIIREDVNRNVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFrMILESREKGEPSNCEG 224
Cdd:cd01365 163 PKKNKgnLKVREHPVLGPYVEDLSKLAVTSYEDIQDLMDEGNKSRTVAATNMNDTSSRSHAVF-TIVLTQKRHDAETNLT 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 225 SVKVSHLNLVDLAGSERAAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDGQVGG------FINYRDSKLTRILQNSLGG 298
Cdd:cd01365 242 TEKVSKISLVDLAGSERASSTGATGDRLKEGANINKSLTTLGKVISALADMSSGKskkkssFIPYRDSVLTWLLKENLGG 321
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 767930917 299 NAKTRIICTITPVS--FDETLTALQFASTAKYMKNTPYVN 336
Cdd:cd01365 322 NSKTAMIAAISPADinYEETLSTLRYADRAKKIVNRAVVN 361
|
|
| KISc_KHC_KIF5 |
cd01369 |
Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup; Kinesin motor domain, ... |
7-327 |
3.01e-97 |
|
Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup; Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup. Members of this group have been associated with organelle transport. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.
Pssm-ID: 276820 [Multi-domain] Cd Length: 325 Bit Score: 317.35 E-value: 3.01e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 7 VAVCVRVRPLNSREESLGETAQVYWKTDNNV-IYQVDGSKSFNFDRVFHGNETTKNVYEEIAAPIIDSAIQGYNGTIFAY 85
Cdd:cd01369 4 IKVVCRFRPLNELEVLQGSKSIVKFDPEDTVvIATSETGKTFSFDRVFDPNTTQEDVYNFAAKPIVDDVLNGYNGTIFAY 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 86 GQTASGKTYTMMGS---EDHLGVIPRAIHDIFQKIKKFPDR-EFLLRVSYMEIYNETITDLLcGTQKmKPLIIREDVNRN 161
Cdd:cd01369 84 GQTSSGKTYTMEGKlgdPESMGIIPRIVQDIFETIYSMDENlEFHVKVSYFEIYMEKIRDLL-DVSK-TNLSVHEDKNRG 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 162 VYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESRekgepSNCEGSVKVSHLNLVDLAGSER 241
Cdd:cd01369 162 PYVKGATERFVSSPEEVLDVIDEGKSNRHVAVTNMNEESSRSHSIFLINVKQE-----NVETEKKKSGKLYLVDLAGSEK 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 242 AAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDGQvGGFINYRDSKLTRILQNSLGGNAKTRIICTITPVSFD--ETLTA 319
Cdd:cd01369 237 VSKTGAEGAVLDEAKKINKSLSALGNVINALTDGK-KTHIPYRDSKLTRILQDSLGGNSRTTLIICCSPSSYNesETLST 315
|
....*...
gi 767930917 320 LQFASTAK 327
Cdd:cd01369 316 LRFGQRAK 323
|
|
| KISc_C_terminal |
cd01366 |
Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins; Kinesin motor domain, ... |
12-324 |
3.41e-96 |
|
Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins; Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins. Ncd is a spindle motor protein necessary for chromosome segregation in meiosis. KIFC2/KIFC3-like kinesins have been implicated in motility of the Golgi apparatus as well as dentritic and axonal transport in neurons. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In this subgroup the motor domain is found at the C-terminus (C-type). C-type kinesins are (-) end-directed motors, i.e. they transport cargo towards the (-) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.
Pssm-ID: 276817 [Multi-domain] Cd Length: 329 Bit Score: 314.53 E-value: 3.41e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 12 RVRPLNSREESLGETAQVYWKTDNNVI---YQVDGSKSFNFDRVFHGNETTKNVYEEIAaPIIDSAIQGYNGTIFAYGQT 88
Cdd:cd01366 9 RVRPLLPSEENEDTSHITFPDEDGQTIeltSIGAKQKEFSFDKVFDPEASQEDVFEEVS-PLVQSALDGYNVCIFAYGQT 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 89 ASGKTYTMMGSEDHLGVIPRAIHDIFQKIKKFPDR--EFLLRVSYMEIYNETITDLLC-GTQKMKPLIIRED-VNRNVYV 164
Cdd:cd01366 88 GSGKTYTMEGPPESPGIIPRALQELFNTIKELKEKgwSYTIKASMLEIYNETIRDLLApGNAPQKKLEIRHDsEKGDTTV 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 165 ADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGEPSNCEGSvkvshLNLVDLAGSERAAQ 244
Cdd:cd01366 168 TNLTEVKVSSPEEVRQLLKKASKNRSTASTAMNEHSSRSHSVFILHISGRNLQTGEISVGK-----LNLVDLAGSERLNK 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 245 TGAAGVRLKEGCNINRSLFILGQVIKKLSDGQvgGFINYRDSKLTRILQNSLGGNAKTRIICTITPV--SFDETLTALQF 322
Cdd:cd01366 243 SGATGDRLKETQAINKSLSALGDVISALRQKQ--SHIPYRNSKLTYLLQDSLGGNSKTLMFVNISPAesNLNETLNSLRF 320
|
..
gi 767930917 323 AS 324
Cdd:cd01366 321 AS 322
|
|
| KISc_KIP3_like |
cd01370 |
Kinesin motor domain, KIP3-like subgroup; Kinesin motor domain, KIP3-like subgroup. The yeast ... |
9-327 |
1.20e-92 |
|
Kinesin motor domain, KIP3-like subgroup; Kinesin motor domain, KIP3-like subgroup. The yeast kinesin KIP3 plays a role in positioning the mitotic spindle. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.
Pssm-ID: 276821 [Multi-domain] Cd Length: 345 Bit Score: 305.04 E-value: 1.20e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 9 VCVRVRPLNSREESLG---------------------ETAQVYWKTDNNVIYQVDGSKSFNFDRVFHGNETTKNVYEEIA 67
Cdd:cd01370 4 VAVRVRPFSEKEKNEGfrrivkvmdnhmlvfdpkdeeDGFFHGGSNNRDRRKRRNKELKYVFDRVFDETSTQEEVYEETT 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 68 APIIDSAIQGYNGTIFAYGQTASGKTYTMMGSEDHLGVIPRAIHDIFQKIKKFPD-REFLLRVSYMEIYNETITDLLcgT 146
Cdd:cd01370 84 KPLVDGVLNGYNATVFAYGATGAGKTHTMLGTPQEPGLMVLTMKELFKRIESLKDeKEFEVSMSYLEIYNETIRDLL--N 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 147 QKMKPLIIREDVNRNVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGEPSNCEgsV 226
Cdd:cd01370 162 PSSGPLELREDAQNGIVVAGLTEHSPKSAEEILELLMKGNRNRTQEPTDANATSSRSHAVLQITVRQQDKTASINQQ--V 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 227 KVSHLNLVDLAGSERAAQTGAAGVRLKEGCNINRSLFILGQVIKKLSD-GQVGGFINYRDSKLTRILQNSLGGNAKTRII 305
Cdd:cd01370 240 RQGKLSLIDLAGSERASATNNRGQRLKEGANINRSLLALGNCINALADpGKKNKHIPYRDSKLTRLLKDSLGGNCRTVMI 319
|
330 340
....*....|....*....|....
gi 767930917 306 CTITP--VSFDETLTALQFASTAK 327
Cdd:cd01370 320 ANISPssSSYEETHNTLKYANRAK 343
|
|
| KISc_KLP2_like |
cd01373 |
Kinesin motor domain, KIF15-like subgroup; Kinesin motor domain, KIF15-like subgroup. Members ... |
6-339 |
2.62e-92 |
|
Kinesin motor domain, KIF15-like subgroup; Kinesin motor domain, KIF15-like subgroup. Members of this subgroup seem to play a role in mitosis and meiosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.
Pssm-ID: 276824 [Multi-domain] Cd Length: 347 Bit Score: 304.05 E-value: 2.62e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 6 AVAVCVRVRPLNSREESLGETAQVYWKTDNNVIYQVDGSKSFNFDRVFHGNETTKNVYEEIAAPIIDSAIQGYNGTIFAY 85
Cdd:cd01373 2 AVKVFVRIRPPAEREGDGEYGQCLKKLSSDTLVLHSKPPKTFTFDHVADSNTNQESVFQSVGKPIVESCLSGYNGTIFAY 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 86 GQTASGKTYTMMG-SEDHL-------GVIPRAIHDIFQKIKKFPDR-----EFLLRVSYMEIYNETITDLLCGTQkmKPL 152
Cdd:cd01373 82 GQTGSGKTYTMWGpSESDNesphglrGVIPRIFEYLFSLIQREKEKagegkSFLCKCSFLEIYNEQIYDLLDPAS--RNL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 153 IIREDVNRNVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGepsNCEGSVKVSHLN 232
Cdd:cd01373 160 KLREDIKKGVYVENLVEEYVTSAEDVYQVLSKGWSNRKVAATSMNRESSRSHAVFTCTIESWEKK---ACFVNIRTSRLN 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 233 LVDLAGSERAAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDGQVGGF--INYRDSKLTRILQNSLGGNAKTRIICTITP 310
Cdd:cd01373 237 LVDLAGSERQKDTHAEGVRLKEAGNINKSLSCLGHVINALVDVAHGKQrhVCYRDSKLTFLLRDSLGGNAKTAIIANVHP 316
|
330 340 350
....*....|....*....|....*....|.
gi 767930917 311 VS--FDETLTALQFASTAKYMKNTPYVNEVS 339
Cdd:cd01373 317 SSkcFGETLSTLRFAQRAKLIKNKAVVNEDT 347
|
|
| KISc_BimC_Eg5 |
cd01364 |
Kinesin motor domain, BimC/Eg5 spindle pole proteins; Kinesin motor domain, BimC/Eg5 spindle ... |
7-337 |
5.31e-85 |
|
Kinesin motor domain, BimC/Eg5 spindle pole proteins; Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type), N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.
Pssm-ID: 276815 [Multi-domain] Cd Length: 353 Bit Score: 283.45 E-value: 5.31e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 7 VAVCVRVRPLNSREESLGETAQVYWKTDNNVI---YQVDGS----KSFNFDRVFHGNETTKNVYEEIAAPIIDSAIQGYN 79
Cdd:cd01364 4 IQVVVRCRPFNLRERKASSHSVVEVDPVRKEVsvrTGGLADksstKTYTFDMVFGPEAKQIDVYRSVVCPILDEVLMGYN 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 80 GTIFAYGQTASGKTYTMMGSE-----------DHLGVIPRAIHDIFQKIKKfPDREFLLRVSYMEIYNETITDLL-CGTQ 147
Cdd:cd01364 84 CTIFAYGQTGTGKTYTMEGDRspneeytweldPLAGIIPRTLHQLFEKLED-NGTEYSVKVSYLEIYNEELFDLLsPSSD 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 148 KMKPLIIREDVNR--NVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGepSNCEGS 225
Cdd:cd01364 163 VSERLRMFDDPRNkrGVIIKGLEEITVHNKDEVYQILEKGAAKRKTAATLMNAQSSRSHSVFSITIHIKETT--IDGEEL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 226 VKVSHLNLVDLAGSERAAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDGqvGGFINYRDSKLTRILQNSLGGNAKTRII 305
Cdd:cd01364 241 VKIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVER--APHVPYRESKLTRLLQDSLGGRTKTSII 318
|
330 340 350
....*....|....*....|....*....|....
gi 767930917 306 CTITP--VSFDETLTALQFASTAKYMKNTPYVNE 337
Cdd:cd01364 319 ATISPasVNLEETLSTLEYAHRAKNIKNKPEVNQ 352
|
|
| KISc_KIF23_like |
cd01368 |
Kinesin motor domain, KIF23-like subgroup; Kinesin motor domain, KIF23-like subgroup. Members ... |
7-327 |
2.89e-76 |
|
Kinesin motor domain, KIF23-like subgroup; Kinesin motor domain, KIF23-like subgroup. Members of this group may play a role in mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.
Pssm-ID: 276819 [Multi-domain] Cd Length: 345 Bit Score: 258.09 E-value: 2.89e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 7 VAVCVRVRPLNSREESLGETAQVYWKTDNNVIYQV-DGSKS-------------FNFDRVFHGNETTKNVYEEIAAPIID 72
Cdd:cd01368 3 VKVYLRVRPLSKDELESEDEGCIEVINSTTVVLHPpKGSAAnksernggqketkFSFSKVFGPNTTQKEFFQGTALPLVQ 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 73 SAIQGYNGTIFAYGQTASGKTYTMMGSEDHLGVIPRAIHDIFQKIKkfpdrEFLLRVSYMEIYNETITDLL-----CGTQ 147
Cdd:cd01368 83 DLLHGKNGLLFTYGVTNSGKTYTMQGSPGDGGILPRSLDVIFNSIG-----GYSVFVSYIEIYNEYIYDLLepspsSPTK 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 148 KMKPLIIREDVNRNVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMIL---ESREKGEPSNCEG 224
Cdd:cd01368 158 KRQSLRLREDHNGNMYVAGLTEIEVKSTEEARKVLKRGQKNRSVAGTKLNRESSRSHSVFTIKLvqaPGDSDGDVDQDKD 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 225 SVKVSHLNLVDLAGSERAAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDGQVGGFIN---YRDSKLTRILQNSLGGNAK 301
Cdd:cd01368 238 QITVSQLSLVDLAGSERTSRTQNTGERLKEAGNINTSLMTLGTCIEVLRENQLQGTNKmvpFRDSKLTHLFQNYFDGEGK 317
|
330 340
....*....|....*....|....*...
gi 767930917 302 TRIICTITPVS--FDETLTALQFASTAK 327
Cdd:cd01368 318 ASMIVNVNPCAsdYDETLHVMKFSAIAQ 345
|
|
| KISc_KIF9_like |
cd01375 |
Kinesin motor domain, KIF9-like subgroup; Kinesin motor domain, KIF9-like subgroup; might play ... |
6-327 |
2.27e-75 |
|
Kinesin motor domain, KIF9-like subgroup; Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.
Pssm-ID: 276826 [Multi-domain] Cd Length: 334 Bit Score: 254.81 E-value: 2.27e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 6 AVAVCVRVRPLNSREESL------GETAQVYWKTD--NNVIYQVDGSKSFNFDRVFHgNETTKNVYEEIAAPIIDSAIQG 77
Cdd:cd01375 1 KVQAFVRVRPTDDFAHEMikygedGKSISIHLKKDlrRGVVNNQQEDWSFKFDGVLH-NASQELVYETVAKDVVSSALAG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 78 YNGTIFAYGQTASGKTYTMMGSED---HLGVIPRAIHDIFQKIKKFPDREFLLRVSYMEIYNETITDLLCGT----QKMK 150
Cdd:cd01375 80 YNGTIFAYGQTGAGKTFTMTGGTEnykHRGIIPRALQQVFRMIEERPTKAYTVHVSYLEIYNEQLYDLLSTLpyvgPSVT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 151 PLIIREDVNRNVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKgEPSncEGSVKVSH 230
Cdd:cd01375 160 PMTILEDSPQNIFIKGLSLHLTSQEEEALSLLFLGETNRIIASHTMNKNSSRSHCIFTIHLEAHSR-TLS--SEKYITSK 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 231 LNLVDLAGSERAAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDgQVGGFINYRDSKLTRILQNSLGGNAKTRIICTIT- 309
Cdd:cd01375 237 LNLVDLAGSERLSKTGVEGQVLKEATYINKSLSFLEQAIIALSD-KDRTHVPFRQSKLTHVLRDSLGGNCNTVMVANIYg 315
|
330
....*....|....*....
gi 767930917 310 -PVSFDETLTALQFASTAK 327
Cdd:cd01375 316 eAAQLEETLSTLRFASRVK 334
|
|
| KIP1 |
COG5059 |
Kinesin-like protein [Cytoskeleton]; |
34-339 |
1.03e-66 |
|
Kinesin-like protein [Cytoskeleton];
Pssm-ID: 227392 [Multi-domain] Cd Length: 568 Bit Score: 237.71 E-value: 1.03e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 34 DNNVIYQVDGSKSFNFDRVFHGNETTKNVYEEIAAPIIDSAIQGYNGTIFAYGQTASGKTYTMMGSEDHLGVIPRAIHDI 113
Cdd:COG5059 45 KSHVSLEKSKEGTYAFDKVFGPSATQEDVYEETIKPLIDSLLLGYNCTVFAYGQTGSGKTYTMSGTEEEPGIIPLSLKEL 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 114 FQKIKKFPDR-EFLLRVSYMEIYNETITDLLcgTQKMKPLIIREDVNRNVYVADLTEEVVYTSEMALKWITKGEKSRHYG 192
Cdd:COG5059 125 FSKLEDLSMTkDFAVSISYLEIYNEKIYDLL--SPNEESLNIREDSLLGVKVAGLTEKHVSSKEEILDLLRKGEKNRTTA 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 193 ETKMNQRSSRSHTIFRMILESREKGEPSNCEGSvkvshLNLVDLAGSERAAQTGAAGVRLKEGCNINRSLFILGQVIKKL 272
Cdd:COG5059 203 STEINDESSRSHSIFQIELASKNKVSGTSETSK-----LSLVDLAGSERAARTGNRGTRLKEGASINKSLLTLGNVINAL 277
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 767930917 273 SDGQVGGFINYRDSKLTRILQNSLGGNAKTRIICTITP--VSFDETLTALQFASTAKYMKNTPYVNEVS 339
Cdd:COG5059 278 GDKKKSGHIPYRESKLTRLLQDSLGGNCNTRVICTISPssNSFEETINTLKFASRAKSIKNKIQVNSSS 346
|
|
| KISc_KIF2_like |
cd01367 |
Kinesin motor domain, KIF2-like group; Kinesin motor domain, KIF2-like group. KIF2 is a ... |
9-327 |
2.03e-66 |
|
Kinesin motor domain, KIF2-like group; Kinesin motor domain, KIF2-like group. KIF2 is a protein expressed in neurons, which has been associated with axonal transport and neuron development; alternative splice forms have been implicated in lysosomal translocation. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In this subgroup the motor domain is found in the middle (M-type) of the protein chain. M-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second (KIF2 may be slower). To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.
Pssm-ID: 276818 [Multi-domain] Cd Length: 328 Bit Score: 228.72 E-value: 2.03e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 9 VCVRVRPLNSREESLGETAQVYWKTDNNVI-----YQVDGSK-----SFNFDRVFHGNETTKNVYEEIAAPIIDSAIQGY 78
Cdd:cd01367 4 VCVRKRPLNKKEVAKKEIDVVSVPSKLTLIvhepkLKVDLTKyienhTFRFDYVFDESSSNETVYRSTVKPLVPHIFEGG 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 79 NGTIFAYGQTASGKTYTMMGS----EDHLGVIPRAIHDIFQKIKKFPDREFL-LRVSYMEIYNETITDLLcgtQKMKPLI 153
Cdd:cd01367 84 KATCFAYGQTGSGKTYTMGGDfsgqEESKGIYALAARDVFRLLNKLPYKDNLgVTVSFFEIYGGKVFDLL---NRKKRVR 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 154 IREDVNRNVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKgepsNCEGSVkvshLNL 233
Cdd:cd01367 161 LREDGKGEVQVVGLTEKPVTSAEELLELIESGSSLRTTGQTSANSQSSRSHAILQIILRDRGT----NKLHGK----LSF 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 234 VDLAGSERAAQTGAAGV-RLKEGCNINRSLFILGQVIKKLSDGQVggFINYRDSKLTRILQNSL-GGNAKTRIICTITP- 310
Cdd:cd01367 233 VDLAGSERGADTSSADRqTRMEGAEINKSLLALKECIRALGQNKA--HIPFRGSKLTQVLKDSFiGENSKTCMIATISPg 310
|
330
....*....|....*...
gi 767930917 311 -VSFDETLTALQFASTAK 327
Cdd:cd01367 311 aSSCEHTLNTLRYADRVK 328
|
|
| KISc_KID_like |
cd01376 |
Kinesin motor domain, KIF22/Kid-like subgroup; Kinesin motor domain, KIF22/Kid-like subgroup. ... |
7-327 |
4.78e-65 |
|
Kinesin motor domain, KIF22/Kid-like subgroup; Kinesin motor domain, KIF22/Kid-like subgroup. Members of this group might play a role in regulating chromosomal movement along microtubules in mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.
Pssm-ID: 276827 [Multi-domain] Cd Length: 319 Bit Score: 224.69 E-value: 4.78e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 7 VAVCVRVRPLNSREESLGETAQVYWkTDNNVIYQVDG-----SKSFNFDRVFHGNETTKNVYEEIAAPIIDSAIQGYNGT 81
Cdd:cd01376 2 VRVAVRVRPFVDGTAGASDPSCVSG-IDSCSVELADPrnhgeTLKYQFDAFYGEESTQEDIYAREVQPIVPHLLEGQNAT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 82 IFAYGQTASGKTYTMMGSEDHLGVIPRAIHDIFQKIKKFPDREFLLrVSYMEIYNETITDLLcgTQKMKPLIIREDVNRN 161
Cdd:cd01376 81 VFAYGSTGAGKTFTMLGSPEQPGLMPLTVMDLLQMTRKEAWALSFT-MSYLEIYQEKILDLL--EPASKELVIREDKDGN 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 162 VYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREkgepSNCEGSVKVSHLNLVDLAGSER 241
Cdd:cd01376 158 ILIPGLSSKPIKSMAEFEEAFLPASKNRTVAATRLNDNSSRSHAVLLIKVDQRE----RLAPFRQRTGKLNLIDLAGSED 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 242 AAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDGQvgGFINYRDSKLTRILQNSLGGNAKTRIICTITP--VSFDETLTA 319
Cdd:cd01376 234 NRRTGNEGIRLKESGAINSSLFVLSKVVNALNKNL--PRIPYRDSKLTRLLQDSLGGGSRCIMVANIAPerTFYQDTLST 311
|
....*...
gi 767930917 320 LQFASTAK 327
Cdd:cd01376 312 LNFAARSR 319
|
|
| PLN03188 |
PLN03188 |
kinesin-12 family protein; Provisional |
7-362 |
3.15e-63 |
|
kinesin-12 family protein; Provisional
Pssm-ID: 215621 [Multi-domain] Cd Length: 1320 Bit Score: 239.45 E-value: 3.15e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 7 VAVCVRVRPLNSREEslGETAQVYWKTDNNVIyqvdGSKSFNFDRVFHGNETTKNVYEEIAAPIIDSAIQGYNGTIFAYG 86
Cdd:PLN03188 100 VKVIVRMKPLNKGEE--GEMIVQKMSNDSLTI----NGQTFTFDSIADPESTQEDIFQLVGAPLVENCLAGFNSSVFAYG 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 87 QTASGKTYTMMG-----SEDHL-----GVIPRAIHDIFQKIK----KFPDRE--FLLRVSYMEIYNETITDLLCGTQKmk 150
Cdd:PLN03188 174 QTGSGKTYTMWGpanglLEEHLsgdqqGLTPRVFERLFARINeeqiKHADRQlkYQCRCSFLEIYNEQITDLLDPSQK-- 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 151 PLIIREDVNRNVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGEpSNCEGSVKVSH 230
Cdd:PLN03188 252 NLQIREDVKSGVYVENLTEEYVKTMKDVTQLLIKGLSNRRTGATSINAESSRSHSVFTCVVESRCKSV-ADGLSSFKTSR 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 231 LNLVDLAGSERAAQTGAAGVRLKEGCNINRSLFILGQVIKKLSD-GQVGG--FINYRDSKLTRILQNSLGGNAKTRIICT 307
Cdd:PLN03188 331 INLVDLAGSERQKLTGAAGDRLKEAGNINRSLSQLGNLINILAEiSQTGKqrHIPYRDSRLTFLLQESLGGNAKLAMVCA 410
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 767930917 308 ITPVSF--DETLTALQFASTAKYMKNTPYVNEVSTDEalLKRYRKEIMDLKKQLEEV 362
Cdd:PLN03188 411 ISPSQSckSETFSTLRFAQRAKAIKNKAVVNEVMQDD--VNFLREVIRQLRDELQRV 465
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1332-2076 |
9.47e-25 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 113.61 E-value: 9.47e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1332 RLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQeqslnmkekdNETTKIVSEMEQFKp 1411
Cdd:TIGR02168 236 ELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKEL----------YALANEISRLEQQK- 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1412 kdsalLRIEIEMLGLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEE 1491
Cdd:TIGR02168 305 -----QILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEE 379
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1492 TINELRVNLSEKETEISTIQKQ-------LEAINDKLQNKIQEIYEKEEQFNIKQISEVQEKVNELKQFKEHRKAKDSAL 1564
Cdd:TIGR02168 380 QLETLRSKVAQLELQIASLNNEierlearLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERL 459
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1565 QSIESkmlELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKMKESQ---------------EKEYQ 1629
Cdd:TIGR02168 460 EEALE---ELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSglsgilgvlselisvDEGYE 536
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1630 ---------FLKMTAVNETQEKMCEIEHLKEQfETQKLNLENIETENIRLTQILH-ENLEEMRSVTKERDDLRSVEETLK 1699
Cdd:TIGR02168 537 aaieaalggRLQAVVVENLNAAKKAIAFLKQN-ELGRVTFLPLDSIKGTEIQGNDrEILKNIEGFLGVAKDLVKFDPKLR 615
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1700 VERDQLKENLR--ETITRDLKIQEELRIAHMHLKEQQETIDKlRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEH 1777
Cdd:TIGR02168 616 KALSYLLGGVLvvDDLDNALELAKKLRPGYRIVTLDGDLVRP-GGVITGGSAKTNSSILERRREIEELEEKIEELEEKIA 694
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1778 ----QLITLKKDV----NETQKKVSEMEQLKKQIKDQSLTLSKLEIENLNLAQKLHENLEEMKSVMKERDNLRRVEETLK 1849
Cdd:TIGR02168 695 elekALAELRKELeeleEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAE 774
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1850 LERDQLKESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKDLDKSKDELQKKIQELQKKELQL 1929
Cdd:TIGR02168 775 EELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDI 854
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1930 LRVKEDVNMSHKKINEME----QLKKQFEAQNLSMQSVRMDNFQLTKKLHESLEEIRIVAKERDELRRI-------KESL 1998
Cdd:TIGR02168 855 ESLAAEIEELEELIEELEseleALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKlaqlelrLEGL 934
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1999 KMERDQFIATLREMIARDRQNHQVKPEKRLLS-DGQQHLTESLREKCSRI-----------KELLKRYSEMDDHYECLNR 2066
Cdd:TIGR02168 935 EVRIDNLQERLSEEYSLTLEEAEALENKIEDDeEEARRRLKRLENKIKELgpvnlaaieeyEELKERYDFLTAQKEDLTE 1014
|
810
....*....|
gi 767930917 2067 LSLDLEKEIE 2076
Cdd:TIGR02168 1015 AKETLEEAIE 1024
|
|
| Motor_domain |
cd01363 |
Myosin and Kinesin motor domain; Myosin and Kinesin motor domain. These ATPases belong to the ... |
9-269 |
4.62e-24 |
|
Myosin and Kinesin motor domain; Myosin and Kinesin motor domain. These ATPases belong to the P-loop NTPase family and provide the driving force in myosin and kinesin mediated processes. Some of the names do not match with what is given in the sequence list. This is because they are based on the current nomenclature by Kollmar/Sebe-Pedros.
Pssm-ID: 276814 [Multi-domain] Cd Length: 170 Bit Score: 101.27 E-value: 4.62e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 9 VCVRVRPLNSREESlgetaqvywktdnnviyqvDGSKSFNFDRVFHGNETTKNVYEeIAAPIIDSAIQGYNG-TIFAYGQ 87
Cdd:cd01363 1 VLVRVNPFKELPIY-------------------RDSKIIVFYRGFRRSESQPHVFA-IADPAYQSMLDGYNNqSIFAYGE 60
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 88 TASGKTYTMMgsedhlGVIPRAIHDIFQKIKKfpdrefllrvsymeiynetitdllcgtqkmkpliiredvNRNVYVADL 167
Cdd:cd01363 61 SGAGKTETMK------GVIPYLASVAFNGINK---------------------------------------GETEGWVYL 95
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 168 TEEVVYTSEMALKWITKGEKSRHyGETKMNQRSSRSHTIFRMilesrekgepsncegsvkvshlnLVDLAGSERaaqtga 247
Cdd:cd01363 96 TEITVTLEDQILQANPILEAFGN-AKTTRNENSSRFGKFIEI-----------------------LLDIAGFEI------ 145
|
250 260
....*....|....*....|..
gi 767930917 248 agvrlkegcnINRSLFILGQVI 269
Cdd:cd01363 146 ----------INESLNTLMNVL 157
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
828-1715 |
5.10e-24 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 111.30 E-value: 5.10e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 828 DFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQE---RLNEMEQ----LKEQLENRD 900
Cdd:TIGR02168 236 ELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYAlanEISRLEQqkqiLRERLANLE 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 901 STLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIHDTVNMNIDTQEQLRNALESLKQHQETI 980
Cdd:TIGR02168 316 RQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQI 395
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 981 NTLKSKISEEVSRNLHMEENtgetKDEFQQKMVGIDKKQDLEAKNTQTLTADVKDNEIIEQQRKIFSLIQEKNELQQMLE 1060
Cdd:TIGR02168 396 ASLNNEIERLEARLERLEDR----RERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELE 471
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1061 sviaEKEQLKTDLKENIEMTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLaEVEEKLKeksqqlqekq 1140
Cdd:TIGR02168 472 ----EAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSGILGVLSELI-SVDEGYE---------- 536
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1141 qqllnvqeemsemqkkiNEIENLKNElknkelTLEHMETERLELAQKLNENYEEvksitkerkvlKELQKSFETERDHLR 1220
Cdd:TIGR02168 537 -----------------AAIEAALGG------RLQAVVVENLNAAKKAIAFLKQ-----------NELGRVTFLPLDSIK 582
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1221 GyiREIEATGLQTKEELKIAHIHLKEHQETIDELRRSVSEKTAQIINTQDLEKShtklqeeipvLHEEQELLPNVKEVSE 1300
Cdd:TIGR02168 583 G--TEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLVVDDLDNA----------LELAKKLRPGYRIVTL 650
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1301 TQETMNELELLTEQSTTKDSTTLARiEMERLRLNEKFQESQEEIKSLTKERdnlktikEALEVKHDQLKEHIRETLAKIQ 1380
Cdd:TIGR02168 651 DGDLVRPGGVITGGSAKTNSSILER-RREIEELEEKIEELEEKIAELEKAL-------AELRKELEELEEELEQLRKELE 722
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1381 ESQskQEQSLNMKEKDNETTKIVSEMEQFKPKDSALLRIEIEMLGLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQ 1460
Cdd:TIGR02168 723 ELS--RQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKA 800
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1461 LKENIKEIVAKHLETEEElkvahccLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQFNiKQI 1540
Cdd:TIGR02168 801 LREALDELRAELTLLNEE-------AANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIE-ELE 872
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1541 SEVQEKVNELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEivakm 1620
Cdd:TIGR02168 873 SELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSE----- 947
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1621 kesqekEYQFLKMTAVNETQEKMCEIEHLKEQfetqklnLENIETENIRLTQILHENLEEMRSVTKERDDLRSVEETLkv 1700
Cdd:TIGR02168 948 ------EYSLTLEEAEALENKIEDDEEEARRR-------LKRLENKIKELGPVNLAAIEEYEELKERYDFLTAQKEDL-- 1012
|
890
....*....|....*
gi 767930917 1701 erDQLKENLRETITR 1715
Cdd:TIGR02168 1013 --TEAKETLEEAIEE 1025
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1082-1876 |
7.74e-22 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 104.37 E-value: 7.74e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1082 ENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIE 1161
Cdd:TIGR02168 222 LRELELALLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLE 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1162 N----LKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKERKVLKELQKSFETERDHLRGYIREIEATGLQTKEEL 1237
Cdd:TIGR02168 302 QqkqiLRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQL 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1238 KIAHIHLKEHQETIDELRRSVSEKTAQIintQDLEKSHTKLQEEIPVLHEEQELlPNVKEVSETQETMNELELLTEQSTT 1317
Cdd:TIGR02168 382 ETLRSKVAQLELQIASLNNEIERLEARL---ERLEDRRERLQQEIEELLKKLEE-AELKELQAELEELEEELEELQEELE 457
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1318 KDSTTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKE---------HIRETLAKIQESQSKQEQ 1388
Cdd:TIGR02168 458 RLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKAllknqsglsGILGVLSELISVDEGYEA 537
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1389 SLN----------MKEKDNETTKIVSEMEQ------------------FKPKDSALLRIEIEMLGLSKRLQESHDEMKSV 1440
Cdd:TIGR02168 538 AIEaalggrlqavVVENLNAAKKAIAFLKQnelgrvtflpldsikgteIQGNDREILKNIEGFLGVAKDLVKFDPKLRKA 617
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1441 AKEKDDLQRLQEVLQSESDQLKENIK---------EIVAKH--------------LETEEELKVAHCCLKEQEETINELR 1497
Cdd:TIGR02168 618 LSYLLGGVLVVDDLDNALELAKKLRPgyrivtldgDLVRPGgvitggsaktnssiLERRREIEELEEKIEELEEKIAELE 697
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1498 VNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEeqfniKQISEVQEKVNELKQFKEHRkakDSALQSIESKMLELTNR 1577
Cdd:TIGR02168 698 KALAELRKELEELEEELEQLRKELEELSRQISALR-----KDLARLEAEVEQLEERIAQL---SKELTELEAEIEELEER 769
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1578 LQESQEEIQIMIKEKEEMKRVQEALQIERDQLKEntkeivakMKESQEKEYQFLKmTAVNETQEKMCEIEHlkeqfetqk 1657
Cdd:TIGR02168 770 LEEAEEELAEAEAEIEELEAQIEQLKEELKALRE--------ALDELRAELTLLN-EEAANLRERLESLER--------- 831
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1658 lNLENIETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETITRDLKIQEELRIAHMHLKEQQETI 1737
Cdd:TIGR02168 832 -RIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKR 910
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1738 DKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELkaNEHQLITLKKDVNETQKKVSEMEQLKKQIKdqSLTLSKLEIEN 1817
Cdd:TIGR02168 911 SELRRELEELREKLAQLELRLEGLEVRIDNLQERL--SEEYSLTLEEAEALENKIEDDEEEARRRLK--RLENKIKELGP 986
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*....
gi 767930917 1818 LNLAQklhenLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETkarDLEIQQELKTA 1876
Cdd:TIGR02168 987 VNLAA-----IEEYEELKERYDFLTAQKEDLTEAKETLEEAIEEI---DREARERFKDT 1037
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1163-2012 |
1.40e-21 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 103.60 E-value: 1.40e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1163 LKNELKNKELTL-----EHMETERLELAQKLNENYEEVKSITKERKVLKELQKSFETERDHLRGYIREIEATGLQTKEEL 1237
Cdd:TIGR02168 218 LKAELRELELALlvlrlEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEI 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1238 KIAHIHLKEHQETIDELRRSVSEKTAQIINTQ----DLEKSHTKLQEEIPVLHEEQELLPNvkEVSETQETMNELEllte 1313
Cdd:TIGR02168 298 SRLEQQKQILRERLANLERQLEELEAQLEELEskldELAEELAELEEKLEELKEELESLEA--ELEELEAELEELE---- 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1314 qsttkdsTTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQsKQEQSLNMK 1393
Cdd:TIGR02168 372 -------SRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAE-LKELQAELE 443
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1394 EKDNETTKIVSEMEQFKpkdSALLRIEIEMLGLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEivakhl 1473
Cdd:TIGR02168 444 ELEEELEELQEELERLE---EALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKN------ 514
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1474 etEEELKVAHCCLKEQEETINELRVNLsekETEISTIQKQLEAINDKLQNKIQEIYEKEEQFNIKQISEVQEKVNELkqf 1553
Cdd:TIGR02168 515 --QSGLSGILGVLSELISVDEGYEAAI---EAALGGRLQAVVVENLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEI--- 586
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1554 kehRKAKDSALQSIESkMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKE--IVAKMKESQEKEYQFL 1631
Cdd:TIGR02168 587 ---QGNDREILKNIEG-FLGVAKDLVKFDPKLRKALSYLLGGVLVVDDLDNALELAKKLRPGyrIVTLDGDLVRPGGVIT 662
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1632 KMTA--VNETQEKMCEIEHLKEQFETQKLNLENIETENIRLtqilhenLEEMRSVTKERDDLRSVEETLKVERDQLKENL 1709
Cdd:TIGR02168 663 GGSAktNSSILERRREIEELEEKIEELEEKIAELEKALAEL-------RKELEELEEELEQLRKELEELSRQISALRKDL 735
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1710 RETITRDLKIQEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDVNET 1789
Cdd:TIGR02168 736 ARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLL 815
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1790 QKKVSEMEQLKKQIKDQsltLSKLEIENLNLAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEI 1869
Cdd:TIGR02168 816 NEEAANLRERLESLERR---IAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALL 892
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1870 QQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKDLDKskdeLQKKIQELQKKELQLLRVKEDVNMSHKKINEMEQL 1949
Cdd:TIGR02168 893 RSELEELSEELRELESKRSELRRELEELREKLAQLELRLEG----LEVRIDNLQERLSEEYSLTLEEAEALENKIEDDEE 968
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 767930917 1950 KKQFEAQNLSMQSVRMDNFQLTkklheSLEEIRIVAKERDELRRIKESLKMERDQFIATLREM 2012
Cdd:TIGR02168 969 EARRRLKRLENKIKELGPVNLA-----AIEEYEELKERYDFLTAQKEDLTEAKETLEEAIEEI 1026
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1063-1963 |
7.69e-20 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 97.83 E-value: 7.69e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1063 IAEKEQLKTDLKENIEMTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRlaEVEEKLKEKsqqlQEKQQQ 1142
Cdd:TIGR02169 165 VAEFDRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRREREKAERYQALLKEKREY--EGYELLKEK----EALERQ 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1143 LLNVQEEMSEMQKkinEIENLKNELKNKELTLEHMETERLELAQKLNENYEEvksitkERKVLKELQKSFETERDHLRGY 1222
Cdd:TIGR02169 239 KEAIERQLASLEE---ELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEE------EQLRVKEKIGELEAEIASLERS 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1223 IREIEATGLQTKEELKIAHIHLKEHQETIDELRRSVSEKTAQIintqdlekshTKLQEEIPVLHEEQELLpnvkeVSETQ 1302
Cdd:TIGR02169 310 IAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRR----------DKLTEEYAELKEELEDL-----RAELE 374
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1303 etmnelELLTEQSTTKDSTTLARIEMERLrlnekfqesQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQES 1382
Cdd:TIGR02169 375 ------EVDKEFAETRDELKDYREKLEKL---------KREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINEL 439
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1383 QSKqeqslnMKEKDNETTKIVSEMEQFKPK----DSALLRIEIEMLGLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSES 1458
Cdd:TIGR02169 440 EEE------KEDKALEIKKQEWKLEQLAADlskyEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVE 513
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1459 DQLKENIKEIV-------------AKHLET-----------EEELKVAHCC--LKEQEET------INELRVNLSEKETe 1506
Cdd:TIGR02169 514 EVLKASIQGVHgtvaqlgsvgeryATAIEVaagnrlnnvvvEDDAVAKEAIelLKRRKAGratflpLNKMRDERRDLSI- 592
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1507 istiqKQLEAINDKLQNKIQeiYEKEEQFNIKQISEVQEKVNELKQFKEHrkAKDSALQSIESKMLE------------- 1573
Cdd:TIGR02169 593 -----LSEDGVIGFAVDLVE--FDPKYEPAFKYVFGDTLVVEDIEAARRL--MGKYRMVTLEGELFEksgamtggsrapr 663
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1574 -LTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKMKESQEKeyqflkmtavneTQEKMCEIEHLKEQ 1652
Cdd:TIGR02169 664 gGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRK------------IGEIEKEIEQLEQE 731
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1653 FETQKLNLENIETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRetitrdlkiQEELRIAHMHLKE 1732
Cdd:TIGR02169 732 EEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLS---------HSRIPEIQAELSK 802
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1733 QQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQLKKQIKDQSLTLSK 1812
Cdd:TIGR02169 803 LEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLES 882
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1813 lEIENLnlaQKLHENLEEMKSVMKERdnlrrvEETLKLERDQLKESLQETKARDLEIQQELKTARMLSKEHKE------- 1885
Cdd:TIGR02169 883 -RLGDL---KKERDELEAQLRELERK------IEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEipeeels 952
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1886 --TVDKLREKISEKTIQISDIQKDLDKSKDELQKKIQELQKKELQLLRVKEDVnmsHKKINEMEQLKKQ-----FEAQNL 1958
Cdd:TIGR02169 953 leDVQAELQRVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAI---LERIEEYEKKKREvfmeaFEAINE 1029
|
....*
gi 767930917 1959 SMQSV 1963
Cdd:TIGR02169 1030 NFNEI 1034
|
|
| Microtub_bd |
pfam16796 |
Microtubule binding; This motor homology domain binds microtubules and lacks an ATP-binding ... |
19-143 |
1.24e-19 |
|
Microtubule binding; This motor homology domain binds microtubules and lacks an ATP-binding site.
Pssm-ID: 465274 [Multi-domain] Cd Length: 144 Bit Score: 87.66 E-value: 1.24e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 19 REESLGETAQVYWKTDNNVIYQVDGSKSFNFDRVFHGNETTKNVYEEIAApIIDSAIQGYNGTIFAYGQTASGKTYTMmg 98
Cdd:pfam16796 29 RPELLSEAQIDYPDETSSDGKIGSKNKSFSFDRVFPPESEQEDVFQEISQ-LVQSCLDGYNVCIFAYGQTGSGSNDGM-- 105
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 767930917 99 sedhlgvIPRAIHDIFQKIKKF-PDREFLLRVSYMEIYNETITDLL 143
Cdd:pfam16796 106 -------IPRAREQIFRFISSLkKGWKYTIELQFVEIYNESSQDLL 144
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1407-2120 |
7.39e-19 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 94.35 E-value: 7.39e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1407 EQFKPKDSALLRIEIEMLGLskRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEElkvahccL 1486
Cdd:TIGR02168 213 ERYKELKAELRELELALLVL--RLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEE-------I 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1487 KEQEETINELRVNLSEKETEISTIQKQLEAINDKLQnKIQEIYEKEEQFNIKQISEVQEKVNELKQFKEHRKAKDSALQS 1566
Cdd:TIGR02168 284 EELQKELYALANEISRLEQQKQILRERLANLERQLE-ELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEE 362
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1567 IESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQL---KENTKEIVAKMKESQEKEYQFLKMTAVNETQEkm 1643
Cdd:TIGR02168 363 LEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLearLERLEDRRERLQQEIEELLKKLEEAELKELQA-- 440
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1644 cEIEHLKEQFETQKLNLENIETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLkenlrETITRDLKIqeel 1723
Cdd:TIGR02168 441 -ELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENL-----EGFSEGVKA---- 510
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1724 riahmhLKEQQETIDKLRGIVSEK------------TDKLSNMQKDLENSNAKLQEKIQELKANEHQLITL--KKDVNET 1789
Cdd:TIGR02168 511 ------LLKNQSGLSGILGVLSELisvdegyeaaieAALGGRLQAVVVENLNAAKKAIAFLKQNELGRVTFlpLDSIKGT 584
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1790 QKKVSEMEQLKKQIKDQSLTLSKLE------------------IENLNLAQKL-HENLEEMKSVMKERDNLRRV------ 1844
Cdd:TIGR02168 585 EIQGNDREILKNIEGFLGVAKDLVKfdpklrkalsyllggvlvVDDLDNALELaKKLRPGYRIVTLDGDLVRPGgvitgg 664
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1845 ---EETLKLERDQ----LKESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKDLDKSKDELQK 1917
Cdd:TIGR02168 665 sakTNSSILERRReieeLEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQ 744
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1918 KIQELQKKELQLLRVKEDVNMSHKKINEMEQLKKQFEAQNLSMQSVRMDNFQLTKKLHESLEEIR-IVAKERDELRRIKE 1996
Cdd:TIGR02168 745 LEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRaELTLLNEEAANLRE 824
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1997 SLKMERDQFIATLREMIARDRQNHQVKPEKRLLSDGQQHLTESLREKCSRIKELLKRYSEMDdhyECLNRLSLDLEKEIE 2076
Cdd:TIGR02168 825 RLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLE---EALALLRSELEELSE 901
|
730 740 750 760
....*....|....*....|....*....|....*....|....
gi 767930917 2077 FQKELSMRVKANLSLPYLQTKHIEKLFTANQRCSMEFHRIMKKL 2120
Cdd:TIGR02168 902 ELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERL 945
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
496-1362 |
1.15e-18 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 93.97 E-value: 1.15e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 496 IESELNSLRADYdnLVLDYEQLRTEKEEMELKLKEKNDldEFEALERKTkkdQEMQLIHEISNLKNLVKHAEVynQDLEN 575
Cdd:TIGR02168 218 LKAELRELELAL--LVLRLEELREELEELQEELKEAEE--ELEELTAEL---QELEEKLEELRLEVSELEEEI--EELQK 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 576 ELSSKVELLREKEDQIKKLQEyidsqKLENIKMDLSYSLESIEDPKQMKQTLfDAETVALDAKRESafLRSENLELKEKM 655
Cdd:TIGR02168 289 ELYALANEISRLEQQKQILRE-----RLANLERQLEELEAQLEELESKLDEL-AEELAELEEKLEE--LKEELESLEAEL 360
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 656 KELATTYKQMENDIQLYQSQLEAKKKMQVDLEKELQSAFNEITkltslidgkvpkdllcnlELEGKITDLQKELNKEVEE 735
Cdd:TIGR02168 361 EELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIE------------------RLEARLERLEDRRERLQQE 422
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 736 NEALREEvILLSELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLleeigktKDDLATTQSNYKST 815
Cdd:TIGR02168 423 IEELLKK-LEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAA-------ERELAQLQARLDSL 494
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 816 DQEFQNFktlhMDFEQKYKMVLEENERMNQeIVNLSKEAQKFDSSLG-ALKTELSYKTQELQEKTREVQERlnEMEQLKE 894
Cdd:TIGR02168 495 ERLQENL----EGFSEGVKALLKNQSGLSG-ILGVLSELISVDEGYEaAIEAALGGRLQAVVVENLNAAKK--AIAFLKQ 567
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 895 QLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIHDTvnmnidtqEQLRNALESLK 974
Cdd:TIGR02168 568 NELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLVV--------DDLDNALELAK 639
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 975 Q--HQETINTLKSKI--------SEEVSRNLHMEENTGETKDEFQQKMVGIDKKQDLEAKNTQTLTADVKDNEIIEQ-QR 1043
Cdd:TIGR02168 640 KlrPGYRIVTLDGDLvrpggvitGGSAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQlRK 719
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1044 KIFSLIQEKNELQQMLESVIAEKEQLKTDLKENIEMTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLA 1123
Cdd:TIGR02168 720 ELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELK 799
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1124 EVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKI----NEIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSIT 1199
Cdd:TIGR02168 800 ALREALDELRAELTLLNEEAANLRERLESLERRIaateRRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALL 879
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1200 KERKVLKELQKSFETERDHLRGYIREIEATGLQTKEELKIAHIHLKEHQETIDELRrsvsektAQIINTQDlekshtKLQ 1279
Cdd:TIGR02168 880 NERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLE-------VRIDNLQE------RLS 946
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1280 EEIPVLHEEQELLPNVKEvSETQETMNELELLTEQsttkdsttLARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKE 1359
Cdd:TIGR02168 947 EEYSLTLEEAEALENKIE-DDEEEARRRLKRLENK--------IKELGPVNLAAIEEYEELKERYDFLTAQKEDLTEAKE 1017
|
...
gi 767930917 1360 ALE 1362
Cdd:TIGR02168 1018 TLE 1020
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
542-1374 |
4.00e-18 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 92.04 E-value: 4.00e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 542 RKTKKDQEMQLIHEISNLKNLvkhaevynQDLENELSSKVELLREKEDQIKKLQEYidSQKLENIKMDLSY--------S 613
Cdd:TIGR02168 171 KERRKETERKLERTRENLDRL--------EDILNELERQLKSLERQAEKAERYKEL--KAELRELELALLVlrleelreE 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 614 LESIEDPKQMKQTLFDAETVALDAKRES-AFLRSENLELKEKMKELATTYKQMENDIQLYQSQLEAKKKMQVDLEKELQS 692
Cdd:TIGR02168 241 LEELQEELKEAEEELEELTAELQELEEKlEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEE 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 693 AFNEITKLTSLIDgkvpkDLLCNL-ELEGKITDLQKELNKEVEENEALREEV-ILLSELKSLPSEVERLRKEIQDKSEEL 770
Cdd:TIGR02168 321 LEAQLEELESKLD-----ELAEELaELEEKLEELKEELESLEAELEELEAELeELESRLEELEEQLETLRSKVAQLELQI 395
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 771 HIITSEKDKLFSEVVHKESRVQGLLEEIG-----KTKDDLATTQSNYKSTDQEFQNFKTLHMDFEQKYKMVLEENERMNQ 845
Cdd:TIGR02168 396 ASLNNEIERLEARLERLEDRRERLQQEIEellkkLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQ 475
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 846 EIVNLSKEAQKFDSSLGALKTELsyktQELQEKTREVQERLNEMEQLKeQLENRDSTLQTVERE-------------KTL 912
Cdd:TIGR02168 476 ALDAAERELAQLQARLDSLERLQ----ENLEGFSEGVKALLKNQSGLS-GILGVLSELISVDEGyeaaieaalggrlQAV 550
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 913 ITEKLQQTLEEVKTLTQEK---------DDLK-QLQESLQIERDQLKSDIHDTVNMNIDTQEQLRNALESLKQHQETINT 982
Cdd:TIGR02168 551 VVENLNAAKKAIAFLKQNElgrvtflplDSIKgTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLVVDD 630
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 983 LKSKIseEVSRNLHMEENTGETKDEFQQK---MVGIDKKQDLEAKNTQTLTADVKdNEIIEQQRKIFSLIQEKNELQQML 1059
Cdd:TIGR02168 631 LDNAL--ELAKKLRPGYRIVTLDGDLVRPggvITGGSAKTNSSILERRREIEELE-EKIEELEEKIAELEKALAELRKEL 707
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1060 ESVIAEKEQLKTDLKENIEMTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEK 1139
Cdd:TIGR02168 708 EELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEEL 787
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1140 QQQLLNVQEEMSEMQKKI----NEIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKERKVLKELQKSFETE 1215
Cdd:TIGR02168 788 EAQIEQLKEELKALREALdelrAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEEL 867
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1216 RDHLRGYIREIEATGLQTKEELKIAHIHLKEHQETIDELRRSVSEKTAQIINTQD-LEKSHTKLQEEIPVLHEEQELLPN 1294
Cdd:TIGR02168 868 IEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREkLAQLELRLEGLEVRIDNLQERLSE 947
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1295 vkEVSETQETMNELELLTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRE 1374
Cdd:TIGR02168 948 --EYSLTLEEAEALENKIEDDEEEARRRLKRLENKIKELGPVNLAAIEEYEELKERYDFLTAQKEDLTEAKETLEEAIEE 1025
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
880-1707 |
1.33e-17 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 90.51 E-value: 1.33e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 880 REVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIHDTVNMN 959
Cdd:TIGR02169 156 RKIIDEIAGVAEFDRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRREREKAERYQALLKEKREYEGYELLKEKEAL 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 960 IDTQEQLRNALESLKQHQETINTLKSKISEEVSR--------NLHMEENTGETKDEFQQKMVGIDKKQDLEAKNTQTLTA 1031
Cdd:TIGR02169 236 ERQKEAIERQLASLEEELEKLTEEISELEKRLEEieqlleelNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKER 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1032 DVKDNEiiEQQRKIFSLI----QEKNELQQMLESVIAEKEQLKTDLKE--NIEMTIENQ-----EELRLLGDELKKQQEI 1100
Cdd:TIGR02169 316 ELEDAE--ERLAKLEAEIdkllAEIEELEREIEEERKRRDKLTEEYAElkEELEDLRAEleevdKEFAETRDELKDYREK 393
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1101 VAQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIE-----------NLKNELKN 1169
Cdd:TIGR02169 394 LEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEwkleqlaadlsKYEQELYD 473
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1170 KELTLEHMETERLELAQKLNENYEEVKSITKERKVLKELQKSFETERDHLRGYIREI------EATGLQTKEELKIAHIH 1243
Cdd:TIGR02169 474 LKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQLgsvgerYATAIEVAAGNRLNNVV 553
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1244 LKEH---QETIDEL-RRSVSEKTAQIIN-----TQDLEKSHTK--LQEEIPVLHEEQELLPNVKEVSETQETMNELELLT 1312
Cdd:TIGR02169 554 VEDDavaKEAIELLkRRKAGRATFLPLNkmrdeRRDLSILSEDgvIGFAVDLVEFDPKYEPAFKYVFGDTLVVEDIEAAR 633
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1313 EQ------------------STTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRE 1374
Cdd:TIGR02169 634 RLmgkyrmvtlegelfeksgAMTGGSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSD 713
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1375 TLAKIQESQSKQEQSLNMKEKDNEttkivsEMEQFKPKDSAllrieiemlgLSKRLQESHDEMKSVAKEKDDLQRlqevl 1454
Cdd:TIGR02169 714 ASRKIGEIEKEIEQLEQEEEKLKE------RLEELEEDLSS----------LEQEIENVKSELKELEARIEELEE----- 772
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1455 qsESDQLKENIKEIVAKHLETEEELKVAHccLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEq 1534
Cdd:TIGR02169 773 --DLHKLEEALNDLEARLSHSRIPEIQAE--LSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKE- 847
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1535 fnikQISEVQEKVNELKQFKEhrkAKDSALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTK 1614
Cdd:TIGR02169 848 ----QIKSIEKEIENLNGKKE---ELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLS 920
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1615 EIVAKM--KESQEKEYQFLKMTAVNETQEKMCEiehlkeqfETQKLNLENIETENIRLTQILHENLEEMRSVTKERDDLR 1692
Cdd:TIGR02169 921 ELKAKLeaLEEELSEIEDPKGEDEEIPEEELSL--------EDVQAELQRVEEEIRALEPVNMLAIQEYEEVLKRLDELK 992
|
890
....*....|....*
gi 767930917 1693 SVEETLKVERDQLKE 1707
Cdd:TIGR02169 993 EKRAKLEEERKAILE 1007
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
715-1536 |
1.59e-17 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 90.12 E-value: 1.59e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 715 NLELEGKITDLQKELNKEVEENEALreevILLSELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGL 794
Cdd:TIGR02168 204 SLERQAEKAERYKELKAELRELELA----LLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSEL 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 795 LEEIGKTkddlattqsnykstDQEFQNFKTLHMDFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELS---YK 871
Cdd:TIGR02168 280 EEEIEEL--------------QKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAeleEK 345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 872 TQELQEKTREVQERLNEMEQLKEQLENRDSTLQT-VEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKS 950
Cdd:TIGR02168 346 LEELKEELESLEAELEELEAELEELESRLEELEEqLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEE 425
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 951 DIHDTVNMNIDTQ----EQLRNALESLKQHQETINTLKSKISEEVSRNlhmEENTGETKDEFQQKMVGIDKKQDLEAkNT 1026
Cdd:TIGR02168 426 LLKKLEEAELKELqaelEELEEELEELQEELERLEEALEELREELEEA---EQALDAAERELAQLQARLDSLERLQE-NL 501
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1027 QTLTADVKdnEIIEQQRKI-------FSLIQEKNELQQMLESVIAEKEQLKTD------------LKEN-------IEMT 1080
Cdd:TIGR02168 502 EGFSEGVK--ALLKNQSGLsgilgvlSELISVDEGYEAAIEAALGGRLQAVVVenlnaakkaiafLKQNelgrvtfLPLD 579
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1081 IENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRT----------CDRLAEVEEKLKEKSQQLQEKQQQLLNV---- 1146
Cdd:TIGR02168 580 SIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKAlsyllggvlvVDDLDNALELAKKLRPGYRIVTLDGDLVrpgg 659
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1147 ------QEEMSEMQKKINEIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKE-----------RKVLKELQ 1209
Cdd:TIGR02168 660 vitggsAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKEleelsrqisalRKDLARLE 739
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1210 KSFET---ERDHLRGYIREIEATGLQTKEELKIAHIHLKEHQETIDELRRSVsekTAQIINTQDLEKSHTKLQEEIPVLH 1286
Cdd:TIGR02168 740 AEVEQleeRIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQI---EQLKEELKALREALDELRAELTLLN 816
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1287 EEQELLPNVKEVSETQETMNELELLTEQSTTKD-STTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKH 1365
Cdd:TIGR02168 817 EEAANLRERLESLERRIAATERRLEDLEEQIEElSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSEL 896
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1366 DQLKEHIRETLAKIQESQSKqeqslnMKEKDNETTKIVSEMEqfkpkdsallRIEIEMLGLSKRLQESH-DEMKSVAKEK 1444
Cdd:TIGR02168 897 EELSEELRELESKRSELRRE------LEELREKLAQLELRLE----------GLEVRIDNLQERLSEEYsLTLEEAEALE 960
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1445 DDLQRLQEVLQSESDQLKENIKEIVAKHLETEEElkvahccLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNK 1524
Cdd:TIGR02168 961 NKIEDDEEEARRRLKRLENKIKELGPVNLAAIEE-------YEELKERYDFLTAQKEDLTEAKETLEEAIEEIDREARER 1033
|
890
....*....|...
gi 767930917 1525 IQEIYEK-EEQFN 1536
Cdd:TIGR02168 1034 FKDTFDQvNENFQ 1046
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
871-1622 |
1.89e-17 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 89.73 E-value: 1.89e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 871 KTQELQEKTREVQERL--NEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQL 948
Cdd:TIGR02168 214 RYKELKAELRELELALlvLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYAL 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 949 KSDIHDTVNMNIDTQEQLRNALESLKQHQETINTLKSKiSEEVSRNLH-MEENTGETKDEFQQKMVGIDKKQDLEAKNTQ 1027
Cdd:TIGR02168 294 ANEISRLEQQKQILRERLANLERQLEELEAQLEELESK-LDELAEELAeLEEKLEELKEELESLEAELEELEAELEELES 372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1028 TLTAdvKDNEIIEQQRKIFSLIQEKNELQQMLESVIAEKEQLKtdlkENIEMTIENQEEL--RLLGDELKKQQEIVAQEK 1105
Cdd:TIGR02168 373 RLEE--LEEQLETLRSKVAQLELQIASLNNEIERLEARLERLE----DRRERLQQEIEELlkKLEEAELKELQAELEELE 446
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1106 NHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENL----KNELKNKE-------LTL 1174
Cdd:TIGR02168 447 EELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFsegvKALLKNQSglsgilgVLS 526
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1175 EHMETER-----LELAQKLNENYEEVKSITKERKVLkELQKSFETERDHL----RGYIREIEATGLQTKEELKIAHIHLK 1245
Cdd:TIGR02168 527 ELISVDEgyeaaIEAALGGRLQAVVVENLNAAKKAI-AFLKQNELGRVTFlpldSIKGTEIQGNDREILKNIEGFLGVAK 605
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1246 EHQETIDELRRSVSEKTAQIINTQDLEKSHTKLQEEIP----------------------------VLHEEQELLPNVKE 1297
Cdd:TIGR02168 606 DLVKFDPKLRKALSYLLGGVLVVDDLDNALELAKKLRPgyrivtldgdlvrpggvitggsaktnssILERRREIEELEEK 685
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1298 VSETQETMNELE-----LLTEQSTTKDSTTLARIEMERL------------RLNEKFQESQEEIKSLTKERDNLKTIKEA 1360
Cdd:TIGR02168 686 IEELEEKIAELEkalaeLRKELEELEEELEQLRKELEELsrqisalrkdlaRLEAEVEQLEERIAQLSKELTELEAEIEE 765
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1361 LEVKHDQLKEHIRETLAKIQESQSKQEQSLNMKEKDNETTKIVSEMEQ-----FKPKDSALLRIEIEMLGLSKRLQESHD 1435
Cdd:TIGR02168 766 LEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTllneeAANLRERLESLERRIAATERRLEDLEE 845
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1436 EMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNLSEKETEISTIQKQLE 1515
Cdd:TIGR02168 846 QIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLA 925
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1516 AINDKLQNKIQEIYEKEEQFNIKQISEVQEkvnelkqFKEHRKAKDSALQSIESKMLELTNRLQE-------SQEEIQIM 1588
Cdd:TIGR02168 926 QLELRLEGLEVRIDNLQERLSEEYSLTLEE-------AEALENKIEDDEEEARRRLKRLENKIKElgpvnlaAIEEYEEL 998
|
810 820 830
....*....|....*....|....*....|....
gi 767930917 1589 IKEKEEMKRVQEALQIERDQLKENTKEIVAKMKE 1622
Cdd:TIGR02168 999 KERYDFLTAQKEDLTEAKETLEEAIEEIDREARE 1032
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
646-1468 |
1.61e-16 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 86.66 E-value: 1.61e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 646 SENLELKEKMKELATTYKQMENDIQLYQ-----SQLEAKKKMQVDLEKELQSAFNEITKLTSLIDGKvpkdllcNLELEg 720
Cdd:TIGR02169 197 RQQLERLRREREKAERYQALLKEKREYEgyellKEKEALERQKEAIERQLASLEEELEKLTEEISEL-------EKRLE- 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 721 KITDLQKELNKEVEEnEALREEVILLSELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGK 800
Cdd:TIGR02169 269 EIEQLLEELNKKIKD-LGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEE 347
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 801 TKDDLATTQSNYKSTDQEFqnfktlhMDFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTR 880
Cdd:TIGR02169 348 ERKRRDKLTEEYAELKEEL-------EDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSE 420
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 881 EVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIHD---TVN 957
Cdd:TIGR02169 421 ELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEaeaQAR 500
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 958 MNIDTQEQLRNALESLKQHQETI-NTLKSKISEEVSRNLHMEENTGetkdefqQKMVGIDKKQDLEAKNTQTLTADVKDN 1036
Cdd:TIGR02169 501 ASEERVRGGRAVEEVLKASIQGVhGTVAQLGSVGERYATAIEVAAG-------NRLNNVVVEDDAVAKEAIELLKRRKAG 573
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1037 EI-------IEQQRKIFSLIQEKNELQQMLESVIAEKEQLK--------TDLKENIEMTIENQEELRLL---GDELKKQQ 1098
Cdd:TIGR02169 574 RAtflplnkMRDERRDLSILSEDGVIGFAVDLVEFDPKYEPafkyvfgdTLVVEDIEAARRLMGKYRMVtleGELFEKSG 653
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1099 EIV------AQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENlknelknkel 1172
Cdd:TIGR02169 654 AMTggsrapRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEK---------- 723
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1173 tlehmetERLELAQKLNENYEEVKSITKERKVLKELQKSFETERDHLRGYIREIEATGLQTKEEL-----KIAHIHLKEH 1247
Cdd:TIGR02169 724 -------EIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALndleaRLSHSRIPEI 796
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1248 QETIDELRRSVSEKTAQIintQDLEKSHTKLQEEIPVLHEEQELLPNVKEVSETQETMN--ELELLTEQSTTKDStTLAR 1325
Cdd:TIGR02169 797 QAELSKLEEEVSRIEARL---REIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIekEIENLNGKKEELEE-ELEE 872
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1326 IEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQSLNMKEKDNETTKIVSE 1405
Cdd:TIGR02169 873 LEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELS 952
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 767930917 1406 MEQFKPKdsaLLRIEIEMLGLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEI 1468
Cdd:TIGR02169 953 LEDVQAE---LQRVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAILERIEEY 1012
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
1052-1878 |
2.57e-16 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 85.94 E-value: 2.57e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1052 KNELQQMLESVIAEKEQLKTDLKENIEMTIENQEELRllgdelkkQQEIVAQEKNHAIKKEGE-LSRTCDRLAEVEEKLK 1130
Cdd:pfam15921 73 KEHIERVLEEYSHQVKDLQRRLNESNELHEKQKFYLR--------QSVIDLQTKLQEMQMERDaMADIRRRESQSQEDLR 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1131 EKSQQLQEKQQQLLNVQEEMseMQKKINEIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSI---------TKE 1201
Cdd:pfam15921 145 NQLQNTVHELEAAKCLKEDM--LEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFEEASGKKIYEHDSMstmhfrslgSAI 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1202 RKVLKELqksfETERDHLRGYIREIE--ATGLQTKEELKIaHIHLKEHQETIDELrrsVSEKTAQIINTQDLEKSH---- 1275
Cdd:pfam15921 223 SKILREL----DTEISYLKGRIFPVEdqLEALKSESQNKI-ELLLQQHQDRIEQL---ISEHEVEITGLTEKASSArsqa 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1276 TKLQEEIPVLHEE--QELLPNVKEVSETQETMNELELLTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKERDN 1353
Cdd:pfam15921 295 NSIQSQLEIIQEQarNQNSMYMRQLSDLESTVSQLRSELREAKRMYEDKIEELEKQLVLANSELTEARTERDQFSQESGN 374
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1354 LKtikealevkhDQLKEHIRETLAKIQESQSKQEQSLNMKEKDNETTKIVSEME-QFKPKDSALLRIEIEMLGLSKRLQ- 1431
Cdd:pfam15921 375 LD----------DQLQKLLADLHKREKELSLEKEQNKRLWDRDTGNSITIDHLRrELDDRNMEVQRLEALLKAMKSECQg 444
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1432 ESHDEMKSVAKEKDDLQRLQEvLQSESDQLKENIKEIVakhleteEELKVAHCCLKEQEETINELRVNLSEKETEISTIQ 1511
Cdd:pfam15921 445 QMERQMAAIQGKNESLEKVSS-LTAQLESTKEMLRKVV-------EELTAKKMTLESSERTVSDLTASLQEKERAIEATN 516
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1512 KQLEAINDKLQNKIQEIyekeeqfnikqisevqekvNELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQIMIKE 1591
Cdd:pfam15921 517 AEITKLRSRVDLKLQEL-------------------QHLKNEGDHLRNVQTECEALKLQMAEKDKVIEILRQQIENMTQL 577
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1592 KEEMKRVQEALQIERDQLKentKEIVAKMKESQekEYQFLKmtavNETQEKMCEIEHLKEQFETQKLNLENIETENIR-L 1670
Cdd:pfam15921 578 VGQHGRTAGAMQVEKAQLE---KEINDRRLELQ--EFKILK----DKKDAKIRELEARVSDLELEKVKLVNAGSERLRaV 648
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1671 TQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETITRDLKIQEELRIAHMHLKEQQETIDKLRGIVSEKTDK 1750
Cdd:pfam15921 649 KDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELEQTRNTLKSMEGSDGHAMKV 728
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1751 LSNMQKDLENSNAK---LQEKIQELkanEHQLITLKKdvnetqkkvsEMEQLKKQIKDQSLTLSKLEIENlnlaQKLHEN 1827
Cdd:pfam15921 729 AMGMQKQITAKRGQidaLQSKIQFL---EEAMTNANK----------EKHFLKEEKNKLSQELSTVATEK----NKMAGE 791
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|.
gi 767930917 1828 LEEMKSvmKERdnlRRVEETLKLERDQLKESLQETKARDLEIQQELKTARM 1878
Cdd:pfam15921 792 LEVLRS--QER---RLKEKVANMEVALDKASLQFAECQDIIQRQEQESVRL 837
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
964-1832 |
5.90e-16 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 85.12 E-value: 5.90e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 964 EQLRNALESLKQHQETINTLKSKIsEEVSRNLHMEENTGETKDEFQQKMvgiDKKQDLEAkntqtlTADVKDNEIIEQQR 1043
Cdd:TIGR02169 170 RKKEKALEELEEVEENIERLDLII-DEKRQQLERLRREREKAERYQALL---KEKREYEG------YELLKEKEALERQK 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1044 kifsliqeknelqQMLESVIAEKEQLKTDLKENIEMTIENQEELRLLGDELKKQQEIVAQEKNHAIKK-----EGELSRT 1118
Cdd:TIGR02169 240 -------------EAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKEkigelEAEIASL 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1119 CDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEI----ENLKNELKNKELTLEHMETERLELAQKLNENYEE 1194
Cdd:TIGR02169 307 ERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEErkrrDKLTEEYAELKEELEDLRAELEEVDKEFAETRDE 386
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1195 VKSITKERKVLKELQKSFETERDHLRGYIREIEATGLQTKEELKIAHIHLKEHQETIDELRRSVSEKTAQIINTQ----D 1270
Cdd:TIGR02169 387 LKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAadlsK 466
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1271 LEKSHTKLQEEIPVLHEEQELLPnvKEVSETQETMNELEllTEQSTTKDSTTL--ARIE------MERLRLNEKFQESQE 1342
Cdd:TIGR02169 467 YEQELYDLKEEYDRVEKELSKLQ--RELAEAEAQARASE--ERVRGGRAVEEVlkASIQgvhgtvAQLGSVGERYATAIE 542
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1343 -----EIKSLTKERDNlkTIKEALEVkhdqLKEHI--RET---LAKIQESQSKQEQS---------LNMKEKDNE----- 1398
Cdd:TIGR02169 543 vaagnRLNNVVVEDDA--VAKEAIEL----LKRRKagRATflpLNKMRDERRDLSILsedgvigfaVDLVEFDPKyepaf 616
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1399 -----TTKIVSEMEQFKPkdsalLRIEIEMLGLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIvakhl 1473
Cdd:TIGR02169 617 kyvfgDTLVVEDIEAARR-----LMGKYRMVTLEGELFEKSGAMTGGSRAPRGGILFSRSEPAELQRLRERLEGL----- 686
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1474 etEEELKVAHCCLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQfnikqisevqekvneLKQF 1553
Cdd:TIGR02169 687 --KRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEED---------------LSSL 749
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1554 KEHRKAKDSALQSIESKMLELTNRLQESQEEIQiMIKEKEEMKRVQEaLQIERDQLKENTKEIVAKMK--ESQEKEYQFL 1631
Cdd:TIGR02169 750 EQEIENVKSELKELEARIEELEEDLHKLEEALN-DLEARLSHSRIPE-IQAELSKLEEEVSRIEARLReiEQKLNRLTLE 827
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1632 KMTAVNETQEKMCEIEHLKEQFETQKLNLENIETENIRLTQILHENLEEMRSVTKERDDLRSveetlkvERDQLKENLRE 1711
Cdd:TIGR02169 828 KEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKK-------ERDELEAQLRE 900
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1712 TITRDLKIQEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLEN--SNAKLQEKIQELKANEHQLitlkKDVNet 1789
Cdd:TIGR02169 901 LERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEelSLEDVQAELQRVEEEIRAL----EPVN-- 974
|
890 900 910 920
....*....|....*....|....*....|....*....|...
gi 767930917 1790 QKKVSEMEQLKKQIKDQSLTLSKLEIENLNLaQKLHENLEEMK 1832
Cdd:TIGR02169 975 MLAIQEYEEVLKRLDELKEKRAKLEEERKAI-LERIEEYEKKK 1016
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1335-1954 |
1.29e-15 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 83.83 E-value: 1.29e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1335 EKFQESQEEIK-----SLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQslnmkekdnETTKIVSEMEQF 1409
Cdd:COG1196 213 ERYRELKEELKeleaeLLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEE---------LRLELEELELEL 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1410 KPKDSALLRIEIEMLGLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEElkvahccLKEQ 1489
Cdd:COG1196 284 EEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEE-------LEEA 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1490 EETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQFNIKQISEvQEKVNELKQFKEHRKAKDSALQSIES 1569
Cdd:COG1196 357 EAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAE-EALLERLERLEEELEELEEALAELEE 435
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1570 KMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKMKESQEKEYQFLKMTAVNETQEKMCEIEHL 1649
Cdd:COG1196 436 EEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALL 515
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1650 KEQFE--TQKLNLENIETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETITRDLKIQEELRiah 1727
Cdd:COG1196 516 LAGLRglAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAAL--- 592
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1728 mhlkeQQETIDKLRGIVSEKTDKLSNMQKDLENSnakLQEKIQELKANEHQLITLKKDVNETQKKVSEMEqlkkqikDQS 1807
Cdd:COG1196 593 -----ARGAIGAAVDLVASDLREADARYYVLGDT---LLGRTLVAARLEAALRRAVTLAGRLREVTLEGE-------GGS 657
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1808 LTLSKLEIENLNLAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKTARMLSKEHKETV 1887
Cdd:COG1196 658 AGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREEL 737
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 767930917 1888 DKLREKISEKTIQISDIQKDLDKSKDELQKKIQELqKKELQLLrvkEDVNMshKKINEMEQLKKQFE 1954
Cdd:COG1196 738 LEELLEEEELLEEEALEELPEPPDLEELERELERL-EREIEAL---GPVNL--LAIEEYEELEERYD 798
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1006-1552 |
4.21e-15 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 81.91 E-value: 4.21e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1006 DEFQQKMVGIDKKQDLEAKNTQTLTADV--KDNEIIEQQRKIFSLIQEKNELQQMLESVIAEKEQLKTDLKENIEMTIEN 1083
Cdd:COG1196 235 RELEAELEELEAELEELEAELEELEAELaeLEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRREL 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1084 QEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENL 1163
Cdd:COG1196 315 EERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRA 394
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1164 KNELKNKELTLEHMETERLELAQKLNENYEEVKSITKERKVLKELQKSFETERDHLRgyiREIEATGLQTKEELKIAHIH 1243
Cdd:COG1196 395 AAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEE---AELEEEEEALLELLAELLEE 471
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1244 LKEHQETIDELRRSVSEKTAQIINTQDLEKSHTKLQEEIPVLHEEQELLPNVKEVSETQETMNELELLTEqsttkdsTTL 1323
Cdd:COG1196 472 AALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALE-------AAL 544
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1324 ARIEMERLRLNEkfQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQSlnmKEKDNETTKIV 1403
Cdd:COG1196 545 AAALQNIVVEDD--EVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDL---READARYYVLG 619
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1404 SEMEQFKPKDSALLRIEIEMLGLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAH 1483
Cdd:COG1196 620 DTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEAL 699
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 767930917 1484 CCLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQFNIKQ------ISEVQEKVNELKQ 1552
Cdd:COG1196 700 LAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEElpeppdLEELERELERLER 774
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1264-1873 |
6.04e-15 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 81.26 E-value: 6.04e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1264 QIINTQDLEKSHTKLQEEIPVLHEEQEllpNVKEVSETQETMNELELLTEQSTTKDSTTLARIEMERLRLNEKFqesqEE 1343
Cdd:PRK03918 153 QILGLDDYENAYKNLGEVIKEIKRRIE---RLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREEL----EK 225
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1344 IKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQSlnmKEKDNETTKIVSEMEQFKPKdsallriEIEM 1423
Cdd:PRK03918 226 LEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEEL---KKEIEELEEKVKELKELKEK-------AEEY 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1424 LGLSKRLQESHDEMKSVAKEKDDLQRLQEVLQ---SESDQLKENIKEIVAKHLETEEELKVahccLKEQEETINELRvnl 1500
Cdd:PRK03918 296 IKLSEFYEEYLDELREIEKRLSRLEEEINGIEeriKELEEKEERLEELKKKLKELEKRLEE----LEERHELYEEAK--- 368
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1501 sEKETEISTIQKQLEAIN-DKLQNKIQEIYEKEEQFNiKQISEVQEKVNELKQFKEHRKAKDSALQSIESKmLELTNRLQ 1579
Cdd:PRK03918 369 -AKKEELERLKKRLTGLTpEKLEKELEELEKAKEEIE-EEISKITARIGELKKEIKELKKAIEELKKAKGK-CPVCGREL 445
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1580 ESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKMKE-SQEKEYQFLKMTA--VNETQEKMC-----EIEHLKE 1651
Cdd:PRK03918 446 TEEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVlKKESELIKLKELAeqLKELEEKLKkynleELEKKAE 525
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1652 QFETQKLNLENIETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETITR-DLKIQE--------- 1721
Cdd:PRK03918 526 EYEKLKEKLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEELGFESVEElEERLKElepfyneyl 605
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1722 ELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHqlitlKKDVNETQKKVSEMEQLKK 1801
Cdd:PRK03918 606 ELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEEEY-----EELREEYLELSRELAGLRA 680
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 767930917 1802 QIKdqslTLSKLEIENLNLAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQQEL 1873
Cdd:PRK03918 681 ELE----ELEKRREEIKKTLEKLKEELEEREKAKKELEKLEKALERVEELREKVKKYKALLKERALSKVGEI 748
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
717-1280 |
6.68e-15 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 81.26 E-value: 6.68e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 717 ELEGKITDLQKELNKEVEENEALREeviLLSELKSLPSEVERLRKEIQDKSEELHIITSEK---DKLFSEVVHKESRVQG 793
Cdd:PRK03918 173 EIKRRIERLEKFIKRTENIEELIKE---KEKELEEVLREINEISSELPELREELEKLEKEVkelEELKEEIEELEKELES 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 794 LLEEIGKTKDDLATTQSNYKSTDQEFQNFKTLHMDFEQ------KYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTE 867
Cdd:PRK03918 250 LEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKElkekaeEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEER 329
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 868 LSyKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITE-KLQQTLEEVKTLTQEKDDLKQLQESLQIERD 946
Cdd:PRK03918 330 IK-ELEEKEERLEELKKKLKELEKRLEELEERHELYEEAKAKKEELERlKKRLTGLTPEKLEKELEELEKAKEEIEEEIS 408
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 947 QLKSDIHDTVNMnidtQEQLRNALESLKQHQETINTLKSKISEEVSRNLhMEENTGETKDEFQQKMVGIDKKQDLEAKnt 1026
Cdd:PRK03918 409 KITARIGELKKE----IKELKKAIEELKKAKGKCPVCGRELTEEHRKEL-LEEYTAELKRIEKELKEIEEKERKLRKE-- 481
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1027 qtltaDVKDNEIIEQQRKIFSliqekneLQQMLESVIAEKEQLKTDLKENIEMTIENQEELRLLGDELKKQQEIVAQEKN 1106
Cdd:PRK03918 482 -----LRELEKVLKKESELIK-------LKELAEQLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELE 549
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1107 HAIKKEGELSRTCDRLAEVEEKLKE-KSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNKELTLEHMETERLELA 1185
Cdd:PRK03918 550 KLEELKKKLAELEKKLDELEEELAElLKELEELGFESVEELEERLKELEPFYNEYLELKDAEKELEREEKELKKLEEELD 629
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1186 QKLNENYEEVKSITKERKVLKELQKSF-ETERDHLRGYIREIEATGLQTKEELKIAHIHLKEHQETIDELRRSVSEKTAQ 1264
Cdd:PRK03918 630 KAFEELAETEKRLEELRKELEELEKKYsEEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREKA 709
|
570
....*....|....*.
gi 767930917 1265 IINTQDLEKSHTKLQE 1280
Cdd:PRK03918 710 KKELEKLEKALERVEE 725
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1244-2076 |
1.20e-14 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 80.50 E-value: 1.20e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1244 LKEHQETIDELRRSVSEKTAQIintqdlekshTKLQEEIPVLHEEQELLPNVKEVsETQETMNELELLTEQSTTKDSTtL 1323
Cdd:TIGR02169 179 LEEVEENIERLDLIIDEKRQQL----------ERLRREREKAERYQALLKEKREY-EGYELLKEKEALERQKEAIERQ-L 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1324 ARIEMERLRLNEKFQESQEEIKSLTKERDNL-KTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQS-LNMKEKDNETTK 1401
Cdd:TIGR02169 247 ASLEEELEKLTEEISELEKRLEEIEQLLEELnKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKeRELEDAEERLAK 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1402 IVSEMEqfkpkdsallRIEIEMLGLSKRLQEshdemksVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKV 1481
Cdd:TIGR02169 327 LEAEID----------KLLAEIEELEREIEE-------ERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKD 389
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1482 AHCCLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQFNIKQiSEVQEKVNELKQFKEHRKAKD 1561
Cdd:TIGR02169 390 YREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKA-LEIKKQEWKLEQLAADLSKYE 468
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1562 SALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKMKE--SQEKEYQF-LKMTAVNE 1638
Cdd:TIGR02169 469 QELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQlgSVGERYATaIEVAAGNR 548
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1639 TQEKMCEIEhlkeqfETQKLNLENIETENI-RLTQIlheNLEEMRSvtKERDDLRSVEETLK------VERDQLKENLRE 1711
Cdd:TIGR02169 549 LNNVVVEDD------AVAKEAIELLKRRKAgRATFL---PLNKMRD--ERRDLSILSEDGVIgfavdlVEFDPKYEPAFK 617
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1712 TITRDLKIQEELRIAHMHLKEQQetIDKLRGIVSEKTDKL---SNMQKDLENSNAKLQEKIQELKaneHQLITLKKDVNE 1788
Cdd:TIGR02169 618 YVFGDTLVVEDIEAARRLMGKYR--MVTLEGELFEKSGAMtggSRAPRGGILFSRSEPAELQRLR---ERLEGLKRELSS 692
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1789 TQKKVSEMEQLKKQikdqsltlskleienlnLAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLE 1868
Cdd:TIGR02169 693 LQSELRRIENRLDE-----------------LSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIEN 755
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1869 IQQELKTARMLSKEHKETVDKLREKISEktIQISDIQKDLDKSKDELQKKIQELQKKELQLLRVKEDVNMSHKKINEMEQ 1948
Cdd:TIGR02169 756 VKSELKELEARIEELEEDLHKLEEALND--LEARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEK 833
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1949 LKKQFEAQNLSMQSVRMDNFQ----LTKKLHESLEEIRIVAKERDELRRIKESLKMERDQFIATLREM-IARDRQNHQVK 2023
Cdd:TIGR02169 834 EIQELQEQRIDLKEQIKSIEKeienLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELeRKIEELEAQIE 913
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|...
gi 767930917 2024 PEKRLLSDgqqhLTESLREKCSRIKELLKRYSEMDDHYECLNRLSlDLEKEIE 2076
Cdd:TIGR02169 914 KKRKRLSE----LKAKLEALEEELSEIEDPKGEDEEIPEEELSLE-DVQAELQ 961
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1323-1922 |
2.14e-14 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 79.60 E-value: 2.14e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1323 LARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQslnmkekdnETTKI 1402
Cdd:COG1196 234 LRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELAR---------LEQDI 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1403 VSEMEQFKPKDSALLRIEIEMLGLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKva 1482
Cdd:COG1196 305 ARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELE-- 382
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1483 hcclkEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQfNIKQISEVQEKVNELKQFKEHRKAKDS 1562
Cdd:COG1196 383 -----ELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEA-LAELEEEEEEEEEALEEAAEEEAELEE 456
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1563 ALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKMKESQ---------------EKE 1627
Cdd:COG1196 457 EEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGlrglagavavligveAAY 536
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1628 YQFLKMTAVNETQEKMCE--------IEHLKEQFETQKLNLENIETENIRLTQILHENLEEMRSVTKERDDLRSVEETLK 1699
Cdd:COG1196 537 EAALEAALAAALQNIVVEddevaaaaIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYY 616
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1700 VERDQLKENLRETITRDLKIQEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQL 1779
Cdd:COG1196 617 VLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELE 696
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1780 ITLKKDVNETQKKVSEMEQLKKQIKDQSLTLSKLEIENLNLAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQLKESL 1859
Cdd:COG1196 697 EALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREI 776
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 767930917 1860 QETKARDLEIQQELKTarmLSKEHKETVDKLrekisektiqisdiqKDLDKSKDELQKKIQEL 1922
Cdd:COG1196 777 EALGPVNLLAIEEYEE---LEERYDFLSEQR---------------EDLEEARETLEEAIEEI 821
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
832-1381 |
1.29e-13 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 77.28 E-value: 1.29e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 832 KYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKT 911
Cdd:COG1196 233 KLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRR 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 912 LITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIHDTVNMNIDTQEQLRNALESLKQHQETINTLKSKISEEV 991
Cdd:COG1196 313 ELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEAL 392
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 992 SRNLHMEENTGETKDEFQQKMVGIDK-KQDLEAKNTQTLTADVKDNEIIEQQRKIFSLIQEKNELQQMLESVIAEKEQLK 1070
Cdd:COG1196 393 RAAAELAAQLEELEEAEEALLERLERlEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEA 472
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1071 TDLKENIEMTIENQEELRLLGDELKKQQEIVAQE-----KNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLN 1145
Cdd:COG1196 473 ALLEAALAELLEELAEAAARLLLLLEAEADYEGFlegvkAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIV 552
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1146 VQEEMSEMQkkinEIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKERKVLKELQKSFETERDHLRGYIRE 1225
Cdd:COG1196 553 VEDDEVAAA----AIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLV 628
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1226 IEAtglqtkEELKIAHIHLKEHQETIDELRRSVSEKTAQIINTQDLEKSHTKLQEEIPVLHEEQELLPNVKEVSETQETM 1305
Cdd:COG1196 629 AAR------LEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAE 702
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 767930917 1306 NELELLTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQE 1381
Cdd:COG1196 703 EEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEA 778
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1487-2289 |
1.67e-13 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 77.02 E-value: 1.67e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1487 KEQEETINELRVNLSEKETEISTIQKQLEAIndKLQNKIQEIY-EKEEQFNIKQISEVqekVNELKQFKEHRKAKDSALQ 1565
Cdd:TIGR02168 175 KETERKLERTRENLDRLEDILNELERQLKSL--ERQAEKAERYkELKAELRELELALL---VLRLEELREELEELQEELK 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1566 SIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEivakmKESQEKEYQFLKMTAVNETQEKMCE 1645
Cdd:TIGR02168 250 EAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISR-----LEQQKQILRERLANLERQLEELEAQ 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1646 IEHLKEQFETQKLNLENIETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETITRDLKIQEELRI 1725
Cdd:TIGR02168 325 LEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIER 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1726 AHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDlensnaKLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQLKKQIKD 1805
Cdd:TIGR02168 405 LEARLERLEDRRERLQQEIEELLKKLEEAELK------ELQAELEELEEELEELQEELERLEEALEELREELEEAEQALD 478
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1806 Q---SLTLSKLEIENLNLAQKLHENL-EEMKSVMKERD----------NLRRVEETLKLERDQ-LKESLQ----ETKARD 1866
Cdd:TIGR02168 479 AaerELAQLQARLDSLERLQENLEGFsEGVKALLKNQSglsgilgvlsELISVDEGYEAAIEAaLGGRLQavvvENLNAA 558
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1867 LEIQQELKTARM-------LSKEHKETVDKLREKISEKTIQISDIQKDLDKSKDELQKKIQELqkkeLQLLRVKEDVNMS 1939
Cdd:TIGR02168 559 KKAIAFLKQNELgrvtflpLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYL----LGGVLVVDDLDNA 634
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1940 HKKINEMEQ-----------------LKKQFEAQNLSMQSVRMDNFQLTKKLHESLEEIRIVAKERDELRRIKESLKMER 2002
Cdd:TIGR02168 635 LELAKKLRPgyrivtldgdlvrpggvITGGSAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEEL 714
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2003 DQFIATLREMiarDRQNHQVKPEKRLLSDGQQHLTESLREKCSRIKELLKRYSEMDDHYECLNRLSLDLEKEIEFQKELS 2082
Cdd:TIGR02168 715 EQLRKELEEL---SRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQI 791
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2083 MRVKANLSLpylQTKHIEKLFTANQRCSMEFHRIMKKLKYVlsyvtkikEEQHESINKFEMDFIDEVEKQKELLIKIQHL 2162
Cdd:TIGR02168 792 EQLKEELKA---LREALDELRAELTLLNEEAANLRERLESL--------ERRIAATERRLEDLEEQIEELSEDIESLAAE 860
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2163 QQDCDVPSRELRD-LKLNQNMDLHIEEILKDfSESEFPSIKTEFQQVLSNRKEMTQFLEEwLNTRfdIEKLKNGIQKEND 2241
Cdd:TIGR02168 861 IEELEELIEELESeLEALLNERASLEEALAL-LRSELEELSEELRELESKRSELRRELEE-LREK--LAQLELRLEGLEV 936
|
810 820 830 840
....*....|....*....|....*....|....*....|....*...
gi 767930917 2242 RICQVNNFFNNRIIAIMNESTEFEERSATISKEWEQDLKSLKEKNEKL 2289
Cdd:TIGR02168 937 RIDNLQERLSEEYSLTLEEAEALENKIEDDEEEARRRLKRLENKIKEL 984
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1074-1707 |
4.37e-13 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 75.49 E-value: 4.37e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1074 KENIEMTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEM 1153
Cdd:PRK03918 178 IERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEKELESLEGSKRKL 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1154 QKKINEIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKERKVLKELQKSFETERDHLRGYIREIEAtgLQT 1233
Cdd:PRK03918 258 EEKIRELEERIEELKKEIEELEEKVKELKELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKE--LEE 335
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1234 KEElkiahiHLKEHQETIDELRRSVSEktaqiintqdLEKSHtKLQEEIPVLHEEQELLPNVKEVSETQETMNELELLTE 1313
Cdd:PRK03918 336 KEE------RLEELKKKLKELEKRLEE----------LEERH-ELYEEAKAKKEELERLKKRLTGLTPEKLEKELEELEK 398
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1314 QSTTkdsttlarIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLakiqesqsKQEQSLNMK 1393
Cdd:PRK03918 399 AKEE--------IEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELTEEHRKEL--------LEEYTAELK 462
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1394 EKDNETTKIVSEMEQFKPKdsaLLRIEIEMLGLSK--RLQESHDEMKSVAKEkddlqrLQEVLQSESDQLKENIKEIVAK 1471
Cdd:PRK03918 463 RIEKELKEIEEKERKLRKE---LRELEKVLKKESEliKLKELAEQLKELEEK------LKKYNLEELEKKAEEYEKLKEK 533
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1472 HLETEEELKVahccLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLqnkiqeiyekeEQFNIKQISEVQEKVNELK 1551
Cdd:PRK03918 534 LIKLKGEIKS----LKKELEKLEELKKKLAELEKKLDELEEELAELLKEL-----------EELGFESVEELEERLKELE 598
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1552 QFKEhrkakdsalqsiesKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKMKESQEKEYQFL 1631
Cdd:PRK03918 599 PFYN--------------EYLELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEEEYEEL 664
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 767930917 1632 KmtavNETQEKMCEIEHLKEQFETqklnLENIETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKE 1707
Cdd:PRK03918 665 R----EEYLELSRELAGLRAELEE----LEKRREEIKKTLEKLKEELEEREKAKKELEKLEKALERVEELREKVKK 732
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
964-1550 |
4.56e-13 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 75.10 E-value: 4.56e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 964 EQLRNALESLKQHQETINTLKSKISEEVSRNLHMEENTGETKDEFQQKMVGIDKKQDLEAKNTQTLTADVKDNEIIEQQR 1043
Cdd:PRK03918 158 DDYENAYKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELK 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1044 KIFsliqekNELQQMLESVIAEKEQLKTDLKENIEMTIENQEELRLLGDELKKQQEIVAQEKNHaIKKEGELSRTCDRLA 1123
Cdd:PRK03918 238 EEI------EELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKEKAEEY-IKLSEFYEEYLDELR 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1124 EVEEKLKEKSqqlqekqQQLLNVQEEMSEMQKKINEIENLKNELKNKELTLEHMET--ERLELAQKLNENYEEVKS---- 1197
Cdd:PRK03918 311 EIEKRLSRLE-------EEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEErhELYEEAKAKKEELERLKKrltg 383
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1198 -----ITKERKVLKELQKSFETERDHLRGYIREIEatglQTKEELKIAHIHLKEHQETIDELRRSVSEK---------TA 1263
Cdd:PRK03918 384 ltpekLEKELEELEKAKEEIEEEISKITARIGELK----KEIKELKKAIEELKKAKGKCPVCGRELTEEhrkelleeyTA 459
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1264 QIIN-TQDLEKSHTKLQEEIPVLHEEQELLPNVKEVSETQETMNELELLTEQSTTKDSTTLARIEMERLRLNEKFQESQE 1342
Cdd:PRK03918 460 ELKRiEKELKEIEEKERKLRKELRELEKVLKKESELIKLKELAEQLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKG 539
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1343 EIKSLTKERDNLKTIK---EALEVKHDQLKEHIRETLAKIQESQSKQEQSLNMKekdnettkiVSEMEQFKPKDSALLRI 1419
Cdd:PRK03918 540 EIKSLKKELEKLEELKkklAELEKKLDELEEELAELLKELEELGFESVEELEER---------LKELEPFYNEYLELKDA 610
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1420 EIEMLGLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLK-----ENIKEIVAKHLETEEELKVAHCCLKEQEETIN 1494
Cdd:PRK03918 611 EKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEkkyseEEYEELREEYLELSRELAGLRAELEELEKRRE 690
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*...
gi 767930917 1495 ELRVNLSEKETEISTIQKQLEAIND--KLQNKIQEIYEKEEQFNIKQISEVQEKVNEL 1550
Cdd:PRK03918 691 EIKKTLEKLKEELEEREKAKKELEKleKALERVEELREKVKKYKALLKERALSKVGEI 748
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
512-1265 |
1.55e-12 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 73.56 E-value: 1.55e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 512 LDYEQLRTEKEEMELKLKekndLDEFEALERktkkdQEMQLIHEISNLKNLVKHAEVYNQDLENELSSKVELLREKEDQI 591
Cdd:TIGR02169 211 ERYQALLKEKREYEGYEL----LKEKEALER-----QKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKI 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 592 KKL--QEYIDSQ-KLENIKMDLSySLESIEDPKQMKQTLFDAETVALDAKRESAFLRSENLE------------LKEKMK 656
Cdd:TIGR02169 282 KDLgeEEQLRVKeKIGELEAEIA-SLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEreieeerkrrdkLTEEYA 360
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 657 ELATTYKQMENDIQLYQSQLEAKKKMQVDLEKELQSAFNEITKLTSLIDGKVPKDLLCN---LELEGKITDLQKELNKEV 733
Cdd:TIGR02169 361 ELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSeelADLNAAIAGIEAKINELE 440
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 734 EENEALREEVILLS-ELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEE----------IGKTK 802
Cdd:TIGR02169 441 EEKEDKALEIKKQEwKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERvrggraveevLKASI 520
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 803 DDLATTQSNYKSTDQEFQnfKTLHMDFEQKYKMVLEENERMNQEIVNLSKE---------------AQKFDSSLGALKTE 867
Cdd:TIGR02169 521 QGVHGTVAQLGSVGERYA--TAIEVAAGNRLNNVVVEDDAVAKEAIELLKRrkagratflplnkmrDERRDLSILSEDGV 598
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 868 LSYKTQ--ELQEKTREVQER-------LNEMEQLKEQLEN-RDSTL--QTVER----------EKTLITEKLQQtLEEVK 925
Cdd:TIGR02169 599 IGFAVDlvEFDPKYEPAFKYvfgdtlvVEDIEAARRLMGKyRMVTLegELFEKsgamtggsraPRGGILFSRSE-PAELQ 677
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 926 TLTQEKDDLKQLQESLQIERDQLKSDIHDTVNMNIDTQEQLRNALESLKQHQETINTLKSKISEEVSRNLHMEENTGETK 1005
Cdd:TIGR02169 678 RLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVK 757
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1006 DEFQQKMVGIDKKQdLEAKNTQTLTADVKDNEIIEQQRKIFSLIQEKNELQQMLESVIAEKEQL---KTDLKENIEMTIE 1082
Cdd:TIGR02169 758 SELKELEARIEELE-EDLHKLEEALNDLEARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKlnrLTLEKEYLEKEIQ 836
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1083 NQEELRLLGDELKKqqeivaqeknhAIKKEGELSRTcdRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIEN 1162
Cdd:TIGR02169 837 ELQEQRIDLKEQIK-----------SIEKEIENLNG--KKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELER 903
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1163 LKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKERKVLKELQKSFETERDHLRGYIREIEATG------LQTKEE 1236
Cdd:TIGR02169 904 KIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELSLEDVQAELQRVEEEIRALEpvnmlaIQEYEE 983
|
810 820
....*....|....*....|....*....
gi 767930917 1237 LKIAHIHLKEHQETIDELRRSVSEKTAQI 1265
Cdd:TIGR02169 984 VLKRLDELKEKRAKLEEERKAILERIEEY 1012
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
1040-1818 |
3.05e-12 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 72.70 E-value: 3.05e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1040 EQQRKIFSLIQEKNELQQMLESVIAEKEQLKTDLKENIEMTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTC 1119
Cdd:pfam02463 206 AKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQE 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1120 DRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKIN-----------EIENLKNELKNKELTLEHMETERLELAQKL 1188
Cdd:pfam02463 286 EELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKkaekelkkekeEIEELEKELKELEIKREAEEEEEEELEKLQ 365
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1189 NENYEEVKSITKERKVLKELQKSFETERDHLRGYIREIEATGLQTKEELKIAHIHLKEHQETIDElRRSVSEKTAQIINT 1268
Cdd:pfam02463 366 EKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELE-ILEEEEESIELKQG 444
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1269 QDLEKSHTKLQEEIPVLHEEQELLPNVKEVSETQETMNELELLTEQSTTKD--STTLARIEMERLRLNEKFQESQEEIKS 1346
Cdd:pfam02463 445 KLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLeeRSQKESKARSGLKVLLALIKDGVGGRI 524
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1347 LTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQSLNMKEKDNETTKIVSEMEQFKPKDSALLRIEIEMLGL 1426
Cdd:pfam02463 525 ISAHGRLGDLGVAVENYKVAISTAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILN 604
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1427 SKRLQES------HDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNL 1500
Cdd:pfam02463 605 LAQLDKAtleadeDDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEK 684
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1501 SEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQFNIKQISEVQEKVNELKQFKEHRKAKDSALQSIESKMLELTNRLQE 1580
Cdd:pfam02463 685 AESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEE 764
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1581 SQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKMKESQEKEYQFLKMTAVNETQEKMCEIEhlKEQFETQKLNL 1660
Cdd:pfam02463 765 EKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIK--EEELEELALEL 842
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1661 ENIETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETITRDLKIQEELRIAHMHLKEQQETIDKL 1740
Cdd:pfam02463 843 KEEQKLEKLAEEELERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEER 922
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 767930917 1741 RGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQLKKQIKDQSLTLSKLEIENL 1818
Cdd:pfam02463 923 IKEEAEILLKYEEEPEELLLEEADEKEKEENNKEEEEERNKRLLLAKEELGKVNLMAIEEFEEKEERYNKDELEKERL 1000
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
649-1210 |
3.20e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 72.66 E-value: 3.20e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 649 LELKEKMKELattykqmenDIQLYQSQLEAKKKMQVDLEKELQSAFNEITKLTSLIDgkvpkdllcnlELEGKITDLQKE 728
Cdd:COG1196 216 RELKEELKEL---------EAELLLLKLRELEAELEELEAELEELEAELEELEAELA-----------ELEAELEELRLE 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 729 LNKEVEENEALREEVILLSelkslpSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATT 808
Cdd:COG1196 276 LEELELELEEAQAEEYELL------AELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEA 349
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 809 QSNYKSTDQEFQNFKTLHMDFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNE 888
Cdd:COG1196 350 EEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEA 429
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 889 MEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIHDTVNMNIDTQEQLRN 968
Cdd:COG1196 430 LAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEG 509
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 969 ALESLKqhqetiNTLKSKISEEVSRNLHMEE---------------NTGETKDEFQQKMVGIDKKQDL---------EAK 1024
Cdd:COG1196 510 VKAALL------LAGLRGLAGAVAVLIGVEAayeaaleaalaaalqNIVVEDDEVAAAAIEYLKAAKAgratflpldKIR 583
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1025 NTQTLTADVKDNEIIEQQRKIFSLIQEKNELQQMLESVIAEKEQLKTDLKENIEMTIENQEELRLLGDELKKQQEIVAQE 1104
Cdd:COG1196 584 ARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLT 663
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1105 KNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNKELTLEHMETERLEL 1184
Cdd:COG1196 664 GGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLE 743
|
570 580 590
....*....|....*....|....*....|.
gi 767930917 1185 AQKLN-----ENYEEVKSITKERKVLKELQK 1210
Cdd:COG1196 744 EEELLeeealEELPEPPDLEELERELERLER 774
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
345-1131 |
6.33e-12 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 71.63 E-value: 6.33e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 345 LKRYRKEIMDLKKQLEEVSLETRAQAMEKDQLAQLLEEKDLLQKVQNEKIENLTRMLVTSSSL--TLQQELKAKRKRRvt 422
Cdd:TIGR02168 234 LEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEisRLEQQKQILRERL-- 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 423 wclgkinkmknsNYADQFNIPTNITTKTHKLSINLLREIDESVCSESDVFSNTLDTLSEIEWNPATKLLNQEN----IES 498
Cdd:TIGR02168 312 ------------ANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESrleeLEE 379
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 499 ELNSLRADYDNLVLDYEQLRTEKEEMELKLKE-----KNDLDEFEALERKTKKDQEMQLIHEISNLKNLVKHAEVYNQDL 573
Cdd:TIGR02168 380 QLETLRSKVAQLELQIASLNNEIERLEARLERledrrERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERL 459
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 574 ENELSSKVELLREKEDQIKKLQEYIDSqklenikmdLSYSLESIEDPKQMKQTLFDAETVALDAKRESAFLR---SENLE 650
Cdd:TIGR02168 460 EEALEELREELEEAEQALDAAERELAQ---------LQARLDSLERLQENLEGFSEGVKALLKNQSGLSGILgvlSELIS 530
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 651 LKEKMKELATTYkqMENDIQLYQSQLEAKKKMQVDLEKELQSAFNEITKLTSLIDGKVPKDLLCNLELEGKITDLQKELn 730
Cdd:TIGR02168 531 VDEGYEAAIEAA--LGGRLQAVVVENLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDL- 607
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 731 keVEENEALReevILLSELKSLPSEVERLRKEIQDKSEELH---IITSEKDKLFSEVV---HKESRVQGLLE---EIGKT 801
Cdd:TIGR02168 608 --VKFDPKLR---KALSYLLGGVLVVDDLDNALELAKKLRPgyrIVTLDGDLVRPGGVitgGSAKTNSSILErrrEIEEL 682
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 802 KDDLATTQSNYKSTDQEFQNFKTLHMDFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALktelsykTQELQEKTRE 881
Cdd:TIGR02168 683 EEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQL-------EERIAQLSKE 755
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 882 VQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSdihdtvnmnid 961
Cdd:TIGR02168 756 LTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRE----------- 824
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 962 TQEQLRNALESLKQHQETINTLKSKISEEVSRNLHMEENTGETKDEFQQKMVGIDKKQDL--EAKNTQTLTADVKDNEII 1039
Cdd:TIGR02168 825 RLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASleEALALLRSELEELSEELR 904
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1040 EQQRKIFSLIQEKNELQQMLESVIAEKEQLKTDLKENIEMTienQEELRLLGDELKKQQEivaqeknhaiKKEGELSRTC 1119
Cdd:TIGR02168 905 ELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERL---SEEYSLTLEEAEALEN----------KIEDDEEEAR 971
|
810
....*....|..
gi 767930917 1120 DRLAEVEEKLKE 1131
Cdd:TIGR02168 972 RRLKRLENKIKE 983
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1680-1955 |
9.20e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 71.12 E-value: 9.20e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1680 EMRSVTKERDDLRSVEETLKVERDQLKENLREtitrdlkIQEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLE 1759
Cdd:COG1196 233 KLRELEAELEELEAELEELEAELEELEAELAE-------LEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIA 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1760 NSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQ----LKKQIKDQSLTLSKLEIENLNLAQKLHENLEEMKSVM 1835
Cdd:COG1196 306 RLEERRRELEERLEELEEELAELEEELEELEEELEELEEeleeAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELA 385
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1836 KERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKDLDKSKDEL 1915
Cdd:COG1196 386 EELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELL 465
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 767930917 1916 QKKIQELQKKELQLLRVKEDVNMSHKKINEMEQLKKQFEA 1955
Cdd:COG1196 466 AELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEG 505
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
731-1362 |
1.14e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 70.74 E-value: 1.14e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 731 KEVEEN----EALREEVIllSELKSLPSEVERLRK--EIQDKSEELhiitsEKDKLFSEVVHKESRVQGLLEEIGKTKDD 804
Cdd:COG1196 182 EATEENlerlEDILGELE--RQLEPLERQAEKAERyrELKEELKEL-----EAELLLLKLRELEAELEELEAELEELEAE 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 805 LATTQSNYKSTDQEFQNFKTLHMDFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQE 884
Cdd:COG1196 255 LEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEE 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 885 RLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIHDTVNMNIDTQE 964
Cdd:COG1196 335 LEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLE 414
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 965 QLRNALESLKQHQETINTLKSKISEEVSRNLHMEENTGETKDEFQQKMVGIDKKQDLEAKNTQTLtaDVKDNEIIEQQRK 1044
Cdd:COG1196 415 RLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAAL--AELLEELAEAAAR 492
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1045 IFSLIQEKNELQQMLESVIAEKEQLKTDLKEniemtienQEELRLLGDELKKQQEIV----AQEKNHAIKKEGELSRTCD 1120
Cdd:COG1196 493 LLLLLEAEADYEGFLEGVKAALLLAGLRGLA--------GAVAVLIGVEAAYEAALEaalaAALQNIVVEDDEVAAAAIE 564
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1121 RLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNKELTL-EHMETERLELAQKLNENYEEVKSIT 1199
Cdd:COG1196 565 YLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLgDTLLGRTLVAARLEAALRRAVTLAG 644
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1200 KERKVLKELQKSFE---TERDHLRGYIREIEATGLQTKEELKIAHIHLKEHQETIDELRRSVSEKTAQIINTQDLEKSHT 1276
Cdd:COG1196 645 RLREVTLEGEGGSAggsLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEE 724
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1277 KLQEEIPVLHEEQELLPNVKEVSETQETMNELELLTEQSTTKDSTTLARIEMERL-RLN----EKFQESQEEIKSLTKER 1351
Cdd:COG1196 725 ALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEALgPVNllaiEEYEELEERYDFLSEQR 804
|
650
....*....|.
gi 767930917 1352 DNLKTIKEALE 1362
Cdd:COG1196 805 EDLEEARETLE 815
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1121-1615 |
3.07e-11 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 69.30 E-value: 3.07e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1121 RLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSITK 1200
Cdd:PRK02224 214 ELAELDEEIERYEEQREQARETRDEADEVLEEHEERREELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEE 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1201 ER--------------KVLKELQKSFETERDHLRGYIREIEATGLQTKEELKIAHIHLKEHQETIDELRRSVSEKTAQII 1266
Cdd:PRK02224 294 ERddllaeaglddadaEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELE 373
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1267 NTQ-DLEKSHTK---LQEEIPVLHEEQELLPNVKEVSET-----QETMNEL-ELLTEQSTTKDSTTLARIEMERLRLNEK 1336
Cdd:PRK02224 374 EAReAVEDRREEieeLEEEIEELRERFGDAPVDLGNAEDfleelREERDELrEREAELEATLRTARERVEEAEALLEAGK 453
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1337 ----------------FQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEhIRETLAKIQESQSKQEQSLNMKEKDNETt 1400
Cdd:PRK02224 454 cpecgqpvegsphvetIEEDRERVEELEAELEDLEEEVEEVEERLERAED-LVEAEDRIERLEERREDLEELIAERRET- 531
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1401 kIVSEMEQFKPKDSALLRIEIEMLGLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLkENIKEIVAKHLETEEELk 1480
Cdd:PRK02224 532 -IEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESL-ERIRTLLAAIADAEDEI- 608
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1481 vahcclkeqeETINELRVNLSEKETEistiqkqleaINDKLQNKIQEIYEKEEQFNIKQISEVQEKvnelkqfkehRKAK 1560
Cdd:PRK02224 609 ----------ERLREKREALAELNDE----------RRERLAEKRERKRELEAEFDEARIEEARED----------KERA 658
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*
gi 767930917 1561 DSALQSIESKMLELTNRLQESQEEIQIMIKEKEEMkrvqEALQIERDQLkENTKE 1615
Cdd:PRK02224 659 EEYLEQVEEKLDELREERDDLQAEIGAVENELEEL----EELRERREAL-ENRVE 708
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1266-2004 |
3.70e-11 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 69.40 E-value: 3.70e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1266 INTQDLEKSHTKLQEEIPVLHEEQELLPNVKEVSETQETMNELELLTEQSTTK----DSTTLARIEMERLRlnEKFQESQ 1341
Cdd:PTZ00121 1047 IIDEDIDGNHEGKAEAKAHVGQDEGLKPSYKDFDFDAKEDNRADEATEEAFGKaeeaKKTETGKAEEARKA--EEAKKKA 1124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1342 EEIKSLTKER--DNLKTIKEALEVKHDQLKEHIR--ETLAKIQESQSKQEQSLNMKEKDNETTKIVSEMEQFKP--KDSA 1415
Cdd:PTZ00121 1125 EDARKAEEARkaEDARKAEEARKAEDAKRVEIARkaEDARKAEEARKAEDAKKAEAARKAEEVRKAEELRKAEDarKAEA 1204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1416 LLRIEIEMLGLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIvakhleteEELKVAHCCLKEQEETINE 1495
Cdd:PTZ00121 1205 ARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKF--------EEARMAHFARRQAAIKAEE 1276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1496 LRVNLSEKETEisTIQKQLEAINDKLQNKIQEIYEKEEQFNI-----KQISEVQEKVNELKQFKEHRKAKDSALQSIESK 1570
Cdd:PTZ00121 1277 ARKADELKKAE--EKKKADEAKKAEEKKKADEAKKKAEEAKKadeakKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEA 1354
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1571 MlelTNRLQESQEEIQIMIKEKEEMKRVQEALQIER------DQLKENTKEIVAKMKESQEKEYQFLKMTAVNETQEKMC 1644
Cdd:PTZ00121 1355 A---ADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAeekkkaDEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKK 1431
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1645 EIEHLKEQFETQKLNLE-NIETENIRLTQILHENLEEMRsvtKERDDLRSVEETLKVERDQLKENLRETITRDLKIQEEL 1723
Cdd:PTZ00121 1432 KADEAKKKAEEAKKADEaKKKAEEAKKAEEAKKKAEEAK---KADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEA 1508
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1724 RIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEhqlitlkkdvnetqkKVSEMEQLKKQI 1803
Cdd:PTZ00121 1509 KKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAE---------------EKKKAEEAKKAE 1573
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1804 KDQSLTLSKLEIenlnlAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQLKeslQETKARDLEIQQELKTARMLSKEH 1883
Cdd:PTZ00121 1574 EDKNMALRKAEE-----AKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIK---AEELKKAEEEKKKVEQLKKKEAEE 1645
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1884 KETVDKLREKISEKTIQisdiQKDLDKSKDELQKKIQELQKKELQLLRVKEDVNMSHKKINEMEQLKKQFEAQNLSMQSV 1963
Cdd:PTZ00121 1646 KKKAEELKKAEEENKIK----AAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEEL 1721
|
730 740 750 760
....*....|....*....|....*....|....*....|.
gi 767930917 1964 RmdnfqltKKLHESLEEIRIVAKERDELRRIKESLKMERDQ 2004
Cdd:PTZ00121 1722 K-------KAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEE 1755
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
1334-2209 |
4.54e-11 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 68.84 E-value: 4.54e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1334 NEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQSLNMKEKDNETTKIVSEMEQFKPKD 1413
Cdd:pfam02463 151 KPERRLEIEEEAAGSRLKRKKKEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLD 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1414 sallrieiEMLGLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETI 1493
Cdd:pfam02463 231 --------YLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSEL 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1494 NELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQFNIKQISEVQEKVNELKQFKEHRKAKdSALQSIESKMLE 1573
Cdd:pfam02463 303 LKLERRKVDDEEKLKESEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLE-QLEEELLAKKKL 381
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1574 LTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKMKESQEKEYQFLKMTAVNETQEKmceiEHLKEQF 1653
Cdd:pfam02463 382 ESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEK----EELEKQE 457
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1654 ETQKLNLENIETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETITRDLKIQEELRIAHMHLKEQ 1733
Cdd:pfam02463 458 LKLLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVA 537
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1734 QETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQLKKQIKDQSLTLSKL 1813
Cdd:pfam02463 538 VENYKVAISTAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADE 617
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1814 EIENLNLAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQLKESlqETKARDLEIQQELKTARMLSKEHKETVDKLREK 1893
Cdd:pfam02463 618 DDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKS--EVKASLSELTKELLEIQELQEKAESELAKEEIL 695
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1894 ISEKTIQISDIQKDLDKSKDELQKKIQELQKKELQLLRVKEDVNMSHKKINEMEQLKKQFEAQNLSMQSVRMDNFQLTKK 1973
Cdd:pfam02463 696 RRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKE 775
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1974 LHESLEEIRIVAKERDELRRIKESLKMERdqfiATLREMIARDRQNHQVKPEKRLLSDGQQHLTESLREKCSRIKELLKR 2053
Cdd:pfam02463 776 LAEEREKTEKLKVEEEKEEKLKAQEEELR----ALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKL 851
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2054 YSEMDDHYECLNRLSLDLEKEIEFQKELS-MRVKANLSLPYLQTKHIEKLFTANQRCSMEFHRIMKKLKYVLSYVTKIKE 2132
Cdd:pfam02463 852 AEEELERLEEEITKEELLQELLLKEEELEeQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILL 931
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 767930917 2133 EQHESINKFEMDFIDEVEKQKELLIKIQHLQQDCDVPSRELRDLKLNQNMDLHIEEILKDFSESEFPSIKTEFQQVL 2209
Cdd:pfam02463 932 KYEEEPEELLLEEADEKEKEENNKEEEEERNKRLLLAKEELGKVNLMAIEEFEEKEERYNKDELEKERLEEEKKKLI 1008
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
660-1366 |
4.83e-11 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 68.51 E-value: 4.83e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 660 TTYKQMENDIQLYQSQLEAKKKMQVDLEKELQSAFNEITKLTSLIDG--KVPKDLLCNLELEG-KITDLQKELNKEVEEN 736
Cdd:TIGR04523 33 TEEKQLEKKLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKIleQQIKDLNDKLKKNKdKINKLNSDLSKINSEI 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 737 EALREEVILL-SELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKST 815
Cdd:TIGR04523 113 KNDKEQKNKLeVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKI 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 816 DQEFQNFKTLHMDFEQKykmvLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQ 895
Cdd:TIGR04523 193 KNKLLKLELLLSNLKKK----IQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQ 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 896 LENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDdlkqlqeslQIERDQLKSDIHDTVNMNIDTQEQLRNALESLKQ 975
Cdd:TIGR04523 269 LSEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQKE---------QDWNKELKSELKNQEKKLEEIQNQISQNNKIISQ 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 976 HQETINTLKSKI----SEEVSRNLHMEENTGETKDEFQQKMVGIDKKQDLEaKNTQTLTADVKDNEIIEQQR--KIFSLI 1049
Cdd:TIGR04523 340 LNEQISQLKKELtnseSENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLE-SQINDLESKIQNQEKLNQQKdeQIKKLQ 418
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1050 QEKNELQQMLESVIAEKEQLKTDLK-------------ENIEMTIENQEE-LRLLGDELKKQQEIVAQEKNHAIKKEGEL 1115
Cdd:TIGR04523 419 QEKELLEKEIERLKETIIKNNSEIKdltnqdsvkeliiKNLDNTRESLETqLKVLSRSINKIKQNLEQKQKELKSKEKEL 498
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1116 SRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNkELTLEHMETERLELAQKLNENYEEV 1195
Cdd:TIGR04523 499 KKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDF-ELKKENLEKEIDEKNKEIEELKQTQ 577
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1196 KSITKERKVLKELQKSFETERDHLRGYIREIEATGLQTKEELKIAHIHLKEHQETIDELRRSVSEKTAQIINTQDLEKSH 1275
Cdd:TIGR04523 578 KSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETIKEI 657
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1276 TKLQEEIpvLHEEQELLPNVKEVSETQETMNELELLTEQSTTKDSTTlariEMERLRLNEKFQESQEEIKSLTKERDNLK 1355
Cdd:TIGR04523 658 RNKWPEI--IKKIKESKTKIDDIIELMKDWLKELSLHYKKYITRMIR----IKDLPKLEEKYKEIEKELKKLDEFSKELE 731
|
730
....*....|.
gi 767930917 1356 TIKEALEVKHD 1366
Cdd:TIGR04523 732 NIIKNFNKKFD 742
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
582-1375 |
5.75e-11 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 68.56 E-value: 5.75e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 582 ELLREKED---QIKKLQEYIDSqkLENIKMDLSYSLESIEDPKQMKQTLFDAETVALDAKRESaflrsENLELKEKMKEL 658
Cdd:TIGR02169 227 ELLKEKEAlerQKEAIERQLAS--LEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEE-----EQLRVKEKIGEL 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 659 attykqmENDIQLYQSQLEAKKKMQVDLEKELQSAFNEITKLTSLIDgkvpkdllcnlELEGKITDLQKELNKEVEENEA 738
Cdd:TIGR02169 300 -------EAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIE-----------ELEREIEEERKRRDKLTEEYAE 361
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 739 LREEV-ILLSELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQ 817
Cdd:TIGR02169 362 LKEELeDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEE 441
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 818 EFQNFKTLHMDFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLE 897
Cdd:TIGR02169 442 EKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQ 521
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 898 NRDST---LQTVEREKTLITE-----KLQQTLEEVKTLTQEKDDL---------------KQLQESLQIERDQLKSDIHD 954
Cdd:TIGR02169 522 GVHGTvaqLGSVGERYATAIEvaagnRLNNVVVEDDAVAKEAIELlkrrkagratflplnKMRDERRDLSILSEDGVIGF 601
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 955 TVNMnIDTQEQLRNALESLKQHQETINTLKSkiSEEVSRNLHMEENTGETKDEfQQKMVGIDKKQDLEAKNTQTLTAdvk 1034
Cdd:TIGR02169 602 AVDL-VEFDPKYEPAFKYVFGDTLVVEDIEA--ARRLMGKYRMVTLEGELFEK-SGAMTGGSRAPRGGILFSRSEPA--- 674
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1035 dnEIIEQQRKIFSLIQEKNELQQMLESVIAEKEQLKTDLKENIEMTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGE 1114
Cdd:TIGR02169 675 --ELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQE 752
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1115 LSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEE--MSEMQKKINEIENLKNELKNKELTLEHMETERLELAQKLNENY 1192
Cdd:TIGR02169 753 IENVKSELKELEARIEELEEDLHKLEEALNDLEARlsHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLE 832
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1193 EEVKSITKERKVLKELQKSFETERDHLRGYIREIEATGLQTK---EELKIAHIHLK----EHQETIDELRRSVSEKTAQI 1265
Cdd:TIGR02169 833 KEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEaalRDLESRLGDLKkerdELEAQLRELERKIEELEAQI 912
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1266 intQDLEKSHTKLQEEIPVLHEE-QELLPNVKEVSETQETMNELELLTE--QSTTKDSTTLARIEMerlRLNEKFQESQE 1342
Cdd:TIGR02169 913 ---EKKRKRLSELKAKLEALEEElSEIEDPKGEDEEIPEEELSLEDVQAelQRVEEEIRALEPVNM---LAIQEYEEVLK 986
|
810 820 830
....*....|....*....|....*....|...
gi 767930917 1343 EIKSLTKERDNLKTIKEALEVKHDQLKEHIRET 1375
Cdd:TIGR02169 987 RLDELKEKRAKLEEERKAILERIEEYEKKKREV 1019
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
828-1412 |
6.10e-11 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 68.17 E-value: 6.10e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 828 DFEQKYKMVLEENERMNQEIVNLskeaQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVE 907
Cdd:PRK03918 159 DYENAYKNLGEVIKEIKRRIERL----EKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELE 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 908 REKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSdihdtvnmnidtQEQLRNALESLKQHQETINTLKSKI 987
Cdd:PRK03918 235 ELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEE------------LEEKVKELKELKEKAEEYIKLSEFY 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 988 SEEVSRNLHMEENTGETKDEFQQKMVGIDKKQDLEAKNTQTLtadvkdnEIIEQQRKIFSLIQEKNELQQMLESVIAEKE 1067
Cdd:PRK03918 303 EEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLEELK-------KKLKELEKRLEELEERHELYEEAKAKKEELE 375
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1068 QLKTDLK-ENIEMTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEK--LKEKSQQLQEKQQQLL 1144
Cdd:PRK03918 376 RLKKRLTgLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKcpVCGRELTEEHRKELLE 455
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1145 NVQEEMSEMQKKINEIENLKNELKNKELTLEhMETERLELAQKLNENYEEVKSITKERKV--LKELQKSFEtERDHLRGY 1222
Cdd:PRK03918 456 EYTAELKRIEKELKEIEEKERKLRKELRELE-KVLKKESELIKLKELAEQLKELEEKLKKynLEELEKKAE-EYEKLKEK 533
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1223 IREIEATGLQTKEELKIAHiHLKEHQETIDELRRSVSEKTAQIINT------QDLEKSHTKLQEEIPVLHEEQELLPNVK 1296
Cdd:PRK03918 534 LIKLKGEIKSLKKELEKLE-ELKKKLAELEKKLDELEEELAELLKEleelgfESVEELEERLKELEPFYNEYLELKDAEK 612
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1297 EVSETQETMNELELLTEQSTTKDSTTLARIEMERLRLNEKFQE-SQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRET 1375
Cdd:PRK03918 613 ELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKySEEEYEELREEYLELSRELAGLRAELEELEKRREEI 692
|
570 580 590
....*....|....*....|....*....|....*..
gi 767930917 1376 LAKIQESQSKQEQSLNMKEKDNETTKIVSEMEQFKPK 1412
Cdd:PRK03918 693 KKTLEKLKEELEEREKAKKELEKLEKALERVEELREK 729
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1474-2076 |
6.11e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 68.42 E-value: 6.11e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1474 ETEEELKVAhcclkeqEEtiNELRVN--LSEKETEISTIQKQLE------AINDKLQNKIQEIYEKEEQFNIKQISEVQE 1545
Cdd:COG1196 176 EAERKLEAT-------EE--NLERLEdiLGELERQLEPLERQAEkaeryrELKEELKELEAELLLLKLRELEAELEELEA 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1546 KVNELKqfkEHRKAKDSALQSIESKMLELTNRLQESQEEIQIMIKE----KEEMKRVQEALQIERDQLKENTKEIVAKMK 1621
Cdd:COG1196 247 ELEELE---AELEELEAELAELEAELEELRLELEELELELEEAQAEeyelLAELARLEQDIARLEERRRELEERLEELEE 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1622 ESQEKEYQFLKMTAVNETQEKmcEIEHLKEQFETQKLNLENIETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVE 1701
Cdd:COG1196 324 ELAELEEELEELEEELEELEE--ELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQ 401
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1702 RDQLKENLRETITRDLKIQEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLIT 1781
Cdd:COG1196 402 LEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAE 481
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1782 LKKDVNETQKKVSEMEQLKKQ--IKDQSLTLSKLEIENLNLAQKLHENLE----------------EMKSVMKERDNLRR 1843
Cdd:COG1196 482 LLEELAEAAARLLLLLEAEADyeGFLEGVKAALLLAGLRGLAGAVAVLIGveaayeaaleaalaaaLQNIVVEDDEVAAA 561
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1844 VEETLKLERDQLKESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKDLDKSKDELQKK--IQE 1921
Cdd:COG1196 562 AIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALrrAVT 641
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1922 LQKKELQLLRVKEDVNMSHKKINEMEQLKKQFEAQNLSMQSVRMDNFQLTKKLHESLEEIRIVAKERDELRRIKESLKME 2001
Cdd:COG1196 642 LAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEEL 721
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2002 RDQFIATLREMIARDRQNHQVKPEKRLLSDGQQHLT-----ESLREKCSRIKELLKR-----------YSEMDDHYECLN 2065
Cdd:COG1196 722 EEEALEEQLEAEREELLEELLEEEELLEEEALEELPeppdlEELERELERLEREIEAlgpvnllaieeYEELEERYDFLS 801
|
650
....*....|.
gi 767930917 2066 RLSLDLEKEIE 2076
Cdd:COG1196 802 EQREDLEEARE 812
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1121-1852 |
7.06e-11 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 68.63 E-value: 7.06e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1121 RLAEVEEKLKEKSQQLQEKQQQLLNVQEEM---SEMQKKINEIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKS 1197
Cdd:PTZ00121 1206 RKAEEERKAEEARKAEDAKKAEAVKKAEEAkkdAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKK 1285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1198 ITKERKVlKELQKSFETER-DHLRGYIREI-EATGLQTK-EELKIAHIHLK---EHQETIDELRRSVSEKTAQiintqDL 1271
Cdd:PTZ00121 1286 AEEKKKA-DEAKKAEEKKKaDEAKKKAEEAkKADEAKKKaEEAKKKADAAKkkaEEAKKAAEAAKAEAEAAAD-----EA 1359
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1272 EKSHTKLQEEIPVLHEEQELLPNVKEVSETQETMNELELLTEQSTTKdSTTLARIEMERLRLNEkFQESQEEIKSLTKER 1351
Cdd:PTZ00121 1360 EAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKK-ADELKKAAAAKKKADE-AKKKAEEKKKADEAK 1437
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1352 DNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQSLNMKEKDNETTKIVSEMEQFKPKDSALLRIEIEMLGLSKRLQ 1431
Cdd:PTZ00121 1438 KKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKK 1517
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1432 ESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEivAKHLETEEELKVAHCCLKEQEETINELRVNLSEKETEISTIQ 1511
Cdd:PTZ00121 1518 AEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKK--AEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIE 1595
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1512 KQLEAINDKLQNKIQEIYEKEEQF----NIKQISEVQEKVNELKQFKEHRKAKDSALQSIES----KMLELTNRLQESQE 1583
Cdd:PTZ00121 1596 EVMKLYEEEKKMKAEEAKKAEEAKikaeELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEenkiKAAEEAKKAEEDKK 1675
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1584 EIQIMIKEKEEmKRVQEALQIERDQLKENTKEIVAKMKESQEKEYQFLKmtavnETQEKMCEIEHLKEQFETQKLNLENI 1663
Cdd:PTZ00121 1676 KAEEAKKAEED-EKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKK-----AEEENKIKAEEAKKEAEEDKKKAEEA 1749
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1664 ETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETITRDLK-----IQEELRIAHMHLKEQQETID 1738
Cdd:PTZ00121 1750 KKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDIFdnfanIIEGGKEGNLVINDSKEMED 1829
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1739 KLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQLKKQIKDQsltlSKLEIENL 1818
Cdd:PTZ00121 1830 SAIKEVADSKNMQLEEADAFEKHKFNKNNENGEDGNKEADFNKEKDLKEDDEEEIEEADEIEKIDKDD----IEREIPNN 1905
|
730 740 750
....*....|....*....|....*....|....*.
gi 767930917 1819 NLAQKLHENLEEM--KSVMKERDNLRRVEETLKLER 1852
Cdd:PTZ00121 1906 NMAGKNNDIIDDKldKDEYIKRDAEETREEIIKISK 1941
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1441-1931 |
9.79e-11 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 67.76 E-value: 9.79e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1441 AKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVnlseketeistiqkqLEAINDK 1520
Cdd:PRK02224 198 EKEEKDLHERLNGLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERREELET---------------LEAEIED 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1521 LQNKIQEIYEKEEQFNiKQISEVQEKVNELKQFKEHRKAK----DSALQSIESKMLELTNRLQESQEEIQIMIKEKEEMK 1596
Cdd:PRK02224 263 LRETIAETEREREELA-EEVRDLRERLEELEEERDDLLAEagldDADAEAVEARREELEDRDEELRDRLEECRVAAQAHN 341
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1597 RVQEALQIERDQLKENTKEIVAKMKESqEKEYQflkmTAVNETQEKMCEIEHLKEQFETQKLNLENIETENIRLTQiLHE 1676
Cdd:PRK02224 342 EEAESLREDADDLEERAEELREEAAEL-ESELE----EAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAED-FLE 415
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1677 NLEEMRSVTKERddLRSVEETLKVERDQLKENLR--------------------ETITRDLKIQEELRIAHMHLKEQQET 1736
Cdd:PRK02224 416 ELREERDELRER--EAELEATLRTARERVEEAEAlleagkcpecgqpvegsphvETIEEDRERVEELEAELEDLEEEVEE 493
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1737 ----IDKLRGIVsEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDVNE-----------TQKKVSEMEQLKK 1801
Cdd:PRK02224 494 veerLERAEDLV-EAEDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAEleaeaeekreaAAEAEEEAEEARE 572
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1802 QIK--DQSLTLSKLEIENLNlaqKLHENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKTARM- 1878
Cdd:PRK02224 573 EVAelNSKLAELKERIESLE---RIRTLLAAIADAEDEIERLREKREALAELNDERRERLAEKRERKRELEAEFDEARIe 649
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*
gi 767930917 1879 LSKEHKETVDKLREKISEKTiqisdiqKDLDKSKDELQKKIQ--ELQKKELQLLR 1931
Cdd:PRK02224 650 EAREDKERAEEYLEQVEEKL-------DELREERDDLQAEIGavENELEELEELR 697
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
1253-1998 |
9.79e-11 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 67.69 E-value: 9.79e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1253 ELRRSVSEKTAQIINTQDLEKSHTKLQEEIPVLHEEQELLPNVKEVSETQETMNELELLTEQSTTKdsttlarIEMERLR 1332
Cdd:pfam02463 177 KLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLL-------QELLRDE 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1333 LNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQlKEHIRETLAKIQESQSKQEQSLNMKEKDNEttKIVSEMEQFKPK 1412
Cdd:pfam02463 250 QEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQ-EEELKLLAKEEEELKSELLKLERRKVDDEE--KLKESEKEKKKA 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1413 DSALLRIEIEMLGLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEET 1492
Cdd:pfam02463 327 EKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKE 406
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1493 INELRVNLSEKETEISTIQKQLEAINDKLQnKIQEIYEKEEQFNIKQISEVQEKVNELKQFKEHRKAKDSALQSIESKML 1572
Cdd:pfam02463 407 AQLLLELARQLEDLLKEEKKEELEILEEEE-ESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQ 485
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1573 ELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKMKESQEKEYQFLKMTAVNETQEKMCEIEHLKEQ 1652
Cdd:pfam02463 486 LELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIVEVSATADEVEERQK 565
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1653 FetQKLNLENIETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETITRDLKIQEELRIAHMHLKE 1732
Cdd:pfam02463 566 L--VRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKESAKA 643
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1733 QQETIDKLRGIVSEKTDKLSNMQKDLENsnAKLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQLKKQIKDQSLTLSK 1812
Cdd:pfam02463 644 KESGLRKGVSLEEGLAEKSEVKASLSEL--TKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEE 721
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1813 LEIENLNLAQ---KLHENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKTARmLSKEHKETVDK 1889
Cdd:pfam02463 722 LLADRVQEAQdkiNEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVE-EEKEEKLKAQE 800
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1890 LREKISEKTIQISDIQKDLDKSKDELQKKIQELQKKELQLL---RVKEDVNMSHKKINEMEQLKKQFEAQNLSMQSVRMD 1966
Cdd:pfam02463 801 EELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALElkeEQKLEKLAEEELERLEEEITKEELLQELLLKEEELE 880
|
730 740 750
....*....|....*....|....*....|..
gi 767930917 1967 NFQLTKKLHESLEEIRIVAKERDELRRIKESL 1998
Cdd:pfam02463 881 EQKLKDELESKEEKEKEEKKELEEESQKLNLL 912
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1112-1707 |
1.07e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 67.65 E-value: 1.07e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1112 EGELSRTCDRLAEVE----------EKLK---------------------------------EKSQQLQEKQQQLLNVQE 1148
Cdd:COG1196 178 ERKLEATEENLERLEdilgelerqlEPLErqaekaeryrelkeelkeleaellllklreleaELEELEAELEELEAELEE 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1149 EMSEMQKKINEIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKERKVLKELQKSFETERDHLRGYIREIEA 1228
Cdd:COG1196 258 LEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEE 337
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1229 TGLQTKEELKIAHIHLKEHQETIDELRRSVSEKTAQIINTQDLEKSHTKLQEEIpvLHEEQELLPNVKEVSETQETMNEL 1308
Cdd:COG1196 338 ELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEA--LRAAAELAAQLEELEEAEEALLER 415
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1309 ELLTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQ 1388
Cdd:COG1196 416 LERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLL 495
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1389 SLNMKEKDNETTKIVSEMEQfKPKDSALLRIEIEMLG------------LSKRLQESHDEMKSVAKEKDDL---QRLQEV 1453
Cdd:COG1196 496 LLEAEADYEGFLEGVKAALL-LAGLRGLAGAVAVLIGveaayeaaleaaLAAALQNIVVEDDEVAAAAIEYlkaAKAGRA 574
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1454 LQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEE 1533
Cdd:COG1196 575 TFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGE 654
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1534 QFNIKQISEVQEKVNELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEiqimiKEKEEMKRVQEALQIERDQLKENT 1613
Cdd:COG1196 655 GGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEE-----ERELAEAEEERLEEELEEEALEEQ 729
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1614 KEIVAKMKESQEKEYQFLKMTAVNETQEKMCEIEHLKEQFETQKLNLENIETENIRLtqilhenLEEMRSVTKERDDLRS 1693
Cdd:COG1196 730 LEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEALGPVNLLA-------IEEYEELEERYDFLSE 802
|
650
....*....|....
gi 767930917 1694 VEETLKVERDQLKE 1707
Cdd:COG1196 803 QREDLEEARETLEE 816
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
650-1832 |
1.75e-10 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 67.38 E-value: 1.75e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 650 ELKEKMKELATTYKQMENDIQLYQSQLEAKKKMQVDLEKELQSAFNEITKltsLIDGKVPKDLLcNLELEGKITDLQK-- 727
Cdd:TIGR01612 541 EIEAGLKESYELAKNWKKLIHEIKKELEEENEDSIHLEKEIKDLFDKYLE---IDDEIIYINKL-KLELKEKIKNISDkn 616
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 728 -------ELNKEVEENEALREEVILLSELKsLPSEVERLRKEIQD-KSEELHIITSEKDKLFSEVvhkESRVQGLLEEIG 799
Cdd:TIGR01612 617 eyikkaiDLKKIIENNNAYIDELAKISPYQ-VPEHLKNKDKIYSTiKSELSKIYEDDIDALYNEL---SSIVKENAIDNT 692
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 800 KTKDDLATTQSNYKSTDQEFQNFKT----LHM-DFEQKYKMVLEENERMNQEIVN-LSKEAQKFDSSLGALKTELSYKTQ 873
Cdd:TIGR01612 693 EDKAKLDDLKSKIDKEYDKIQNMETatveLHLsNIENKKNELLDIIVEIKKHIHGeINKDLNKILEDFKNKEKELSNKIN 772
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 874 ELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKtliTEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIH 953
Cdd:TIGR01612 773 DYAKEKDELNKYKSKISEIKNHYNDQINIDNIKDEDA---KQNYDKSKEYIKTISIKEDEIFKIINEMKFMKDDFLNKVD 849
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 954 DTVNMNIDTQEQLRNALESLKqhqETINTLKSKISEEVSRNlhMEENTGETKDEFQQKMVGIDKkqdlEAKNTQTLTadv 1033
Cdd:TIGR01612 850 KFINFENNCKEKIDSEHEQFA---ELTNKIKAEISDDKLND--YEKKFNDSKSLINEINKSIEE----EYQNINTLK--- 917
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1034 KDNEIIEQQRKIFSLIQEKNELQQMLESVIaeKEQLKTDLKEN-IEMTIENQEELRLLGDELKKQQEIVAQEKNHAIKKE 1112
Cdd:TIGR01612 918 KVDEYIKICENTKESIEKFHNKQNILKEIL--NKNIDTIKESNlIEKSYKDKFDNTLIDKINELDKAFKDASLNDYEAKN 995
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1113 GELSRTCDRLAEVEEKLKEKSQQLQ--EKQQQLLNVQEEMSEMQKKINEIE--------NLKNELKNK-ELTLEHMETER 1181
Cdd:TIGR01612 996 NELIKYFNDLKANLGKNKENMLYHQfdEKEKATNDIEQKIEDANKNIPNIEiaihtsiyNIIDEIEKEiGKNIELLNKEI 1075
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1182 LELAQKLNENYEEVKSITKE---RKVLKELQKSFETERDHLRGYIREIEATGLQTKEEL----KIAHIHLKEHQETIDEL 1254
Cdd:TIGR01612 1076 LEEAEINITNFNEIKEKLKHynfDDFGKEENIKYADEINKIKDDIKNLDQKIDHHIKALeeikKKSENYIDEIKAQINDL 1155
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1255 RRsVSEKTAQIINTQDLEKSH----TKLQEEIPVLHEEQELLPNVKEVSETQETMNELELLT-EQSTTKDSTTLARIEME 1329
Cdd:TIGR01612 1156 ED-VADKAISNDDPEEIEKKIenivTKIDKKKNIYDEIKKLLNEIAEIEKDKTSLEEVKGINlSYGKNLGKLFLEKIDEE 1234
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1330 R------LRLNEKFQESQEEIKSLTKERDNLKTIK-------EALEVKHDQLKEH-------------IRETLAKIQESQ 1383
Cdd:TIGR01612 1235 KkksehmIKAMEAYIEDLDEIKEKSPEIENEMGIEmdikaemETFNISHDDDKDHhiiskkhdenisdIREKSLKIIEDF 1314
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1384 SKQEQSLNMKEKDN----ETTKIVSEMEQFKPKDSALLRIeiemLGLSKrLQESHDEMKSVAKEKDDLQRLQEVLQSESD 1459
Cdd:TIGR01612 1315 SEESDINDIKKELQknllDAQKHNSDINLYLNEIANIYNI----LKLNK-IKKIIDEVKEYTKEIEENNKNIKDELDKSE 1389
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1460 QLKENIKE-IVAKHLETEEELKVAHCCLKEQEETINELRVNLSEKETEISTIQKQLEAINDKL----------QNKIQEI 1528
Cdd:TIGR01612 1390 KLIKKIKDdINLEECKSKIESTLDDKDIDECIKKIKELKNHILSEESNIDTYFKNADENNENVlllfkniemaDNKSQHI 1469
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1529 YEKEEQ-------FNIKQISEVQEKVNELKQ---------------FKEHRKAKDSALQSIESkmLELTNRLQESQEEIQ 1586
Cdd:TIGR01612 1470 LKIKKDnatndhdFNINELKEHIDKSKGCKDeadknakaieknkelFEQYKKDVTELLNKYSA--LAIKNKFAKTKKDSE 1547
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1587 IMIKEKEEMKRV----------------QEALQIERDQLKEN--TKEIVAKMKESQEKEYQFLKMTAV-NETQEKMCEIE 1647
Cdd:TIGR01612 1548 IIIKEIKDAHKKfileaekseqkikeikKEKFRIEDDAAKNDksNKAAIDIQLSLENFENKFLKISDIkKKINDCLKETE 1627
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1648 HLKEQFETQKLNLENIE-TENIRLTQILHENLEEMRSVTK-------ERDDLRSVEETLKVERDQLKENLRETITRdlKI 1719
Cdd:TIGR01612 1628 SIEKKISSFSIDSQDTElKENGDNLNSLQEFLESLKDQKKniedkkkELDELDSEIEKIEIDVDQHKKNYEIGIIE--KI 1705
|
1210 1220 1230 1240 1250 1260 1270 1280
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1720 QEELRIAHMHLKEQQETIDKL--RGIVSEKTDKLSNMqkdleNSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSEME 1797
Cdd:TIGR01612 1706 KEIAIANKEEIESIKELIEPTieNLISSFNTNDLEGI-----DPNEKLEEYNTEIGDIYEEFIELYNIIAGCLETVSKEP 1780
|
1290 1300 1310
....*....|....*....|....*....|....*
gi 767930917 1798 QLKKQIKDQSLTLSKLEIENLNLAQKLHENLEEMK 1832
Cdd:TIGR01612 1781 ITYDEIKNTRINAQNEFLKIIEIEKKSKSYLDDIE 1815
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
726-1659 |
2.04e-10 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 66.99 E-value: 2.04e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 726 QKELNKEVEENEALREEVILLSELKSLPSEVERLRKEIQDKSEELHIITSEKdKLFSEVVHKESRVQgllEEIGKTKDDL 805
Cdd:TIGR00606 158 QEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVQEHQMEL-KYLKQYKEKACEIR---DQITSKEAQL 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 806 ATTQSNYKSTDQEFQNFKTLhmdfeqkykmvLEENERMNQEIVNLSKEAQKFDSSlgalKTELSYKTQELQEKTREVQER 885
Cdd:TIGR00606 234 ESSREIVKSYENELDPLKNR-----------LKEIEHNLSKIMKLDNEIKALKSR----KKQMEKDNSELELKMEKVFQG 298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 886 LNEmeQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDL--KQLQESLQIERDQLKSDIHDTVNMNIDTQ 963
Cdd:TIGR00606 299 TDE--QLNDLYHNHQRTVREKERELVDCQRELEKLNKERRLLNQEKTELlvEQGRLQLQADRHQEHIRARDSLIQSLATR 376
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 964 EQLRNALESLKQHQETINTLKSKISEEVSRNLHMEENTGETKDEFQQKMVGIDKKQDLEAKNTQTLtadvkDNEIIEQQR 1043
Cdd:TIGR00606 377 LELDGFERGPFSERQIKNFHTLVIERQEDEAKTAAQLCADLQSKERLKQEQADEIRDEKKGLGRTI-----ELKKEILEK 451
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1044 KIFSLIQEKNELQQMLESV--IAEKEQLKTDLKENIEMTIENQEELRLLGDE--LKKQQEIVAQEKNHAIKKEGELSRTC 1119
Cdd:TIGR00606 452 KQEELKFVIKELQQLEGSSdrILELDQELRKAERELSKAEKNSLTETLKKEVksLQNEKADLDRKLRKLDQEMEQLNHHT 531
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1120 DRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSIT 1199
Cdd:TIGR00606 532 TTRTQMEMLTKDKMDKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHIN 611
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1200 KERKVLKELQKSFETerdhlrgyiREIEATGLQTkEELKIAhiHLKEHQETIDELRRSVSEKTAqiINTQDLEKSHTKLQ 1279
Cdd:TIGR00606 612 NELESKEEQLSSYED---------KLFDVCGSQD-EESDLE--RLKEEIEKSSKQRAMLAGATA--VYSQFITQLTDENQ 677
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1280 EEIPVLHEEQELLPNVKEVSETQETM--------NELELLTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKER 1351
Cdd:TIGR00606 678 SCCPVCQRVFQTEAELQEFISDLQSKlrlapdklKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVN 757
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1352 DNLKTIKEALEVKHDQLKE-HIRETLAKIQESQSKQEQSLNMKEKDNEtTKIVSEMEQFKPKDSALLRIEiemlgLSKRL 1430
Cdd:TIGR00606 758 RDIQRLKNDIEEQETLLGTiMPEEESAKVCLTDVTIMERFQMELKDVE-RKIAQQAAKLQGSDLDRTVQQ-----VNQEK 831
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1431 QESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNLSEKETEISTI 1510
Cdd:TIGR00606 832 QEKQHELDTVVSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQD 911
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1511 QKQLEAINDKLQNKIQEIYEKEEQFNIKQIsEVQEKVNELKQFKEHRK--------AKDSALQSIESKMLELTNRLQESQ 1582
Cdd:TIGR00606 912 SPLETFLEKDQQEKEELISSKETSNKKAQD-KVNDIKEKVKNIHGYMKdienkiqdGKDDYLKQKETELNTVNAQLEECE 990
|
890 900 910 920 930 940 950
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 767930917 1583 EEIQIMIKEKEEMKRVQEALQIERDQLKEN--TKEIVAKMKESQEKEYQFLKMTAVNETQEKMCEIEHLKEQFETQKLN 1659
Cdd:TIGR00606 991 KHQEKINEDMRLMRQDIDTQKIQERWLQDNltLRKRENELKEVEEELKQHLKEMGQMQVLQMKQEHQKLEENIDLIKRN 1069
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1486-2055 |
4.31e-10 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 65.47 E-value: 4.31e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1486 LKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEqfNIKQISEVQEKVNELKQFKEHRKAKDSALQ 1565
Cdd:PRK03918 167 LGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISS--ELPELREELEKLEKEVKELEELKEEIEELE 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1566 SIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEalqierdqlkentkEIVAKMKESQEKEyqflkmtavnetqEKMCE 1645
Cdd:PRK03918 245 KELESLEGSKRKLEEKIRELEERIEELKKEIEELE--------------EKVKELKELKEKA-------------EEYIK 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1646 IEHLKEQFETQKLNLENIETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLR--ETITRDLKIQEEL 1723
Cdd:PRK03918 298 LSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHElyEEAKAKKEELERL 377
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1724 RIAHM-----HLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKA-------------NEHQLITLKKD 1785
Cdd:PRK03918 378 KKRLTgltpeKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKakgkcpvcgreltEEHRKELLEEY 457
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1786 VNETQKKVSEMEQLKKQIKDQSLTLSKLEIENLNLAQ--KLHENLEEMKSVMKERD--NLRRVEETLKlERDQLKESLQE 1861
Cdd:PRK03918 458 TAELKRIEKELKEIEEKERKLRKELRELEKVLKKESEliKLKELAEQLKELEEKLKkyNLEELEKKAE-EYEKLKEKLIK 536
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1862 TKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKDLDKSKDELQKKIQELQKKELQLLRVKEDVNMSHK 1941
Cdd:PRK03918 537 LKGEIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEELGFESVEELEERLKELEPFYNEYLELKDAEKELER 616
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1942 KINEMEQLKKQFEAQNLSMQSVRMDNFQLTKKLHE-----SLEEIRIVAKERDELRRI-------KESLKMERDQFIATL 2009
Cdd:PRK03918 617 EEKELKKLEEELDKAFEELAETEKRLEELRKELEElekkySEEEYEELREEYLELSRElaglraeLEELEKRREEIKKTL 696
|
570 580 590 600
....*....|....*....|....*....|....*....|....*.
gi 767930917 2010 REMIARDRQNHQVKPEKRLLSDGQQHLTEsLREKCSRIKELLKRYS 2055
Cdd:PRK03918 697 EKLKEELEEREKAKKELEKLEKALERVEE-LREKVKKYKALLKERA 741
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1497-2211 |
4.60e-10 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 65.93 E-value: 4.60e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1497 RVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQFNIKQISEVQE---KVNELKQFKEHRKAKDS-----ALQSIE 1568
Cdd:PTZ00121 1071 GLKPSYKDFDFDAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEakkKAEDARKAEEARKAEDArkaeeARKAED 1150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1569 SKMLELTNRLQESQEeIQIMiKEKEEMKRVQEALQIERDQLKENTKEIVAKMKESQEKEYQFLKMTAVNETQEKMCEIEH 1648
Cdd:PTZ00121 1151 AKRVEIARKAEDARK-AEEA-RKAEDAKKAEAARKAEEVRKAEELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEA 1228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1649 LKEQFETQKLNLENIETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETitRDLKIQEELRIAHM 1728
Cdd:PTZ00121 1229 VKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKA--DEAKKAEEKKKADE 1306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1729 HLK--EQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKAnehqlitlKKDVNETQKKVSEMEQLKKQIKDQ 1806
Cdd:PTZ00121 1307 AKKkaEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEA--------AADEAEAAEEKAEAAEKKKEEAKK 1378
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1807 SLTLSKLEIENLNLAQKLHENLEEMKsvmKERDNLRRVEETLKLERDQLKESLQETKARDLEIQ-QELKTARMLSK--EH 1883
Cdd:PTZ00121 1379 KADAAKKKAEEKKKADEAKKKAEEDK---KKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKaEEAKKADEAKKkaEE 1455
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1884 KETVDKLREKISEKTIQISDIQKDLDKSKDELQKKIQELQKKELQLLRVKEDVNMSHKKINEMEQLKKQFEAQNlSMQSV 1963
Cdd:PTZ00121 1456 AKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKK-AEEAK 1534
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1964 RMDNFQLTKKLHESlEEIRIV--AKERDELRRIKESLKMERDQFIATLREMIARDRQNHQVKPEKRLLSDGQQHLTESLR 2041
Cdd:PTZ00121 1535 KADEAKKAEEKKKA-DELKKAeeLKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAK 1613
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2042 ---------EKCSRIKELLKRYSEMDDHYECLNRLSLDLEKEIEFQK------------------------ELSMRVKAN 2088
Cdd:PTZ00121 1614 kaeeakikaEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKikaaeeakkaeedkkkaeeakkaeEDEKKAAEA 1693
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2089 LSLPYLQTKHIEKLFTANQRCSMEFHRIMKKLKYVLSYVTKIKEEQHESINKFEMDFIDEVEKQKellikIQHLQQDCDV 2168
Cdd:PTZ00121 1694 LKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKK-----IAHLKKEEEK 1768
|
730 740 750 760
....*....|....*....|....*....|....*....|...
gi 767930917 2169 PSRELRDLKlnqnmDLHIEEILKDFSESEFPSIKTEFQQVLSN 2211
Cdd:PTZ00121 1769 KAEEIRKEK-----EAVIEEELDEEDEKRRMEVDKKIKDIFDN 1806
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
1149-1954 |
5.66e-10 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 65.45 E-value: 5.66e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1149 EMSEMQKKINEIENLKNELKnkelTLEHMETERLELAQKLNENYEEVKSITKERKVLKELQKSFETERDHLRGYIREIEA 1228
Cdd:TIGR00606 167 EGKALKQKFDEIFSATRYIK----ALETLRQVRQTQGQKVQEHQMELKYLKQYKEKACEIRDQITSKEAQLESSREIVKS 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1229 TGLQTKEelkiahihLKEHQETIDELRRSVSEKTAQIINTQDLEKSHTKLQEEIPVLHEeqellpnvKEVSETQETMNEL 1308
Cdd:TIGR00606 243 YENELDP--------LKNRLKEIEHNLSKIMKLDNEIKALKSRKKQMEKDNSELELKME--------KVFQGTDEQLNDL 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1309 ELLTEQSTTKDSTTLARIEMERLRLNEKFQEsqeeiksLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQE- 1387
Cdd:TIGR00606 307 YHNHQRTVREKERELVDCQRELEKLNKERRL-------LNQEKTELLVEQGRLQLQADRHQEHIRARDSLIQSLATRLEl 379
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1388 -----QSLNMKEKDNETTKIVSEMEQFKPKDSALLRIEIEMLGLSKR-LQESHDEMKSVAKEkddLQRLQEVLQSESDQL 1461
Cdd:TIGR00606 380 dgferGPFSERQIKNFHTLVIERQEDEAKTAAQLCADLQSKERLKQEqADEIRDEKKGLGRT---IELKKEILEKKQEEL 456
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1462 KENIKEIVAKHLETEEELKvahcclKEQEETINELRVNLSEKETEISTIQKQLEAINDK---LQNKIQEIYEKEEQFNIK 1538
Cdd:TIGR00606 457 KFVIKELQQLEGSSDRILE------LDQELRKAERELSKAEKNSLTETLKKEVKSLQNEkadLDRKLRKLDQEMEQLNHH 530
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1539 QISEVQEKV---NELKQFKEHRKAKDSALQSIESKMLELTNRLQESqEEIQIMIKEKEEMKRVQEALQIERDQLKENTKE 1615
Cdd:TIGR00606 531 TTTRTQMEMltkDKMDKDEQIRKIKSRHSDELTSLLGYFPNKKQLE-DWLHSKSKEINQTRDRLAKLNKELASLEQNKNH 609
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1616 IVAKMKESQEKEYQFL-KMTAVNETQEKMCEIEHLKEQFETQKLNLENIETENIRLTQILHENLEEMRSVTKERDDLRSV 1694
Cdd:TIGR00606 610 INNELESKEEQLSSYEdKLFDVCGSQDEESDLERLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQT 689
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1695 EETLKVERDQLKENLRETITRDLKIQEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKA 1774
Cdd:TIGR00606 690 EAELQEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEE 769
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1775 NEHQLITL---KKDVNETQKKVSEMEQLKKQIKD---------QSLTLSKLEIENLNLAQKLHENLEEMKSVMKERDNLR 1842
Cdd:TIGR00606 770 QETLLGTImpeEESAKVCLTDVTIMERFQMELKDverkiaqqaAKLQGSDLDRTVQQVNQEKQEKQHELDTVVSKIELNR 849
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1843 RVEETLKLERDQLKESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKDLDKSKDELQKKIQEL 1922
Cdd:TIGR00606 850 KLIQDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQDSPLETFLEKDQQEKEELI 929
|
810 820 830
....*....|....*....|....*....|..
gi 767930917 1923 QKKELQLLRVKEDVNMSHKKINEMEQLKKQFE 1954
Cdd:TIGR00606 930 SSKETSNKKAQDKVNDIKEKVKNIHGYMKDIE 961
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1430-2102 |
7.34e-10 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 65.09 E-value: 7.34e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1430 LQESHDEMKSVAKEKDDLQRLQEvLQSESDQLKenIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNLSEKETEIST 1509
Cdd:TIGR02169 193 IDEKRQQLERLRREREKAERYQA-LLKEKREYE--GYELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEE 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1510 IQKQLEAINDKLQNKIQEiyekeeqfnikQISEVQEKVNELKqfKEHRKAKDSaLQSIESKMLELTNRLQESQEEIQIMI 1589
Cdd:TIGR02169 270 IEQLLEELNKKIKDLGEE-----------EQLRVKEKIGELE--AEIASLERS-IAEKERELEDAEERLAKLEAEIDKLL 335
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1590 KEKEEMKRVQEALQIERDQLKENTKEIVAKMKES----QEKEYQFlkMTAVNETQEKMCEIEHLKEQFETQKLNLENIET 1665
Cdd:TIGR02169 336 AEIEELEREIEEERKRRDKLTEEYAELKEELEDLraelEEVDKEF--AETRDELKDYREKLEKLKREINELKRELDRLQE 413
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1666 ENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETI-------TRDLKIQEELRIAHMHLKEQQETID 1738
Cdd:TIGR02169 414 ELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAadlskyeQELYDLKEEYDRVEKELSKLQRELA 493
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1739 KL---RGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLIT---------LKKDVNETQKKVSEMEQLKKQ---- 1802
Cdd:TIGR02169 494 EAeaqARASEERVRGGRAVEEVLKASIQGVHGTVAQLGSVGERYATaievaagnrLNNVVVEDDAVAKEAIELLKRrkag 573
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1803 ---------IKDQSLTLSKLE-------------------------------IENLNLAQKLH----------------- 1825
Cdd:TIGR02169 574 ratflplnkMRDERRDLSILSedgvigfavdlvefdpkyepafkyvfgdtlvVEDIEAARRLMgkyrmvtlegelfeksg 653
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1826 -----------------ENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKTARMLSKEHKETVD 1888
Cdd:TIGR02169 654 amtggsraprggilfsrSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEE 733
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1889 KLREKISEKTIQISDIQKDLDKSKDELQKKIQELQKKELQLLRVKEDVNMSHKKINE--MEQLKKQFEAQNLSMQSVRMD 1966
Cdd:TIGR02169 734 KLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHsrIPEIQAELSKLEEEVSRIEAR 813
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1967 NFQLTKKLHESLEEIRIVAKERDELRRIKESLKMERDQFIATLREMIARDRQNHQVKPEKRLlsdgqqhlteSLREKCSR 2046
Cdd:TIGR02169 814 LREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEA----------ALRDLESR 883
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*.
gi 767930917 2047 IKELLKRYSEMDDHYECLNRLSLDLEKEIEFQKELSMRVKANLSLPYLQTKHIEKL 2102
Cdd:TIGR02169 884 LGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDP 939
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1151-1898 |
1.05e-09 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 64.27 E-value: 1.05e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1151 SEMQKKINEIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKERKVLKELQKSFETERDHLRGYIREIeatg 1230
Cdd:TIGR04523 33 TEEKQLEKKLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDLSKI---- 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1231 lqtKEELKIAHIHLKEHQETIDELRRSVSEKTAQIIntqDLEKSHTKLQEEIPVLHEEQELLPNVKEVSETQETMNELEL 1310
Cdd:TIGR04523 109 ---NSEIKNDKEQKNKLEVELNKLEKQKKENKKNID---KFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEK 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1311 LTEQSTTKDsttlarIEMERLRLNEKF---QESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQE 1387
Cdd:TIGR04523 183 LNIQKNIDK------IKNKLLKLELLLsnlKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLN 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1388 QSLNMKEKDNEttkivsemeQFKPKDSALLRIEIEMLGLSKRLQESHDEMKSVAKEKDdlQRLQEVLQSESDQLKENIKE 1467
Cdd:TIGR04523 257 QLKDEQNKIKK---------QLSEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQKE--QDWNKELKSELKNQEKKLEE 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1468 IVAKHLETEEELKVAHCCLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQFNIKQiSEVQEKV 1547
Cdd:TIGR04523 326 IQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLE-SKIQNQE 404
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1548 NELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKMKESQEKE 1627
Cdd:TIGR04523 405 KLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNL 484
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1628 YQFLKMTAVNETQEKMCEIEHLKEQFETQKLNlENIETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKverdqlKE 1707
Cdd:TIGR04523 485 EQKQKELKSKEKELKKLNEEKKELEEKVKDLT-KKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFELK------KE 557
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1708 NLRETITRDLKIQEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDVN 1787
Cdd:TIGR04523 558 NLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSIIKNIK 637
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1788 ETQKKVSE-MEQLKKQIKDQSLTLSKLEIENLNLAQKLHENLEEMKSVMKErDNLRRVEETLKLERDQLKESLQEtkaRD 1866
Cdd:TIGR04523 638 SKKNKLKQeVKQIKETIKEIRNKWPEIIKKIKESKTKIDDIIELMKDWLKE-LSLHYKKYITRMIRIKDLPKLEE---KY 713
|
730 740 750
....*....|....*....|....*....|..
gi 767930917 1867 LEIQQELKTARMLSKEHKETVDKLREKISEKT 1898
Cdd:TIGR04523 714 KEIEKELKKLDEFSKELENIIKNFNKKFDDAF 745
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
963-1628 |
1.08e-09 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 64.22 E-value: 1.08e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 963 QEQLRNALESLKQHQETINTLKSKISEEVSRNLHMEENTGETKDEFQQKMVGIDKKQDLEAKNTQTLTADVKDNEIIEQQ 1042
Cdd:TIGR00618 166 KELLMNLFPLDQYTQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYL 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1043 RKIFSLIQEKNELQQMLESVIAEKEQLKTDLKEniemtIENQEELRllgdELKKQQEIVAQEKNHAIKKEGELSRTCDRL 1122
Cdd:TIGR00618 246 TQKREAQEEQLKKQQLLKQLRARIEELRAQEAV-----LEETQERI----NRARKAAPLAAHIKAVTQIEQQAQRIHTEL 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1123 AEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQK-----KINEIENLKNELKNKELTLEHMETERL-ELAQKLNENYEEVK 1196
Cdd:TIGR00618 317 QSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTlhsqeIHIRDAHEVATSIREISCQQHTLTQHIhTLQQQKTTLTQKLQ 396
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1197 SITKERKVLKELQKSFETE---RDHLRGYIREIEATGLQTKEELKIAHIHL-KEHQETI------DELRRSVSEKTAQII 1266
Cdd:TIGR00618 397 SLCKELDILQREQATIDTRtsaFRDLQGQLAHAKKQQELQQRYAELCAAAItCTAQCEKlekihlQESAQSLKEREQQLQ 476
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1267 NTQDLEKSHTK----------LQEEIPVLHEEQELLPNVKEV-----------------------SETQETMNELELLTE 1313
Cdd:TIGR00618 477 TKEQIHLQETRkkavvlarllELQEEPCPLCGSCIHPNPARQdidnpgpltrrmqrgeqtyaqleTSEEDVYHQLTSERK 556
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1314 QsTTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQSLNMK 1393
Cdd:TIGR00618 557 Q-RASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHALLRKLQPEQDLQDVRLHLQ 635
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1394 EKDNETTKIVSEMEQF-------KPKDSALLRIEIEMLGLSKR---LQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKE 1463
Cdd:TIGR00618 636 QCSQELALKLTALHALqltltqeRVREHALSIRVLPKELLASRqlaLQKMQSEKEQLTYWKEMLAQCQTLLRELETHIEE 715
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1464 NIKEIVakhlETEEELKVAHCCLKEQEETINELRVNLSE------KETEISTIQKQLEAINDKLQNKIQEIYEKEEQFNI 1537
Cdd:TIGR00618 716 YDREFN----EIENASSSLGSDLAAREDALNQSLKELMHqartvlKARTEAHFNNNEEVTAALQTGAELSHLAAEIQFFN 791
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1538 KQISEVQEKVNELKQfkEHRKAKDSALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIV 1617
Cdd:TIGR00618 792 RLREEDTHLLKTLEA--EIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLGEITHQLLKYEECSKQLAQLTQEQA 869
|
730
....*....|.
gi 767930917 1618 AKMKESQEKEY 1628
Cdd:TIGR00618 870 KIIQLSDKLNG 880
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
840-2004 |
1.38e-09 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 64.30 E-value: 1.38e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 840 NERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREktlITEKLQQ 919
Cdd:TIGR01612 535 KAKLYKEIEAGLKESYELAKNWKKLIHEIKKELEEENEDSIHLEKEIKDLFDKYLEIDDEIIYINKLKLE---LKEKIKN 611
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 920 tLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIHDTVNMNIDTQEQLRNALES--LKQHQETINTLKSKISEEVSRNLHM 997
Cdd:TIGR01612 612 -ISDKNEYIKKAIDLKKIIENNNAYIDELAKISPYQVPEHLKNKDKIYSTIKSelSKIYEDDIDALYNELSSIVKENAID 690
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 998 EENTGETKDEFQQKMVGI-DKKQDLEAKNTQTLTADVKDNE------IIEQQRKIFSLIQekNELQQMLESVIAEKEQLK 1070
Cdd:TIGR01612 691 NTEDKAKLDDLKSKIDKEyDKIQNMETATVELHLSNIENKKnelldiIVEIKKHIHGEIN--KDLNKILEDFKNKEKELS 768
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1071 TDLKENIEMTienqeelrllgDELKKQQEIVAQEKNHaikkegelsrTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEM 1150
Cdd:TIGR01612 769 NKINDYAKEK-----------DELNKYKSKISEIKNH----------YNDQINIDNIKDEDAKQNYDKSKEYIKTISIKE 827
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1151 SEMQKKINEIENLKNELKNKELTLEHMETERLElaqKLNENYEEVKSITKERKvlkelqksfeterdhlrgyiREIeatg 1230
Cdd:TIGR01612 828 DEIFKIINEMKFMKDDFLNKVDKFINFENNCKE---KIDSEHEQFAELTNKIK--------------------AEI---- 880
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1231 lqTKEELKIAHIHLKEHQETIDELRRSVsEKTAQIINTQDLEKSHTKL----QEEIPVLHEEQELL-----PNVKEVSET 1301
Cdd:TIGR01612 881 --SDDKLNDYEKKFNDSKSLINEINKSI-EEEYQNINTLKKVDEYIKIcentKESIEKFHNKQNILkeilnKNIDTIKES 957
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1302 QETMNELELLTEQSTTKDSTTLARIEMErLRLNEKFQESQEEIKSLTKERDNLKTIKEalEVKHDQLKEHIRETLAKIQE 1381
Cdd:TIGR01612 958 NLIEKSYKDKFDNTLIDKINELDKAFKD-ASLNDYEAKNNELIKYFNDLKANLGKNKE--NMLYHQFDEKEKATNDIEQK 1034
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1382 SQSKQEQSLNMKEKDNETT-KIVSEMEQFKPKDSALLRIEIemLGLSKRLQESHDEMKSVAKEK--DDLQRLQEV-LQSE 1457
Cdd:TIGR01612 1035 IEDANKNIPNIEIAIHTSIyNIIDEIEKEIGKNIELLNKEI--LEEAEINITNFNEIKEKLKHYnfDDFGKEENIkYADE 1112
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1458 SDQLKENIKEI---VAKHLETEEELKvahcclKEQEETINELRVNLS--EKETEISTIQKQLEAINDKLQNKIQEIYEKE 1532
Cdd:TIGR01612 1113 INKIKDDIKNLdqkIDHHIKALEEIK------KKSENYIDEIKAQINdlEDVADKAISNDDPEEIEKKIENIVTKIDKKK 1186
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1533 EQFN-----IKQISEVQ------EKVNE-------------LKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQIM 1588
Cdd:TIGR01612 1187 NIYDeikklLNEIAEIEkdktslEEVKGinlsygknlgklfLEKIDEEKKKSEHMIKAMEAYIEDLDEIKEKSPEIENEM 1266
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1589 IKEKEeMKRVQEALQIERDQLKENTKEIVAKMKESQEKEYQFLKMTAVNETQEKMCEIEhlkeqfETQKLNLENIETENI 1668
Cdd:TIGR01612 1267 GIEMD-IKAEMETFNISHDDDKDHHIISKKHDENISDIREKSLKIIEDFSEESDINDIK------KELQKNLLDAQKHNS 1339
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1669 RLTQILHE-----NLEEMRSVTKERDDLRS----VEETLKVERDQL--KENLRETITRDLKIQE-----ELRIAHMHLKE 1732
Cdd:TIGR01612 1340 DINLYLNEianiyNILKLNKIKKIIDEVKEytkeIEENNKNIKDELdkSEKLIKKIKDDINLEEckskiESTLDDKDIDE 1419
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1733 QQETIDKLRG-IVSEKTDKLSNMQKDLE-NSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQLKKQiKDQSLTL 1810
Cdd:TIGR01612 1420 CIKKIKELKNhILSEESNIDTYFKNADEnNENVLLLFKNIEMADNKSQHILKIKKDNATNDHDFNINELKEH-IDKSKGC 1498
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1811 SKLEIENLNLAQKLHENLEEMKSVMKERDNlrrveetlKLERDQLKESLQETKARDLEIQQELKTARMLSKEHKETVDKL 1890
Cdd:TIGR01612 1499 KDEADKNAKAIEKNKELFEQYKKDVTELLN--------KYSALAIKNKFAKTKKDSEIIIKEIKDAHKKFILEAEKSEQK 1570
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1891 REKISEKTIQISDIQKDLDKSKDELQKKIQELQKKELQLLRVKEDVNMSHKKINEMEQLKKQFEAQNLSMQSVRM----D 1966
Cdd:TIGR01612 1571 IKEIKKEKFRIEDDAAKNDKSNKAAIDIQLSLENFENKFLKISDIKKKINDCLKETESIEKKISSFSIDSQDTELkengD 1650
|
1210 1220 1230 1240
....*....|....*....|....*....|....*....|..
gi 767930917 1967 NFQLTKKLHESLEE----IRIVAKERDELRRIKESLKMERDQ 2004
Cdd:TIGR01612 1651 NLNSLQEFLESLKDqkknIEDKKKELDELDSEIEKIEIDVDQ 1692
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1718-1926 |
1.94e-09 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 62.09 E-value: 1.94e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1718 KIQEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSEME 1797
Cdd:COG4942 31 QLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELAELL 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1798 QLKKQIKDQSLTLSKLEIENLNLAQKLHENLEEMKSVMKER-DNLRRVEETLKLERDQLKESLQETKARDLEIQQELKTA 1876
Cdd:COG4942 111 RALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQaEELRADLAELAALRAELEAERAELEALLAELEEERAAL 190
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 767930917 1877 RMLSKEHKETVDKLREKISEKTIQISDIQKDldksKDELQKKIQELQKKE 1926
Cdd:COG4942 191 EALKAERQKLLARLEKELAELAAELAELQQE----AEELEALIARLEAEA 236
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1424-1627 |
2.51e-09 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 62.09 E-value: 2.51e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1424 LGLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNLSEK 1503
Cdd:COG4942 9 LLLALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAEL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1504 ETEISTIQKQLEAINDKLQNKIQEIYEKEEQ------FNIKQISEVQEKVNELKQFKEHRKAKDSALQSIESKMLELTNR 1577
Cdd:COG4942 89 EKEIAELRAELEAQKEELAELLRALYRLGRQpplallLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAE 168
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 767930917 1578 LQESQEEIQIMIKEKEEMKRVQEALQIERDQ-LKENTKEIVAKMKESQEKE 1627
Cdd:COG4942 169 LEAERAELEALLAELEEERAALEALKAERQKlLARLEKELAELAAELAELQ 219
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
515-1213 |
3.10e-09 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 62.83 E-value: 3.10e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 515 EQLRTEKEEMELKLKEKNDLDEFEALERKTK------KDQEMQLihEISNLKNLVKHAEVYNQDLENELSSKVELLRE-- 586
Cdd:pfam15921 81 EEYSHQVKDLQRRLNESNELHEKQKFYLRQSvidlqtKLQEMQM--ERDAMADIRRRESQSQEDLRNQLQNTVHELEAak 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 587 --KEDQIKKLQEYIDSQKleniKMDLSYslESIEdpKQMKQTLFDAETVALDAKRE-----SAFLRSENLELKEKMKELA 659
Cdd:pfam15921 159 clKEDMLEDSNTQIEQLR----KMMLSH--EGVL--QEIRSILVDFEEASGKKIYEhdsmsTMHFRSLGSAISKILRELD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 660 TTYKQMENDIQLYQSQLEA-KKKMQVDLEKELQSAFNEITKLTSLIDGKVPKDLLCNLELEGKITDLQKELnkEVEENEA 738
Cdd:pfam15921 231 TEISYLKGRIFPVEDQLEAlKSESQNKIELLLQQHQDRIEQLISEHEVEITGLTEKASSARSQANSIQSQL--EIIQEQA 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 739 LREEVILLSELKSLPSEVERLRKEI-------QDKSEELHI-----------ITSEKDKLFSEVVHKESRVQGLLEEIGK 800
Cdd:pfam15921 309 RNQNSMYMRQLSDLESTVSQLRSELreakrmyEDKIEELEKqlvlanselteARTERDQFSQESGNLDDQLQKLLADLHK 388
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 801 TKDDLA-TTQSNYKSTDQEFQNFKTLhmdfeqkykmvleenERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKT 879
Cdd:pfam15921 389 REKELSlEKEQNKRLWDRDTGNSITI---------------DHLRRELDDRNMEVQRLEALLKAMKSECQGQMERQMAAI 453
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 880 REVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSdihdTVNMN 959
Cdd:pfam15921 454 QGKNESLEKVSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKERAIEATNAEITKLRS----RVDLK 529
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 960 IDTQEQLRNALESLKQHQETINTLKSKISE----------EVSRNLHMEENTGETKDEFQQKMVGIDKK---QDLEAKNT 1026
Cdd:pfam15921 530 LQELQHLKNEGDHLRNVQTECEALKLQMAEkdkvieilrqQIENMTQLVGQHGRTAGAMQVEKAQLEKEindRRLELQEF 609
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1027 QTLTaDVKDNEIIEQQRKIFSLIQEK-------NELQQMLESVIAEKEQLKTDLKENIEMTIENQEELRLLGDELKKQQE 1099
Cdd:pfam15921 610 KILK-DKKDAKIRELEARVSDLELEKvklvnagSERLRAVKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSE 688
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1100 IVAQEKNhaiKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKIN----EIENLKNELKNKELTLE 1175
Cdd:pfam15921 689 EMETTTN---KLKMQLKSAQSELEQTRNTLKSMEGSDGHAMKVAMGMQKQITAKRGQIDalqsKIQFLEEAMTNANKEKH 765
|
730 740 750
....*....|....*....|....*....|....*...
gi 767930917 1176 HMETERLELAQKLNENYEEVKSITKERKVLKELQKSFE 1213
Cdd:pfam15921 766 FLKEEKNKLSQELSTVATEKNKMAGELEVLRSQERRLK 803
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1724-2082 |
4.32e-09 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 62.39 E-value: 4.32e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1724 RIAHMHLKEQQETIDKLRGIvsektdklsnmqKDLENSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSEmEQLKKqI 1803
Cdd:TIGR02169 146 DFISMSPVERRKIIDEIAGV------------AEFDRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRR-EREKA-E 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1804 KDQSLTLSKLEIENLNLAQKLHENLEEMKSVMKERDNLRRveetlklERDQLKESLQETKARDLEIQQELKT-ARMLSKE 1882
Cdd:TIGR02169 212 RYQALLKEKREYEGYELLKEKEALERQKEAIERQLASLEE-------ELEKLTEEISELEKRLEEIEQLLEElNKKIKDL 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1883 HKETVDKLREKISEKTIQISDIQKDLDKSKDELQKKIQELQKKELQLLRVKEDVNMSHKKINEMEQLKKQFEAQNLSMQS 1962
Cdd:TIGR02169 285 GEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKE 364
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1963 VRMDNFQ----LTKKLHESLEEIRIVAKERDELRRIKESLKMERDQFIATLREMIARDRQNHQ----VKPEKRLLSDGQQ 2034
Cdd:TIGR02169 365 ELEDLRAeleeVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAaiagIEAKINELEEEKE 444
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 767930917 2035 HLTESLREKCSRIKELLKRYSEMDDHYECLNRLSLDLEKEI-EFQKELS 2082
Cdd:TIGR02169 445 DKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELsKLQRELA 493
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
873-1387 |
6.41e-09 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 61.59 E-value: 6.41e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 873 QELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDI 952
Cdd:PRK02224 237 DEADEVLEEHEERREELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARR 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 953 HDTVNMNIDTQEQLRNALESLKQHQETINTLKSKISEEVSRNLHMEENTGETKDEFQQKMVGIDKKQDleakntqtlTAD 1032
Cdd:PRK02224 317 EELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRRE---------EIE 387
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1033 VKDNEIIEQQRKIFSLIQEKNELQQMLESVIAEKEQLKTDLKEnIEMTIENQEElrllgdELKKQQEIVAQEKNHAIKKE 1112
Cdd:PRK02224 388 ELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAE-LEATLRTARE------RVEEAEALLEAGKCPECGQP 460
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1113 GELSRTCDRLAEVEEKLKEksqqlqeKQQQLLNVQEEMSEMQKKINEIEnlknELKNKELTLEHMEtERLELAQKLNENY 1192
Cdd:PRK02224 461 VEGSPHVETIEEDRERVEE-------LEAELEDLEEEVEEVEERLERAE----DLVEAEDRIERLE-ERREDLEELIAER 528
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1193 EEvkSITKERKVLKELQKSFEterdhlrgyirEIEATGLQTKEELKIAHIHLKEHQETIDELRRSVSEKTAQIINTQDLE 1272
Cdd:PRK02224 529 RE--TIEEKRERAEELRERAA-----------ELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESLERIR 595
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1273 KSHTKLQEEIPVLHEEQELLPNVKEVS-ETQETMNEL-ELLTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKE 1350
Cdd:PRK02224 596 TLLAAIADAEDEIERLREKREALAELNdERRERLAEKrERKRELEAEFDEARIEEAREDKERAEEYLEQVEEKLDELREE 675
|
490 500 510
....*....|....*....|....*....|....*..
gi 767930917 1351 RDNLKTIKEALEVKHDQLKEhIRETLAKIQESQSKQE 1387
Cdd:PRK02224 676 RDDLQAEIGAVENELEELEE-LRERREALENRVEALE 711
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1454-1982 |
9.28e-09 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 61.19 E-value: 9.28e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1454 LQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEE 1533
Cdd:TIGR04523 122 LEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLEL 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1534 QFNI--KQISEVQEKVNELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKrvqealqierDQLKE 1611
Cdd:TIGR04523 202 LLSNlkKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIK----------KQLSE 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1612 NTKEIVAKMKESQEKEYQFLKMTAVNETQEKMCE---IEHLKEQFETQKLNLENIETENIRLTQILHENLEEMRSVTKER 1688
Cdd:TIGR04523 272 KQKELEQNNKKIKELEKQLNQLKSEISDLNNQKEqdwNKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKEL 351
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1689 DDLRSVEETLKVERDQlKENLRETItrdlkiqeelriahmhLKEQQETIDKLRGIVSEKTDKLSNMQKDlENSNAKLQEK 1768
Cdd:TIGR04523 352 TNSESENSEKQRELEE-KQNEIEKL----------------KKENQSYKQEIKNLESQINDLESKIQNQ-EKLNQQKDEQ 413
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1769 IQELKANEHQLitlkkdVNETQKKVSEMEQLKKQIKDQSLTLSKLEIENLNLAQKLHENLEEMKSVMKERDNLRRVEETL 1848
Cdd:TIGR04523 414 IKKLQQEKELL------EKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQK 487
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1849 KLERDQLKESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKDLDKSKDELQKKIQELQKKELQ 1928
Cdd:TIGR04523 488 QKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFELKKENLEKEIDEKN 567
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*.
gi 767930917 1929 --LLRVKEDVNMSHKKINEMEQLKKQFEAQNLSMQSVRMDNFQLTKKLHESLEEIR 1982
Cdd:TIGR04523 568 keIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAK 623
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1730-1928 |
1.09e-08 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 59.84 E-value: 1.09e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1730 LKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSE-MEQLKKQIKD--- 1805
Cdd:COG3883 18 IQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEErREELGERARAlyr 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1806 QSLTLSKLEIenLNLAQKLHENLEEMKSVMKERDNLRRVEETLKlerdQLKESLQETKARDLEIQQELKTARMLSKEHKE 1885
Cdd:COG3883 98 SGGSVSYLDV--LLGSESFSDFLDRLSALSKIADADADLLEELK----ADKAELEAKKAELEAKLAELEALKAELEAAKA 171
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 767930917 1886 TVDKLREKISEKTIQISDIQKDLDKSKDELQKKIQELQKKELQ 1928
Cdd:COG3883 172 ELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAA 214
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
546-895 |
1.56e-08 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 60.47 E-value: 1.56e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 546 KDQEMQLIHEISNLKNLVKHAEVYNQDLENELSskvelLREKEDQIKKLQEYIDSQKLENIKMDLSYSLESIEDPKQMKQ 625
Cdd:TIGR02169 687 KRELSSLQSELRRIENRLDELSQELSDASRKIG-----EIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELK 761
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 626 TLfDAETVALDAKRESAFLRSENLELKEKMKELATTYKQMEnDIQLYQSQLEAKKKmqvDLEKELQSAFNEITKLTSLID 705
Cdd:TIGR02169 762 EL-EARIEELEEDLHKLEEALNDLEARLSHSRIPEIQAELS-KLEEEVSRIEARLR---EIEQKLNRLTLEKEYLEKEIQ 836
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 706 GKVPKdllcNLELEGKITDLQKE---LNKEVEENEALREEviLLSELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFS 782
Cdd:TIGR02169 837 ELQEQ----RIDLKEQIKSIEKEienLNGKKEELEEELEE--LEAALRDLESRLGDLKKERDELEAQLRELERKIEELEA 910
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 783 EVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEFQNfktlHMDFEQKYKMVLEENERMNQ-EIVNLsKEAQKFDSSL 861
Cdd:TIGR02169 911 QIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEE----ELSLEDVQAELQRVEEEIRAlEPVNM-LAIQEYEEVL 985
|
330 340 350
....*....|....*....|....*....|....
gi 767930917 862 GALKtELSYKTQELQEKTREVQERLNEMEQLKEQ 895
Cdd:TIGR02169 986 KRLD-ELKEKRAKLEEERKAILERIEEYEKKKRE 1018
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
1675-2521 |
1.67e-08 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 60.37 E-value: 1.67e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1675 HENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETITRDLKIQEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNM 1754
Cdd:pfam02463 155 RLEIEEEAAGSRLKRKKKEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKL 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1755 --------QKDLENSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQLKKQIKDQSLTLSKLEIENLNLAQKLHE 1826
Cdd:pfam02463 235 neeridllQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEE 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1827 NLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKtIQISDIQK 1906
Cdd:pfam02463 315 KLKESEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESER-LSSAAKLK 393
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1907 DLDKSKDELQKKIQELQKkelQLLRVKEDVNMSHKKINEMEQLKKQFEAQNLSMQSVRMDNFQLTKKLHESLEEIRIVAK 1986
Cdd:pfam02463 394 EEELELKSEEEKEAQLLL---ELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKS 470
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1987 ERDELRRIKESLKMERDQFIATLREMIARDRQNHQVKPEKRLLSDGQQHLTESLREKCSRIKELLKRYSEMDDHYECLNR 2066
Cdd:pfam02463 471 EDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVI 550
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2067 LSLDLEKEIEFQKELSMRVKANLSLPYLQTKHIEKLFTANQRCSMEFH-----RIMKKLKYVLSYVTKIKEEQHESINKF 2141
Cdd:pfam02463 551 VEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEidpilNLAQLDKATLEADEDDKRAKVVEGILK 630
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2142 EMDFIDEVEKQKELLIKIQHLQQDCDVPSRELRDLKLNQNMDLHIEEILKDFSESEFPSIKTEFQQVLSNRKEMTQ-FLE 2220
Cdd:pfam02463 631 DTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQrEKE 710
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2221 EWLNTRFDIEKLKNGIQKENDRICQVNNFFNNRIIAIMNESTEFEERSATISKEWEQDLKSLKEKNEKLFKNYQTLKTSL 2300
Cdd:pfam02463 711 ELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEE 790
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2301 ASGAQVNPTTQDNKNPHVTSRATQLTTEKIRELENSLHEAKESAMHKESKIIKMQKELEvtndiiAKLQAKVHESNKCLE 2380
Cdd:pfam02463 791 EKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLE------KLAEEELERLEEEIT 864
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2381 KTKETIQVLQDKVALGAKPYKEEIEDLKMKLVKIDLEKMKNAKEFEKEISATKATVEYQKEVIRLLRENL---RRSQQAQ 2457
Cdd:pfam02463 865 KEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEeepEELLLEE 944
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 767930917 2458 DTSVISEHTDPQPSNKPLTCGGGSGIVQNTKALILKSEHIRLEKEISKLKQQNEQLIKQKNELL 2521
Cdd:pfam02463 945 ADEKEKEENNKEEEEERNKRLLLAKEELGKVNLMAIEEFEEKEERYNKDELEKERLEEEKKKLI 1008
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
695-1204 |
1.94e-08 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 60.05 E-value: 1.94e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 695 NEITKLTSLIDGKVPKDLLCNL-ELEGKITDLQKELnKEVEEN-----EALREEVILLSELKSLPSEVERLRKEIQDKSE 768
Cdd:PRK02224 187 GSLDQLKAQIEEKEEKDLHERLnGLESELAELDEEI-ERYEEQreqarETRDEADEVLEEHEERREELETLEAEIEDLRE 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 769 ELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEFQNFKTLH-------MDFEQKYKMVLEENE 841
Cdd:PRK02224 266 TIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDeelrdrlEECRVAAQAHNEEAE 345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 842 RMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTL 921
Cdd:PRK02224 346 SLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELR 425
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 922 EEVKTLTQekdDLKQLQESLQIERDQLK-------------SDIHDTVNMNIDTQEQLRNALESLKQHQET----INTLK 984
Cdd:PRK02224 426 EREAELEA---TLRTARERVEEAEALLEagkcpecgqpvegSPHVETIEEDRERVEELEAELEDLEEEVEEveerLERAE 502
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 985 S--KISEEVSRNLHMEENTGE-------TKDEFQQKMVGIDK-KQDLEAK-NTQTLTADVKDNEIIEQQRKIFSLIQEKN 1053
Cdd:PRK02224 503 DlvEAEDRIERLEERREDLEEliaerreTIEEKRERAEELRErAAELEAEaEEKREAAAEAEEEAEEAREEVAELNSKLA 582
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1054 ELQQMLESV--IAEKEQLKTDLKENIEMTIENQEELRLLGDE----LKKQQEIVAQ-----EKNHAIKKEGELSRTCDRL 1122
Cdd:PRK02224 583 ELKERIESLerIRTLLAAIADAEDEIERLREKREALAELNDErrerLAEKRERKREleaefDEARIEEAREDKERAEEYL 662
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1123 AEVEEKLKEKsqqlqekQQQLLNVQEEMSEMQKKINEIENLKNELKNKELTLEHMETERLElAQKLNENYEEVKSITKER 1202
Cdd:PRK02224 663 EQVEEKLDEL-------REERDDLQAEIGAVENELEELEELRERREALENRVEALEALYDE-AEELESMYGDLRAELRQR 734
|
..
gi 767930917 1203 KV 1204
Cdd:PRK02224 735 NV 736
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
559-1190 |
2.17e-08 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 60.03 E-value: 2.17e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 559 LKNLVKHAEVYNQDLENELSSKVELLREKEDQIKKLQEY------------------------------IDSQKLENIKM 608
Cdd:TIGR04523 24 YKNIANKQDTEEKQLEKKLKTIKNELKNKEKELKNLDKNlnkdeekinnsnnkikileqqikdlndklkKNKDKINKLNS 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 609 DLSYSLESIEDPKQMKQTLfdaetvaldaKRESAFLRSENLELKEKMKELATTYKQMENDIQLYQSQLEAKKKMQVDLEK 688
Cdd:TIGR04523 104 DLSKINSEIKNDKEQKNKL----------EVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELEN 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 689 ELQSAFNEITKLTSLIDGKVPKDLLCNLELEGKITDLQKELNKEVEENEALREEVILLSELKSLPSEVERLRKEIQDKSE 768
Cdd:TIGR04523 174 ELNLLEKEKLNIQKNIDKIKNKLLKLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQT 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 769 ELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEFQN--FKTLHMDFEQKYKMVLEEN------ 840
Cdd:TIGR04523 254 QLNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQKEQdwNKELKSELKNQEKKLEEIQnqisqn 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 841 ----ERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEK 916
Cdd:TIGR04523 334 nkiiSQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQ 413
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 917 LQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIHD---TVNMNIDTQEQLRNALESLKQHQETINTLKSKISEEVSR 993
Cdd:TIGR04523 414 IKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVkelIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKS 493
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 994 NLHMEENTGETKDEFQQKMVGIDKKQDLEAKNTQTLTADV--KDNEIIEQQRKIFSLIQEKNELQqmLESVIAEKEQLKT 1071
Cdd:TIGR04523 494 KEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKkeKESKISDLEDELNKDDFELKKEN--LEKEIDEKNKEIE 571
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1072 DLKENIEMTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRtcdRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMS 1151
Cdd:TIGR04523 572 ELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEK---ELEKAKKENEKLSSIIKNIKSKKNKLKQEVK 648
|
650 660 670
....*....|....*....|....*....|....*....
gi 767930917 1152 EMQKKINEIENLKNELKNKELTLEHMETERLELAQKLNE 1190
Cdd:TIGR04523 649 QIKETIKEIRNKWPEIIKKIKESKTKIDDIIELMKDWLK 687
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
519-1421 |
2.89e-08 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 59.77 E-value: 2.89e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 519 TEKEEMELKLKEKNDLDEFEALERKTKKDQEMQLIHEISNLKNLVKHAEV--YNQDLENELSSKVELLREKED--QIKKL 594
Cdd:PTZ00121 1090 DEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAEDArkAEEARKAEDAKRVEIARKAEDarKAEEA 1169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 595 QEYIDSQKLEN----IKMDLSYSLESIEDPKQMKQTL-FDAETVALDAKRESAFLRSENLELKEKMKELATTYKQMEndi 669
Cdd:PTZ00121 1170 RKAEDAKKAEAarkaEEVRKAEELRKAEDARKAEAARkAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAE--- 1246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 670 qlyqsqlEAKKKMQVDLEKELQSAFNEITKLTSLIDGKVPKDLLCNLELEGKITDLQK-ELNKEVEENEALREEVILLSE 748
Cdd:PTZ00121 1247 -------EERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKaEEKKKADEAKKKAEEAKKADE 1319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 749 LKSLPSEVERLRKEIQDKSEElhiitsekDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEFQNFKTLHMD 828
Cdd:PTZ00121 1320 AKKKAEEAKKKADAAKKKAEE--------AKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKK 1391
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 829 FEQKYKMVLEENERMNQEIVNLSKEAQKFDSSlgALKTELSYKTQELQEKTREvQERLNEMEQLKEQLENRDSTLQTVER 908
Cdd:PTZ00121 1392 KADEAKKKAEEDKKKADELKKAAAAKKKADEA--KKKAEEKKKADEAKKKAEE-AKKADEAKKKAEEAKKAEEAKKKAEE 1468
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 909 EKTliTEKLQQTLEEVKtltqEKDDLKQLQESLQIERDQLKSDIHDTVNMNIDTQEQLRNALESLKQHQETINTLKSKIS 988
Cdd:PTZ00121 1469 AKK--ADEAKKKAEEAK----KADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKA 1542
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 989 EEVSRNLHMEENTGETKDEFQQKMVgiDKKQDLEAKNTQTLTAD----VKDNEIIEQQRKIFSLIQEKNELQQMLESVIA 1064
Cdd:PTZ00121 1543 EEKKKADELKKAEELKKAEEKKKAE--EAKKAEEDKNMALRKAEeakkAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKI 1620
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1065 EKEQLKT--DLKENIEMTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQ 1142
Cdd:PTZ00121 1621 KAEELKKaeEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEE 1700
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1143 LLNVQEEMSEMQKKINEIENLKNELKNKELTLEHMETERLELAQKLnenyEEVKSITKERKVLKELQKSFETERDHLRGY 1222
Cdd:PTZ00121 1701 AKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKA----EEAKKDEEEKKKIAHLKKEEEKKAEEIRKE 1776
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1223 IREIEATGLQTKeelkiahihlkehqetiDELRRSVSEKTaqiinTQDLEKSHTKLQE----EIPVLHEEQELlpnvkEV 1298
Cdd:PTZ00121 1777 KEAVIEEELDEE-----------------DEKRRMEVDKK-----IKDIFDNFANIIEggkeGNLVINDSKEM-----ED 1829
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1299 SETQETMNELELLTEQSTTkdsttlarIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEalEVKHDQLKEHIRETLAK 1378
Cdd:PTZ00121 1830 SAIKEVADSKNMQLEEADA--------FEKHKFNKNNENGEDGNKEADFNKEKDLKEDDEE--EIEEADEIEKIDKDDIE 1899
|
890 900 910 920
....*....|....*....|....*....|....*....|...
gi 767930917 1379 IQESQSkqeqslNMKEKDNETTKIVSEMEQFKPKDSALLRIEI 1421
Cdd:PTZ00121 1900 REIPNN------NMAGKNNDIIDDKLDKDEYIKRDAEETREEI 1936
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1508-2005 |
3.95e-08 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 59.01 E-value: 3.95e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1508 STIQKQLEAI-NDKLQNKIQEIY---EKEEQFNIKQISEVQEKVNELKQFKEHRKAKDSALQSIESKMleltNRLQESQE 1583
Cdd:COG4717 37 STLLAFIRAMlLERLEKEADELFkpqGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEEL----EELEAELE 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1584 EIQIMIKEKEEMKRVQEALQiERDQLKENTKEIVAKMKESQEKeyqflkmtaVNETQEKMCEIEHLKEQFETQKLNLENI 1663
Cdd:COG4717 113 ELREELEKLEKLLQLLPLYQ-ELEALEAELAELPERLEELEER---------LEELRELEEELEELEAELAELQEELEEL 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1664 ETE-NIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETITRDLKIQEELRIAhmHLKEQQETIDKLRG 1742
Cdd:COG4717 183 LEQlSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLK--EARLLLLIAAALLA 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1743 IVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQLKKQIKDQSLTLSKLEIENLNLAQ 1822
Cdd:COG4717 261 LLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELL 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1823 KLHENLEEMKSVMKERDNLRRvEETLKLERDQLKESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQIS 1902
Cdd:COG4717 341 ELLDRIEELQELLREAEELEE-ELQLEELEQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELE 419
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1903 DIQKDLDksKDELQKKIQELQKkelQLLRVKEDVNMSHKKINEMEQLKKQFEAQNLSMqsvrmdnfQLTKKLHESLEEIR 1982
Cdd:COG4717 420 ELLEALD--EEELEEELEELEE---ELEELEEELEELREELAELEAELEQLEEDGELA--------ELLQELEELKAELR 486
|
490 500
....*....|....*....|...
gi 767930917 1983 IVAKERDELRRIKESLKMERDQF 2005
Cdd:COG4717 487 ELAEEWAALKLALELLEEAREEY 509
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
577-1074 |
6.49e-08 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 58.55 E-value: 6.49e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 577 LSSKVELLREKEDQIKKLQEYIDSQKLENIK---------MDLSYSLESIEDPKQMKQTLfDAETVALDAKRESAFLRSE 647
Cdd:COG5022 805 LLGSRKEYRSYLACIIKLQKTIKREKKLRETeevefslkaEVLIQKFGRSLKAKKRFSLL-KKETIYLQSAQRVELAERQ 883
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 648 NLELKEKMKELATTYKQMENDIQLYqsqLEAKKKMQVDLEKELQSAFNEITKLTSLIDG---KVPKDL-LCNLELEGKIT 723
Cdd:COG5022 884 LQELKIDVKSISSLKLVNLELESEI---IELKKSLSSDLIENLEFKTELIARLKKLLNNidlEEGPSIeYVKLPELNKLH 960
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 724 DLQKELNKEVEE-NEALREEVILLSELKSLPSEVERLRKEIQDKSEELHIITSEKDKlfsevvhkesrvqglLEEIGKTK 802
Cdd:COG5022 961 EVESKLKETSEEyEDLLKKSTILVREGNKANSELKNFKKELAELSKQYGALQESTKQ---------------LKELPVEV 1025
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 803 DDLATTQSNYKSTDQEFQNFKTLHmdfEQKYKMVLEENE-RMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTRE 881
Cdd:COG5022 1026 AELQSASKIISSESTELSILKPLQ---KLKGLLLLENNQlQARYKALKLRRENSLLDDKQLYQLESTENLLKTINVKDLE 1102
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 882 VQERLNEMEqlkeqlENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQ--LKSDIHDTVNMN 959
Cdd:COG5022 1103 VTNRNLVKP------ANVLQFIVAQMIKLNLLQEISKFLSQLVNTLEPVFQKLSVLQLELDGLFWEanLEALPSPPPFAA 1176
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 960 IDTQEQLRNALESLKQH--QETINTLKSKISEEVSRNLHMEENTGETKDEFQQKMVGIDKKQDLEAKNtqtltaDVKDNE 1037
Cdd:COG5022 1177 LSEKRLYQSALYDEKSKlsSSEVNDLKNELIALFSKIFSGWPRGDKLKKLISEGWVPTEYSTSLKGFN------NLNKKF 1250
|
490 500 510
....*....|....*....|....*....|....*..
gi 767930917 1038 IIEQQRKIFSLIQEKNELQQMLESVIAEKEQLKTDLK 1074
Cdd:COG5022 1251 DTPASMSNEKLLSLLNSIDNLLSSYKLEEEVLPATIN 1287
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
638-1669 |
8.72e-08 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 58.13 E-value: 8.72e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 638 KRESAFLRSENLELKEKMKELATTYKQMENDIQLYQSQLEAKKKMQvDLEKELQSAFNEITKLTSLIDGKVPKD--LLCN 715
Cdd:TIGR00606 158 QEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVQ-EHQMELKYLKQYKEKACEIRDQITSKEaqLESS 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 716 LELEGKITDLQKELNKEVEENEALREEVILLSE----LKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESR- 790
Cdd:TIGR00606 237 REIVKSYENELDPLKNRLKEIEHNLSKIMKLDNeikaLKSRKKQMEKDNSELELKMEKVFQGTDEQLNDLYHNHQRTVRe 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 791 -------VQGLLEEIGKTKDDLATTQSNYKSTDQEFQNFKTLHMDFEQKYKMVLEENErMNQEIVNLSKEA---QKFDSS 860
Cdd:TIGR00606 317 kerelvdCQRELEKLNKERRLLNQEKTELLVEQGRLQLQADRHQEHIRARDSLIQSLA-TRLELDGFERGPfseRQIKNF 395
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 861 LGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQE-----KDDLK 935
Cdd:TIGR00606 396 HTLVIERQEDEAKTAAQLCADLQSKERLKQEQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQlegssDRILE 475
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 936 QLQESLQIERDQLKSDIHDTVnmnidtqEQLRNALESLKQHQETINTLKSKISEEVSRNLHMEENTGETKDEFQQKMVGI 1015
Cdd:TIGR00606 476 LDQELRKAERELSKAEKNSLT-------ETLKKEVKSLQNEKADLDRKLRKLDQEMEQLNHHTTTRTQMEMLTKDKMDKD 548
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1016 DKKQDLEAKNTQTLTADVKDneiieqqrkifslIQEKNELQQMLESVIAEKEQLKtdlkeniemtienqEELRLLGDELK 1095
Cdd:TIGR00606 549 EQIRKIKSRHSDELTSLLGY-------------FPNKKQLEDWLHSKSKEINQTR--------------DRLAKLNKELA 601
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1096 KQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNvQEEMSEMQKKINEIENLKNELKNKELTLE 1175
Cdd:TIGR00606 602 SLEQNKNHINNELESKEEQLSSYEDKLFDVCGSQDEESDLERLKEEIEKS-SKQRAMLAGATAVYSQFITQLTDENQSCC 680
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1176 HMETERLELAQKLNENYEEVKSITK----ERKVLKELQKSFETERDHLRGYIrEIEATGLQTKEElkiahiHLKEHQETI 1251
Cdd:TIGR00606 681 PVCQRVFQTEAELQEFISDLQSKLRlapdKLKSTESELKKKEKRRDEMLGLA-PGRQSIIDLKEK------EIPELRNKL 753
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1252 DELRRSVSEKtaqiinTQDLEKSHTKLQEEIPVLHEEQELLPNVKEVSETQETMNELELLTEQSTTK-DSTTLARIEMEr 1330
Cdd:TIGR00606 754 QKVNRDIQRL------KNDIEEQETLLGTIMPEEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKlQGSDLDRTVQQ- 826
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1331 lrLNEKFQESQEEIKSLTKERDNLKTIKE-------ALEVKHDQLKEHIRETLAKIQESQSKQEQSLnmkEKDNETTKIV 1403
Cdd:TIGR00606 827 --VNQEKQEKQHELDTVVSKIELNRKLIQdqqeqiqHLKSKTNELKSEKLQIGTNLQRRQQFEEQLV---ELSTEVQSLI 901
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1404 SEMEQFKPKDSALLRIeiemlgLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKvah 1483
Cdd:TIGR00606 902 REIKDAKEQDSPLETF------LEKDQQEKEELISSKETSNKKAQDKVNDIKEKVKNIHGYMKDIENKIQDGKDDYL--- 972
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1484 cclKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQ-NKIQEIYEKEEQFNIKQISEVQEKVNELKQF-KEHRKAKD 1561
Cdd:TIGR00606 973 ---KQKETELNTVNAQLEECEKHQEKINEDMRLMRQDIDtQKIQERWLQDNLTLRKRENELKEVEEELKQHlKEMGQMQV 1049
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1562 SALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERD--QLKENTKEIVAKMKESQE------KEYQFLKM 1633
Cdd:TIGR00606 1050 LQMKQEHQKLEENIDLIKRNHVLALGRQKGYEKEIKHFKKELREPQfrDAEEKYREMMIVMRTTELvnkdldIYYKTLDQ 1129
|
1050 1060 1070
....*....|....*....|....*....|....*.
gi 767930917 1634 TAVNETQEKMCEIEHLKEQFETQKLNLENIETENIR 1669
Cdd:TIGR00606 1130 AIMKFHSMKMEEINKIIRDLWRSTYRGQDIEYIEIR 1165
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
1225-2011 |
1.29e-07 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 57.42 E-value: 1.29e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1225 EIEATGLQTKEELKIAHIHLKEHQETIDELRRSVSEktAQIINtqdlEKSHTKLQEEIpvlheeQELLPNVKEVSETQET 1304
Cdd:pfam05483 89 KIKKWKVSIEAELKQKENKLQENRKIIEAQRKAIQE--LQFEN----EKVSLKLEEEI------QENKDLIKENNATRHL 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1305 MNELELLTEQSTTKDSttlaRIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVkhdQLKEHIRETLAKIQESQS 1384
Cdd:pfam05483 157 CNLLKETCARSAEKTK----KYEYEREETRQVYMDLNNNIEKMILAFEELRVQAENARL---EMHFKLKEDHEKIQHLEE 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1385 KQEQSLNMKEKDNETTKIVSEMEQFKPKDSALLRIEIEmlglsKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKEN 1464
Cdd:pfam05483 230 EYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESR-----DKANQLEEKTKLQDENLKELIEKKDHLTKELEDIKMS 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1465 IKEIVAKHLETEEELKVAH---CCLKEQEET----INELRVNLSEKETEISTIQKQLEAIndkLQNKIQEIYEKEEQFNI 1537
Cdd:pfam05483 305 LQRSMSTQKALEEDLQIATktiCQLTEEKEAqmeeLNKAKAAHSFVVTEFEATTCSLEEL---LRTEQQRLEKNEDQLKI 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1538 KQIsEVQEKVNELKQfkehrkakdsalqsieskMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIV 1617
Cdd:pfam05483 382 ITM-ELQKKSSELEE------------------MTKFKNNKEVELEELKKILAEDEKLLDEKKQFEKIAEELKGKEQELI 442
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1618 AKMKESQEKEYQFLKMTAVNETQEkmceiEHLKEQFETQKLNLENIETENIRLTQILHENLEEMRSVTKERDDLrsveeT 1697
Cdd:pfam05483 443 FLLQAREKEIHDLEIQLTAIKTSE-----EHYLKEVEDLKTELEKEKLKNIELTAHCDKLLLENKELTQEASDM-----T 512
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1698 LKVERDQLK-ENLRETITRDLKIQEELRIAHMHLKEQQETIDK-LRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKAN 1775
Cdd:pfam05483 513 LELKKHQEDiINCKKQEERMLKQIENLEEKEMNLRDELESVREeFIQKGDEVKCKLDKSEENARSIEYEVLKKEKQMKIL 592
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1776 EHQLITLKKDVNETQKKVSEMEQLKKQIKDQS-----------LTLSKLEIENLNLAQKLHENLEEMKsvmKERDNLRRV 1844
Cdd:pfam05483 593 ENKCNNLKKQIENKNKNIEELHQENKALKKKGsaenkqlnayeIKVNKLELELASAKQKFEEIIDNYQ---KEIEDKKIS 669
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1845 EETLKLERDQLK----ESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKisektiqiSDIQKDLDKSKDELQKKIQ 1920
Cdd:pfam05483 670 EEKLLEEVEKAKaiadEAVKLQKEIDKRCQHKIAEMVALMEKHKHQYDKIIEE--------RDSELGLYKNKEQEQSSAK 741
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1921 ELQKKELQLLRvkedvnmshkkiNEMEQLKKQFEAQnlsmqsvrmdnfqltkklhesleeirivakerdelRRIKESLKM 2000
Cdd:pfam05483 742 AALEIELSNIK------------AELLSLKKQLEIE-----------------------------------KEEKEKLKM 774
|
810
....*....|.
gi 767930917 2001 ERDQFIATLRE 2011
Cdd:pfam05483 775 EAKENTAILKD 785
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
844-1381 |
1.63e-07 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 56.95 E-value: 1.63e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 844 NQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEE 923
Cdd:TIGR04523 74 NNKIKILEQQIKDLNDKLKKNKDKINKLNSDLSKINSEIKNDKEQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKE 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 924 VKTLTQEKDDLKQLQESLQIERDQLKSDIHDTVNMNIDTQEQLRN---ALESLKQHQETINTLKSKISEEVSRNLHMEEN 1000
Cdd:TIGR04523 154 LEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKlelLLSNLKKKIQKNKSLESQISELKKQNNQLKDN 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1001 TGETKDEFQQKMVGIDKKQD-----LEAKNTQTLTADVKDNEIIEQQRKIFSLIQEKNELQQMLESVIAEKEQ-LKTDLK 1074
Cdd:TIGR04523 234 IEKKQQEINEKTTEISNTQTqlnqlKDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQKEQdWNKELK 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1075 ENIEmtiENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRT-----------CDRLAEVEEKLKEKSQQLQEKQQQL 1143
Cdd:TIGR04523 314 SELK---NQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSesensekqrelEEKQNEIEKLKKENQSYKQEIKNLE 390
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1144 LNVQEEMSEMQKKINEIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKERKVLKELQKSFETERDHLRGYI 1223
Cdd:TIGR04523 391 SQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQL 470
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1224 REIEATGLQTKEELKIAHIHLKEHQETIDELrrsvsektaqIINTQDLEKSHTKLQEEIPVLHEEQELLPNVKEVSETQE 1303
Cdd:TIGR04523 471 KVLSRSINKIKQNLEQKQKELKSKEKELKKL----------NEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKI 540
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 767930917 1304 TMNELELLTEQSTTKDSttlaRIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQE 1381
Cdd:TIGR04523 541 SDLEDELNKDDFELKKE----NLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISS 614
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
494-925 |
2.02e-07 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 56.99 E-value: 2.02e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 494 ENIESELNSLRADYDNLVLDYEQLRTEKEEMELKLKE-KNDLDEFEALERktkkdqemQLIHEISNLKNLVKHAEVYNQD 572
Cdd:TIGR02168 694 AELEKALAELRKELEELEEELEQLRKELEELSRQISAlRKDLARLEAEVE--------QLEERIAQLSKELTELEAEIEE 765
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 573 LENELSSKVELLREKEDQIKKLQEYIDsqklenikmdlsyslesiedpkqmkqtlfdaetvalDAKRESAFLRSENLELK 652
Cdd:TIGR02168 766 LEERLEEAEEELAEAEAEIEELEAQIE------------------------------------QLKEELKALREALDELR 809
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 653 EKMKELATTYKQMENDIQLYQSQLEAKKKMQVDLEKELQsafneitkltslidgkvpkdllcnlELEGKITDLQKELNKE 732
Cdd:TIGR02168 810 AELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIE-------------------------ELSEDIESLAAEIEEL 864
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 733 VEENEALREEVILLSELK-SLPSEVERLRKEIQDKSEELHIItsekdklfsevvhkESRVQGLLEEIGKTKDDLATTQSN 811
Cdd:TIGR02168 865 EELIEELESELEALLNERaSLEEALALLRSELEELSEELREL--------------ESKRSELRRELEELREKLAQLELR 930
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 812 YKSTDQEFQNFKTlhmDFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQ 891
Cdd:TIGR02168 931 LEGLEVRIDNLQE---RLSEEYSLTLEEAEALENKIEDDEEEARRRLKRLENKIKELGPVNLAAIEEYEELKERYDFLTA 1007
|
410 420 430
....*....|....*....|....*....|....*
gi 767930917 892 LKEQL-ENRDSTLQTVEREKTLITEKLQQTLEEVK 925
Cdd:TIGR02168 1008 QKEDLtEAKETLEEAIEEIDREARERFKDTFDQVN 1042
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
1431-2134 |
2.18e-07 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 56.77 E-value: 2.18e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1431 QESHDEMKSVAKEKDDLQRLQEV------LQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNLSEKE 1504
Cdd:pfam12128 217 RLNRQQVEHWIRDIQAIAGIMKIrpeftkLQQEFNTLESAELRLSHLHFGYKSDETLIASRQEERQETSAELNQLLRTLD 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1505 TEIST----IQKQLEAINDKLQNKIQEIYEKEEQFNIKQisevQEKVNELKQFKEHRKAKDSALQSIESKMLELTNRLQE 1580
Cdd:pfam12128 297 DQWKEkrdeLNGELSAADAAVAKDRSELEALEDQHGAFL----DADIETAAADQEQLPSWQSELENLEERLKALTGKHQD 372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1581 SQEEIQIMI-KEKEEMKRVQEALQIERDqlkeNTKEIVAKMKESQEKEYQFLKMTAVNETQEKMCEIEHLKEQFEtqkln 1659
Cdd:pfam12128 373 VTAKYNRRRsKIKEQNNRDIAGIKDKLA----KIREARDRQLAVAEDDLQALESELREQLEAGKLEFNEEEYRLK----- 443
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1660 lENIETENIRLTQ--ILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETITRDLKIQEELRIAHMHLKEQQETI 1737
Cdd:pfam12128 444 -SRLGELKLRLNQatATPELLLQLENFDERIERAREEQEAANAEVERLQSELRQARKRRDQASEALRQASRRLEERQSAL 522
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1738 DKLRGIVSEKTDKLSNMqkdLENSNAKLQEKIQELKANEHQLIT-LKKDVNETQKKvsemeqlkkqikdQSLTLSKLeie 1816
Cdd:pfam12128 523 DELELQLFPQAGTLLHF---LRKEAPDWEQSIGKVISPELLHRTdLDPEVWDGSVG-------------GELNLYGV--- 583
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1817 NLNLAQKLHENLEEMksvmkerdnlrrvEETLKLERDQLKESLQETKARDLEIQQELKTARM-LSKEHKETVDKLR--EK 1893
Cdd:pfam12128 584 KLDLKRIDVPEWAAS-------------EEELRERLDKAEEALQSAREKQAAAEEQLVQANGeLEKASREETFARTalKN 650
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1894 ISEKTIQISDIQKDLdksKDELQKKIQELQKKELQLLRVKEdvnmSHKKINEMEQlKKQFEAQNLSMQSVRMdnfqltkk 1973
Cdd:pfam12128 651 ARLDLRRLFDEKQSE---KDKKNKALAERKDSANERLNSLE----AQLKQLDKKH-QAWLEEQKEQKREART-------- 714
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1974 lhESLEEIRIVAKERD-ELRRIKESLKMERDQF---IATLREMIARDRQNHQVKPEKRL-LSDGQQHLTESLrEKCSRIK 2048
Cdd:pfam12128 715 --EKQAYWQVVEGALDaQLALLKAAIAARRSGAkaeLKALETWYKRDLASLGVDPDVIAkLKREIRTLERKI-ERIAVRR 791
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2049 ELLKRYSEMDDHYECLNRLSLDLEKEIEFQK--ELSMRVKANLSLPYLQTKHIEKLFTANQRCSMEFHRIMKKLKYVLSY 2126
Cdd:pfam12128 792 QEVLRYFDWYQETWLQRRPRLATQLSNIERAisELQQQLARLIADTKLRRAKLEMERKASEKQQVRLSENLRGLRCEMSK 871
|
....*...
gi 767930917 2127 VTKIKEEQ 2134
Cdd:pfam12128 872 LATLKEDA 879
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
1636-1858 |
2.89e-07 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 55.79 E-value: 2.89e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1636 VNETQEKMC--EIEHLKEQFETQKLNLENIET---ENI-RLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENL 1709
Cdd:PHA02562 178 ELNQQIQTLdmKIDHIQQQIKTYNKNIEEQRKkngENIaRKQNKYDELVEEAKTIKAEIEELTDELLNLVMDIEDPSAAL 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1710 RETITRDLKIQEEL----RIAHMHLKEQQ-----ETIDKLRGIVSEKTDKLSNMQKDLEnsnaKLQEKIQELKANEHQLI 1780
Cdd:PHA02562 258 NKLNTAAAKIKSKIeqfqKVIKMYEKGGVcptctQQISEGPDRITKIKDKLKELQHSLE----KLDTAIDELEEIMDEFN 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1781 TLKKDVNETQKKVSEMEQ----LKKQIKDQSLTLSKLEIENLNLAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQLK 1856
Cdd:PHA02562 334 EQSKKLLELKNKISTNKQslitLVDKAKKVKAAIEELQAEFVDNAEELAKLQDELDKIVKTKSELVKEKYHRGIVTDLLK 413
|
..
gi 767930917 1857 ES 1858
Cdd:PHA02562 414 DS 415
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
1521-1914 |
3.42e-07 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 55.67 E-value: 3.42e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1521 LQNKIQEIYEKEEQFNIKQISEVQEKVNELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQE 1600
Cdd:pfam07888 32 LQNRLEECLQERAELLQAQEAANRQREKEKERYKRDREQWERQRRELESRVAELKEELRQSREKHEELEEKYKELSASSE 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1601 ALQIERDQLKENTKEIVAKMKESQEKeyqflKMTAVNETQEKMCEIEHLKEQFETQKLNLENIETENIRLTQILHENLEE 1680
Cdd:pfam07888 112 ELSEEKDALLAQRAAHEARIRELEED-----IKTLTQRVLERETELERMKERAKKAGAQRKEEEAERKQLQAKLQQTEEE 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1681 MRSVTKERDDLRSVEEtlkvERDQLKENLRETITRdlkIQEELRIAHMHLKEQQETIDKLRGI-----VSEKTDKLsnMQ 1755
Cdd:pfam07888 187 LRSLSKEFQELRNSLA----QRDTQVLQLQDTITT---LTQKLTTAHRKEAENEALLEELRSLqerlnASERKVEG--LG 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1756 KDLENSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSEME---QLKKQIKDQSLTLSKLEIENLNLA-QKLHENLEEm 1831
Cdd:pfam07888 258 EELSSMAAQRDRTQAELHQARLQAAQLTLQLADASLALREGRarwAQERETLQQSAEADKDRIEKLSAElQRLEERLQE- 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1832 ksvmkERDNLRRVEETLKLERDQLKESLQETKaRDLeiqQELKTARMLSKEHKEtvdKLREKISEKTIQISDIQKDLDKS 1911
Cdd:pfam07888 337 -----ERMEREKLEVELGREKDCNRVQLSESR-REL---QELKASLRVAQKEKE---QLQAEKQELLEYIRQLEQRLETV 404
|
...
gi 767930917 1912 KDE 1914
Cdd:pfam07888 405 ADA 407
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
480-973 |
4.05e-07 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 55.82 E-value: 4.05e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 480 SEIEWNPATKLLNQEN-IESELNSLRADYDNLVLDYEQLRTEKEEMELKLKE-KNDLDEFEALERktkkdqemqlihEIS 557
Cdd:PRK02224 194 AQIEEKEEKDLHERLNgLESELAELDEEIERYEEQREQARETRDEADEVLEEhEERREELETLEA------------EIE 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 558 NLKNLVKHAEVYNQDLENELSSKVELLREKEDQIKKLQ-----EYIDSQKLENIKMDLSYSLESIEDPKQMKQTLFDAET 632
Cdd:PRK02224 262 DLRETIAETEREREELAEEVRDLRERLEELEEERDDLLaeaglDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHN 341
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 633 VALDAKRESAF-LRSENLELKEKMKELATTYKQMENDIQLYQSQLEAKKKMQVDLEKELQSAFNEITKLTSLIDgkvpkD 711
Cdd:PRK02224 342 EEAESLREDADdLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLE-----E 416
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 712 LLCNL-ELEGKITDLQ---KELNKEVEENEALREE---------------VILLSE----LKSLPSEVERLRKEIQDKSE 768
Cdd:PRK02224 417 LREERdELREREAELEatlRTARERVEEAEALLEAgkcpecgqpvegsphVETIEEdrerVEELEAELEDLEEEVEEVEE 496
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 769 ELHIITSEKdKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEFQNFKTLHMDFEQKYKMVLEENERMNQEIV 848
Cdd:PRK02224 497 RLERAEDLV-EAEDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVA 575
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 849 NLSKEAQKFDSSLGALKT----------------ELSYKTQELQEKTREVQERLNEMEQLKEQLENR--DSTLQTVEREK 910
Cdd:PRK02224 576 ELNSKLAELKERIESLERirtllaaiadaedeieRLREKREALAELNDERRERLAEKRERKRELEAEfdEARIEEAREDK 655
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 767930917 911 TLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKS--DIHDTVNMNIDTQEQLRNALESL 973
Cdd:PRK02224 656 ERAEEYLEQVEEKLDELREERDDLQAEIGAVENELEELEElrERREALENRVEALEALYDEAEEL 720
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
1223-1805 |
4.24e-07 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 55.68 E-value: 4.24e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1223 IREIEATGLQTKEELKIAHIHLKEHQETIDELRRSVSEKTAQIINTQDLEKSHTKLQEEIPVLHEEQELLPNvkEVSETQ 1302
Cdd:PRK01156 161 INSLERNYDKLKDVIDMLRAEISNIDYLEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMD--DYNNLK 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1303 ETMNELELLTEqsttkdsttlariemERLRLNEKFQESQEEIKSLTKERDNLKTIKEalevkhdqlkEHIRETLAKIQES 1382
Cdd:PRK01156 239 SALNELSSLED---------------MKNRYESEIKTAESDLSMELEKNNYYKELEE----------RHMKIINDPVYKN 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1383 QSKQEQSLNMKEKDNETTKIVSEMeqfkpkDSALLRIEIEMLGLSKrLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLK 1462
Cdd:PRK01156 294 RNYINDYFKYKNDIENKKQILSNI------DAEINKYHAIIKKLSV-LQKDYNDYIKKKSRYDDLNNQILELEGYEMDYN 366
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1463 ENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQN----------KIQEIYEKE 1532
Cdd:PRK01156 367 SYLKSIESLKKKIEEYSKNIERMSAFISEILKIQEIDPDAIKKELNEINVKLQDISSKVSSlnqriralreNLDELSRNM 446
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1533 EQFNIKQISEVQEKVNELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQ-EALQIERDQLKE 1611
Cdd:PRK01156 447 EMLNGQSVCPVCGTTLGEEKSNHIINHYNEKKSRLEEKIREIEIEVKDIDEKIVDLKKRKEYLESEEiNKSINEYNKIES 526
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1612 NTKEIVAKMKESQEKEYQFLKMTAVNEtQEKMCEIEHLkEQFETQKLNL----ENIETENIR-----LTQILHENLEEMR 1682
Cdd:PRK01156 527 ARADLEDIKIKINELKDKHDKYEEIKN-RYKSLKLEDL-DSKRTSWLNAlaviSLIDIETNRsrsneIKKQLNDLESRLQ 604
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1683 SVTKERDDLRSVEETLKVERDQLKENLRETIT--RDLKIQ-EELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLE 1759
Cdd:PRK01156 605 EIEIGFPDDKSYIDKSIREIENEANNLNNKYNeiQENKILiEKLRGKIDNYKKQIAEIDSIIPDLKEITSRINDIEDNLK 684
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|...
gi 767930917 1760 NSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSE-------MEQLKKQIKD 1805
Cdd:PRK01156 685 KSRKALDDAKANRARLESTIEILRTRINELSDRINDinetlesMKKIKKAIGD 737
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1105-1828 |
4.26e-07 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 55.80 E-value: 4.26e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1105 KNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNKELT----------- 1173
Cdd:TIGR04523 25 KNIANKQDTEEKQLEKKLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKnkdkinklnsd 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1174 LEHMETERLELAQKLNENYEEVKSITKERKVLKELQKSF-------ETERDHLRGYIREIEATGLQTKEELKIAHIHLKE 1246
Cdd:TIGR04523 105 LSKINSEIKNDKEQKNKLEVELNKLEKQKKENKKNIDKFlteikkkEKELEKLNNKYNDLKKQKEELENELNLLEKEKLN 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1247 HQETIDELRRSVSEKTAQIINTQDLEKSHTKLQEEIPVLHEEQELLPNvkEVSETQETMNELELLTEQSTTKDSTTLARI 1326
Cdd:TIGR04523 185 IQKNIDKIKNKLLKLELLLSNLKKKIQKNKSLESQISELKKQNNQLKD--NIEKKQQEINEKTTEISNTQTQLNQLKDEQ 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1327 EMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQSLNmKEKDNETTKIVSEM 1406
Cdd:TIGR04523 263 NKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQKEQDWNKELKSELKNQEKKLEEIQ-NQISQNNKIISQLN 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1407 EQFKPKDSALLRIEIEMLGLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCL 1486
Cdd:TIGR04523 342 EQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEK 421
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1487 KEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNkiQEIYEKEEQFNIKQISevqekvNELKQFKEHRKAKDSALQS 1566
Cdd:TIGR04523 422 ELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKN--LDNTRESLETQLKVLS------RSINKIKQNLEQKQKELKS 493
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1567 IESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALqierdqlkenTKEIVAKMKESQEKEYQFLKMTAVNETQEKMCEI 1646
Cdd:TIGR04523 494 KEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKL----------ESEKKEKESKISDLEDELNKDDFELKKENLEKEI 563
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1647 EHLKEQFETQKLNLENIETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETITRDLKIQEELRIA 1726
Cdd:TIGR04523 564 DEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKNKL 643
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1727 HMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQLKKQIKDQ 1806
Cdd:TIGR04523 644 KQEVKQIKETIKEIRNKWPEIIKKIKESKTKIDDIIELMKDWLKELSLHYKKYITRMIRIKDLPKLEEKYKEIEKELKKL 723
|
730 740
....*....|....*....|..
gi 767930917 1807 SLTLSKLEIENLNLAQKLHENL 1828
Cdd:TIGR04523 724 DEFSKELENIIKNFNKKFDDAF 745
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
507-1239 |
4.78e-07 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 55.75 E-value: 4.78e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 507 YDNLVLDYEQLRTEKEEMELKLKEKNDLDEFEALERKTKKDQEMQLIHEISNLKNLVKHAEVYNQDLENELSSKVELLRE 586
Cdd:pfam02463 228 YLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLER 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 587 KEDQIKKLQEyIDSQKLENIKMDLSYSLESIEDPKQMKQTLFDAETVALDAKRESAFLRSENLELKEKMKELATTYKQME 666
Cdd:pfam02463 308 RKVDDEEKLK-ESEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERL 386
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 667 ndiqlyQSQLEAKKKMQVDLEKELQSAFNEITKLTSLIDGKVPKDLLCNLELEGKITDLQKELNKEVEENEALREEVILL 746
Cdd:pfam02463 387 ------SSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKL 460
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 747 SELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEfqnfKTLH 826
Cdd:pfam02463 461 LKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLG----DLGV 536
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 827 MDFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTV 906
Cdd:pfam02463 537 AVENYKVAISTAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEAD 616
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 907 EREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIHDTVNMNIDTQEQLRNALESLKQHQETIN----- 981
Cdd:pfam02463 617 EDDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKeeilr 696
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 982 TLKSKISEEVSRNLHMEENTGETKDEFQQKMVGIDKKQDLEAKNTQTLTADVKDNEIIEQQRKIFSLIQEKNELQQMLES 1061
Cdd:pfam02463 697 RQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKEL 776
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1062 VIAEKEQLKTDLKENIEMTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLKEKS------QQ 1135
Cdd:pfam02463 777 AEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLeklaeeEL 856
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1136 LQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKERKVLKELQKSFETE 1215
Cdd:pfam02463 857 ERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEE 936
|
730 740
....*....|....*....|....
gi 767930917 1216 RDHLRGYIREIEATGLQTKEELKI 1239
Cdd:pfam02463 937 PEELLLEEADEKEKEENNKEEEEE 960
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1579-2067 |
5.05e-07 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 55.43 E-value: 5.05e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1579 QESQEEIQIMIKEKEEmKRVQEALQIERDQLKENTKEIvaKMKESQEKEYQFLKMTA---VNETQEKMCEIEHLKEQFET 1655
Cdd:PRK02224 186 RGSLDQLKAQIEEKEE-KDLHERLNGLESELAELDEEI--ERYEEQREQARETRDEAdevLEEHEERREELETLEAEIED 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1656 QKLNLENIETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETITRDLKIQEELRIAHMHLKEQQE 1735
Cdd:PRK02224 263 LRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNE 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1736 TIDKLRGIV-------SEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDVNET-----------QKKVSEME 1797
Cdd:PRK02224 343 EAESLREDAddleeraEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDApvdlgnaedflEELREERD 422
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1798 QLKKQIKDQSLTLSKLEiENLNLAQKLHE---------------NLEEMKSVMKERDNLRRVEETLKLERDQLK------ 1856
Cdd:PRK02224 423 ELREREAELEATLRTAR-ERVEEAEALLEagkcpecgqpvegspHVETIEEDRERVEELEAELEDLEEEVEEVEerlera 501
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1857 ESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKDLDKSKDELQKKIQELQKKELQLLRVKEDV 1936
Cdd:PRK02224 502 EDLVEAEDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKL 581
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1937 NMSHKKINEMEQLKKQFEAqnlsmqsvRMDNFQLTKKLHESLEEIrivaKERDELRRIKESLKMERdqfIATLREMIARD 2016
Cdd:PRK02224 582 AELKERIESLERIRTLLAA--------IADAEDEIERLREKREAL----AELNDERRERLAEKRER---KRELEAEFDEA 646
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|.
gi 767930917 2017 RQNhQVKPEKRLLSDGQQHLTESLREKCSRIKELLKRYSEMDDHYECLNRL 2067
Cdd:PRK02224 647 RIE-EAREDKERAEEYLEQVEEKLDELREERDDLQAEIGAVENELEELEEL 696
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
984-1602 |
6.42e-07 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 55.29 E-value: 6.42e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 984 KSKISEEVSRNLHMEENTGETKDEFQQKMVGIDKKQDLEAKNTQTLTADVKDNEIIEQQRKIFSLIQEKNElqqMLESVI 1063
Cdd:PRK01156 151 RKKILDEILEINSLERNYDKLKDVIDMLRAEISNIDYLEEKLKSSNLELENIKKQIADDEKSHSITLKEIE---RLSIEY 227
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1064 AEKEQLKTDLKENIEMTIENQEELRLLGDELKKQQEIVAQEKNHAIKkegelsrtcdrLAEVEEKLKEKSQQLQEKQqql 1143
Cdd:PRK01156 228 NNAMDDYNNLKSALNELSSLEDMKNRYESEIKTAESDLSMELEKNNY-----------YKELEERHMKIINDPVYKN--- 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1144 lnvQEEMSEMQKKINEIENLKNELKN--KELTLEHMETERLELAQKLNENYEEVKS----ITKERKVLKE-------LQK 1210
Cdd:PRK01156 294 ---RNYINDYFKYKNDIENKKQILSNidAEINKYHAIIKKLSVLQKDYNDYIKKKSryddLNNQILELEGyemdynsYLK 370
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1211 SFETERDHLRGYIREIEATGLQTKEELKIAHIHLKEHQETIDELRRSVsektaqiintQDLEKSHTKLQEEIPVLHEEQE 1290
Cdd:PRK01156 371 SIESLKKKIEEYSKNIERMSAFISEILKIQEIDPDAIKKELNEINVKL----------QDISSKVSSLNQRIRALRENLD 440
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1291 llpnvkEVSETQETMNELELL----TEQSTTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEvkhd 1366
Cdd:PRK01156 441 ------ELSRNMEMLNGQSVCpvcgTTLGEEKSNHIINHYNEKKSRLEEKIREIEIEVKDIDEKIVDLKKRKEYLE---- 510
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1367 qlKEHIRETLAKIQESQSKQEQSLNMKEKDNETTKIVSEMEQFKPKDSALlrieieMLGLSKRLQESHDEMKSVAKEKDd 1446
Cdd:PRK01156 511 --SEEINKSINEYNKIESARADLEDIKIKINELKDKHDKYEEIKNRYKSL------KLEDLDSKRTSWLNALAVISLID- 581
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1447 lqrlQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQ 1526
Cdd:PRK01156 582 ----IETNRSRSNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSIREIENEANNLNNKYNEIQENKILIEKLRGKIDNYKK 657
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1527 EIYEKEEQfnIKQISEVQEKVNE-----------LKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQIM---IKEK 1592
Cdd:PRK01156 658 QIAEIDSI--IPDLKEITSRINDiednlkksrkaLDDAKANRARLESTIEILRTRINELSDRINDINETLESMkkiKKAI 735
|
650
....*....|
gi 767930917 1593 EEMKRVQEAL 1602
Cdd:PRK01156 736 GDLKRLREAF 745
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
1500-2090 |
6.56e-07 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 55.12 E-value: 6.56e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1500 LSEKETEISTIQKQLeaindklqNKIQEIYEKEEQFNIKQISEVQEKVNELKQfkeHRKAKDSALQSIESKMLELTNRLQ 1579
Cdd:pfam15921 80 LEEYSHQVKDLQRRL--------NESNELHEKQKFYLRQSVIDLQTKLQEMQM---ERDAMADIRRRESQSQEDLRNQLQ 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1580 ESQEEIQIMIKEKEEM--------KRVQEALQIERDQLKENTKEIVAKMKESQEKEYQFLKM---------TAVNET-QE 1641
Cdd:pfam15921 149 NTVHELEAAKCLKEDMledsntqiEQLRKMMLSHEGVLQEIRSILVDFEEASGKKIYEHDSMstmhfrslgSAISKIlRE 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1642 KMCEIEHLK-------EQFETQKLNLEN-----IETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENL 1709
Cdd:pfam15921 229 LDTEISYLKgrifpveDQLEALKSESQNkiellLQQHQDRIEQLISEHEVEITGLTEKASSARSQANSIQSQLEIIQEQA 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1710 RETITRDLKiqeelriahmHLKEQQETIDKLRGIVSEKT----DKLSNMQKDLENSNAKLQEK-------IQELKANEHQ 1778
Cdd:pfam15921 309 RNQNSMYMR----------QLSDLESTVSQLRSELREAKrmyeDKIEELEKQLVLANSELTEArterdqfSQESGNLDDQ 378
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1779 LITLKKDVNETQKKVSEMEQLKKQIKDQ----SLTLSKL--EIENLNL-AQKLHENLEEMKSVMK---ERDNLRRVEETL 1848
Cdd:pfam15921 379 LQKLLADLHKREKELSLEKEQNKRLWDRdtgnSITIDHLrrELDDRNMeVQRLEALLKAMKSECQgqmERQMAAIQGKNE 458
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1849 KLER-DQLKESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKDLDKSKDELQKKIQELQKkel 1927
Cdd:pfam15921 459 SLEKvSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKERAIEATNAEITKLRSRVDLKLQELQH--- 535
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1928 qlLRVKEDvNMSHKKiNEMEQLKKQFEAQNLSMQSVRMDNFQLTKKLHES-------LEEIRIVAKERDELRRIKESLKM 2000
Cdd:pfam15921 536 --LKNEGD-HLRNVQ-TECEALKLQMAEKDKVIEILRQQIENMTQLVGQHgrtagamQVEKAQLEKEINDRRLELQEFKI 611
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2001 ERDQFIATLREMIAR--DRQNHQVK------PEKRLLSDGQQHLTESLREkcsrIKELLKRYSEMDDHYECLNRLSLDLE 2072
Cdd:pfam15921 612 LKDKKDAKIRELEARvsDLELEKVKlvnagsERLRAVKDIKQERDQLLNE----VKTSRNELNSLSEDYEVLKRNFRNKS 687
|
650
....*....|....*....
gi 767930917 2073 KEIEF-QKELSMRVKANLS 2090
Cdd:pfam15921 688 EEMETtTNKLKMQLKSAQS 706
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
1690-1909 |
8.39e-07 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 54.64 E-value: 8.39e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1690 DLRSVEETLKVERDQLKENLRETITRDLK---IQEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQ 1766
Cdd:PHA02562 161 DISVLSEMDKLNKDKIRELNQQIQTLDMKidhIQQQIKTYNKNIEEQRKKNGENIARKQNKYDELVEEAKTIKAEIEELT 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1767 EKIQEL-KANEHQLITLKKDVNETQKKVSEMEQLKK----------------QIKDQSLTLSKLEIENLNLAQKLH---E 1826
Cdd:PHA02562 241 DELLNLvMDIEDPSAALNKLNTAAAKIKSKIEQFQKvikmyekggvcptctqQISEGPDRITKIKDKLKELQHSLEkldT 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1827 NLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQK 1906
Cdd:PHA02562 321 AIDELEEIMDEFNEQSKKLLELKNKISTNKQSLITLVDKAKKVKAAIEELQAEFVDNAEELAKLQDELDKIVKTKSELVK 400
|
...
gi 767930917 1907 DLD 1909
Cdd:PHA02562 401 EKY 403
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1819-2018 |
1.01e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 53.61 E-value: 1.01e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1819 NLAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKtarmlskehketvdKLREKISEKT 1898
Cdd:COG4942 24 EAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELA--------------ALEAELAELE 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1899 IQISDIQKDLDKSKDELQKKIQELQK----KELQLLRVKEDVNMSHKKINEMEQLKKQFEAQNLSMQSVRMDNFQLTKKL 1974
Cdd:COG4942 90 KEIAELRAELEAQKEELAELLRALYRlgrqPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAEL 169
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 767930917 1975 HESLEEIRIVAKERDELRRIKESLKMERDQFIATLREMIARDRQ 2018
Cdd:COG4942 170 EAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAA 213
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
1462-2054 |
1.28e-06 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 54.20 E-value: 1.28e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1462 KENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQN--KIQEIYEKEEQFNIKQ 1539
Cdd:TIGR00618 186 FAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYLTQkrEAQEEQLKKQQLLKQL 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1540 ISEVQEKVNELKQFKEHRKAKDSA-----LQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTK 1614
Cdd:TIGR00618 266 RARIEELRAQEAVLEETQERINRArkaapLAAHIKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRR 345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1615 EIVAKMKESQEKEYQFLKMTAVNETQEKMCEIEHLKEQFETQKLNLENIETENIRLTQILHENLEEMRSVTKERDDLRSv 1694
Cdd:TIGR00618 346 LLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKELDILQREQATIDTRTSAFRDLQG- 424
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1695 eeTLKVERDQLKENLRETITRDLKIQEELRIAHMHLKEQQETIDKLRgivsEKTDKLSNMQKDLENSNAKLQE---KIQE 1771
Cdd:TIGR00618 425 --QLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLK----EREQQLQTKEQIHLQETRKKAVvlaRLLE 498
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1772 LKANEHQLI----------------------------TLKKDVNETQKKVSEMEQLKKQIKDQSLTLSKLEIENLNLAQK 1823
Cdd:TIGR00618 499 LQEEPCPLCgscihpnparqdidnpgpltrrmqrgeqTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQC 578
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1824 LHENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQ------ETKARDLEIQQELKT-----ARMLSKEHKETVDKLRE 1892
Cdd:TIGR00618 579 DNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHallrklQPEQDLQDVRLHLQQcsqelALKLTALHALQLTLTQE 658
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1893 KISEKTIQISDIQKDLDKSKdelQKKIQELQKKELQLLRVKEDVNMSHKKINEMEQ----LKKQFEAQNLSMQSVRMDNF 1968
Cdd:TIGR00618 659 RVREHALSIRVLPKELLASR---QLALQKMQSEKEQLTYWKEMLAQCQTLLRELEThieeYDREFNEIENASSSLGSDLA 735
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1969 QLTKKLHESLEEIRIVAKERDELRrikeslkmERDQFIATLREMIA--RDRQNHQVKPEKRLLSDGQQHLTESLREKCSR 2046
Cdd:TIGR00618 736 AREDALNQSLKELMHQARTVLKAR--------TEAHFNNNEEVTAAlqTGAELSHLAAEIQFFNRLREEDTHLLKTLEAE 807
|
....*...
gi 767930917 2047 IKELLKRY 2054
Cdd:TIGR00618 808 IGQEIPSD 815
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
747-952 |
1.33e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 53.23 E-value: 1.33e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 747 SELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEFQNFKTLH 826
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 827 MDFEQKYKMVLEENERMNQ----EIVNLSKEAQKFDSSLGALKtelsYKTQELQEKTREVQERLNEMEQLKEQLENRDST 902
Cdd:COG4942 100 EAQKEELAELLRALYRLGRqpplALLLSPEDFLDAVRRLQYLK----YLAPARREQAEELRADLAELAALRAELEAERAE 175
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 767930917 903 LQTVEREKTLITEKLQQTLEE----VKTLTQEKDDLKQLQESLQIERDQLKSDI 952
Cdd:COG4942 176 LEALLAELEEERAALEALKAErqklLARLEKELAELAAELAELQQEAEELEALI 229
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1288-1534 |
1.41e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 53.23 E-value: 1.41e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1288 EQELLPNVKEVSETQETMNElellTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQ 1367
Cdd:COG4942 26 EAELEQLQQEIAELEKELAA----LKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEA 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1368 LKEHIRETLAKIQESQSKQEQSLnmkekdnettkivsemeQFKPKDSALLRIEIEMLG-LSKRLQEshdEMKSVAKEKDD 1446
Cdd:COG4942 102 QKEELAELLRALYRLGRQPPLAL-----------------LLSPEDFLDAVRRLQYLKyLAPARRE---QAEELRADLAE 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1447 LQRLQEVLQSESDQLKENIKEIVAKHLETEEElkvahccLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQ 1526
Cdd:COG4942 162 LAALRAELEAERAELEALLAELEEERAALEAL-------KAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEA 234
|
....*...
gi 767930917 1527 EIYEKEEQ 1534
Cdd:COG4942 235 EAAAAAER 242
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
509-1160 |
1.46e-06 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 53.87 E-value: 1.46e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 509 NLVLDYEQLRTEKEEMELKLKEKNDLDEfealERKTKKDQEMQLIHEISNLKNLVKHAEVYNQDLENELSSKVELLREKE 588
Cdd:TIGR04523 104 DLSKINSEIKNDKEQKNKLEVELNKLEK----QKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLE 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 589 DQIKKLQEYIDSQKLENIKmdLSYSLESIEDPKQMKQTLfdaetvaldaKRESAFLRSENLELKEKMKELATTYKQMEND 668
Cdd:TIGR04523 180 KEKLNIQKNIDKIKNKLLK--LELLLSNLKKKIQKNKSL----------ESQISELKKQNNQLKDNIEKKQQEINEKTTE 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 669 IQLYQSQLEAKKKMQVDLEKELQSAFNEITKLTSLIDGKVPKDLLCNLELEG----KITDLQKELNKEVEENEalREEVI 744
Cdd:TIGR04523 248 ISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDlnnqKEQDWNKELKSELKNQE--KKLEE 325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 745 LLSELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEFQNFKT 824
Cdd:TIGR04523 326 IQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEK 405
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 825 LHMDFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQ 904
Cdd:TIGR04523 406 LNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLE 485
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 905 TVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIHDTVNMNIDTQEQLRNALESLKQHQ--ETINT 982
Cdd:TIGR04523 486 QKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFELKKENleKEIDE 565
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 983 LKSKISEEVSRNLHMEENTGETKDEFQQKMVGIDKKQDLEAKNTQTLTADVKDNEIIEQQRKifSLIQEKNELQQMLESV 1062
Cdd:TIGR04523 566 KNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENE--KLSSIIKNIKSKKNKL 643
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1063 IAEKEQLKTDLKENIEMT---IENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEK 1139
Cdd:TIGR04523 644 KQEVKQIKETIKEIRNKWpeiIKKIKESKTKIDDIIELMKDWLKELSLHYKKYITRMIRIKDLPKLEEKYKEIEKELKKL 723
|
650 660
....*....|....*....|.
gi 767930917 1140 QQQLLNVQEEMSEMQKKINEI 1160
Cdd:TIGR04523 724 DEFSKELENIIKNFNKKFDDA 744
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
1520-2167 |
1.49e-06 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 53.96 E-value: 1.49e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1520 KLQNKIQEIYEKEEQFNIKQISEVQEKVNELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQ 1599
Cdd:pfam05483 78 RLYSKLYKEAEKIKKWKVSIEAELKQKENKLQENRKIIEAQRKAIQELQFENEKVSLKLEEEIQENKDLIKENNATRHLC 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1600 EALQIERDQLKENTKEIvakmkESQEKEYQFLKMTAVNETQEKMCEIEHLKEQFETQKLNLENIETENirltqilHENLE 1679
Cdd:pfam05483 158 NLLKETCARSAEKTKKY-----EYEREETRQVYMDLNNNIEKMILAFEELRVQAENARLEMHFKLKED-------HEKIQ 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1680 EMRSVTKERDDLRSVEETLKVERDQLKENLRETITRDLkiqEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSnmqKDLE 1759
Cdd:pfam05483 226 HLEEEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLL---EESRDKANQLEEKTKLQDENLKELIEKKDHLT---KELE 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1760 NSNAKLQEKIQELKANEHQL-ITLKKDVNETQKKVSEMEQLKKQIKDQSLTLSKLEIENLNLAQKLHenleemksvmKER 1838
Cdd:pfam05483 300 DIKMSLQRSMSTQKALEEDLqIATKTICQLTEEKEAQMEELNKAKAAHSFVVTEFEATTCSLEELLR----------TEQ 369
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1839 DNLRRVEETLKLERDQLKEslqetKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKDLDKSKDE---- 1914
Cdd:pfam05483 370 QRLEKNEDQLKIITMELQK-----KSSELEEMTKFKNNKEVELEELKKILAEDEKLLDEKKQFEKIAEELKGKEQElifl 444
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1915 LQKKIQELQKKELQLLRVKEDVNMSHKKINEMEQLKKQFEAQNLSMQS----VRMDNFQLTKKLHESLEEIRivAKERDE 1990
Cdd:pfam05483 445 LQAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKTELEKEKLKNIELTAhcdkLLLENKELTQEASDMTLELK--KHQEDI 522
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1991 LRRIKESLKMERDQFIATLREMIARDRQNHQVKPEKRLLSDGQQHLTESLREKCSRIKELLKRYSEMDDHYECLNRLSLD 2070
Cdd:pfam05483 523 INCKKQEERMLKQIENLEEKEMNLRDELESVREEFIQKGDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQ 602
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2071 LEKEIEFQKELSMRVKANLSLPYLQTKHIEKLFTANQRCSMEFHRIMKKLKYVLSYVTKIKEEQHESinkfEMDFIDEVE 2150
Cdd:pfam05483 603 IENKNKNIEELHQENKALKKKGSAENKQLNAYEIKVNKLELELASAKQKFEEIIDNYQKEIEDKKIS----EEKLLEEVE 678
|
650
....*....|....*..
gi 767930917 2151 KQKELLIKIQHLQQDCD 2167
Cdd:pfam05483 679 KAKAIADEAVKLQKEID 695
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1428-1852 |
2.08e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 53.23 E-value: 2.08e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1428 KRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIvaKHLETEEELKVAHCCLKEQEETINELRVNLSEKETEI 1507
Cdd:COG4717 71 KELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAEL--EELREELEKLEKLLQLLPLYQELEALEAELAELPERL 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1508 STIQKQLEAIND---KLQNKIQEIYEKEEQFNIKQISEVQEKVNELKQFKEhrkakdsALQSIESKMLELTNRLQESQEE 1584
Cdd:COG4717 149 EELEERLEELREleeELEELEAELAELQEELEELLEQLSLATEEELQDLAE-------ELEELQQRLAELEEELEEAQEE 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1585 IQIMIKEKEEMKRVQEALQIERdQLKENTK---------EIVAKMKESQEKEYQFLKMTAV----------------NET 1639
Cdd:COG4717 222 LEELEEELEQLENELEAAALEE-RLKEARLllliaaallALLGLGGSLLSLILTIAGVLFLvlgllallflllarekASL 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1640 QEKMCEIEHLKEQFETQKLNLENI-------ETENIRLTQILHENLEEMRSVTKERDDLRSvEETLKVERDQLKENLRET 1712
Cdd:COG4717 301 GKEAEELQALPALEELEEEELEELlaalglpPDLSPEELLELLDRIEELQELLREAEELEE-ELQLEELEQEIAALLAEA 379
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1713 ITRDLkiqEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQK-----DLENSNAKLQEKIQELKANEHQLITLKKDVN 1787
Cdd:COG4717 380 GVEDE---EELRAALEQAEEYQELKEELEELEEQLEELLGELEEllealDEEELEEELEELEEELEELEEELEELREELA 456
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 767930917 1788 ETQKKVSEMEqlkkqikdQSLTLSKLEIENLNLAQKLHENLEEMKSVMKERDNLRRVEETLKLER 1852
Cdd:COG4717 457 ELEAELEQLE--------EDGELAELLQELEELKAELRELAEEWAALKLALELLEEAREEYREER 513
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1159-1708 |
2.17e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 53.38 E-value: 2.17e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1159 EIENLKNELKNKELTLEHMET--ERLELAQKLNENYEEVKSITKERKVLKELQKSF-----ETERDHLRGYIREIEATGL 1231
Cdd:COG4913 226 AADALVEHFDDLERAHEALEDarEQIELLEPIRELAERYAAARERLAELEYLRAALrlwfaQRRLELLEAELEELRAELA 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1232 QTKEELKIAHIHLKEHQETIDELRRSVSEKTAQIINT-----QDLEKSHTKLQE------------EIPVLHEEQELLPN 1294
Cdd:COG4913 306 RLEAELERLEARLDALREELDELEAQIRGNGGDRLEQlereiERLERELEERERrrarleallaalGLPLPASAEEFAAL 385
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1295 VKEVSETQETMNELELLTEQsttkdstTLARIEMERLRLNEKFQESQEEIKSLTKERDNL--------KTIKEALEVKHD 1366
Cdd:COG4913 386 RAEAAALLEALEEELEALEE-------ALAEAEAALRDLRRELRELEAEIASLERRKSNIparllalrDALAEALGLDEA 458
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1367 QLK---EHIretlakiqesqskqeqslNMKEKDNE-------------TTKIVSEmEQFKpkdsALLRIeIEMLGLSKRL 1430
Cdd:COG4913 459 ELPfvgELI------------------EVRPEEERwrgaiervlggfaLTLLVPP-EHYA----AALRW-VNRLHLRGRL 514
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1431 --QESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHL-----ETEEELK----------------VAHCC-- 1485
Cdd:COG4913 515 vyERVRTGLPDPERPRLDPDSLAGKLDFKPHPFRAWLEAELGRRFdyvcvDSPEELRrhpraitragqvkgngTRHEKdd 594
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1486 ---LKEQ-------EETINELRVNLSEKETEISTIQKQLEAINDKLQN--KIQEIYEK--EEQFNIKQISEVQEKVNELK 1551
Cdd:COG4913 595 rrrIRSRyvlgfdnRAKLAALEAELAELEEELAEAEERLEALEAELDAlqERREALQRlaEYSWDEIDVASAEREIAELE 674
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1552 QFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAkmKESQEKEYQFL 1631
Cdd:COG4913 675 AELERLDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAED--LARLELRALLE 752
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 767930917 1632 KMTAVNETQEKMCEI-EHLKEQFETQKLNLENIETeniRLTQILHENLEEMRSVTKE-RDDLRSVEETLKvERDQLKEN 1708
Cdd:COG4913 753 ERFAAALGDAVERELrENLEERIDALRARLNRAEE---ELERAMRAFNREWPAETADlDADLESLPEYLA-LLDRLEED 827
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1645-1877 |
2.21e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 53.38 E-value: 2.21e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1645 EIEHLKEQFETqklnLENIETENIR-------LTQILhENLEEMRSVTKERDDLRSVEETLKVERDQLK----ENLRETI 1713
Cdd:COG4913 226 AADALVEHFDD----LERAHEALEDareqielLEPIR-ELAERYAAARERLAELEYLRAALRLWFAQRRlellEAELEEL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1714 TRDL-KIQEELRIAHMHLKEQQETIDKLRGIVSE-KTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDVNETQK 1791
Cdd:COG4913 301 RAELaRLEAELERLEARLDALREELDELEAQIRGnGGDRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAE 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1792 kvsEMEQLKKQIKDQSLTLSkleienlnlaqklhenlEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQQ 1871
Cdd:COG4913 381 ---EFAALRAEAAALLEALE-----------------EELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSNIPA 440
|
....*.
gi 767930917 1872 ELKTAR 1877
Cdd:COG4913 441 RLLALR 446
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1763-2061 |
2.79e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 53.00 E-value: 2.79e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1763 AKLQEKIQELKAnehqlitLKKDVNETQKKVSEMEQLKKQIKDQSLTLSKL------EIENLNLAQKLHENLEEMKSVMK 1836
Cdd:COG4913 610 AKLAALEAELAE-------LEEELAEAEERLEALEAELDALQERREALQRLaeyswdEIDVASAEREIAELEAELERLDA 682
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1837 ERDNLRRVE---ETLKLERDQLKESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISD---IQKDLDK 1910
Cdd:COG4913 683 SSDDLAALEeqlEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEerfAAALGDA 762
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1911 SKDELQKKIQELQKKELQLLRVKEDvnmshKKINEMEQLKKQF--EAQNLSMQSVRMDNFQltkKLHESLEEIRIVAKER 1988
Cdd:COG4913 763 VERELRENLEERIDALRARLNRAEE-----ELERAMRAFNREWpaETADLDADLESLPEYL---ALLDRLEEDGLPEYEE 834
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1989 DELRRIKESLKMERDQFIATLREMI--ARDR--------QNHQVKPEKRLLSDGQQHLTESLREKCSRIKELLKRYSEMD 2058
Cdd:COG4913 835 RFKELLNENSIEFVADLLSKLRRAIreIKERidplndslKRIPFGPGRYLRLEARPRPDPEVREFRQELRAVTSGASLFD 914
|
...
gi 767930917 2059 DHY 2061
Cdd:COG4913 915 EEL 917
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
1665-2008 |
3.48e-06 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 52.82 E-value: 3.48e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1665 TENIRLTQILHenLEEMRSVTKERDDLRSVEetlKVERDQLKENlRETITRDLKIQEELRIAHmhlKEQQETIDKLRGIV 1744
Cdd:pfam17380 266 TENEFLNQLLH--IVQHQKAVSERQQQEKFE---KMEQERLRQE-KEEKAREVERRRKLEEAE---KARQAEMDRQAAIY 336
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1745 SEKtDKLSnMQKDLENSNAKLQEKIQELKANEHQLITLK-KDVNETQKKVSEMEQLKKQIKDQSLTLSKLEIENLNLAQK 1823
Cdd:pfam17380 337 AEQ-ERMA-MERERELERIRQEERKRELERIRQEEIAMEiSRMRELERLQMERQQKNERVRQELEAARKVKILEEERQRK 414
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1824 LHENLEEMKSVMKERDNLRRvEETLKLERDQLKEsLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISD 1903
Cdd:pfam17380 415 IQQQKVEMEQIRAEQEEARQ-REVRRLEEERARE-MERVRLEEQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQ 492
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1904 IQKDLDKSKDELQKKIQELQKKELQLLRVKEDvnmSHKKINEMEQLKKQFEAQ--NLSMQSVRMDNFQLtKKLHESLEEI 1981
Cdd:pfam17380 493 RRKILEKELEERKQAMIEEERKRKLLEKEMEE---RQKAIYEEERRREAEEERrkQQEMEERRRIQEQM-RKATEERSRL 568
|
330 340
....*....|....*....|....*..
gi 767930917 1982 RIVAKERDELRRIKESLKMERDQFIAT 2008
Cdd:pfam17380 569 EAMEREREMMRQIVESEKARAEYEATT 595
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
1461-1723 |
3.71e-06 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 52.62 E-value: 3.71e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1461 LKENIKEIVAK-HleteeELKVAHCCLKEQEETINELRvNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQFNIKQ 1539
Cdd:PRK05771 14 LKSYKDEVLEAlH-----ELGVVHIEDLKEELSNERLR-KLRSLLTKLSEALDKLRSYLPKLNPLREEKKKVSVKSLEEL 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1540 ISEVQEKVNElkqfkehrkakdsalqsIESKMLELTNRLQESQEEIQIMIKEKEEMKRVqEALQIERDQLK--ENTKEIV 1617
Cdd:PRK05771 88 IKDVEEELEK-----------------IEKEIKELEEEISELENEIKELEQEIERLEPW-GNFDLDLSLLLgfKYVSVFV 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1618 AKMKESQEKEYQ----FLKMTAVNETQEKM-----CEIEHLKEQFET-QKLNLENIETENIR-LTQILHENLEEMRSVTK 1686
Cdd:PRK05771 150 GTVPEDKLEELKlesdVENVEYISTDKGYVyvvvvVLKELSDEVEEElKKLGFERLELEEEGtPSELIREIKEELEEIEK 229
|
250 260 270
....*....|....*....|....*....|....*..
gi 767930917 1687 ERDDLRSVEETLKVERDQLKENLRETITRDLKIQEEL 1723
Cdd:PRK05771 230 ERESLLEELKELAKKYLEELLALYEYLEIELERAEAL 266
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1757-2082 |
4.67e-06 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 52.37 E-value: 4.67e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1757 DLENSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQLKKQIKDQSLTLSKLEIENLNLAQKLHENLEEMKSVMK 1836
Cdd:PRK03918 159 DYENAYKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKE 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1837 ERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKTARMLSKEHKE---------TVDKLREKISEKTIQISDIQKD 1907
Cdd:PRK03918 239 EIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKElkekaeeyiKLSEFYEEYLDELREIEKRLSR 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1908 LDKSKDELQKKIQELQKKELQLLRVKEDVNMSHKKINEMEQLKKQFEaqnlsMQSVRMDNFQLTKKlHESLEEIRIVAKE 1987
Cdd:PRK03918 319 LEEEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHELYE-----EAKAKKEELERLKK-RLTGLTPEKLEKE 392
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1988 RDELRRIKESLKMERDQFIATLREMIARDRQNHQVKPE-----------KRLLSDgqQHLTESLREKCSRIKELLKRYSE 2056
Cdd:PRK03918 393 LEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEElkkakgkcpvcGRELTE--EHRKELLEEYTAELKRIEKELKE 470
|
330 340
....*....|....*....|....*.
gi 767930917 2057 MDDHYECLNRLSLDLEKEIEFQKELS 2082
Cdd:PRK03918 471 IEEKERKLRKELRELEKVLKKESELI 496
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
654-1627 |
4.85e-06 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 52.48 E-value: 4.85e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 654 KMKELATTYKQMENDIQLYQSQLEAKKKMQVDLEKELQSAFNEITKLTSLIDGKvpkdllcNLELEGKITDLQKELNKEV 733
Cdd:pfam01576 16 KVKERQQKAESELKELEKKHQQLCEEKNALQEQLQAETELCAEAEEMRARLAAR-------KQELEEILHELESRLEEEE 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 734 EENEALReevillselkslpSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYK 813
Cdd:pfam01576 89 ERSQQLQ-------------NEKKKMQQHIQDLEEQLDEEEAARQKLQLEKVTTEAKIKKLEEDILLLEDQNSKLSKERK 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 814 STDQEFQNFKTLHMDFEQKYKMVLE---ENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLnemE 890
Cdd:pfam01576 156 LLEERISEFTSNLAEEEEKAKSLSKlknKHEAMISDLEERLKKEEKGRQELEKAKRKLEGESTDLQEQIAELQAQI---A 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 891 QLKEQLENRDSTLQTVErekTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQ-----------------LKSDIH 953
Cdd:pfam01576 233 ELRAQLAKKEEELQAAL---ARLEEETAQKNNALKKIRELEAQISELQEDLESERAArnkaekqrrdlgeeleaLKTELE 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 954 DTVNMNIDTQE----------QLRNALES-LKQHQETINTLKSKISEEVsrnlhmeENTGETKDEFQQKMVGIDK-KQDL 1021
Cdd:pfam01576 310 DTLDTTAAQQElrskreqevtELKKALEEeTRSHEAQLQEMRQKHTQAL-------EELTEQLEQAKRNKANLEKaKQAL 382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1022 EAKNT------QTLTADVKDNEiiEQQRKIFSLIQE-----------KNELQQMLESVIAEKEQLKTDLKENIEMTIENQ 1084
Cdd:pfam01576 383 ESENAelqaelRTLQQAKQDSE--HKRKKLEGQLQElqarlseserqRAELAEKLSKLQSELESVSSLLNEAEGKNIKLS 460
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1085 EELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKIN------ 1158
Cdd:pfam01576 461 KDVSSLESQLQDTQELLQEETRQKLNLSTRLRQLEDERNSLQEQLEEEEEAKRNVERQLSTLQAQLSDMKKKLEedagtl 540
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1159 ------------EIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKERKVLKELQKSFET------------ 1214
Cdd:pfam01576 541 ealeegkkrlqrELEALTQQLEEKAAAYDKLEKTKNRLQQELDDLLVDLDHQRQLVSNLEKKQKKFDQmlaeekaisary 620
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1215 --ERDHLRGYIREIEATGLQTKEELKIAHIHLKEHQETIDELRRS----VSEKTAQIINTQDLEKSHTKLQEeipvlhee 1288
Cdd:pfam01576 621 aeERDRAEAEAREKETRALSLARALEEALEAKEELERTNKQLRAEmedlVSSKDDVGKNVHELERSKRALEQ-------- 692
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1289 qellpnvkEVSETQETMNELEllTEQSTTKDSTTLARIEMERLRLNEkfqesqeeiksltkERDnLKTIKEALEVKHDQL 1368
Cdd:pfam01576 693 --------QVEEMKTQLEELE--DELQATEDAKLRLEVNMQALKAQF--------------ERD-LQARDEQGEEKRRQL 747
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1369 KEHIRETLAKIQESQSKQEQSLNMKEkdnettKIVSEMEQFKPKDSALLRIEIEMLGLSKRLQEshdEMKSVAKEKDDLQ 1448
Cdd:pfam01576 748 VKQVRELEAELEDERKQRAQAVAAKK------KLELDLKELEAQIDAANKGREEAVKQLKKLQA---QMKDLQRELEEAR 818
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1449 RLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEI 1528
Cdd:pfam01576 819 ASRDEILAQSKESEKKLKNLEAELLQLQEDLAASERARRQAQQERDELADEIASGASGKSALQDEKRRLEARIAQLEEEL 898
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1529 yeKEEQFNIKQISEVQEKV--------NELKQFKEHRKAKDSALQSIESKMLELTNRLQEsqEEIQIMIKEKEEMKRVQE 1600
Cdd:pfam01576 899 --EEEQSNTELLNDRLRKStlqveqltTELAAERSTSQKSESARQQLERQNKELKAKLQE--MEGTVKSKFKSSIAALEA 974
|
1050 1060
....*....|....*....|....*..
gi 767930917 1601 ALQIERDQLKENTKEIVAKMKESQEKE 1627
Cdd:pfam01576 975 KIAQLEEQLEQESRERQAANKLVRRTE 1001
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1435-1629 |
5.26e-06 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 51.37 E-value: 5.26e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1435 DEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEElkvahccLKEQEETINELrvnlsekETEISTIQKQL 1514
Cdd:COG3883 16 PQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAE-------LEALQAEIDKL-------QAEIAEAEAEI 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1515 EAINDKLQNKIQEIYEKEEQFN--------------------IKQISE-VQEKVNELKQFKEHRKAKDSALQSIESKMLE 1573
Cdd:COG3883 82 EERREELGERARALYRSGGSVSyldvllgsesfsdfldrlsaLSKIADaDADLLEELKADKAELEAKKAELEAKLAELEA 161
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 767930917 1574 LTNRLQESQEEIQimiKEKEEMKRVQEALQIERDQLKENTKEIVAKMKESQEKEYQ 1629
Cdd:COG3883 162 LKAELEAAKAELE---AQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAA 214
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
1059-1991 |
5.84e-06 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 52.10 E-value: 5.84e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1059 LESVIAEKEQLKTDLKENIEMTIENQEELRLLGDELKKQQEIVAQeknhaikKEGELSRTCDRLAEVEEKLKEKSQQLQE 1138
Cdd:pfam01576 14 LQKVKERQQKAESELKELEKKHQQLCEEKNALQEQLQAETELCAE-------AEEMRARLAARKQELEEILHELESRLEE 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1139 KQQQLLNVQEEMSEMQKKINEIENlknELKNKELTLEHMETERLELAQKlnenyeeVKSITKERKVLKELQKSFETERDH 1218
Cdd:pfam01576 87 EEERSQQLQNEKKKMQQHIQDLEE---QLDEEEAARQKLQLEKVTTEAK-------IKKLEEDILLLEDQNSKLSKERKL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1219 LRGYIREIEATGLQTKEELKIAHIHLKEHQETIDEL--RRSVSEKTaqiinTQDLEKSHTKLQEEIPVLHEEQELLPNVK 1296
Cdd:pfam01576 157 LEERISEFTSNLAEEEEKAKSLSKLKNKHEAMISDLeeRLKKEEKG-----RQELEKAKRKLEGESTDLQEQIAELQAQI 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1297 EVSETQETMNELELLTEQSTTKDSTTLARIEMERLR-LNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRET 1375
Cdd:pfam01576 232 AELRAQLAKKEEELQAALARLEEETAQKNNALKKIReLEAQISELQEDLESERAARNKAEKQRRDLGEELEALKTELEDT 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1376 L---AKIQESQSKQEQSLNMKEK--DNETTKIVSEMEQFKPKDSALLRIEIEMLGLSKRLQESHDEMK-SVAKEKDDLQ- 1448
Cdd:pfam01576 312 LdttAAQQELRSKREQEVTELKKalEEETRSHEAQLQEMRQKHTQALEELTEQLEQAKRNKANLEKAKqALESENAELQa 391
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1449 RLQEVLQSESD------QLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQ 1522
Cdd:pfam01576 392 ELRTLQQAKQDsehkrkKLEGQLQELQARLSESERQRAELAEKLSKLQSELESVSSLLNEAEGKNIKLSKDVSSLESQLQ 471
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1523 NkIQEIYEKEEQFNIKQISEvqekvneLKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEAL 1602
Cdd:pfam01576 472 D-TQELLQEETRQKLNLSTR-------LRQLEDERNSLQEQLEEEEEAKRNVERQLSTLQAQLSDMKKKLEEDAGTLEAL 543
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1603 QIERDQLKentKEIVAKMKESQEKEYQFLKMTAVNETQEKmcEIEHLKEQFETQKLNLENIETENIRLTQILHENleemr 1682
Cdd:pfam01576 544 EEGKKRLQ---RELEALTQQLEEKAAAYDKLEKTKNRLQQ--ELDDLLVDLDHQRQLVSNLEKKQKKFDQMLAEE----- 613
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1683 svtkerddlRSVEETLKVERDQLKENLRETITRDLKIQEELriahmhlKEQQETIDKLrgivsEKTDKLsnmqkdlensn 1762
Cdd:pfam01576 614 ---------KAISARYAEERDRAEAEAREKETRALSLARAL-------EEALEAKEEL-----ERTNKQ----------- 661
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1763 aklqekiqeLKANEHQLITLKKDVNetqKKVSEMEQLKKQIKDQsltlskleienlnlaqklhenLEEMKSVMKERDNLR 1842
Cdd:pfam01576 662 ---------LRAEMEDLVSSKDDVG---KNVHELERSKRALEQQ---------------------VEEMKTQLEELEDEL 708
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1843 RVEETLKLERDQLKESLQETKARDLEIQQEL--KTARMLSKEHKETVDKLREKISEKTIQISDIQK-------------D 1907
Cdd:pfam01576 709 QATEDAKLRLEVNMQALKAQFERDLQARDEQgeEKRRQLVKQVRELEAELEDERKQRAQAVAAKKKleldlkeleaqidA 788
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1908 LDKSKDELQKKIQELQKKELQLLRVKEDVNMSHKKI----NEMEQLKKQFEAQNLsmqsvrmdnfQLTKKLHESLEEIRI 1983
Cdd:pfam01576 789 ANKGREEAVKQLKKLQAQMKDLQRELEEARASRDEIlaqsKESEKKLKNLEAELL----------QLQEDLAASERARRQ 858
|
....*...
gi 767930917 1984 VAKERDEL 1991
Cdd:pfam01576 859 AQQERDEL 866
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1851-2082 |
6.72e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.92 E-value: 6.72e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1851 ERDQLKESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKDLDKSKDELQKKIQELQKKELQLL 1930
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1931 RVKEDVNM---SHKKINEMEQLKKQFEAQNLSMQSVRMDNFQ-LTKKLHESLEEIRivaKERDELRRIKESLKMERDQFI 2006
Cdd:COG4942 101 AQKEELAEllrALYRLGRQPPLALLLSPEDFLDAVRRLQYLKyLAPARREQAEELR---ADLAELAALRAELEAERAELE 177
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 767930917 2007 ATLREMIARDRQNHQVKPEKRLLsdgQQHLTESLREKCSRIKELLKRYSEmddhyecLNRLSLDLEKEIEFQKELS 2082
Cdd:COG4942 178 ALLAELEEERAALEALKAERQKL---LARLEKELAELAAELAELQQEAEE-------LEALIARLEAEAAAAAERT 243
|
|
| PTZ00440 |
PTZ00440 |
reticulocyte binding protein 2-like protein; Provisional |
450-1561 |
7.18e-06 |
|
reticulocyte binding protein 2-like protein; Provisional
Pssm-ID: 240419 [Multi-domain] Cd Length: 2722 Bit Score: 52.14 E-value: 7.18e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 450 THKLSINLLREIDESVCSESDVFSNTLDTLSEIEWNPATKLLNQENIESELNSLRADYDNLVLDYEQLRTEKEEMELKLK 529
Cdd:PTZ00440 355 SFKFSLEMLSMLDSLLIKKEKILNNLFNKLFGDLKEKIETLLDSEYFISKYTNIISLSEHTLKAAEDVLKENSQKIADYA 434
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 530 EKNDLdefEALERKTKKDQEM----QLIHEISNLKNLVKHAEVYNQDLENELSSKVELLREKEDQIKKLQEYIdsQKLEN 605
Cdd:PTZ00440 435 LYSNL---EIIEIKKKYDEKInelkKSINQLKTLISIMKSFYDLIISEKDSMDSKEKKESSDSNYQEKVDELL--QIINS 509
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 606 IKMDLSYSLESIEDPKQMKQTLFDAETVALDAKRESAFLRSENLELKEKMKELATTYKQMENDIQLYQSQLEAKKKMqVD 685
Cdd:PTZ00440 510 IKEKNNIVNNNFKNIEDYYITIEGLKNEIEGLIELIKYYLQSIETLIKDEKLKRSMKNDIKNKIKYIEENVDHIKDI-IS 588
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 686 LEKELQSAFNEITKLTSLI------------DGKVPKDLLCNLELEGKITDLQKELNKEVEENEALREE-------VILL 746
Cdd:PTZ00440 589 LNDEIDNIIQQIEELINEAlfnkekfineknDLQEKVKYILNKFYKGDLQELLDELSHFLDDHKYLYHEakskedlQTLL 668
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 747 SELKSLPSEVERLRKEIQD------KSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEFQ 820
Cdd:PTZ00440 669 NTSKNEYEKLEFMKSDNIDniiknlKKELQNLLSLKENIIKKQLNNIEQDISNSLNQYTIKYNDLKSSIEEYKEEEEKLE 748
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 821 NFKTLHMDFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRd 900
Cdd:PTZ00440 749 VYKHQIINRKNEFILHLYENDKDLPDGKNTYEEFLQYKDTILNKENKISNDINILKENKKNNQDLLNSYNILIQKLEAH- 827
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 901 stlqtVEREKTLITEKLQQTLEEVKTLTQEKDDlKQLQESLQIERDQLKsDIhDTVNMNIDTQEQLRNALESLKQHQETI 980
Cdd:PTZ00440 828 -----TEKNDEELKQLLQKFPTEDENLNLKELE-KEFNENNQIVDNIIK-DI-ENMNKNINIIKTLNIAINRSNSNKQLV 899
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 981 NTLKskiseevsrnlhmeENTGETKDEFQQKMVGIDKKQDLEAKNTQTLTADV-KDNEIIEQQRKIFSLIQEKNELQQML 1059
Cdd:PTZ00440 900 EHLL--------------NNKIDLKNKLEQHMKIINTDNIIQKNEKLNLLNNLnKEKEKIEKQLSDTKINNLKMQIEKTL 965
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1060 ESVIAEKEQLKTDLKENIEMTIENQEELRLLGDEL-------------------KKQQEIVAQEKNHAIKKEGELSRTCD 1120
Cdd:PTZ00440 966 EYYDKSKENINGNDGTHLEKLDKEKDEWEHFKSEIdklnvnynilnkkiddlikKQHDDIIELIDKLIKEKGKEIEEKVD 1045
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1121 R----LAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKI-----------NEIENLKNEL--------KNKELTLEHM 1177
Cdd:PTZ00440 1046 QyislLEKMKTKLSSFHFNIDIKKYKNPKIKEEIKLLEEKVeallkkidenkNKLIEIKNKShehvvnadKEKNKQTEHY 1125
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1178 ETERLELA---QKLNENYEEVKSITKERKVLKELQksfETERDHLRGYIREIEATGLQTKEELKIAHIHLKEHQETIDEL 1254
Cdd:PTZ00440 1126 NKKKKSLEkiyKQMEKTLKELENMNLEDITLNEVN---EIEIEYERILIDHIVEQINNEAKKSKTIMEEIESYKKDIDQV 1202
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1255 RRSVSEKTAQIINT----------QDLEKSHTKLQEEIPVLHEEQELLPNVKEVSETQETMNELELLTEQSTTKDSTTLA 1324
Cdd:PTZ00440 1203 KKNMSKERNDHLTTfeynayydkaTASYENIEELTTEAKGLKGEANRSTNVDELKEIKLQVFSYLQQVIKENNKMENALH 1282
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1325 RIE-MERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQSLNMKEKDNETTKIV 1403
Cdd:PTZ00440 1283 EIKnMYEFLISIDSEKILKEILNSTKKAEEFSNDAKKELEKTDNLIKQVEAKIEQAKEHKNKIYGSLEDKQIDDEIKKIE 1362
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1404 SEMEQFKPKDSAllrIEIEMLGLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKE----NIKEIVAKHLETEEEL 1479
Cdd:PTZ00440 1363 QIKEEISNKRKE---INKYLSNIKSNKEKCDLHVRNASRGKDKIDFLNKHEAIEPSNSKEvniiKITDNINKCKQYSNEA 1439
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1480 KVAHCCLKEQEETINELRVNLSE--KETEISTIQKQLEAINDKLQNKIQEIyeKEEQFNIKQISEV-QEKVNELKQFKEH 1556
Cdd:PTZ00440 1440 METENKADENNDSIIKYEKEITNilNNSSILGKKTKLEKKKKEATNIMDDI--NGEHSIIKTKLTKsSEKLNQLNEQPNI 1517
|
....*
gi 767930917 1557 RKAKD 1561
Cdd:PTZ00440 1518 KREGD 1522
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
1079-1807 |
7.23e-06 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 51.89 E-value: 7.23e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1079 MTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTC-DRLAEVEEKLKEKSQQLQEKQQQLLnVQEEMSEMQKKI 1157
Cdd:TIGR00618 184 MEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLeKELKHLREALQQTQQSHAYLTQKRE-AQEEQLKKQQLL 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1158 NEIENLKNELKNKELTLEHMEtERLELAQKLNENYEEVKSITKERKVLKELQKSFEtERDHLRGYIREIEATGLQTKEEL 1237
Cdd:TIGR00618 263 KQLRARIEELRAQEAVLEETQ-ERINRARKAAPLAAHIKAVTQIEQQAQRIHTELQ-SKMRSRAKLLMKRAAHVKQQSSI 340
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1238 KIAHIHLKEHQETIDELRRSVSEKTA--QIINTQDLEKSHTKLQEEIPVLHEEQELLPNVKEVSETQETMNELELLTEQS 1315
Cdd:TIGR00618 341 EEQRRLLQTLHSQEIHIRDAHEVATSirEISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKELDILQREQATIDTRTSAFR 420
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1316 TTKDSTTLAR--IEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKE----HIRETLAKIQESQSKQEQS 1389
Cdd:TIGR00618 421 DLQGQLAHAKkqQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEREQQLQTkeqiHLQETRKKAVVLARLLELQ 500
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1390 LNMKEKDNETTKIVSEMEQFkpkdsallrieIEMLGLSKRLQESHDEMKSVAKEkddLQRLQEVLQSESDQLKEnikeiv 1469
Cdd:TIGR00618 501 EEPCPLCGSCIHPNPARQDI-----------DNPGPLTRRMQRGEQTYAQLETS---EEDVYHQLTSERKQRAS------ 560
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1470 akhleteeelkvahccLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQF---NIKQISEVQEK 1546
Cdd:TIGR00618 561 ----------------LKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLaceQHALLRKLQPE 624
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1547 VNELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQlkeNTKEIVAKMKESQEK 1626
Cdd:TIGR00618 625 QDLQDVRLHLQQCSQELALKLTALHALQLTLTQERVREHALSIRVLPKELLASRQLALQKMQ---SEKEQLTYWKEMLAQ 701
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1627 eyqflKMTAVNETQEKMCEIEHLKEQFETQKLNL-ENIETENIRLTQILHENLEEMRSVTKER---DDLRSVEETLKVER 1702
Cdd:TIGR00618 702 -----CQTLLRELETHIEEYDREFNEIENASSSLgSDLAAREDALNQSLKELMHQARTVLKARteaHFNNNEEVTAALQT 776
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1703 DQLKENLRETITRDLKIQEELRIAHMHLKEQQETIDKLRGIVSEKTDKLsnMQKDLENsnakLQEKIQELKANEHQLITL 1782
Cdd:TIGR00618 777 GAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCET--LVQEEEQ----FLSRLEEKSATLGEITHQ 850
|
730 740
....*....|....*....|....*
gi 767930917 1783 KKDVNETQKKVSEMEQLKKQIKDQS 1807
Cdd:TIGR00618 851 LLKYEECSKQLAQLTQEQAKIIQLS 875
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
1510-1814 |
7.65e-06 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 51.66 E-value: 7.65e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1510 IQKQLEAINDKLQnkiQEIYEKEEQFNIKQisEVQEKVNEL---KQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQ 1586
Cdd:pfam17380 277 IVQHQKAVSERQQ---QEKFEKMEQERLRQ--EKEEKAREVerrRKLEEAEKARQAEMDRQAAIYAEQERMAMERERELE 351
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1587 IMIKE--KEEMKRV-QEALQIERDQLKEnTKEIVAKMKESQEKEYQFLKMTAVNETQEkmceiEHLKEQFETQKLNLENI 1663
Cdd:pfam17380 352 RIRQEerKRELERIrQEEIAMEISRMRE-LERLQMERQQKNERVRQELEAARKVKILE-----EERQRKIQQQKVEMEQI 425
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1664 ETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVE--RDQLKENLRETITRDLKIQEELRIAHMHLKEQQETIDKLR 1741
Cdd:pfam17380 426 RAEQEEARQREVRRLEEERAREMERVRLEEQERQQQVErlRQQEEERKRKKLELEKEKRDRKRAEEQRRKILEKELEERK 505
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 767930917 1742 GIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQlitlkkdvnETQKKVSEMEQLKKQIKDQSLTLSKLE 1814
Cdd:pfam17380 506 QAMIEEERKRKLLEKEMEERQKAIYEEERRREAEEER---------RKQQEMEERRRIQEQMRKATEERSRLE 569
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1329-1549 |
7.93e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.92 E-value: 7.93e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1329 ERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSK-QEQSLNMKEKDNETTKIVSEME 1407
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQElAALEAELAELEKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1408 QFKPKDSALLRiEIEMLGLSKRLQE--SHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCC 1485
Cdd:COG4942 101 AQKEELAELLR-ALYRLGRQPPLALllSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEAL 179
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 767930917 1486 LKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEiyEKEEQFNIKQISEVQEKVNE 1549
Cdd:COG4942 180 LAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQE--AEELEALIARLEAEAAAAAE 241
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
1016-1527 |
8.29e-06 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 51.45 E-value: 8.29e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1016 DKKQDLEAKNTQTL-TADVKdneiieqqrkifSLIQEKNELQQMLES---VIAEKEQLKTDLKENIEMTIENQEELrllg 1091
Cdd:PRK11281 40 DVQAQLDALNKQKLlEAEDK------------LVQQDLEQTLALLDKidrQKEETEQLKQQLAQAPAKLRQAQAEL---- 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1092 DELKKQQEIVAQE--KNHAIKK-EGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELK 1168
Cdd:PRK11281 104 EALKDDNDEETREtlSTLSLRQlESRLAQTLDQLQNAQNDLAEYNSQLVSLQTQPERAQAALYANSQRLQQIRNLLKGGK 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1169 NKELTLEHMETERLELAQKLNEnyeevKSITKERKVLK---ELQKSFETERDHLRGYIREIEAtglqtkeelkiahiHLK 1245
Cdd:PRK11281 184 VGGKALRPSQRVLLQAEQALLN-----AQNDLQRKSLEgntQLQDLLQKQRDYLTARIQRLEH--------------QLQ 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1246 EHQETIDELRRSVSEKTA-QIINTQDLEKSHTKlqeeiPVLHEEQELlpNVKeVSEtqetmnelELLteQSTTkdsttla 1324
Cdd:PRK11281 245 LLQEAINSKRLTLSEKTVqEAQSQDEAARIQAN-----PLVAQELEI--NLQ-LSQ--------RLL--KATE------- 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1325 riemerlRLNEKFQESQEeikslTKER-DNL----KTIKEALEVKHDQLkehireTLAKIqesQSKQEQSLnmkekdnET 1399
Cdd:PRK11281 300 -------KLNTLTQQNLR-----VKNWlDRLtqseRNIKEQISVLKGSL------LLSRI---LYQQQQAL-------PS 351
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1400 TKIVSEMeqfkPKDSALLRIEIemlglsKRLQESHDEMKSVAKEKDDLQRLQEvlQSESDQLKENIKEIvakhLETEEEL 1479
Cdd:PRK11281 352 ADLIEGL----ADRIADLRLEQ------FEINQQRDALFQPDAYIDKLEAGHK--SEVTDEVRDALLQL----LDERREL 415
|
490 500 510 520
....*....|....*....|....*....|....*....|....*....
gi 767930917 1480 kvahcclkeQEETINELRVNLSEKET-EIStiQKQLEAINDKLQNKIQE 1527
Cdd:PRK11281 416 ---------LDQLNKQLNNQLNLAINlQLN--QQQLLSVSDSLQSTLTQ 453
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1764-1925 |
8.34e-06 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 49.54 E-value: 8.34e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1764 KLQEKIQELKANEHQLITLKKDVNETQKKV----SEMEQLKKQIKDQSLTLSKLEIENLNLAQKLHENLEEMKSVM--KE 1837
Cdd:COG1579 11 DLQELDSELDRLEHRLKELPAELAELEDELaaleARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRnnKE 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1838 RDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKTArmlskehKETVDKLREKISEKTIQISDIQKDLDKSKDELQK 1917
Cdd:COG1579 91 YEALQKEIESLKRRISDLEDEILELMERIEELEEELAEL-------EAELAELEAELEEKKAELDEELAELEAELEELEA 163
|
....*...
gi 767930917 1918 KIQELQKK 1925
Cdd:COG1579 164 EREELAAK 171
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1522-1794 |
8.80e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.53 E-value: 8.80e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1522 QNKIQEIYEKEEQFNIKQISEVQEKVNELKQfkeHRKAKDSALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEA 1601
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKK---EEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAE 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1602 LQIERDQLKENTKEIVAKM-KESQEKEYQFLkmtavnetqekmceiehlkeqfetqkLNLENIETENIRLT---QILHEN 1677
Cdd:COG4942 95 LRAELEAQKEELAELLRALyRLGRQPPLALL--------------------------LSPEDFLDAVRRLQylkYLAPAR 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1678 LEEMRSVTKERDDLRSVEETLKVERDQLKENLretitrdlkiqeelriahmhlKEQQETIDKLRGIVSEKTDKLSNMQKD 1757
Cdd:COG4942 149 REQAEELRADLAELAALRAELEAERAELEALL---------------------AELEEERAALEALKAERQKLLARLEKE 207
|
250 260 270
....*....|....*....|....*....|....*..
gi 767930917 1758 LENSNAKLQEKIQELKANEHQLITLKKDVNETQKKVS 1794
Cdd:COG4942 208 LAELAAELAELQQEAEELEALIARLEAEAAAAAERTP 244
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1003-1603 |
9.03e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 51.45 E-value: 9.03e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1003 ETKDEFQQKM---VGIDKKQDLE-------AKNTQTLTADVKDN-----EIIEQQRKIFSLIQEKNELQQMLESVIAEKE 1067
Cdd:COG4913 173 DSFSAYLARLrrrLGIGSEKALRllhktqsFKPIGDLDDFVREYmleepDTFEAADALVEHFDDLERAHEALEDAREQIE 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1068 QLkTDLKENIEMTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRtcDRLAEVEEKLKEKSQQLQEKQQQLLNVQ 1147
Cdd:COG4913 253 LL-EPIRELAERYAAARERLAELEYLRAALRLWFAQRRLELLEAELEELR--AELARLEAELERLEARLDALREELDELE 329
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1148 EEMSemQKKINEIENLKNELKNKELTLEHMETERLELAQKLN----ENYEEVKSITKERKVLKELQKSFETERDHLRGYI 1223
Cdd:COG4913 330 AQIR--GNGGDRLEQLEREIERLERELEERERRRARLEALLAalglPLPASAEEFAALRAEAAALLEALEEELEALEEAL 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1224 REIEATGLQTKEElkiahihLKEHQETIDELRRSVSEKTAQIINTQDLEKSHTKL-QEEIPVLHEEQELLPN-------- 1294
Cdd:COG4913 408 AEAEAALRDLRRE-------LRELEAEIASLERRKSNIPARLLALRDALAEALGLdEAELPFVGELIEVRPEeerwrgai 480
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1295 --------------------------------------VKEVSETQETMNELE-LLTEQSTTKDSTTLARIEMErlrLNE 1335
Cdd:COG4913 481 ervlggfaltllvppehyaaalrwvnrlhlrgrlvyerVRTGLPDPERPRLDPdSLAGKLDFKPHPFRAWLEAE---LGR 557
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1336 KFQ----ESQEEI----KSLTKE-------------------------RDNLKTIkEALEVKHDQLKEHIRETLAKIQES 1382
Cdd:COG4913 558 RFDyvcvDSPEELrrhpRAITRAgqvkgngtrhekddrrrirsryvlgFDNRAKL-AALEAELAELEEELAEAEERLEAL 636
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1383 QSKQEQslnMKEKDNETTKIvsEMEQFKPKDSALLRIEIEMLGLSK-RLQESHDEMKSVAKEKDDLQRLQEVLQSESDQL 1461
Cdd:COG4913 637 EAELDA---LQERREALQRL--AEYSWDEIDVASAEREIAELEAELeRLDASSDDLAALEEQLEELEAELEELEEELDEL 711
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1462 KENIKEIVAKHLETEEELKVAHCCLKEQEETINEL----------RVNLSEKETEIS-TIQKQLEAINDKLQNKIQEIYE 1530
Cdd:COG4913 712 KGEIGRLEKELEQAEEELDELQDRLEAAEDLARLElralleerfaAALGDAVERELReNLEERIDALRARLNRAEEELER 791
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1531 KEEQFNIKQISEVQE------------------KVNELKQFKEhrKAKDSALQSIESKMLELTNRLQESQEEIqimikeK 1592
Cdd:COG4913 792 AMRAFNREWPAETADldadleslpeylalldrlEEDGLPEYEE--RFKELLNENSIEFVADLLSKLRRAIREI------K 863
|
730
....*....|.
gi 767930917 1593 EEMKRVQEALQ 1603
Cdd:COG4913 864 ERIDPLNDSLK 874
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
719-923 |
1.02e-05 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 50.60 E-value: 1.02e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 719 EGKITDLQKELNKEVEENEALREEvillseLKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEI 798
Cdd:COG3883 15 DPQIQAKQKELSELQAELEAAQAE------LDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREEL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 799 GKTKDDLATTQSNYKSTDQEF--QNFKtlhmDFEQKYKMVLEENERmNQEIVNLSKEAQKfdsSLGALKTELSYKTQELQ 876
Cdd:COG3883 89 GERARALYRSGGSVSYLDVLLgsESFS----DFLDRLSALSKIADA-DADLLEELKADKA---ELEAKKAELEAKLAELE 160
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 767930917 877 EKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEE 923
Cdd:COG3883 161 ALKAELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAA 207
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
1677-2184 |
1.24e-05 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 51.23 E-value: 1.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1677 NLEEMRSVTKERDDLRSVEETLkverdqlkENLRETITRDLKIQEELRIAHMHLKEqqETIDKLrgivsEKTDKLSNMQK 1756
Cdd:COG5022 798 KLQPLLSLLGSRKEYRSYLACI--------IKLQKTIKREKKLRETEEVEFSLKAE--VLIQKF-----GRSLKAKKRFS 862
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1757 DLENSNAKLQEKiQELKANEHQLITLKKDVNETQKKVSEMEQLKKQIKDQSLTLSKLEIENLNLaqkLHENLEEMKSVMK 1836
Cdd:COG5022 863 LLKKETIYLQSA-QRVELAERQLQELKIDVKSISSLKLVNLELESEIIELKKSLSSDLIENLEF---KTELIARLKKLLN 938
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1837 ERDNlrRVEETLKLERDQLKESLQETKARdleIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKdLDKSKDELQ 1916
Cdd:COG5022 939 NIDL--EEGPSIEYVKLPELNKLHEVESK---LKETSEEYEDLLKKSTILVREGNKANSELKNFKKELAE-LSKQYGALQ 1012
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1917 KKIQELQKKELQLLRVKEDvnmSHKKINEMEQLKKQFEAQNLSmqsvrmdnFQLTKKLHESLEEIRIVAKERDELRRIKE 1996
Cdd:COG5022 1013 ESTKQLKELPVEVAELQSA---SKIISSESTELSILKPLQKLK--------GLLLLENNQLQARYKALKLRRENSLLDDK 1081
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1997 SLKMERDQFIaTLREMiardrqnhqvkPEKRLLSDGQQHLteSLREKCSRIKELLKRYSEMDDHYECLNRLSLDLEKEIE 2076
Cdd:COG5022 1082 QLYQLESTEN-LLKTI-----------NVKDLEVTNRNLV--KPANVLQFIVAQMIKLNLLQEISKFLSQLVNTLEPVFQ 1147
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2077 FQKELSMRVKANLSLPYLQTKHIEKLFtANQRCSMEFHRIMKKLKYVLSyvtkikeeqHESINKFEMDFIDEVEKQKELL 2156
Cdd:COG5022 1148 KLSVLQLELDGLFWEANLEALPSPPPF-AALSEKRLYQSALYDEKSKLS---------SSEVNDLKNELIALFSKIFSGW 1217
|
490 500 510
....*....|....*....|....*....|.
gi 767930917 2157 ---IKIQHLQQDCDVPSRELRDLKLNQNMDL 2184
Cdd:COG5022 1218 prgDKLKKLISEGWVPTEYSTSLKGFNNLNK 1248
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1795-2016 |
1.29e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 51.07 E-value: 1.29e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1795 EMEQLKKQIKdqslTLSKLEienlnlaqKLHENLEEMKSvmkERDNLRRVEETLKLERDQLKESLQETKARDLE-----I 1869
Cdd:COG4913 243 ALEDAREQIE----LLEPIR--------ELAERYAAARE---RLAELEYLRAALRLWFAQRRLELLEAELEELRaelarL 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1870 QQELKTARMLSKEHKETVDKLREKISE-KTIQISDIQKDLDKSKDELQKKIQELQKKELQLLRVKEDVNMSHKKINEM-E 1947
Cdd:COG4913 308 EAELERLEARLDALREELDELEAQIRGnGGDRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALrA 387
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 767930917 1948 QLKKQFEAQNLSMQSVRMDNFQLTKKLHESLEEIRIVAKERDELRRIKESLkmerDQFIATLREMIARD 2016
Cdd:COG4913 388 EAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSNI----PARLLALRDALAEA 452
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
1085-1236 |
1.37e-05 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 50.55 E-value: 1.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1085 EELRLLGDELKKQQEIVAQEKNHAIKKEGElsrtcdrlAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLK 1164
Cdd:PRK12704 45 EEAKKEAEAIKKEALLEAKEEIHKLRNEFE--------KELRERRNELQKLEKRLLQKEENLDRKLELLEKREEELEKKE 116
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 767930917 1165 NELKNKELTLEHMETERLELAQKLNENYEEVKSITKE---RKVLKELQKSFETERDHlrgYIREIEAtglQTKEE 1236
Cdd:PRK12704 117 KELEQKQQELEKKEEELEELIEEQLQELERISGLTAEeakEILLEKVEEEARHEAAV---LIKEIEE---EAKEE 185
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1678-2520 |
1.37e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 50.84 E-value: 1.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1678 LEEMRSVTKERDDLRSVEETLKVERDQLKENlRETITRDLKIQEELR--IAHMHLKEQQETIDKLRGIVSEKTDklsnmq 1755
Cdd:TIGR02169 176 LEELEEVEENIERLDLIIDEKRQQLERLRRE-REKAERYQALLKEKReyEGYELLKEKEALERQKEAIERQLAS------ 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1756 kdLENSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQLKKQIKDQSLT---------LSKLEIENLNLAQKLHE 1826
Cdd:TIGR02169 249 --LEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKEKIGELEaeiaslersIAEKERELEDAEERLAK 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1827 NLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQK 1906
Cdd:TIGR02169 327 LEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKR 406
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1907 DLDKSKDELQKKIQELQKKELQLLRVKEDVNmshKKINEMEQLKKQFEAQNLSMQSVRMDnfqltkklhesleeiriVAK 1986
Cdd:TIGR02169 407 ELDRLQEELQRLSEELADLNAAIAGIEAKIN---ELEEEKEDKALEIKKQEWKLEQLAAD-----------------LSK 466
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1987 ERDELRRIKESLKMERDQFIATLREMIARDRQNHQVKPEKRLLSDGQQHLTESLREKCSRIKELLKRYSEMDDHYECL-- 2064
Cdd:TIGR02169 467 YEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQLGSVGERYATAIEVAag 546
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2065 NRLS-------LDLEKEIEFQKELSMRVKANLSLPYLQTKHIEKLFTANQRCsmefhrimkkLKYVLSYVTKikEEQHES 2137
Cdd:TIGR02169 547 NRLNnvvveddAVAKEAIELLKRRKAGRATFLPLNKMRDERRDLSILSEDGV----------IGFAVDLVEF--DPKYEP 614
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2138 INKFEMD---FIDEVEKQKELLIKIQHLQQDCDV---------PSRELRDLKLNQnmdlhieeilkdfsesefPSIKTEF 2205
Cdd:TIGR02169 615 AFKYVFGdtlVVEDIEAARRLMGKYRMVTLEGELfeksgamtgGSRAPRGGILFS------------------RSEPAEL 676
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2206 QQVLSNRKEMtqfleewlntrfdiEKLKNGIQKENDRIcqvnnffNNRIIAIMNESTEFEERSATISKEWEQdlksLKEK 2285
Cdd:TIGR02169 677 QRLRERLEGL--------------KRELSSLQSELRRI-------ENRLDELSQELSDASRKIGEIEKEIEQ----LEQE 731
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2286 NEKLFKNYQTLKTSLASgAQVNPTTQDNKNPHVTSRATQLTtEKIRELENSLHEAKesAMHKESKIIKMQKELEVTNDII 2365
Cdd:TIGR02169 732 EEKLKERLEELEEDLSS-LEQEIENVKSELKELEARIEELE-EDLHKLEEALNDLE--ARLSHSRIPEIQAELSKLEEEV 807
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2366 AKLQAKVHESNKCLEKTKETIQVLQDkvalgakpykeEIEDLKMKLVKIDLEKmknaKEFEKEISATKATVEYQKEVIRL 2445
Cdd:TIGR02169 808 SRIEARLREIEQKLNRLTLEKEYLEK-----------EIQELQEQRIDLKEQI----KSIEKEIENLNGKKEELEEELEE 872
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 767930917 2446 LRENLRRsqqaqdtsvisehtdpqpsnkpltcgggsgivqntkaliLKSEHIRLEKEISKLKQQNEQLIKQKNEL 2520
Cdd:TIGR02169 873 LEAALRD---------------------------------------LESRLGDLKKERDELEAQLRELERKIEEL 908
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
495-1096 |
1.45e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 50.68 E-value: 1.45e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 495 NIESELNSLRADYDNLVLDYEQLRTEKEEMEL----------KLKEKNDLDEFEALERKTKKDQEMQLIHEISNLKNLVK 564
Cdd:COG4913 222 DTFEAADALVEHFDDLERAHEALEDAREQIELlepirelaerYAAARERLAELEYLRAALRLWFAQRRLELLEAELEELR 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 565 HAEVYNQDLENELSSKVELLREKEDQIKKLQEYIDSQKLENIKMDLSySLESIEDPKQMKQTLFDAETVALDAKRESAfl 644
Cdd:COG4913 302 AELARLEAELERLEARLDALREELDELEAQIRGNGGDRLEQLEREIE-RLERELEERERRRARLEALLAALGLPLPAS-- 378
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 645 RSENLELKEKMKELATTYKQMENDIQLYQSQLEAKKKmqvDLEKELQSAFNEITKLT---SLIDGKVP--KDLLCNlELE 719
Cdd:COG4913 379 AEEFAALRAEAAALLEALEEELEALEEALAEAEAALR---DLRRELRELEAEIASLErrkSNIPARLLalRDALAE-ALG 454
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 720 GKITDLQ--KELnKEVEENEALREEVI----------LLSELKSLP---SEVERLRKE-------IQDKSEELHIITSEK 777
Cdd:COG4913 455 LDEAELPfvGEL-IEVRPEEERWRGAIervlggfaltLLVPPEHYAaalRWVNRLHLRgrlvyerVRTGLPDPERPRLDP 533
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 778 DKLFSEVVHKESRVQGLLE-EIGKTKDDLATTqsnyksTDQEFQNF-------------KTLH-MDF------------- 829
Cdd:COG4913 534 DSLAGKLDFKPHPFRAWLEaELGRRFDYVCVD------SPEELRRHpraitragqvkgnGTRHeKDDrrrirsryvlgfd 607
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 830 -EQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELS-----YKTQELQEKTREVQERLNEMEQLKEQLENRDSTL 903
Cdd:COG4913 608 nRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREalqrlAEYSWDEIDVASAEREIAELEAELERLDASSDDL 687
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 904 QTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIHDTVNM--------------NIDTQEQLRNA 969
Cdd:COG4913 688 AALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLarlelralleerfaAALGDAVEREL 767
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 970 LESLKQHQETINTLKSKISEEVSRnlHMEENTGETKDEFQQKMVGIDKKQDLEAKNTQtltadVKDNEIIEQQRKIFSLI 1049
Cdd:COG4913 768 RENLEERIDALRARLNRAEEELER--AMRAFNREWPAETADLDADLESLPEYLALLDR-----LEEDGLPEYEERFKELL 840
|
650 660 670 680
....*....|....*....|....*....|....*....|....*..
gi 767930917 1050 QEKNelqqmlesvIAEKEQLKTDLKENIEmTIEnqEELRLLGDELKK 1096
Cdd:COG4913 841 NENS---------IEFVADLLSKLRRAIR-EIK--ERIDPLNDSLKR 875
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
485-1227 |
1.50e-05 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 50.82 E-value: 1.50e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 485 NPATKLLNQENIESELN----SLRAD--------YDNLVLDyEQLRTEKEEMELKLKEKNDLDEFEALERKTKKDQEMQL 552
Cdd:TIGR00606 332 NKERRLLNQEKTELLVEqgrlQLQADrhqehiraRDSLIQS-LATRLELDGFERGPFSERQIKNFHTLVIERQEDEAKTA 410
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 553 IHEISNLKNLVKHAEVYNQDLENELSSKVELLREKEDQIKKLQEYIDSQK--LENIKMDLSYSLESIEDPKQMKQTLFDA 630
Cdd:TIGR00606 411 AQLCADLQSKERLKQEQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIkeLQQLEGSSDRILELDQELRKAERELSKA 490
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 631 ETVALDA--KRESAFLRSENLELKEKMKELATTYKQMENDIQ-LYQSQLEAKKKMQVDLE-------------------- 687
Cdd:TIGR00606 491 EKNSLTEtlKKEVKSLQNEKADLDRKLRKLDQEMEQLNHHTTtRTQMEMLTKDKMDKDEQirkiksrhsdeltsllgyfp 570
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 688 --KELQSAFNEITKLTSLIDGKVPKDLLCNLELEGKITDLQKELNKEVEENEALREEVILLSELKSLPSEVERLRKEIQD 765
Cdd:TIGR00606 571 nkKQLEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKLFDVCGSQDEESDLERLKEEIEK 650
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 766 KSEELHII---TSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLattqsnykstdQEFQNfktlhmDFEQKYKMVLEENER 842
Cdd:TIGR00606 651 SSKQRAMLagaTAVYSQFITQLTDENQSCCPVCQRVFQTEAEL-----------QEFIS------DLQSKLRLAPDKLKS 713
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 843 MNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTL---------I 913
Cdd:TIGR00606 714 TESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEESakvcltdvtI 793
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 914 TEKLQQTLEEV-KTLTQEKDDLKQLQESLQI----ERDQLKSDIHDTVNMNIDTQEQLRNALESLKQH-QETINTLKS-- 985
Cdd:TIGR00606 794 MERFQMELKDVeRKIAQQAAKLQGSDLDRTVqqvnQEKQEKQHELDTVVSKIELNRKLIQDQQEQIQHlKSKTNELKSek 873
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 986 -KISEEVSRNLHMEENTGETKDEFQQKMVGIDKKQDLEAKNTQTLTADVKDNEIIEQQRkifsliQEKNELQQMLESVIA 1064
Cdd:TIGR00606 874 lQIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQDSPLETFLEKDQQEKEELISSK------ETSNKKAQDKVNDIK 947
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1065 EKEQLKTDLKENIEMTIENQEELRLLgdelkkqqeivaQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLL 1144
Cdd:TIGR00606 948 EKVKNIHGYMKDIENKIQDGKDDYLK------------QKETELNTVNAQLEECEKHQEKINEDMRLMRQDIDTQKIQER 1015
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1145 NVQEEMSEMQKKiNEIENLKNELKNKELTLEHMETerLELAQKLNENYEEVKSITKERKVLKELQKSFETERDHLRGYIR 1224
Cdd:TIGR00606 1016 WLQDNLTLRKRE-NELKEVEEELKQHLKEMGQMQV--LQMKQEHQKLEENIDLIKRNHVLALGRQKGYEKEIKHFKKELR 1092
|
...
gi 767930917 1225 EIE 1227
Cdd:TIGR00606 1093 EPQ 1095
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
541-1103 |
1.70e-05 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 50.71 E-value: 1.70e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 541 ERKTKKDQEMQLiHEISNLKNLVKHAEVYNQDLENELSSKVELLREKEDQIKKLQEYIDSQKLENIKMDLSYSLESIEDP 620
Cdd:COG1196 220 EELKELEAELLL-LKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELA 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 621 KQMKQTLFDAETVAlDAKRESAFLRSENLELKEKMKELATTYKQMENDIQLYQSQLEAKKKMQVDLEKELQSAFNEITKL 700
Cdd:COG1196 299 RLEQDIARLEERRR-ELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEA 377
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 701 TSLIDGKVpKDLLcnLELEGKITDLQKELNKEVEENEALREEVILLSELKSLPSEVERLRKEIQDKSEELHIITSEKDKL 780
Cdd:COG1196 378 EEELEELA-EELL--EALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAEL 454
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 781 FSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEFQNFKTLHMDFEQKYKMVLEENERMNQEIVN--LSKEAQKFD 858
Cdd:COG1196 455 EEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAgaVAVLIGVEA 534
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 859 SSLGALKTELSYKTQELQEKTREVQERLneMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQ 938
Cdd:COG1196 535 AYEAALEAALAAALQNIVVEDDEVAAAA--IEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREAD 612
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 939 ESLQIERDQL--KSDIHDTVNMNIDTQEQLRNALESLKQHQETINTLKSKISEEVSRNLHMEENTGETKDEFQQKMvgID 1016
Cdd:COG1196 613 ARYYVLGDTLlgRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERL--AE 690
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1017 KKQDLEAKNTQTLTADVKDNEIIEQQRkifsliQEKNELQQMLESVIAEKEQLKTDLKENIEMTIENQEELRLLGDELKK 1096
Cdd:COG1196 691 EELELEEALLAEEEEERELAEAEEERL------EEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEE 764
|
....*..
gi 767930917 1097 QQEIVAQ 1103
Cdd:COG1196 765 LERELER 771
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
512-785 |
2.10e-05 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 49.93 E-value: 2.10e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 512 LDYEQLRTEKEEMElKLKEKndLDEFEALERKTKKDQEMQLIHEISNLKNLVKHAEVYNQDLENELSSKVELLREKEDQI 591
Cdd:PRK05771 40 LSNERLRKLRSLLT-KLSEA--LDKLRSYLPKLNPLREEKKKVSVKSLEELIKDVEEELEKIEKEIKELEEEISELENEI 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 592 KKLQEYIDS-QKLENIKMDLSYslesiedpkqmkqtLFDAETVALDAKRESAFLRSENLELKEKMKELATTYKQMENDIQ 670
Cdd:PRK05771 117 KELEQEIERlEPWGNFDLDLSL--------------LLGFKYVSVFVGTVPEDKLEELKLESDVENVEYISTDKGYVYVV 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 671 LYqsqleAKKKMQVDLEKELqsAFNEITKLtSLIDGKVPKDLLCNL-----ELEGKITDLQKELNK-------------E 732
Cdd:PRK05771 183 VV-----VLKELSDEVEEEL--KKLGFERL-ELEEEGTPSELIREIkeeleEIEKERESLLEELKElakkyleellalyE 254
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 767930917 733 VEENEALREEViLLSELKS---------LPSE-VERLRKEIQDKSEELHIITSEKDKLFSEVV 785
Cdd:PRK05771 255 YLEIELERAEA-LSKFLKTdktfaiegwVPEDrVKKLKELIDKATGGSAYVEFVEPDEEEEEV 316
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
493-989 |
2.64e-05 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 49.94 E-value: 2.64e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 493 QENIESELNSLRADYDNLVLDYEQLRtekEEMELKLKEKNDLDEFEALERKTKKDQEMQLIHEISNLKNLVKHAEVYNQD 572
Cdd:COG1196 262 LAELEAELEELRLELEELELELEEAQ---AEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEE 338
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 573 LENELSSKVELLREKEDQIKKLQeyidsQKLENIKMDLSYSLESIEDPKQMKQTLFDAETVALDAKRESAFLRSENLELK 652
Cdd:COG1196 339 LEELEEELEEAEEELEEAEAELA-----EAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALL 413
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 653 EKMKELATTYKQMENDIQLYQSQLEAKKKMQVDLEKELQSAFNEITKLTSLIDGKVPKDLLCNLELEGKITDLQK----- 727
Cdd:COG1196 414 ERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEaaarl 493
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 728 ELNKEVEENEALREEVILLSELKSLPSEVER-LRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTK---- 802
Cdd:COG1196 494 LLLLEAEADYEGFLEGVKAALLLAGLRGLAGaVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAkagr 573
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 803 ------DDLATTQSNYKSTDQEFQNFKTLHMDFEQKY----KMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELS-YK 871
Cdd:COG1196 574 atflplDKIRARAALAAALARGAIGAAVDLVASDLREadarYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTlEG 653
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 872 TQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSD 951
Cdd:COG1196 654 EGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAE 733
|
490 500 510
....*....|....*....|....*....|....*...
gi 767930917 952 IHDTVNMNIDTQEQLRNALESLKQHQETINTLKSKISE 989
Cdd:COG1196 734 REELLEELLEEEELLEEEALEELPEPPDLEELERELER 771
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1730-1992 |
3.26e-05 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 49.65 E-value: 3.26e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1730 LKEQQETIDKLRGIVSEKTDK-LSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDVNET----QKKVSEMEQLKKQIK 1804
Cdd:PRK02224 182 LSDQRGSLDQLKAQIEEKEEKdLHERLNGLESELAELDEEIERYEEQREQARETRDEADEVleehEERREELETLEAEIE 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1805 DQSLTLSKLEIENLNLAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKTARMLSKEHK 1884
Cdd:PRK02224 262 DLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHN 341
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1885 ETVDKLREKISEKTIQISDIQKDLDKSKDELQKKIQELQKKELQLLRVKEDVNMSHKKINEMEQLKKQFEAQNLSMQSVR 1964
Cdd:PRK02224 342 EEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREER 421
|
250 260
....*....|....*....|....*...
gi 767930917 1965 MDNFQLTKKLHESLEEIRIVAKERDELR 1992
Cdd:PRK02224 422 DELREREAELEATLRTARERVEEAEALL 449
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1428-2053 |
3.36e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 49.53 E-value: 3.36e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1428 KRLQESHDEMKSVAKEKDDLQRL------------QEVLQSESDQLKENIKEIVAKHLETEEELKvahcclkEQEETINE 1495
Cdd:COG4913 255 EPIRELAERYAAARERLAELEYLraalrlwfaqrrLELLEAELEELRAELARLEAELERLEARLD-------ALREELDE 327
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1496 LRVNLSEKETE-ISTIQKQLEAINDKLQNKIQ--EIYEKE-EQFNIKQISEVQEKVNELKQFKEHRKAKDSALQSIESKM 1571
Cdd:COG4913 328 LEAQIRGNGGDrLEQLEREIERLERELEERERrrARLEALlAALGLPLPASAEEFAALRAEAAALLEALEEELEALEEAL 407
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1572 LELTNRLQESQEEIQIMIKEKEEMKRVQ----EALQIERDQLKENTKEIVAKM---------KESQEK------------ 1626
Cdd:COG4913 408 AEAEAALRDLRRELRELEAEIASLERRKsnipARLLALRDALAEALGLDEAELpfvgelievRPEEERwrgaiervlggf 487
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1627 --------EY--QFLKmtAVNETqekmceieHLKEQFETQKLNLENIETENIR--------------------LTQILH- 1675
Cdd:COG4913 488 altllvppEHyaAALR--WVNRL--------HLRGRLVYERVRTGLPDPERPRldpdslagkldfkphpfrawLEAELGr 557
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1676 -------ENLEEM----RSVTKE--------------RDDLRSV----------EETLKVERDQLKENLRE------TIT 1714
Cdd:COG4913 558 rfdyvcvDSPEELrrhpRAITRAgqvkgngtrhekddRRRIRSRyvlgfdnrakLAALEAELAELEEELAEaeerleALE 637
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1715 RDLKIQEELRIAHMHLKEQQETIDKLRGIVSEkTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDVNETQKKVS 1794
Cdd:COG4913 638 AELDALQERREALQRLAEYSWDEIDVASAERE-IAELEAELERLDASSDDLAALEEQLEELEAELEELEEELDELKGEIG 716
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1795 EMEQLKKQIKDQsltlskleienlnlaqklhenLEEMKSVMKERDNLRRVEETLKLErDQLKESLQETKARDL--EIQQE 1872
Cdd:COG4913 717 RLEKELEQAEEE---------------------LDELQDRLEAAEDLARLELRALLE-ERFAAALGDAVERELreNLEER 774
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1873 LKTARmlsKEHKETVDKLREKISEKTIQISDIQKDLDKSKDELQKKIQELQK-KELQLLRVKEdvnmshkkinEMEQLKK 1951
Cdd:COG4913 775 IDALR---ARLNRAEEELERAMRAFNREWPAETADLDADLESLPEYLALLDRlEEDGLPEYEE----------RFKELLN 841
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1952 QFEAQNLSmqsvrmdnfQLTKKLHESLEEIrivakeRDELRRIKESLKM---ERDQFIatlrEMIARDRQNHQVKPEKRL 2028
Cdd:COG4913 842 ENSIEFVA---------DLLSKLRRAIREI------KERIDPLNDSLKRipfGPGRYL----RLEARPRPDPEVREFRQE 902
|
730 740
....*....|....*....|....*....
gi 767930917 2029 L---SDGQQHLTESLREK-CSRIKELLKR 2053
Cdd:COG4913 903 LravTSGASLFDEELSEArFAALKRLIER 931
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1439-1611 |
3.54e-05 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 47.61 E-value: 3.54e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1439 SVAKEKDDLQRLQEvLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNLSEKETEISTIQKQLEAIN 1518
Cdd:COG1579 1 AMPEDLRALLDLQE-LDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYE 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1519 DKLQ----NKIQEIYEKEEQFNIKQISEVQEkvnELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQimiKEKEE 1594
Cdd:COG1579 80 EQLGnvrnNKEYEALQKEIESLKRRISDLED---EILELMERIEELEEELAELEAELAELEAELEEKKAELD---EELAE 153
|
170
....*....|....*..
gi 767930917 1595 MKRVQEALQIERDQLKE 1611
Cdd:COG1579 154 LEAELEELEAEREELAA 170
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
863-1104 |
3.86e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.61 E-value: 3.86e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 863 ALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEkddLKQLQESLQ 942
Cdd:COG4942 24 EAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKE---IAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 943 IERDQLKsdihdtvnmnidtqEQLRnALESLKQHQETINTLKSKISEEVSRNLHMeentgetkdefQQKMVGIDKKQDLE 1022
Cdd:COG4942 101 AQKEELA--------------ELLR-ALYRLGRQPPLALLLSPEDFLDAVRRLQY-----------LKYLAPARREQAEE 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1023 AKNTQTLTADVKDnEIIEQQRKIFSLIQEKNELQQMLESVIAEKEQLKTDLKEN-------IEMTIENQEELRLLGDELK 1095
Cdd:COG4942 155 LRADLAELAALRA-ELEAERAELEALLAELEEERAALEALKAERQKLLARLEKElaelaaeLAELQQEAEELEALIARLE 233
|
....*....
gi 767930917 1096 KQQEIVAQE 1104
Cdd:COG4942 234 AEAAAAAER 242
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
1559-2222 |
4.08e-05 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 49.20 E-value: 4.08e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1559 AKDSALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIvAKMKESQEKEYQFLKMTAVNE 1638
Cdd:TIGR00618 219 ERKQVLEKELKHLREALQQTQQSHAYLTQKREAQEEQLKKQQLLKQLRARIEELRAQE-AVLEETQERINRARKAAPLAA 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1639 TQEKMCEIEhlkeqFETQKLNLENIETENIRlTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETITRDLK 1718
Cdd:TIGR00618 298 HIKAVTQIE-----QQAQRIHTELQSKMRSR-AKLLMKRAAHVKQQSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREIS 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1719 IQEELRIAHMHLKEQQETIDKlrgivsEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDVnETQKKVSEMEQ 1798
Cdd:TIGR00618 372 CQQHTLTQHIHTLQQQKTTLT------QKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQ-ELQQRYAELCA 444
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1799 LKKQIKDQSLTLSKLEienlnlAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQET----KARDLEIQQELK 1874
Cdd:TIGR00618 445 AAITCTAQCEKLEKIH------LQESAQSLKEREQQLQTKEQIHLQETRKKAVVLARLLELQEEpcplCGSCIHPNPARQ 518
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1875 --------TARMLSKEhkETVDKLREKISEKTIQISDIQKDLDKSKDELQKKIQELQKKELQLLRVKEDVNmshKKINEM 1946
Cdd:TIGR00618 519 didnpgplTRRMQRGE--QTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIP---NLQNIT 593
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1947 EQLKKQFEAQNLSMQSVRMDNFQLTKKLHESLEEIRIVAKERD-ELRRIKESLKMERDQFIAT---LREMIARDRQNHQV 2022
Cdd:TIGR00618 594 VRLQDLTEKLSEAEDMLACEQHALLRKLQPEQDLQDVRLHLQQcSQELALKLTALHALQLTLTqerVREHALSIRVLPKE 673
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2023 KPEKRLLS-DGQQHLTES-------LREKCSRIKELLKRYSEMDDHYECLNRLSLDLEKEIEFQKELsmrvkANLSLPYL 2094
Cdd:TIGR00618 674 LLASRQLAlQKMQSEKEQltywkemLAQCQTLLRELETHIEEYDREFNEIENASSSLGSDLAAREDA-----LNQSLKEL 748
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2095 QTKHIEKLftanqrCSMEFHRIMKKLKYVLSYVTKIKEEQHESINKFEMDFIDEVEKQKELLIKIQHLQQDCDVPSRELR 2174
Cdd:TIGR00618 749 MHQARTVL------KARTEAHFNNNEEVTAALQTGAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQ 822
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*.
gi 767930917 2175 DLKLNQ---NMDLHIEEILKDFSE-----SEFPSIKTEFQQVLSNRKEMTQFLEEW 2222
Cdd:TIGR00618 823 CETLVQeeeQFLSRLEEKSATLGEithqlLKYEECSKQLAQLTQEQAKIIQLSDKL 878
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1323-1479 |
4.57e-05 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 47.23 E-value: 4.57e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1323 LARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQSLNMKEKDNettkI 1402
Cdd:COG1579 19 LDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNNKEYEA----L 94
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 767930917 1403 VSEMEQFKPKDSALLRIEIEMLGLSKRLQESHDEMKS-VAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEEL 1479
Cdd:COG1579 95 QKEIESLKRRISDLEDEILELMERIEELEEELAELEAeLAELEAELEEKKAELDEELAELEAELEELEAEREELAAKI 172
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
1278-1948 |
4.62e-05 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 49.05 E-value: 4.62e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1278 LQEEIPVLHEEQELLP-NVKEVSETQETMNELELLTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKT 1356
Cdd:pfam10174 58 LKEQYRVTQEENQHLQlTIQALQDELRAQRDLNQLLQQDFTTSPVDGEDKFSTPELTEENFRRLQSEHERQAKELFLLRK 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1357 IKEALEVKHDQLKEHIRETLAKIQE----SQSKQEQSLNMKEKDNETTKIVSEMEQFKPKDSALLRIEIEMLGLSKRLQE 1432
Cdd:pfam10174 138 TLEEMELRIETQKQTLGARDESIKKllemLQSKGLPKKSGEEDWERTRRIAEAEMQLGHLEVLLDQKEKENIHLREELHR 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1433 SHDEMKSVAKEK-------------DDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVN 1499
Cdd:pfam10174 218 RNQLQPDPAKTKalqtviemkdtkiSSLERNIRDLEDEVQMLKTNGLLHTEDREEEIKQMEVYKSHSKFMKNKIDQLKQE 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1500 LSEKETEISTIQKQLEAINDklqnkiqeiyekeEQFNIKQISEVqekvnelkqFKEHRKAKDSALQSIESKMLELTNRLQ 1579
Cdd:pfam10174 298 LSKKESELLALQTKLETLTN-------------QNSDCKQHIEV---------LKESLTAKEQRAAILQTEVDALRLRLE 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1580 ESQeeiQIMIKEKEEMKRVQEAlqierdqlKENTKEIVAKMKESQEkeyqfLKMTAVNETQEKmceIEHLKEQFETQKLN 1659
Cdd:pfam10174 356 EKE---SFLNKKTKQLQDLTEE--------KSTLAGEIRDLKDMLD-----VKERKINVLQKK---IENLQEQLRDKDKQ 416
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1660 LENietenirltqiLHENLEEMRSVTKERDD-LRSVEETLKvERDQLKENLRETITR-DLKIQEELRIAHMHLKEQQETI 1737
Cdd:pfam10174 417 LAG-----------LKERVKSLQTDSSNTDTaLTTLEEALS-EKERIIERLKEQREReDRERLEELESLKKENKDLKEKV 484
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1738 DKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDVNETQ---KKVSEMEQLKKQIKDQSLTLSKLE 1814
Cdd:pfam10174 485 SALQPELTEKESSLIDLKEHASSLASSGLKKDSKLKSLEIAVEQKKEECSKLEnqlKKAHNAEEAVRTNPEINDRIRLLE 564
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1815 IE---NLNLAQKLHENLEEMKSVMKERDNL-----RRVEETLKLERDQLKE-SLQETKARDLEIQQELKTARMLSKEHKE 1885
Cdd:pfam10174 565 QEvarYKEESGKAQAEVERLLGILREVENEkndkdKKIAELESLTLRQMKEqNKKVANIKHGQQEMKKKGAQLLEEARRR 644
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 767930917 1886 TVDKLRE----KISEKTIQISDIQKDLDKSKDELQKKIQELQKKELQLLRVKEDVNMSHKKINEMEQ 1948
Cdd:pfam10174 645 EDNLADNsqqlQLEELMGALEKTRQELDATKARLSSTQQSLAEKDGHLTNLRAERRKQLEEILEMKQ 711
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1761-1987 |
4.63e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.22 E-value: 4.63e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1761 SNAKLQEKIQELKANEHQLITLKKDVNETQKKVSEmeqLKKQIKDQSLTLSKLEIENLNLAQKLHENLEEMKSVMKERDN 1840
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKA---LLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAE 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1841 LRRVEETLKLERDQLKESLQETKARD-----LEIQQELKTARMLS--KEHKETVDKLREKISEKTIQISDIQKDLDKSKD 1913
Cdd:COG4942 95 LRAELEAQKEELAELLRALYRLGRQPplallLSPEDFLDAVRRLQylKYLAPARREQAEELRADLAELAALRAELEAERA 174
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 767930917 1914 ELQKKIQELQKKELQLLRVKEDvnmshkKINEMEQLKKQFEAQNLSMQSVRMDNFQLTKKLHESLEEIRIVAKE 1987
Cdd:COG4942 175 ELEALLAELEEERAALEALKAE------RQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1682-1923 |
6.03e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 48.47 E-value: 6.03e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1682 RSVTKERDDLRSVEETLKVERDQLKENLRETitrdlkiQEELRiahmHLKEQQETIDklrgiVSEKTDKLSNMQKDLENS 1761
Cdd:COG3206 164 QNLELRREEARKALEFLEEQLPELRKELEEA-------EAALE----EFRQKNGLVD-----LSEEAKLLLQQLSELESQ 227
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1762 NAKLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQLkKQIKDQsltLSKLEIENLNLAQKLHENLEEMKSVMKERDNL 1841
Cdd:COG3206 228 LAEARAELAEAEARLAALRAQLGSGPDALPELLQSPVI-QQLRAQ---LAELEAELAELSARYTPNHPDVIALRAQIAAL 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1842 RRveetlklerdQLKESLQETKArdlEIQQELKTARMLSKEHKETVDKLREKIS---EKTIQISDIQKDLDKSK---DEL 1915
Cdd:COG3206 304 RA----------QLQQEAQRILA---SLEAELEALQAREASLQAQLAQLEARLAelpELEAELRRLEREVEVARelyESL 370
|
....*...
gi 767930917 1916 QKKIQELQ 1923
Cdd:COG3206 371 LQRLEEAR 378
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
1025-1388 |
6.06e-05 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 48.58 E-value: 6.06e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1025 NTQTLTADVKDNEI--IEQQRKIFSLIQEKNELQQM-LESVIAEKEQLKTDLKENIEMtiENQEELRllGDELKKQQEIV 1101
Cdd:pfam17380 261 NGQTMTENEFLNQLlhIVQHQKAVSERQQQEKFEKMeQERLRQEKEEKAREVERRRKL--EEAEKAR--QAEMDRQAAIY 336
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1102 AQEKNHAIKKEGELSRTcdrlaEVEEKLKEKSQQLqekqqqllnvQEEMSEMQKKINEIENLKNELKNKELTLEhmetER 1181
Cdd:pfam17380 337 AEQERMAMERERELERI-----RQEERKRELERIR----------QEEIAMEISRMRELERLQMERQQKNERVR----QE 397
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1182 LELAQKLNENYEEVKSITKERKVLKELQKSFETErdhlrgyIREIEATGLQTKEELKIAHIHLK--EHQETIDELRRSVS 1259
Cdd:pfam17380 398 LEAARKVKILEEERQRKIQQQKVEMEQIRAEQEE-------ARQREVRRLEEERAREMERVRLEeqERQQQVERLRQQEE 470
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1260 EKTAQIINtQDLEKSHTKLQEEIPVLHEEQELLPNVKEVSETQETMNELELLTEQSTTKDSTTLARIEMERLRLNEKFQE 1339
Cdd:pfam17380 471 ERKRKKLE-LEKEKRDRKRAEEQRRKILEKELEERKQAMIEEERKRKLLEKEMEERQKAIYEEERRREAEEERRKQQEME 549
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 767930917 1340 S----QEEIKSLTKERDNLKTIkealevkhdqlkEHIRETLAKIQESQSKQEQ 1388
Cdd:pfam17380 550 ErrriQEQMRKATEERSRLEAM------------EREREMMRQIVESEKARAE 590
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1186-1688 |
6.09e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 48.61 E-value: 6.09e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1186 QKLNENYEEVKSITKERKVLKELQKSFETERDHLRGYIREIEAtgLQTKEELKIAHIHLKEHQETIDELRRSVSEKTAQI 1265
Cdd:COG4717 64 RKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEE--LEAELEELREELEKLEKLLQLLPLYQELEALEAEL 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1266 intQDLEKSHTKLQEEIPVLHEEQELLPNVKEvsETQETMNELELLTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIK 1345
Cdd:COG4717 142 ---AELPERLEELEERLEELRELEEELEELEA--ELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELE 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1346 SLTKERDNLKTIKEALEVKHdqlkehireTLAKIQESQSKQEQSLNmkekdneTTKIVSEMEQFKPKDSALLRIEIEMLG 1425
Cdd:COG4717 217 EAQEELEELEEELEQLENEL---------EAAALEERLKEARLLLL-------IAAALLALLGLGGSLLSLILTIAGVLF 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1426 LSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHccLKEQEETINELRVNLSEKET 1505
Cdd:COG4717 281 LVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEE--LLELLDRIEELQELLREAEE 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1506 EISTIQKQleaindKLQNKIQEIYEKEEQFNIKQISEVQEKVNELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEI 1585
Cdd:COG4717 359 LEEELQLE------ELEQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDEEELEE 432
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1586 QImikekEEMKRVQEALQIERDQLKENTKEIVAKMKESQEKEyqflkmtavnetqekmcEIEHLKEQFETQKLNLENIET 1665
Cdd:COG4717 433 EL-----EELEEELEELEEELEELREELAELEAELEQLEEDG-----------------ELAELLQELEELKAELRELAE 490
|
490 500
....*....|....*....|...
gi 767930917 1666 ENIRLtQILHENLEEMRSVTKER 1688
Cdd:COG4717 491 EWAAL-KLALELLEEAREEYREE 512
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
873-1468 |
7.37e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 48.37 E-value: 7.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 873 QELQEKTREVQERLNEMEQLKEQLEnrdstLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDI 952
Cdd:COG4913 258 RELAERYAAARERLAELEYLRAALR-----LWFAQRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQI 332
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 953 hdtvnMNIDTQ--EQLRNALESLKQHQETINTlKSKISEEVSRNLHMEENtgETKDEFQQKMVGI----DKKQDLEAKNT 1026
Cdd:COG4913 333 -----RGNGGDrlEQLEREIERLERELEERER-RRARLEALLAALGLPLP--ASAEEFAALRAEAaallEALEEELEALE 404
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1027 QTLTAdvKDNEIIEQQRKIFSLIQEKNELQQMLESVIAEKEQLKTDLKENIEMTienQEELRLLGDELkkqqEIVAQEKN 1106
Cdd:COG4913 405 EALAE--AEAALRDLRRELRELEAEIASLERRKSNIPARLLALRDALAEALGLD---EAELPFVGELI----EVRPEEER 475
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1107 --HAIkkEGELS--RTC-----DRLAEV-----EEKLKEKsqqlqekqqqllnVQ-EEMSEMQKKINEIENLKNELKNKE 1171
Cdd:COG4913 476 wrGAI--ERVLGgfALTllvppEHYAAAlrwvnRLHLRGR-------------LVyERVRTGLPDPERPRLDPDSLAGKL 540
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1172 LTLEHMETERL--ELAQKLN----ENYEEV----KSITKERKVlkelqKSFETERDH-LRGYIREIEATGLQTKEelKIA 1240
Cdd:COG4913 541 DFKPHPFRAWLeaELGRRFDyvcvDSPEELrrhpRAITRAGQV-----KGNGTRHEKdDRRRIRSRYVLGFDNRA--KLA 613
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1241 HIhlkehQETIDELRRSVSEKTAQIINTQDLEKSHTKLQEEIPVLHEEQELLPNVKEVSET-QETMNELELLteqstTKD 1319
Cdd:COG4913 614 AL-----EAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEIDVASAEREiAELEAELERL-----DAS 683
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1320 STTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLK------------------------EHIRET 1375
Cdd:COG4913 684 SDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQdrleaaedlarlelralleerfaaALGDAV 763
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1376 LAKIQESQSKQEQSLNmKEKDNETTKIVSEMEQFK---PKDSALLRIEIEMLG----LSKRLQESH-----DEMKSVAKE 1443
Cdd:COG4913 764 ERELRENLEERIDALR-ARLNRAEEELERAMRAFNrewPAETADLDADLESLPeylaLLDRLEEDGlpeyeERFKELLNE 842
|
650 660
....*....|....*....|....*..
gi 767930917 1444 --KDDLQRLQEVLQSESDQLKENIKEI 1468
Cdd:COG4913 843 nsIEFVADLLSKLRRAIREIKERIDPL 869
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
880-1211 |
7.88e-05 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 48.20 E-value: 7.88e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 880 REVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQT-LEEVKTLTQEkddlkqlQESLQIERDQLKSDIHdtvnm 958
Cdd:pfam17380 287 RQQQEKFEKMEQERLRQEKEEKAREVERRRKLEEAEKARQAeMDRQAAIYAE-------QERMAMERERELERIR----- 354
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 959 nidtQEQLRNALESLKQHQetintlkskISEEVSRNLHMEentgETKDEFQQKMVGIdkKQDLEAKNTQTLTADVKDNEI 1038
Cdd:pfam17380 355 ----QEERKRELERIRQEE---------IAMEISRMRELE----RLQMERQQKNERV--RQELEAARKVKILEEERQRKI 415
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1039 IEQQRKIFSLIQEKNELQQMLESVIAEKEQLKTDLKENIEMTIENQEElRLLGDELKKQQEIVAQEKNHAIKKEGELSRT 1118
Cdd:pfam17380 416 QQQKVEMEQIRAEQEEARQREVRRLEEERAREMERVRLEEQERQQQVE-RLRQQEEERKRKKLELEKEKRDRKRAEEQRR 494
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1119 cdrlAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNKELTLEHMETERL-ELAQKLNENYEEVKS 1197
Cdd:pfam17380 495 ----KILEKELEERKQAMIEEERKRKLLEKEMEERQKAIYEEERRREAEEERRKQQEMEERRRIqEQMRKATEERSRLEA 570
|
330
....*....|....
gi 767930917 1198 ITKERKVLKELQKS 1211
Cdd:pfam17380 571 MEREREMMRQIVES 584
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1719-2461 |
8.18e-05 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 48.51 E-value: 8.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1719 IQEELRIAHMHLKEQQETIDKLRGIVSEKTD-KLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSEME 1797
Cdd:TIGR02168 194 ILNELERQLKSLERQAEKAERYKELKAELRElELALLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELR 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1798 QLKKQIKDQSLTLSKleiENLNLAQKLHEnLEEMKSVMKER-DNLRRVEETLKLERDQLKESLQETKARDLEIQQELKTA 1876
Cdd:TIGR02168 274 LEVSELEEEIEELQK---ELYALANEISR-LEQQKQILRERlANLERQLEELEAQLEELESKLDELAEELAELEEKLEEL 349
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1877 RMLSKEHKETVDKLREKISEKTIQISDIQKDLDKSKDELQKKIQELQKKELQLLRVKEDVNMSHKKInemEQLKKQFEAQ 1956
Cdd:TIGR02168 350 KEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRR---ERLQQEIEEL 426
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1957 NLSMQSVRMdnfqltKKLHESLEEIRIVAKE-RDELRRIKESLKMERDQFIATLREMIARDRQNHQVKPEKRLLSDGQQH 2035
Cdd:TIGR02168 427 LKKLEEAEL------KELQAELEELEEELEElQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQEN 500
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2036 LTESLREkcsrIKELLKRYSEMDDHYECLNRLsldlekeIEFQKELSMRVKANL--SLPYLQTKHIEKLFTANQrcSMEF 2113
Cdd:TIGR02168 501 LEGFSEG----VKALLKNQSGLSGILGVLSEL-------ISVDEGYEAAIEAALggRLQAVVVENLNAAKKAIA--FLKQ 567
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2114 HRIMKKLKYVLS-----YVTKIKEEQHESINKFEMDFIDEVEKQKELLIKIQHLqqdcdvpsreLRDLKLNQNMDLHIEe 2188
Cdd:TIGR02168 568 NELGRVTFLPLDsikgtEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYL----------LGGVLVVDDLDNALE- 636
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2189 ILKDFSESEfpSIKTEFQQVLSNRKEMTQFLEEW----LNTRFDIEKLKNGIQKENDRICQVNNffnnRIIAIMNESTEF 2264
Cdd:TIGR02168 637 LAKKLRPGY--RIVTLDGDLVRPGGVITGGSAKTnssiLERRREIEELEEKIEELEEKIAELEK----ALAELRKELEEL 710
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2265 EERSATISKEWEQDLKSLKEknekLFKNYQTLKTSLASGAQVNPTTQDNKNPHVTSRATQLttEKIRELENSLHEAKESA 2344
Cdd:TIGR02168 711 EEELEQLRKELEELSRQISA----LRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELE--ERLEEAEEELAEAEAEI 784
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2345 MHKESKIIKMQKELEVTNDIIAKLQAKVHESNKCLEKTKETIQVLQDKVALGAKPY---KEEIEDLKMKLVKIDLEkMKN 2421
Cdd:TIGR02168 785 EELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLedlEEQIEELSEDIESLAAE-IEE 863
|
730 740 750 760
....*....|....*....|....*....|....*....|
gi 767930917 2422 AKEFEKEISATKATVEYQKEVIRLLRENLRRSQQAQDTSV 2461
Cdd:TIGR02168 864 LEELIEELESELEALLNERASLEEALALLRSELEELSEEL 903
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1428-1629 |
8.47e-05 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 47.52 E-value: 8.47e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1428 KRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNLSEKETEI 1507
Cdd:COG3883 23 KELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERARALYRSGGSV 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1508 STIQ---------------KQLEAINDKLQNKIQEIYEKEEQFNIKQiSEVQEKVNELKQFK----EHRKAKDSALQSIE 1568
Cdd:COG3883 103 SYLDvllgsesfsdfldrlSALSKIADADADLLEELKADKAELEAKK-AELEAKLAELEALKaeleAAKAELEAQQAEQE 181
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 767930917 1569 SKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKMKESQEKEYQ 1629
Cdd:COG3883 182 ALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 242
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
685-1212 |
9.02e-05 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 47.97 E-value: 9.02e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 685 DLEKELQSAFNEITKLTSLIDGKVPKDLLCNLELEGKITDLQKELNKEVEENEALREEVILLSELKSLPSEVERLRKEIQ 764
Cdd:PRK01156 187 YLEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALNELSSLEDMKNRYESEIKTAESDLS 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 765 DKSEELHIITSEKDKLF----SEVVHKESRVQGL------------------------------LEEIGKTKDDLATTQS 810
Cdd:PRK01156 267 MELEKNNYYKELEERHMkiinDPVYKNRNYINDYfkykndienkkqilsnidaeinkyhaiikkLSVLQKDYNDYIKKKS 346
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 811 NYKSTDQEFQNFKTLHMDF-------EQKYKMVLEEN---ERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTR 880
Cdd:PRK01156 347 RYDDLNNQILELEGYEMDYnsylksiESLKKKIEEYSkniERMSAFISEILKIQEIDPDAIKKELNEINVKLQDISSKVS 426
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 881 EVQERLNEMEQLKEQLENRDSTL----------------------QTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQ 938
Cdd:PRK01156 427 SLNQRIRALRENLDELSRNMEMLngqsvcpvcgttlgeeksnhiiNHYNEKKSRLEEKIREIEIEVKDIDEKIVDLKKRK 506
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 939 ESLQIERdqlksdihdtVNMNIDTQEQLRNALESLKQHQETINTLKSKiseevsrnlhmeentgETKDEFQQKMVGIDKK 1018
Cdd:PRK01156 507 EYLESEE----------INKSINEYNKIESARADLEDIKIKINELKDK----------------HDKYEEIKNRYKSLKL 560
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1019 QDLEAKNTQTLTAD-VKDNEIIEQQRKIFSLIQEK-NELQQMLESVIAEKEQLKTDLKENIEmtiENQEELRLLGDELKK 1096
Cdd:PRK01156 561 EDLDSKRTSWLNALaVISLIDIETNRSRSNEIKKQlNDLESRLQEIEIGFPDDKSYIDKSIR---EIENEANNLNNKYNE 637
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1097 QQEIVAQEKnhaikkegELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNKELTLEH 1176
Cdd:PRK01156 638 IQENKILIE--------KLRGKIDNYKKQIAEIDSIIPDLKEITSRINDIEDNLKKSRKALDDAKANRARLESTIEILRT 709
|
570 580 590
....*....|....*....|....*....|....*.
gi 767930917 1177 METERLELAQKLNENYEEVKSITKERKVLKELQKSF 1212
Cdd:PRK01156 710 RINELSDRINDINETLESMKKIKKAIGDLKRLREAF 745
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
543-802 |
9.53e-05 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 48.00 E-value: 9.53e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 543 KTKKDQEMQLIHEIsnlkNLVkHAEVYNQDLENE-----------LSSKVELLR---EKEDQIKKLQEYIDSQKLENIKM 608
Cdd:PRK05771 15 KSYKDEVLEALHEL----GVV-HIEDLKEELSNErlrklrslltkLSEALDKLRsylPKLNPLREEKKKVSVKSLEELIK 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 609 DLSYSLESIEDpkqmkqtlfdaetvaldakresaflrsenlELKEKMKELattyKQMENDIQLYQSQLEAKKKMQ---VD 685
Cdd:PRK05771 90 DVEEELEKIEK------------------------------EIKELEEEI----SELENEIKELEQEIERLEPWGnfdLD 135
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 686 LEKELQSafneitKLTSLIDGKVPKDLLCNLELEGKIT--------------------DLQKELNKEVEENEALREEV-- 743
Cdd:PRK05771 136 LSLLLGF------KYVSVFVGTVPEDKLEELKLESDVEnveyistdkgyvyvvvvvlkELSDEVEEELKKLGFERLELee 209
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 767930917 744 ---------ILLSELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESrvqgLLEEIGKTK 802
Cdd:PRK05771 210 egtpselirEIKEELEEIEKERESLLEELKELAKKYLEELLALYEYLEIELERAE----ALSKFLKTD 273
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
859-1116 |
1.22e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 47.13 E-value: 1.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 859 SSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTverektlITEKLQQTLEEVKTLTQEKDDLKQLQ 938
Cdd:COG3883 2 LALALAAPTPAFADPQIQAKQKELSELQAELEAAQAELDALQAELEE-------LNEEYNELQAELEALQAEIDKLQAEI 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 939 ESLQIERDQLksdihdtvnmnidtQEQLRNALESLKQHQETINTLKSKISeevSRNLhmeentgetkDEFQQKMVGIDKK 1018
Cdd:COG3883 75 AEAEAEIEER--------------REELGERARALYRSGGSVSYLDVLLG---SESF----------SDFLDRLSALSKI 127
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1019 QDLEAKNTQTLTADVKDNE-----IIEQQRKIFSLIQEKNELQQMLESVIAEKEQLKTDLKENIEMTIENQEELRLLGDE 1093
Cdd:COG3883 128 ADADADLLEELKADKAELEakkaeLEAKLAELEALKAELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAA 207
|
250 260
....*....|....*....|...
gi 767930917 1094 LKKQQEIVAQEKNHAIKKEGELS 1116
Cdd:COG3883 208 AEAAAAAAAAAAAAAAAAAAAAA 230
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
837-1515 |
1.80e-04 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 47.02 E-value: 1.80e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 837 LEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLkeQLENRDSTL---QTVEREKTLI 913
Cdd:pfam05483 70 FENSEGLSRLYSKLYKEAEKIKKWKVSIEAELKQKENKLQENRKIIEAQRKAIQEL--QFENEKVSLkleEEIQENKDLI 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 914 TEK-----LQQTLEEVKTLTQEKDDLKQLQESlqiERDQLKSDIHDTVNMNIDTQEQLRNALES--------LKQHQETI 980
Cdd:pfam05483 148 KENnatrhLCNLLKETCARSAEKTKKYEYERE---ETRQVYMDLNNNIEKMILAFEELRVQAENarlemhfkLKEDHEKI 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 981 NTLKSKISEEVSRN--------LHMEENTGETKDEFQQKMVGIDKKQDLEAKntqTLTADVKDNEIIEQQRKIFSLIQE- 1051
Cdd:pfam05483 225 QHLEEEYKKEINDKekqvslllIQITEKENKMKDLTFLLEESRDKANQLEEK---TKLQDENLKELIEKKDHLTKELEDi 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1052 KNELQQMLESVIAEKEQLKTDLKENIEMTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLK- 1130
Cdd:pfam05483 302 KMSLQRSMSTQKALEEDLQIATKTICQLTEEKEAQMEELNKAKAAHSFVVTEFEATTCSLEELLRTEQQRLEKNEDQLKi 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1131 ------EKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKERKV 1204
Cdd:pfam05483 382 itmelqKKSSELEEMTKFKNNKEVELEELKKILAEDEKLLDEKKQFEKIAEELKGKEQELIFLLQAREKEIHDLEIQLTA 461
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1205 LKELQKSFETERDHLRG-----YIREIEATG------LQTKE---ELKIAHIHLKEHQETIDELRRSVSEKTAQIintQD 1270
Cdd:pfam05483 462 IKTSEEHYLKEVEDLKTelekeKLKNIELTAhcdkllLENKEltqEASDMTLELKKHQEDIINCKKQEERMLKQI---EN 538
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1271 LEKSHTKLQEEIPVLHEE-----QELLPNVKEVSETQETMNELELLTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIK 1345
Cdd:pfam05483 539 LEEKEMNLRDELESVREEfiqkgDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQENK 618
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1346 SLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQSLNMKEKDNEttKIVSEMEQFKPKDSALLRIEIEmlg 1425
Cdd:pfam05483 619 ALKKKGSAENKQLNAYEIKVNKLELELASAKQKFEEIIDNYQKEIEDKKISEE--KLLEEVEKAKAIADEAVKLQKE--- 693
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1426 LSKRLQESHDEMKSvakekddlqrLQEVLQSESDQLKEnikeivakhlETEEELKVAHCCLKEQEETINELRVNLSEKET 1505
Cdd:pfam05483 694 IDKRCQHKIAEMVA----------LMEKHKHQYDKIIE----------ERDSELGLYKNKEQEQSSAKAALEIELSNIKA 753
|
730
....*....|
gi 767930917 1506 EISTIQKQLE 1515
Cdd:pfam05483 754 ELLSLKKQLE 763
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
576-973 |
1.84e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 47.07 E-value: 1.84e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 576 ELSSKVELLREKEDQIKKLQEYIDSqklenikmdLSYSLESIEDpkqmKQTLFDAETVALDAKRESAFLRSENLELKEKM 655
Cdd:COG4717 75 ELEEELKEAEEKEEEYAELQEELEE---------LEEELEELEA----ELEELREELEKLEKLLQLLPLYQELEALEAEL 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 656 KELATTYKQMENDIQLYQSQLEAKKKMQVDLEkELQSAFNEITKLTSLIDGKVPKDLLCNLE-LEGKITDLQKELNKEVE 734
Cdd:COG4717 142 AELPERLEELEERLEELRELEEELEELEAELA-ELQEELEELLEQLSLATEEELQDLAEELEeLQQRLAELEEELEEAQE 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 735 ENEALREEVILLSELKSLPSEVERLRKEIQDKSEE--LHIITSEKDKLFSEVVH---------------------KESRV 791
Cdd:COG4717 221 ELEELEEELEQLENELEAAALEERLKEARLLLLIAaaLLALLGLGGSLLSLILTiagvlflvlgllallflllarEKASL 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 792 QGLLEEIGKTKDDLATTQSNYKSTDQEFQNFKTLHMDFEQKYKMVLEENERMNQEIVNLSKEAQ------KFDSSLGALK 865
Cdd:COG4717 301 GKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQleeleqEIAALLAEAG 380
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 866 TELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTL--ITEKLQQTLEEVKTLTQEKDDLKQLQESLQI 943
Cdd:COG4717 381 VEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDEeeLEEELEELEEELEELEEELEELREELAELEA 460
|
410 420 430
....*....|....*....|....*....|
gi 767930917 944 ERDQLKSDihDTVNMNIDTQEQLRNALESL 973
Cdd:COG4717 461 ELEQLEED--GELAELLQELEELKAELREL 488
|
|
| EzrA |
pfam06160 |
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like ... |
1510-1922 |
1.86e-04 |
|
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerizes into a ring structure that establishes the location of the nascent division site. EzrA modulates the frequency and position of FtsZ ring formation. The structure contains 5 spectrin like alpha helical repeats.
Pssm-ID: 428797 [Multi-domain] Cd Length: 542 Bit Score: 46.77 E-value: 1.86e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1510 IQKQLEAINDKLQNKIQEIYE---KEEQFNIKQIS---EVQEKVNELKQfkEHRKAKDSALQSIE--------------- 1568
Cdd:pfam06160 4 LRKKIYKEIDELEERKNELMNlpvQEELSKVKKLNltgETQEKFEEWRK--KWDDIVTKSLPDIEellfeaeelndkyrf 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1569 ----SKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIvakMKESQEKEYQFlkMTAVNETQEKMC 1644
Cdd:pfam06160 82 kkakKALDEIEELLDDIEEDIKQILEELDELLESEEKNREEVEELKDKYREL---RKTLLANRFSY--GPAIDELEKQLA 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1645 EIEHLKEQFETQKLN---------LENIETENIRLTQILHE---NLEEMRSVTKER-DDLRSVEETLKVERDQLKEN--- 1708
Cdd:pfam06160 157 EIEEEFSQFEELTESgdylearevLEKLEEETDALEELMEDippLYEELKTELPDQlEELKEGYREMEEEGYALEHLnvd 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1709 -----LRETITRDLKIQEELRIAHMH--LKEQQETIDKLRGI----------VSEKTDKLSNMQKDLENSNAKLQEKIQE 1771
Cdd:pfam06160 237 keiqqLEEQLEENLALLENLELDEAEeaLEEIEERIDQLYDLlekevdakkyVEKNLPEIEDYLEHAEEQNKELKEELER 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1772 LKA----NEHQLITLKKDVNETQKKVSEMEQLKKQIKDQSLTLSKLEIENLNLAQKLHENLEEMKSVMKERDNLRRVEET 1847
Cdd:pfam06160 317 VQQsytlNENELERVRGLEKQLEELEKRYDEIVERLEEKEVAYSELQEELEEILEQLEEIEEEQEEFKESLQSLRKDELE 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1848 LKLERDQLKESLQETK----ARDL-----EIQQELKTArmlskehKETVDKLREKISEKTIQISDIQKDLDKSK---DEL 1915
Cdd:pfam06160 397 AREKLDEFKLELREIKrlveKSNLpglpeSYLDYFFDV-------SDEIEDLADELNEVPLNMDEVNRLLDEAQddvDTL 469
|
....*..
gi 767930917 1916 QKKIQEL 1922
Cdd:pfam06160 470 YEKTEEL 476
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
721-931 |
2.15e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 46.30 E-value: 2.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 721 KITDLQKELNKEVEENEALREEVI-LLSELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIG 799
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAaLKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 800 KTKDDLAT-TQSNYKSTDQEFQNFKTLHMDFEQKYKM------VLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKT 872
Cdd:COG4942 101 AQKEELAElLRALYRLGRQPPLALLLSPEDFLDAVRRlqylkyLAPARREQAEELRADLAELAALRAELEAERAELEALL 180
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 767930917 873 QELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEK 931
Cdd:COG4942 181 AELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAA 239
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1564-1724 |
2.49e-04 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 45.30 E-value: 2.49e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1564 LQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKMKESQE--KEYQFLKMTAVNETqe 1641
Cdd:COG1579 12 LQELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEAriKKYEEQLGNVRNNK-- 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1642 kmcEIEHLKEQFETQKLNLENIETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETITRDLKIQE 1721
Cdd:COG1579 90 ---EYEALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAERE 166
|
...
gi 767930917 1722 ELR 1724
Cdd:COG1579 167 ELA 169
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
837-1216 |
2.58e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 46.30 E-value: 2.58e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 837 LEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQ--EKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLIT 914
Cdd:COG4717 80 LKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEklEKLLQLLPLYQELEALEAELAELPERLEELEERLEELR 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 915 EKLQQtleevktLTQEKDDLKQLQESLQIERDQLKSDIHDTVNMNIDTQEQLRNALESLKQHQETINTLKSKISEEVSR- 993
Cdd:COG4717 160 ELEEE-------LEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQl 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 994 -----NLHMEENTGETK---------------------------------------------------DEFQQKMVGIDK 1017
Cdd:COG4717 233 eneleAAALEERLKEARlllliaaallallglggsllsliltiagvlflvlgllallflllarekaslGKEAEELQALPA 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1018 KQDLEAKNTQTLTADVKDNEIIEQQRkIFSLIQEKNELQQMLESVIAEKEQLKTDLKEN------IEMTIENQEELRLLG 1091
Cdd:COG4717 313 LEELEEEELEELLAALGLPPDLSPEE-LLELLDRIEELQELLREAEELEEELQLEELEQeiaallAEAGVEDEEELRAAL 391
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1092 DELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEV-EEKLKEKsqqLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNK 1170
Cdd:COG4717 392 EQAEEYQELKEELEELEEQLEELLGELEELLEALdEEELEEE---LEELEEELEELEEELEELREELAELEAELEQLEED 468
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 767930917 1171 ElTLEHMETERLELAQKLNENYEEVKSITKERKVLKELQKSFETER 1216
Cdd:COG4717 469 G-ELAELLQELEELKAELRELAEEWAALKLALELLEEAREEYREER 513
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
515-743 |
2.65e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.91 E-value: 2.65e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 515 EQLRTEKEEMELKLKEKNDldefealERKTKKDQEMQLIHEISNLKNLVKHAEVYNQDLENELSSKVELLREKEDQIKKL 594
Cdd:COG4942 23 AEAEAELEQLQQEIAELEK-------ELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAEL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 595 QEYIDSQKLENIKMDLSYSLESIEDPKQMkqtLFDAETvALDAKRESAFLRSENLELKEKMKELATTYKQME---NDIQL 671
Cdd:COG4942 96 RAELEAQKEELAELLRALYRLGRQPPLAL---LLSPED-FLDAVRRLQYLKYLAPARREQAEELRADLAELAalrAELEA 171
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 767930917 672 YQSQLEAKKKMQVDLEKELQSAFNEITKLTSLIDGKVPKDLLCNLELEGKITDLQKELNKEVEENEALREEV 743
Cdd:COG4942 172 ERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERT 243
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
1430-1594 |
2.86e-04 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 46.31 E-value: 2.86e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1430 LQESHDEMKSVAKEKddlqrLQEVlQSESDQLKEnikeivakhlETEEELKVAHCCLKEQEETINELRVNLSEKETEIST 1509
Cdd:PRK12704 44 LEEAKKEAEAIKKEA-----LLEA-KEEIHKLRN----------EFEKELRERRNELQKLEKRLLQKEENLDRKLELLEK 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1510 IQKQLEAINDKLQNKIQEIYEKEEqfnikqisEVQEKVNELKQFKEHRkakdSALQSIESKMLELTNRLQESQEEIQIMI 1589
Cdd:PRK12704 108 REEELEKKEKELEQKQQELEKKEE--------ELEELIEEQLQELERI----SGLTAEEAKEILLEKVEEEARHEAAVLI 175
|
....*
gi 767930917 1590 KEKEE 1594
Cdd:PRK12704 176 KEIEE 180
|
|
| PRK04778 |
PRK04778 |
septation ring formation regulator EzrA; Provisional |
1557-1991 |
2.88e-04 |
|
septation ring formation regulator EzrA; Provisional
Pssm-ID: 179877 [Multi-domain] Cd Length: 569 Bit Score: 46.37 E-value: 2.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1557 RKAKdSALQSIESKMLELTNRLQESQEEIQimikekeEMKRVQEALQIERDQLKENTKEIvakMKESQEKEYQFlkMTAV 1636
Cdd:PRK04778 101 RKAK-HEINEIESLLDLIEEDIEQILEELQ-------ELLESEEKNREEVEQLKDLYREL---RKSLLANRFSF--GPAL 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1637 NETQEKMCEIEHLKEQFETQKLNLENIETENIRLTqiLHENLEEMRSVTKERDDLrsVEETLKVERDQLKEnLRETItrd 1716
Cdd:PRK04778 168 DELEKQLENLEEEFSQFVELTESGDYVEAREILDQ--LEEELAALEQIMEEIPEL--LKELQTELPDQLQE-LKAGY--- 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1717 lkiqEELRIAHMHLKEQQ--ETIDKLRGIVSEKTDKLSNMQ-KDLENSNAKLQEKIQELKANEHQLITLKKDVNETQKKV 1793
Cdd:PRK04778 240 ----RELVEEGYHLDHLDieKEIQDLKEQIDENLALLEELDlDEAEEKNEEIQERIDQLYDILEREVKARKYVEKNSDTL 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1794 SEMEQlkkQIKDQSLTLsKLEIENLNLAQKL-HENLEEMKSVMKERDNLRRVeetlkleRDQLKESLQETKARDLEIQQE 1872
Cdd:PRK04778 316 PDFLE---HAKEQNKEL-KEEIDRVKQSYTLnESELESVRQLEKQLESLEKQ-------YDEITERIAEQEIAYSELQEE 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1873 LKTArmlsKEHKETVDKLREKISEKTIQISDIQKDLDKSKDELQKKIQELqKKELQLLRV----KEDVNMSHKKINEMEQ 1948
Cdd:PRK04778 385 LEEI----LKQLEEIEKEQEKLSEMLQGLRKDELEAREKLERYRNKLHEI-KRYLEKSNLpglpEDYLEMFFEVSDEIEA 459
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 767930917 1949 LKKQFEAQNLSMQSVrmdnfqlTKKLHESLEEIRIVAKERDEL 1991
Cdd:PRK04778 460 LAEELEEKPINMEAV-------NRLLEEATEDVETLEEETEEL 495
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
514-949 |
2.92e-04 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 46.27 E-value: 2.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 514 YEQLRTEKEEMELKLK------EKNDLDEFEALERKTKKDQEMQ----LIHEISNLKNLVKHAEV-YNQDLENELSSKVE 582
Cdd:pfam05557 11 LSQLQNEKKQMELEHKrarielEKKASALKRQLDRESDRNQELQkrirLLEKREAEAEEALREQAeLNRLKKKYLEALNK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 583 LLREKEDQIKKLQEYIDS---------QKLENIKMDLSYSLESIEDPKQMKQTlfdaetvaLDAKRESAFLRSENLELKE 653
Cdd:pfam05557 91 KLNEKESQLADAREVISClknelselrRQIQRAELELQSTNSELEELQERLDL--------LKAKASEAEQLRQNLEKQQ 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 654 K-MKELATTYKQMENDIQLYQSQLEAKKKMQV------DLEKELQSAFNEITKLTSLIDGkvpkdllcNLELEGKITDLQ 726
Cdd:pfam05557 163 SsLAEAEQRIKELEFEIQSQEQDSEIVKNSKSelaripELEKELERLREHNKHLNENIEN--------KLLLKEEVEDLK 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 727 KELNKEveenEALREEVILLS-ELKSLPSEVERLRKEIQDKSEELhiitSEKDKLFSEVVHKESRVQGLLEEIGKTKDDL 805
Cdd:pfam05557 235 RKLERE----EKYREEAATLElEKEKLEQELQSWVKLAQDTGLNL----RSPEDLSRRIEQLQQREIVLKEENSSLTSSA 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 806 ATTQSNYKSTDQEFQNFKTLHMDFEQKYKMVLEENERMNQEIVNLSKE-------AQKFDSSLGALKT--ELSYKTQELQ 876
Cdd:pfam05557 307 RQLEKARRELEQELAQYLKKIEDLNKKLKRHKALVRRLQRRVLLLTKErdgyraiLESYDKELTMSNYspQLLERIEEAE 386
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 767930917 877 EKTREVQERLNEME----QLKEQLENRDSTLQTVEREKTLIteKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLK 949
Cdd:pfam05557 387 DMTQKMQAHNEEMEaqlsVAEEELGGYKQQAQTLERELQAL--RQQESLADPSYSKEEVDSLRRKLETLELERQRLR 461
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1146-1362 |
3.40e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.53 E-value: 3.40e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1146 VQEEMSEMQKKIN----EIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKErkvLKELQKSFETERDHLRG 1221
Cdd:COG4942 32 LQQEIAELEKELAalkkEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKE---IAELRAELEAQKEELAE 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1222 YIREIEATGLQTKEELKIahihlkeHQETIDELRRSVsektaqiintQDLEKSHTKLQEEIPVLHEEQELLPNVKEVSET 1301
Cdd:COG4942 109 LLRALYRLGRQPPLALLL-------SPEDFLDAVRRL----------QYLKYLAPARREQAEELRADLAELAALRAELEA 171
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 767930917 1302 QETMNElELLTEQSTTKDSTTLARIEMERL--RLNEKFQESQEEIKSLTKERDNLKTIKEALE 1362
Cdd:COG4942 172 ERAELE-ALLAELEEERAALEALKAERQKLlaRLEKELAELAAELAELQQEAEELEALIARLE 233
|
|
| EzrA |
pfam06160 |
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like ... |
1670-1983 |
3.74e-04 |
|
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerizes into a ring structure that establishes the location of the nascent division site. EzrA modulates the frequency and position of FtsZ ring formation. The structure contains 5 spectrin like alpha helical repeats.
Pssm-ID: 428797 [Multi-domain] Cd Length: 542 Bit Score: 46.00 E-value: 3.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1670 LTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETITRDL-----------KIQEELRI------------- 1725
Cdd:pfam06160 91 IEELLDDIEEDIKQILEELDELLESEEKNREEVEELKDKYRELRKTLLanrfsygpaidELEKQLAEieeefsqfeelte 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1726 ------AHMHLKEQQETIDKLRgivsEKTDKLSNMQKDLENsnaKLQEKIQELKANEHQLItlKKDVNETQKKV-SEMEQ 1798
Cdd:pfam06160 171 sgdyleAREVLEKLEEETDALE----ELMEDIPPLYEELKT---ELPDQLEELKEGYREME--EEGYALEHLNVdKEIQQ 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1799 LKKQIKDQSLTLSKLEIENLNLA-QKLHENLEEM-----------KSVMKERDNLRRVEETLKLERDQLKESLQETKAR- 1865
Cdd:pfam06160 242 LEEQLEENLALLENLELDEAEEAlEEIEERIDQLydllekevdakKYVEKNLPEIEDYLEHAEEQNKELKEELERVQQSy 321
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1866 -----DLEIQQELKTARmlsKEHKETVDKLREKISEKTI---QISDIQKDLDKSKDELQKKIQELQKKeLQLLRVKEDV- 1936
Cdd:pfam06160 322 tlnenELERVRGLEKQL---EELEKRYDEIVERLEEKEVaysELQEELEEILEQLEEIEEEQEEFKES-LQSLRKDELEa 397
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 767930917 1937 -NMSHKKINEMEQLKKQFEAQNLSMQSVRMDNF-----QLTKKLHESLEEIRI 1983
Cdd:pfam06160 398 rEKLDEFKLELREIKRLVEKSNLPGLPESYLDYffdvsDEIEDLADELNEVPL 450
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
1592-2533 |
4.03e-04 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 46.19 E-value: 4.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1592 KEEMKRVQEALQIERDQLKENTKEIVAKMKESQEKEYQfLKMTAVNETQEKMCEIEHL----KEQFETQKLNLENIETEN 1667
Cdd:TIGR00606 169 KALKQKFDEIFSATRYIKALETLRQVRQTQGQKVQEHQ-MELKYLKQYKEKACEIRDQitskEAQLESSREIVKSYENEL 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1668 IRLTQILHEnLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETITRDLKIQEEL--RIAHMHLKEQQETIDKLRGIvS 1745
Cdd:TIGR00606 248 DPLKNRLKE-IEHNLSKIMKLDNEIKALKSRKKQMEKDNSELELKMEKVFQGTDEQlnDLYHNHQRTVREKERELVDC-Q 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1746 EKTDKLSNMQKDLENSNAKLQEKI--QELKANEHQLITLKKDV----NETQKKVSEMEQ---LKKQIKD-QSLTLSKLEI 1815
Cdd:TIGR00606 326 RELEKLNKERRLLNQEKTELLVEQgrLQLQADRHQEHIRARDSliqsLATRLELDGFERgpfSERQIKNfHTLVIERQED 405
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1816 ENLNLAQKLHENLEEMKSVMKERDNLRrveetlkLERDQLKESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKIS 1895
Cdd:TIGR00606 406 EAKTAAQLCADLQSKERLKQEQADEIR-------DEKKGLGRTIELKKEILEKKQEELKFVIKELQQLEGSSDRILELDQ 478
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1896 EKTIQISDIQK-DLDKSKDELQKKIQELQKKELQLLRVKEDVNMSHKKINEMEQLKKQFEA----QNLSMQSVRMDNFQL 1970
Cdd:TIGR00606 479 ELRKAERELSKaEKNSLTETLKKEVKSLQNEKADLDRKLRKLDQEMEQLNHHTTTRTQMEMltkdKMDKDEQIRKIKSRH 558
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1971 TKKLHESLEEIRIVAKERDELRRIKESLKMERDQFIATLREMIARDRQNHQVKPEKRLLSDGQQHLTESLREKCSRIKEL 2050
Cdd:TIGR00606 559 SDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKLFDVCGSQDEE 638
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2051 LKrysemddhyecLNRLSLDLEKEiefQKELSMRVKANlslpYLQTKHIEKLFTANQRCSMEFHRIMKKLKYVLSYVTKI 2130
Cdd:TIGR00606 639 SD-----------LERLKEEIEKS---SKQRAMLAGAT----AVYSQFITQLTDENQSCCPVCQRVFQTEAELQEFISDL 700
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2131 KEEQHESINKFEM--DFIDEVEKQKE-LLIKIQHLQQDCDVPSRELRDLK-LNQNMDLHIEEILKDFSESEfpsikTEFQ 2206
Cdd:TIGR00606 701 QSKLRLAPDKLKSteSELKKKEKRRDeMLGLAPGRQSIIDLKEKEIPELRnKLQKVNRDIQRLKNDIEEQE-----TLLG 775
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2207 QVLSNRKEMTQFLEEWLNTRFDIEKLKNGIQKENDRICQVNNFFNNRIIAIMN-ESTEFEERSATISKEWEQDLKSLKEK 2285
Cdd:TIGR00606 776 TIMPEEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGSDLDRTVQQVNqEKQEKQHELDTVVSKIELNRKLIQDQ 855
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2286 NEKLfkNYQTLKTSLASGAQVNPTTQDNKNPHVTSRATQLTTEkIRELENSLHEAKESAMHKESKIIKMQKELEVT---- 2361
Cdd:TIGR00606 856 QEQI--QHLKSKTNELKSEKLQIGTNLQRRQQFEEQLVELSTE-VQSLIREIKDAKEQDSPLETFLEKDQQEKEELissk 932
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2362 NDIIAKLQAKVHESNKCLEKTKETIQVLQDKVALGAKPYKEEIEDLKMKLVKIDLEKMKNAKEFEKEISATKATVEYQKE 2441
Cdd:TIGR00606 933 ETSNKKAQDKVNDIKEKVKNIHGYMKDIENKIQDGKDDYLKQKETELNTVNAQLEECEKHQEKINEDMRLMRQDIDTQKI 1012
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2442 VIRLLRENLRRSQQAQDTSVISEhtdpqpsnkplTCGGGSGIVQNTKALILKSEHIRLEKEISKLKQQNEQLIKQKNELL 2521
Cdd:TIGR00606 1013 QERWLQDNLTLRKRENELKEVEE-----------ELKQHLKEMGQMQVLQMKQEHQKLEENIDLIKRNHVLALGRQKGYE 1081
|
970
....*....|..
gi 767930917 2522 SNNQHLSNEVKT 2533
Cdd:TIGR00606 1082 KEIKHFKKELRE 1093
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
935-1545 |
4.20e-04 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 46.05 E-value: 4.20e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 935 KQLQESLQIER-----DQLKsDIHDTVNMNIDTQEQLRNALESlkqHQETINTLKSKISEEVSRNLHMEENTGETKDEFQ 1009
Cdd:PRK01156 153 KILDEILEINSlernyDKLK-DVIDMLRAEISNIDYLEEKLKS---SNLELENIKKQIADDEKSHSITLKEIERLSIEYN 228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1010 QKMVGIDK-KQDLEAKNTQTLTADVKDNEIIEQQRKIFSLIQEKNELQQMLESViaeKEQLKTDLKENIEMTIENQEELR 1088
Cdd:PRK01156 229 NAMDDYNNlKSALNELSSLEDMKNRYESEIKTAESDLSMELEKNNYYKELEERH---MKIINDPVYKNRNYINDYFKYKN 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1089 LLGDELKKQQEIVAQeknhaIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELK 1168
Cdd:PRK01156 306 DIENKKQILSNIDAE-----INKYHAIIKKLSVLQKDYNDYIKKKSRYDDLNNQILELEGYEMDYNSYLKSIESLKKKIE 380
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1169 NKELTLEHMETERLELAQKLNENYEEVKSITKE-RKVLKELQ---KSFETERDHLRGYIREIE--ATGLQTKEELKIAHI 1242
Cdd:PRK01156 381 EYSKNIERMSAFISEILKIQEIDPDAIKKELNEiNVKLQDISskvSSLNQRIRALRENLDELSrnMEMLNGQSVCPVCGT 460
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1243 HLKEhqETIDELRRSVSEKTAQIINTQD-LEKSHTKLQEEIPVLHEEQELLpNVKEVSETQETMNELELLtEQSTTKDST 1321
Cdd:PRK01156 461 TLGE--EKSNHIINHYNEKKSRLEEKIReIEIEVKDIDEKIVDLKKRKEYL-ESEEINKSINEYNKIESA-RADLEDIKI 536
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1322 TLARIEMERLrlneKFQESQEEIKSLTKERDNLKtikealevKHDQLKEHIRETLAKIQESQS-KQEQSLNMKEKDNETT 1400
Cdd:PRK01156 537 KINELKDKHD----KYEEIKNRYKSLKLEDLDSK--------RTSWLNALAVISLIDIETNRSrSNEIKKQLNDLESRLQ 604
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1401 KIVSEMEQFKP-KDSALLRIEIEMLGLSKRLQESHDEMKSVAKEKDDLQRLQEVLqSESDQLKENIKEIVAKHLETEEEl 1479
Cdd:PRK01156 605 EIEIGFPDDKSyIDKSIREIENEANNLNNKYNEIQENKILIEKLRGKIDNYKKQI-AEIDSIIPDLKEITSRINDIEDN- 682
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 767930917 1480 kvahccLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLqNKIQEIYEKEEQFnIKQISEVQE 1545
Cdd:PRK01156 683 ------LKKSRKALDDAKANRARLESTIEILRTRINELSDRI-NDINETLESMKKI-KKAIGDLKR 740
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
720-1321 |
4.48e-04 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 45.80 E-value: 4.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 720 GKITDLQKELNKEVEENEALREEVILLSELKSLPSEVERLRKEIQDKSEELHIITSEKDKLfSEVV--HKESRvqgllEE 797
Cdd:PRK02224 179 ERVLSDQRGSLDQLKAQIEEKEEKDLHERLNGLESELAELDEEIERYEEQREQARETRDEA-DEVLeeHEERR-----EE 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 798 IGKTKDDLATTQSNYKSTDQEFQNFKTLHMDFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQE 877
Cdd:PRK02224 253 LETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEE 332
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 878 KTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDqlksdihdtvn 957
Cdd:PRK02224 333 CRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFG----------- 401
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 958 mniDTQEQLRNALESLKQHQETINTLKSKISeEVSRNLHMEENTGETKDEFqqkmvgidkkqdLEAKNTQTLTADVKDNE 1037
Cdd:PRK02224 402 ---DAPVDLGNAEDFLEELREERDELREREA-ELEATLRTARERVEEAEAL------------LEAGKCPECGQPVEGSP 465
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1038 I---IEQQRkifsliQEKNELQQMLESVIAEKEQLKTDLkENIEMTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGE 1114
Cdd:PRK02224 466 HvetIEEDR------ERVEELEAELEDLEEEVEEVEERL-ERAEDLVEAEDRIERLEERREDLEELIAERRETIEEKRER 538
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1115 LSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELknkeltlehmetERLELAQKLNENYEE 1194
Cdd:PRK02224 539 AEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESL------------ERIRTLLAAIADAED 606
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1195 vkSITKERKVLKELQKSFETERDHL---RGYIREIEATGLQTK-EELKIAHIHLKEHQETIDElrrsvsektaqiiNTQD 1270
Cdd:PRK02224 607 --EIERLREKREALAELNDERRERLaekRERKRELEAEFDEARiEEAREDKERAEEYLEQVEE-------------KLDE 671
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|..
gi 767930917 1271 LEKSHTKLQEEIPVLHEEQELLPNVKEVSET-QETMNELELLTEQSTTKDST 1321
Cdd:PRK02224 672 LREERDDLQAEIGAVENELEELEELRERREAlENRVEALEALYDEAEELESM 723
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
1278-1630 |
4.52e-04 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 45.88 E-value: 4.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1278 LQEEIPVLHEEQELLPNVKEVSETQETMNELELLTEQSTTKDSTTLARIE-MERLRLNEKFQESQEEIKSLTKERDNLKT 1356
Cdd:pfam17380 245 LAEDVTTMTPEYTVRYNGQTMTENEFLNQLLHIVQHQKAVSERQQQEKFEkMEQERLRQEKEEKAREVERRRKLEEAEKA 324
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1357 IKEALEVKHDQLKEHIRETLAKIQESQSKQEQSLNMKEKDNETTKIVSEMEQFKpkdsALLRIEIEMLGLSKRLQESHDE 1436
Cdd:pfam17380 325 RQAEMDRQAAIYAEQERMAMERERELERIRQEERKRELERIRQEEIAMEISRMR----ELERLQMERQQKNERVRQELEA 400
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1437 MKSVAKEKDDLQRLQEVLQSESDQLK---ENIKEIVAKHLETEEElkvahcclKEQEetinelRVNLSEKETeistiQKQ 1513
Cdd:pfam17380 401 ARKVKILEEERQRKIQQQKVEMEQIRaeqEEARQREVRRLEEERA--------REME------RVRLEEQER-----QQQ 461
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1514 LEAINDKLQNKIQEIYEKEEQFNIKQISEVQEKVNELKQFKEHRKA---KDSALQSIESKMLELTNRLQESQ-----EEI 1585
Cdd:pfam17380 462 VERLRQQEEERKRKKLELEKEKRDRKRAEEQRRKILEKELEERKQAmieEERKRKLLEKEMEERQKAIYEEErrreaEEE 541
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 767930917 1586 QIMIKEKEEMKRVQEALQI---ERDQLK--ENTKEIVAKMKESQEKEYQF 1630
Cdd:pfam17380 542 RRKQQEMEERRRIQEQMRKateERSRLEamEREREMMRQIVESEKARAEY 591
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
820-1228 |
4.66e-04 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 45.50 E-value: 4.66e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 820 QNFKTLHMDFEQKYKMVLEENE---RMNQEIVNLSKEAQKFDSSLGALKTELsyktQELQEKTREVQERLNEMEQLKEQL 896
Cdd:pfam05557 83 KYLEALNKKLNEKESQLADAREvisCLKNELSELRRQIQRAELELQSTNSEL----EELQERLDLLKAKASEAEQLRQNL 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 897 ENRDSTLQTVE-REKTLITEKLQQT--LEEVKTLTQEK---DDLKQLQESLQIERDQLKSDIHD---------------- 954
Cdd:pfam05557 159 EKQQSSLAEAEqRIKELEFEIQSQEqdSEIVKNSKSELariPELEKELERLREHNKHLNENIENklllkeevedlkrkle 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 955 ----------TVNMNIDTQEQLRNALESLKQ-HQETINT---LKSKISEEVSRNL-HMEENTGETKDEFQQKMVGIDKKQ 1019
Cdd:pfam05557 239 reekyreeaaTLELEKEKLEQELQSWVKLAQdTGLNLRSpedLSRRIEQLQQREIvLKEENSSLTSSARQLEKARRELEQ 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1020 DLEAKNTQTLTADVKDNEIIEQ----QRKIFSLIQEKNELQQMLESVIAEKEQLKTDLKENiemtienqEELRLLGDELK 1095
Cdd:pfam05557 319 ELAQYLKKIEDLNKKLKRHKALvrrlQRRVLLLTKERDGYRAILESYDKELTMSNYSPQLL--------ERIEEAEDMTQ 390
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1096 KQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNvqEEMSEMQKKINEIENLKNELKNKELTLE 1175
Cdd:pfam05557 391 KMQAHNEEMEAQLSVAEEELGGYKQQAQTLERELQALRQQESLADPSYSK--EEVDSLRRKLETLELERQRLREQKNELE 468
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 767930917 1176 hMETERLELAQKLNENYEEV-----KSITKERKVLKELQKSFETERDHLRGYIREIEA 1228
Cdd:pfam05557 469 -MELERRCLQGDYDPKKTKVlhlsmNPAAEAYQQRKNQLEKLQAEIERLKRLLKKLED 525
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
895-1118 |
4.75e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 45.21 E-value: 4.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 895 QLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIhDTVNMNIDT-QEQLRNALESL 973
Cdd:COG3883 17 QIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEI-AEAEAEIEErREELGERARAL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 974 KQHQETINTLKSKISeevSRNLhmeentgetkDEFQQKMVGIDKKQDLEAKNTQTLTADVKDNEiieqqrkifsliQEKN 1053
Cdd:COG3883 96 YRSGGSVSYLDVLLG---SESF----------SDFLDRLSALSKIADADADLLEELKADKAELE------------AKKA 150
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 767930917 1054 ELQQMLESVIAEKEQLKTDLKENIEMTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRT 1118
Cdd:COG3883 151 ELEAKLAELEALKAELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAA 215
|
|
| Spc7 |
smart00787 |
Spc7 kinetochore protein; This domain is found in cell division proteins which are required ... |
1819-1945 |
5.16e-04 |
|
Spc7 kinetochore protein; This domain is found in cell division proteins which are required for kinetochore-spindle association.
Pssm-ID: 197874 [Multi-domain] Cd Length: 312 Bit Score: 44.62 E-value: 5.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1819 NLAQKLHENLEEMKSvmkERDNLRRVEETLKLERDQLKESLQETKArdlEIQQELKTARMLSKEHKETVDKLREKISEKT 1898
Cdd:smart00787 144 GLKEGLDENLEGLKE---DYKLLMKELELLNSIKPKLRDRKDALEE---ELRQLKQLEDELEDCDPTELDRAKEKLKKLL 217
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 767930917 1899 IQISDIQKDLDKSKDELQKKIQELQKKELQLLRVKEDVNMSHKKINE 1945
Cdd:smart00787 218 QEIMIKVKKLEELEEELQELESKIEDLTNKKSELNTEIAEAEKKLEQ 264
|
|
| Spc7 |
smart00787 |
Spc7 kinetochore protein; This domain is found in cell division proteins which are required ... |
1425-1554 |
5.73e-04 |
|
Spc7 kinetochore protein; This domain is found in cell division proteins which are required for kinetochore-spindle association.
Pssm-ID: 197874 [Multi-domain] Cd Length: 312 Bit Score: 44.62 E-value: 5.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1425 GLSKRLQESHDEMKS-----------VAKEKDDLQRLQEVLQSESDQLKENIKEIVAKhleTEEELKVAHCCLKEQEETI 1493
Cdd:smart00787 144 GLKEGLDENLEGLKEdykllmkelelLNSIKPKLRDRKDALEEELRQLKQLEDELEDC---DPTELDRAKEKLKKLLQEI 220
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 767930917 1494 NELRVNLSEKETEISTIQKQLEAINDKLQ------NKIQEIYEKEEQFNIKQISEVQEKVNELKQFK 1554
Cdd:smart00787 221 MIKVKKLEELEEELQELESKIEDLTNKKSelnteiAEAEKKLEQCRGFTFKEIEKLKEQLKLLQSLT 287
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1490-1657 |
6.48e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 44.82 E-value: 6.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1490 EETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQFNI--KQISEVQEKVNEL-KQFKEHRKAKDSALQS 1566
Cdd:COG3883 15 DPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEAlqAEIDKLQAEIAEAeAEIEERREELGERARA 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1567 I--------------ESKM-------LELTNRLQESQ-EEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKMK--E 1622
Cdd:COG3883 95 LyrsggsvsyldvllGSESfsdfldrLSALSKIADADaDLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAelE 174
|
170 180 190
....*....|....*....|....*....|....*
gi 767930917 1623 SQEKEYQFLKMTAVNETQEKMCEIEHLKEQFETQK 1657
Cdd:COG3883 175 AQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAE 209
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
916-1651 |
6.62e-04 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 45.45 E-value: 6.62e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 916 KLQQTLEEVKTLTQEKDDLKQLQESlqierdqlksDIHDTVNMNIDTQEQLRNAL--ESLKQHQETINTLKSKISEEVSR 993
Cdd:COG5022 763 RYLQALKRIKKIQVIQHGFRLRRLV----------DYELKWRLFIKLQPLLSLLGsrKEYRSYLACIIKLQKTIKREKKL 832
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 994 NLHMEENTGETKDEFQQKMVgidkkqdlEAKNTQTLTADVKDNEIIEQQRKIFSLIQEK-NELQQMLESVIAEKEQLKTD 1072
Cdd:COG5022 833 RETEEVEFSLKAEVLIQKFG--------RSLKAKKRFSLLKKETIYLQSAQRVELAERQlQELKIDVKSISSLKLVNLEL 904
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1073 LKENIEMTIENQEELRLlgdELKKQQEIVAQEKNHAIKKEGELSRTCDRlaeveEKLKEKsqqlqekqqqlLNVQEEMSE 1152
Cdd:COG5022 905 ESEIIELKKSLSSDLIE---NLEFKTELIARLKKLLNNIDLEEGPSIEY-----VKLPEL-----------NKLHEVESK 965
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1153 MQKKINEIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKERKVLKElqksfeterdhlrgyiREIEATGLQ 1232
Cdd:COG5022 966 LKETSEEYEDLLKKSTILVREGNKANSELKNFKKELAELSKQYGALQESTKQLKE----------------LPVEVAELQ 1029
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1233 TkEELKIAHIHLKEHQET-IDELRRsvsektaqiintqDLEKSHTKLQEEIPVLHEEQELLPNVKEVSETQET----MNE 1307
Cdd:COG5022 1030 S-ASKIISSESTELSILKpLQKLKG-------------LLLLENNQLQARYKALKLRRENSLLDDKQLYQLEStenlLKT 1095
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1308 LELLTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLK-----EHIRETLAKIQES 1382
Cdd:COG5022 1096 INVKDLEVTNRNLVKPANVLQFIVAQMIKLNLLQEISKFLSQLVNTLEPVFQKLSVLQLELDglfweANLEALPSPPPFA 1175
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1383 QSKQEQSLNMKEKDNETTKIVSEMEQFKPKDSALLRIEIEMLGLSKRLQEShdemksvAKEKDDLQRLQEVLQSESDQLK 1462
Cdd:COG5022 1176 ALSEKRLYQSALYDEKSKLSSSEVNDLKNELIALFSKIFSGWPRGDKLKKL-------ISEGWVPTEYSTSLKGFNNLNK 1248
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1463 ENIKEIVAKHLETEEELKVAHCCLKEQEEtinelrvnlsEKETEISTIQKQLEAINDKLQNkiqEIYEKEEQFNIKQISE 1542
Cdd:COG5022 1249 KFDTPASMSNEKLLSLLNSIDNLLSSYKL----------EEEVLPATINSLLQYINVGLFN---ALRTKASSLRWKSATE 1315
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1543 VQEKVNELKQFKEHRKAKDSALQSIEskmleltnrLQESQEEIQIMIKEKEEMKRV----QEALQIERDQLKEN------ 1612
Cdd:COG5022 1316 VNYNSEELDDWCREFEISDVDEELEE---------LIQAVKVLQLLKDDLNKLDELldacYSLNPAEIQNLKSRydpadk 1386
|
730 740 750 760
....*....|....*....|....*....|....*....|...
gi 767930917 1613 ----TKEIVAKMKESQEKEYQFLKMTAVNETQEKMCEIEHLKE 1651
Cdd:COG5022 1387 ennlPKEILKKIEALLIKQELQLSLEGKDETEVHLSEIFSEEK 1429
|
|
| COG1340 |
COG1340 |
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]; |
1679-1954 |
7.03e-04 |
|
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown];
Pssm-ID: 440951 [Multi-domain] Cd Length: 297 Bit Score: 44.13 E-value: 7.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1679 EEMRSVTKERDDLRSVEETLKVERDQLKENLRETITRDLKIQEELRIahmhLKEQQETIDKLRGIVSEKTDKLSNMQKDL 1758
Cdd:COG1340 8 SSLEELEEKIEELREEIEELKEKRDELNEELKELAEKRDELNAQVKE----LREEAQELREKRDELNEKVKELKEERDEL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1759 ENSNAKLQEKIQELKANEHQLITLKKDVNETQKkvsEMEQLKKQIKDQSLTLSKlEIENLNLAQKLHENLEEMKSVMKER 1838
Cdd:COG1340 84 NEKLNELREELDELRKELAELNKAGGSIDKLRK---EIERLEWRQQTEVLSPEE-EKELVEKIKELEKELEKAKKALEKN 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1839 DNLRRVEETLKLERDQLKESLQETKARDLEIQQelKTARMLSKehKETVDKLREKISEKTIQISDIQKDLD---KSKDEL 1915
Cdd:COG1340 160 EKLKELRAELKELRKEAEEIHKKIKELAEEAQE--LHEEMIEL--YKEADELRKEADELHKEIVEAQEKADelhEEIIEL 235
|
250 260 270
....*....|....*....|....*....|....*....
gi 767930917 1916 QKKIQELQkKELQLLRVKEDVNMSHKKINEMEQLKKQFE 1954
Cdd:COG1340 236 QKELRELR-KELKKLRKKQRALKREKEKEELEEKAEEIF 273
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
790-1228 |
7.46e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 45.33 E-value: 7.46e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 790 RVQGLLEEIGKTKDDLATTQSNYkstdQEFQNFKTLHMDFEQKYKMVLEENERMNQEIVnLSKEAQKFdSSLGALKTElS 869
Cdd:PRK04863 234 DMEAALRENRMTLEAIRVTQSDR----DLFKHLITESTNYVAADYMRHANERRVHLEEA-LELRRELY-TSRRQLAAE-Q 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 870 YKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLI----------TEKLQQTLEEVKTLTQEKDDLKQLQE 939
Cdd:PRK04863 307 YRLVEMARELAELNEAESDLEQDYQAASDHLNLVQTALRQQEKIeryqadleelEERLEEQNEVVEEADEQQEENEARAE 386
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 940 SLQIERDQLKSDIHDtVNMNIDTQE----QLRNALESLKQHQE-------TINTLKSKISEEVSRnlhmEENTGETKDEF 1008
Cdd:PRK04863 387 AAEEEVDELKSQLAD-YQQALDVQQtraiQYQQAVQALERAKQlcglpdlTADNAEDWLEEFQAK----EQEATEELLSL 461
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1009 QQKMVGIDKKQDLEAKNTQTLTADVKDNEIIEQQRKIFSLIQEKNELQQMLESViaekEQLKTDLKEnIEMTIENQEELR 1088
Cdd:PRK04863 462 EQKLSVAQAAHSQFEQAYQLVRKIAGEVSRSEAWDVARELLRRLREQRHLAEQL----QQLRMRLSE-LEQRLRQQQRAE 536
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1089 LLGDELKKQqeivaqeknhaikkegeLSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELK 1168
Cdd:PRK04863 537 RLLAEFCKR-----------------LGKNLDDEDELEQLQEELEARLESLSESVSEARERRMALRQQLEQLQARIQRLA 599
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 767930917 1169 NKElTLEHMETERLE-LAQKLNENYEEVKSITKERKVLKELQKSFETERDHLRGYIREIEA 1228
Cdd:PRK04863 600 ARA-PAWLAAQDALArLREQSGEEFEDSQDVTEYMQQLLERERELTVERDELAARKQALDE 659
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
452-990 |
7.47e-04 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 45.10 E-value: 7.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 452 KLSINLLREIDES--VCSESDVFSNTLDTLSEIEWNPATKLLNQENIESELNSLRADYDN----LVLDYEQLRTEKE--E 523
Cdd:pfam05483 131 KVSLKLEEEIQENkdLIKENNATRHLCNLLKETCARSAEKTKKYEYEREETRQVYMDLNNniekMILAFEELRVQAEnaR 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 524 MELKLKEKNDLDEFEALERKTKKdqemqlihEISNLKNLVKHAEVYNQDLENELSSKVELLREKEDQIKKLQEYIDSQKl 603
Cdd:pfam05483 211 LEMHFKLKEDHEKIQHLEEEYKK--------EINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKANQLEEKTKLQD- 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 604 ENIKmdlsyslESIEDPKQMKQTLFDaetvaldakresaflrsenleLKEKMKELATTYKQMENDIQLyqsqlEAKKKMQ 683
Cdd:pfam05483 282 ENLK-------ELIEKKDHLTKELED---------------------IKMSLQRSMSTQKALEEDLQI-----ATKTICQ 328
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 684 VDLEKELQSAFNEITKLTSLIDGKVPKDLLCNLElegkitDLQKELNKEVEENEalREEVILLSELKSLPSEVERLRKEI 763
Cdd:pfam05483 329 LTEEKEAQMEELNKAKAAHSFVVTEFEATTCSLE------ELLRTEQQRLEKNE--DQLKIITMELQKKSSELEEMTKFK 400
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 764 QDKS---EELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEFQNFKTLHMDFEQKYKMVLEEN 840
Cdd:pfam05483 401 NNKEvelEELKKILAEDEKLLDEKKQFEKIAEELKGKEQELIFLLQAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKTEL 480
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 841 ERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQT 920
Cdd:pfam05483 481 EKEKLKNIELTAHCDKLLLENKELTQEASDMTLELKKHQEDIINCKKQEERMLKQIENLEEKEMNLRDELESVREEFIQK 560
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 921 LEEVKTLTQEKDDLKQLQESLQIERDQLKSDIHDTVNmniDTQEQLRNALESLKQHQETINTLKSKISEE 990
Cdd:pfam05483 561 GDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCN---NLKKQIENKNKNIEELHQENKALKKKGSAE 627
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
758-1849 |
7.65e-04 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 45.17 E-value: 7.65e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 758 RLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQ---EFQNFKTLHMDFEQKYK 834
Cdd:pfam01576 2 RQEEEMQAKEEELQKVKERQQKAESELKELEKKHQQLCEEKNALQEQLQAETELCAEAEEmraRLAARKQELEEILHELE 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 835 MVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQtveREKTLIT 914
Cdd:pfam01576 82 SRLEEEEERSQQLQNEKKKMQQHIQDLEEQLDEEEAARQKLQLEKVTTEAKIKKLEEDILLLEDQNSKLS---KERKLLE 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 915 EKLQqtlEEVKTLTQEKDDLKQLQEsLQIERDQLKSDIHDtvnmNIDTQEQLRNALESLKQHQE-TINTLKSKISEEVSR 993
Cdd:pfam01576 159 ERIS---EFTSNLAEEEEKAKSLSK-LKNKHEAMISDLEE----RLKKEEKGRQELEKAKRKLEgESTDLQEQIAELQAQ 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 994 NLHMEENTGETKDEFQQKMVGIDKKQdlEAKNTQTLTADVKDNEIIEQQRKIFSLIQEKNELQQMLESVIAEKEQLKTDL 1073
Cdd:pfam01576 231 IAELRAQLAKKEEELQAALARLEEET--AQKNNALKKIRELEAQISELQEDLESERAARNKAEKQRRDLGEELEALKTEL 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1074 KENIEMTIENQEELRLLGDELKKQQEIVAQE-KNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSE 1152
Cdd:pfam01576 309 EDTLDTTAAQQELRSKREQEVTELKKALEEEtRSHEAQLQEMRQKHTQALEELTEQLEQAKRNKANLEKAKQALESENAE 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1153 MQKKINEIENLKNElknkeltlehMETERLELAQKLNENYEEVKSITKERKVLKELQKSFETERDHLRGYIREIEATGLQ 1232
Cdd:pfam01576 389 LQAELRTLQQAKQD----------SEHKRKKLEGQLQELQARLSESERQRAELAEKLSKLQSELESVSSLLNEAEGKNIK 458
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1233 TKEELKIAHIHLKEHQETIDELRRsvsEKTAQIINTQDLEKSHTKLQEEipvLHEEQELLPNV-KEVSETQETMNELELL 1311
Cdd:pfam01576 459 LSKDVSSLESQLQDTQELLQEETR---QKLNLSTRLRQLEDERNSLQEQ---LEEEEEAKRNVeRQLSTLQAQLSDMKKK 532
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1312 TEQsttkDSTTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQL---KEHIRETLAKIQESQSKQEQ 1388
Cdd:pfam01576 533 LEE----DAGTLEALEEGKKRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQELDDLlvdLDHQRQLVSNLEKKQKKFDQ 608
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1389 SLnmKEKDNETTKIVSEMEQfkpKDSALLRIEIEMLGLSKRLQESHDEmksvakeKDDLQRLQEVLQSESDQLKENIKEI 1468
Cdd:pfam01576 609 ML--AEEKAISARYAEERDR---AEAEAREKETRALSLARALEEALEA-------KEELERTNKQLRAEMEDLVSSKDDV 676
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1469 VAKHLETEEELKVAHCCLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQFNIKQISEVQEKVN 1548
Cdd:pfam01576 677 GKNVHELERSKRALEQQVEEMKTQLEELEDELQATEDAKLRLEVNMQALKAQFERDLQARDEQGEEKRRQLVKQVRELEA 756
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1549 ELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKMKESQEKey 1628
Cdd:pfam01576 757 ELEDERKQRAQAVAAKKKLELDLKELEAQIDAANKGREEAVKQLKKLQAQMKDLQRELEEARASRDEILAQSKESEKK-- 834
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1629 qflkmtavnetqekmceiehlkeqfetqklnLENIETENIRLTQILHENLEEMRSVTKERDDLRsveetlkverDQLKE- 1707
Cdd:pfam01576 835 -------------------------------LKNLEAELLQLQEDLAASERARRQAQQERDELA----------DEIASg 873
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1708 NLRETITRDLKIQEELRIAHMhlkeqQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDVN 1787
Cdd:pfam01576 874 ASGKSALQDEKRRLEARIAQL-----EEELEEEQSNTELLNDRLRKSTLQVEQLTTELAAERSTSQKSESARQQLERQNK 948
|
1050 1060 1070 1080 1090 1100
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 767930917 1788 ETQKKVSEMEQLKKQikDQSLTLSKLEIENLNLAQKLHENLEEMKSVMKerdNLRRVEETLK 1849
Cdd:pfam01576 949 ELKAKLQEMEGTVKS--KFKSSIAALEAKIAQLEEQLEQESRERQAANK---LVRRTEKKLK 1005
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
1500-2514 |
8.43e-04 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 45.04 E-value: 8.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1500 LSEKETEISTIQKQLEAIN----DKLQNKIQEIYEKEEQFNIK---QISEVQEKVNelkqfKEHRKAKDSALQSIESKML 1572
Cdd:TIGR01612 651 LKNKDKIYSTIKSELSKIYeddiDALYNELSSIVKENAIDNTEdkaKLDDLKSKID-----KEYDKIQNMETATVELHLS 725
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1573 ELTNRLQESQEEIQIMikEKEEMKRVQEALQIERDQLKENTKEIVAKMKESQEKEYQflkmtaVNETQEKMCEIehlKEQ 1652
Cdd:TIGR01612 726 NIENKKNELLDIIVEI--KKHIHGEINKDLNKILEDFKNKEKELSNKINDYAKEKDE------LNKYKSKISEI---KNH 794
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1653 FETQkLNLENIETENIRltQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETITRDLKIQEELRIAHMHLKE 1732
Cdd:TIGR01612 795 YNDQ-INIDNIKDEDAK--QNYDKSKEYIKTISIKEDEIFKIINEMKFMKDDFLNKVDKFINFENNCKEKIDSEHEQFAE 871
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1733 qqeTIDKLRGIVSEktDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKK-----DVNETQKKVSEMEQLKKQIKDQS 1807
Cdd:TIGR01612 872 ---LTNKIKAEISD--DKLNDYEKKFNDSKSLINEINKSIEEEYQNINTLKKvdeyiKICENTKESIEKFHNKQNILKEI 946
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1808 LTLSKLEIENLNLAQKLHENLEEmKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKTARMLSK---EHK 1884
Cdd:TIGR01612 947 LNKNIDTIKESNLIEKSYKDKFD-NTLIDKINELDKAFKDASLNDYEAKNNELIKYFNDLKANLGKNKENMLYHqfdEKE 1025
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1885 ETVDKLREKISEKTIQISDIQKDLDKSKDELQKKIQELQKKELQLL--RVKEDVNMSHKKINEMEQLKKQFEAQNLsmqs 1962
Cdd:TIGR01612 1026 KATNDIEQKIEDANKNIPNIEIAIHTSIYNIIDEIEKEIGKNIELLnkEILEEAEINITNFNEIKEKLKHYNFDDF---- 1101
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1963 VRMDNFQLTKKLHESLEEIRIVAKERDELRRIKESLKMERDQFIATLREMIARDRQnhqvKPEKRLLSDGQQHLTESLRE 2042
Cdd:TIGR01612 1102 GKEENIKYADEINKIKDDIKNLDQKIDHHIKALEEIKKKSENYIDEIKAQINDLED----VADKAISNDDPEEIEKKIEN 1177
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2043 KCSRIKELLKRYSEMDDHYECLNRLSLDlEKEIEFQKELSMRVKANLSLPYLQTKHIEKLFTANQRCSMEfhRIMKKLKY 2122
Cdd:TIGR01612 1178 IVTKIDKKKNIYDEIKKLLNEIAEIEKD-KTSLEEVKGINLSYGKNLGKLFLEKIDEEKKKSEHMIKAME--AYIEDLDE 1254
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2123 VLSYVTKIKEEQH-ESINKFEMDF--IDEVEKQKELLIKIQHLQQDCDVPSRELRdlklnqnmdlhieeILKDFS-ESEF 2198
Cdd:TIGR01612 1255 IKEKSPEIENEMGiEMDIKAEMETfnISHDDDKDHHIISKKHDENISDIREKSLK--------------IIEDFSeESDI 1320
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2199 PSIKTEFQQVLSNRKEMTQFLEEWLNtrfdieklkngiqkendricQVNNFFN----NRIIAIMNESTEFEERSatisKE 2274
Cdd:TIGR01612 1321 NDIKKELQKNLLDAQKHNSDINLYLN--------------------EIANIYNilklNKIKKIIDEVKEYTKEI----EE 1376
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2275 WEQDLKSLKEKNEKLFK------NYQTLKTSLAS---GAQVNPTTQDNK--NPHVTSRATQLTTEKIRELENS-----LH 2338
Cdd:TIGR01612 1377 NNKNIKDELDKSEKLIKkikddiNLEECKSKIEStldDKDIDECIKKIKelKNHILSEESNIDTYFKNADENNenvllLF 1456
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2339 EAKESAMHKESKIIKMQKElEVTNDI---IAKLQAKVHESNKC-LEKTKETIQVLQDKVALgaKPYKEEIEDLKMKLVKI 2414
Cdd:TIGR01612 1457 KNIEMADNKSQHILKIKKD-NATNDHdfnINELKEHIDKSKGCkDEADKNAKAIEKNKELF--EQYKKDVTELLNKYSAL 1533
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2415 dlekmknakEFEKEISATKATVEyqkEVIRLLREnlrrsqqAQDTSVISEHTDPQPSNKpltcgggsgivqntkaliLKS 2494
Cdd:TIGR01612 1534 ---------AIKNKFAKTKKDSE---IIIKEIKD-------AHKKFILEAEKSEQKIKE------------------IKK 1576
|
1050 1060
....*....|....*....|
gi 767930917 2495 EHIRLEKEISKLKQQNEQLI 2514
Cdd:TIGR01612 1577 EKFRIEDDAAKNDKSNKAAI 1596
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
346-798 |
9.91e-04 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 44.72 E-value: 9.91e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 346 KRYRKEIMDLKKQLEEVSLETRAQAMEKDQLAQ-----------LL-----EEKDL-LQKVQNEKIENLTrmlvTSSSLT 408
Cdd:pfam15921 338 RMYEDKIEELEKQLVLANSELTEARTERDQFSQesgnlddqlqkLLadlhkREKELsLEKEQNKRLWDRD----TGNSIT 413
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 409 LQ-------------QELKAKRKRRVTWCLGKINKMKNSNYADQFNIpTNITTKTHKL--SINLLREIDESVCSESDVFS 473
Cdd:pfam15921 414 IDhlrrelddrnmevQRLEALLKAMKSECQGQMERQMAAIQGKNESL-EKVSSLTAQLesTKEMLRKVVEELTAKKMTLE 492
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 474 NTLDTLSEIEWNPATKLLNQENIESELNSLRADYDNLVLDYEQLRTEKEEMelklkeKNDLDEFEALE-RKTKKDQEMQL 552
Cdd:pfam15921 493 SSERTVSDLTASLQEKERAIEATNAEITKLRSRVDLKLQELQHLKNEGDHL------RNVQTECEALKlQMAEKDKVIEI 566
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 553 I-HEISNLKNLVKH-------AEVYNQDLENELSSK------VELLREKED-QIKKLQEYIDSQKLENIKM--DLSYSLE 615
Cdd:pfam15921 567 LrQQIENMTQLVGQhgrtagaMQVEKAQLEKEINDRrlelqeFKILKDKKDaKIRELEARVSDLELEKVKLvnAGSERLR 646
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 616 SIEDPKQMK-QTLFDAETVALDAKRESAFLRSENLELKEKMKELATTYKQMENDIQLYQSQLEAKKKMQVDLEKElqsaf 694
Cdd:pfam15921 647 AVKDIKQERdQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELEQTRNTLKSMEGS----- 721
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 695 neitkltsliDGKVPKDLLcnlelegkitDLQKELNKEVEENEALREEVILLSELKSLPSEVERLRKEIQDK-SEELHII 773
Cdd:pfam15921 722 ----------DGHAMKVAM----------GMQKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKlSQELSTV 781
|
490 500
....*....|....*....|....*
gi 767930917 774 TSEKDKLFSEVVHKESRVQGLLEEI 798
Cdd:pfam15921 782 ATEKNKMAGELEVLRSQERRLKEKV 806
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
470-1101 |
1.02e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 44.65 E-value: 1.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 470 DVFSNTLDTLSEIEWNPATKllNQENIESELNSLRADYDNLVLDYEQLRTEKEEMELKLKEKNdldefEALERKTKKDQE 549
Cdd:PRK02224 180 RVLSDQRGSLDQLKAQIEEK--EEKDLHERLNGLESELAELDEEIERYEEQREQARETRDEAD-----EVLEEHEERREE 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 550 MQ-LIHEISNLKNLVKHAEVYNQDLENELSSKVELLREKEDQIKKLQ-----EYIDSQKLENIKMDLSYSLESIEDPKQM 623
Cdd:PRK02224 253 LEtLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLaeaglDDADAEAVEARREELEDRDEELRDRLEE 332
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 624 KQTLFDAETVALDAKRESAF-LRSENLELKEKMKELATTYKQMENDIQLYQSQLEAKKKMQVDLEKELQSAFNEITKLTS 702
Cdd:PRK02224 333 CRVAAQAHNEEAESLREDADdLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAED 412
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 703 LIDgkvpkDLLCNL-ELEGKITDLQ---KELNKEVEENEALREEvillselkslpsevERLRKEIQDKSEELHIITSEKD 778
Cdd:PRK02224 413 FLE-----ELREERdELREREAELEatlRTARERVEEAEALLEA--------------GKCPECGQPVEGSPHVETIEED 473
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 779 KlfsevvhkesrvqgllEEIGKTKDDLATTQsnykstdqefqnfktlhmdfeqkykmvlEENERMNQEIvNLSKEAQKFD 858
Cdd:PRK02224 474 R----------------ERVEELEAELEDLE----------------------------EEVEEVEERL-ERAEDLVEAE 508
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 859 SSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQ 938
Cdd:PRK02224 509 DRIERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERI 588
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 939 ESLQIERDQLksdihdtvnmniDTQEQLRNALESLKQHQETINtlkskiseevsrnlhmEENTgETKDEFQQKMvgiDKK 1018
Cdd:PRK02224 589 ESLERIRTLL------------AAIADAEDEIERLREKREALA----------------ELND-ERRERLAEKR---ERK 636
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1019 QDLEAKntqtltadvKDNEIIEQQRkifsliQEKNELQQMLESV---IAEKEQLKTDLKENIEMTIENQEELRLLGDELK 1095
Cdd:PRK02224 637 RELEAE---------FDEARIEEAR------EDKERAEEYLEQVeekLDELREERDDLQAEIGAVENELEELEELRERRE 701
|
....*.
gi 767930917 1096 KQQEIV 1101
Cdd:PRK02224 702 ALENRV 707
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1737-1896 |
1.11e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 42.99 E-value: 1.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1737 IDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQLKKQIKD--QSLTLSKlE 1814
Cdd:COG1579 19 LDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNnkEYEALQK-E 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1815 IENLNLAQKLHEnlEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKTARmlsKEHKETVDKLREKI 1894
Cdd:COG1579 98 IESLKRRISDLE--DEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAEL---EELEAEREELAAKI 172
|
..
gi 767930917 1895 SE 1896
Cdd:COG1579 173 PP 174
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
1794-2019 |
1.15e-03 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 44.35 E-value: 1.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1794 SEMEQLKKQIKDQSLTLSKLEIENLNLAQKLHENLEEMKSVMKE-RDNLRRVEETLKLERDQLKESLQETKARdleiQQE 1872
Cdd:pfam05557 9 ARLSQLQNEKKQMELEHKRARIELEKKASALKRQLDRESDRNQElQKRIRLLEKREAEAEEALREQAELNRLK----KKY 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1873 LKTARMLSKEHKETVDKLREKISEKTIQISDIQKdldkskdELQKKIQELQKKELQLLRVKEDVNMSHKKINEMEQLKKQ 1952
Cdd:pfam05557 85 LEALNKKLNEKESQLADAREVISCLKNELSELRR-------QIQRAELELQSTNSELEELQERLDLLKAKASEAEQLRQN 157
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 767930917 1953 FEAQNLSMQSVRMDNFQLTKKLHESLEEIRIVAKERDELRRIKEslkMERDqfIATLREMIARDRQN 2019
Cdd:pfam05557 158 LEKQQSSLAEAEQRIKELEFEIQSQEQDSEIVKNSKSELARIPE---LEKE--LERLREHNKHLNEN 219
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
1730-2426 |
1.16e-03 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 44.72 E-value: 1.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1730 LKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDVNETQK--------KVSEMEQlKK 1801
Cdd:pfam15921 80 LEEYSHQVKDLQRRLNESNELHEKQKFYLRQSVIDLQTKLQEMQMERDAMADIRRRESQSQEdlrnqlqnTVHELEA-AK 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1802 QIKDQSLTLSKLEIENLNLAQKLHEN-LEEMKSVM-----------KERDNL-----RRVEETLKLERDQLKESLQETKA 1864
Cdd:pfam15921 159 CLKEDMLEDSNTQIEQLRKMMLSHEGvLQEIRSILvdfeeasgkkiYEHDSMstmhfRSLGSAISKILRELDTEISYLKG 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1865 RDLEIQQELKTARMLSKEHKETV-----DKLREKISEKTIQISDIQKDLDKSKDE---LQKKIQELQKKelqllrVKEDV 1936
Cdd:pfam15921 239 RIFPVEDQLEALKSESQNKIELLlqqhqDRIEQLISEHEVEITGLTEKASSARSQansIQSQLEIIQEQ------ARNQN 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1937 NMSHKKINEMEQLKKQFEAQNLSMQSVRMDNFQ-LTKKLHESLEEIRIVAKERDELRRIKESLKMERDQFIATL----RE 2011
Cdd:pfam15921 313 SMYMRQLSDLESTVSQLRSELREAKRMYEDKIEeLEKQLVLANSELTEARTERDQFSQESGNLDDQLQKLLADLhkreKE 392
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2012 MIARDRQNHQVKPEKRLLSDGQQHLTESLREK---CSRIKELLKRYS-----EMDDHYECLNRLSLDLEKEIEFQKELSm 2083
Cdd:pfam15921 393 LSLEKEQNKRLWDRDTGNSITIDHLRRELDDRnmeVQRLEALLKAMKsecqgQMERQMAAIQGKNESLEKVSSLTAQLE- 471
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2084 rvkanlSLPYLQTKHIEKLfTANQRCSMEFHRIMKKLKYVLSYVTKIKEEQHESINKFEMDF---IDEVEKQKELLIKIQ 2160
Cdd:pfam15921 472 ------STKEMLRKVVEEL-TAKKMTLESSERTVSDLTASLQEKERAIEATNAEITKLRSRVdlkLQELQHLKNEGDHLR 544
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2161 HLQQDCDVpsrelrdLKLNQNMDLHIEEILKDFSESEFPSIKTEFQQVLSNRKEMTQFLEEWLNTRFDIEKLKNGIQKEN 2240
Cdd:pfam15921 545 NVQTECEA-------LKLQMAEKDKVIEILRQQIENMTQLVGQHGRTAGAMQVEKAQLEKEINDRRLELQEFKILKDKKD 617
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2241 DRICQVNNFFNN---RIIAIMNESTEFEERSATISKEWEQDLKSLKE-KNE--KLFKNYQTLKTSLASGAQVNPTTQDNK 2314
Cdd:pfam15921 618 AKIRELEARVSDlelEKVKLVNAGSERLRAVKDIKQERDQLLNEVKTsRNElnSLSEDYEVLKRNFRNKSEEMETTTNKL 697
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2315 NPHVTSRATQLttekiRELENSLHEAKESAMHKESKIIKMQKELEVTNDIIAKLQAKVHESNKCLEKTKETIQVLqdkva 2394
Cdd:pfam15921 698 KMQLKSAQSEL-----EQTRNTLKSMEGSDGHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFL----- 767
|
730 740 750
....*....|....*....|....*....|..
gi 767930917 2395 lgakpyKEEIEDLKMKLVKIDLEKMKNAKEFE 2426
Cdd:pfam15921 768 ------KEEKNKLSQELSTVATEKNKMAGELE 793
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1050-1290 |
1.18e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.98 E-value: 1.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1050 QEKNELQQMLESVIAEKEQLKTDLKENIEMTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKL 1129
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1130 KEKsqqlqekqqqLLNVQEEMSEMQkKINEIENLKNELKNKEltLEHMETERLELAQKLNENYEEVKSITKERKVLKELQ 1209
Cdd:COG4942 100 EAQ----------KEELAELLRALY-RLGRQPPLALLLSPED--FLDAVRRLQYLKYLAPARREQAEELRADLAELAALR 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1210 KSFETERDHLRGYIREIEatglQTKEELKIAhihLKEHQETIDELRRSVSEKTAQIintQDLEKSHTKLQEEIPVLHEEQ 1289
Cdd:COG4942 167 AELEAERAELEALLAELE----EERAALEAL---KAERQKLLARLEKELAELAAEL---AELQQEAEELEALIARLEAEA 236
|
.
gi 767930917 1290 E 1290
Cdd:COG4942 237 A 237
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
737-992 |
1.21e-03 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 44.12 E-value: 1.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 737 EALREEVILLSELKSLPSEVERLRKEIQDKSEELHIITSEKdklfsevvhkESRVQGLLEEIGKTKDDlattqsnykstd 816
Cdd:pfam07888 38 ECLQERAELLQAQEAANRQREKEKERYKRDREQWERQRREL----------ESRVAELKEELRQSREK------------ 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 817 qefqnfktlHMDFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKtelsyktQELQEKTREVQERLNEMEQLKEQL 896
Cdd:pfam07888 96 ---------HEELEEKYKELSASSEELSEEKDALLAQRAAHEARIRELE-------EDIKTLTQRVLERETELERMKERA 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 897 ENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDI----------HDTVNMNIDTQEQL 966
Cdd:pfam07888 160 KKAGAQRKEEEAERKQLQAKLQQTEEELRSLSKEFQELRNSLAQRDTQVLQLQDTIttltqklttaHRKEAENEALLEEL 239
|
250 260
....*....|....*....|....*.
gi 767930917 967 RNALESLKQHQETINTLKSKISEEVS 992
Cdd:pfam07888 240 RSLQERLNASERKVEGLGEELSSMAA 265
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
737-1229 |
1.29e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 44.52 E-value: 1.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 737 EALREEVILLSELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVhkESRVQGLLEEIGKTKDDLATTQSNYKSTD 816
Cdd:COG4913 245 EDAREQIELLEPIRELAERYAAARERLAELEYLRAALRLWFAQRRLELL--EAELEELRAELARLEAELERLEARLDALR 322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 817 QEFQNFKTLHMDFEQKYKMVLE-ENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQ 895
Cdd:COG4913 323 EELDELEAQIRGNGGDRLEQLErEIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEALEEELEA 402
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 896 LENRDSTLQTverektliteKLQQTLEEVKTLTQEKDDLKQLQ-----ESLQIeRDQLKSDI-HDTVNMNI--------D 961
Cdd:COG4913 403 LEEALAEAEA----------ALRDLRRELRELEAEIASLERRKsnipaRLLAL-RDALAEALgLDEAELPFvgelievrP 471
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 962 TQEQLRNALESL---------------KQHQETINTLKSK---ISEEVSRNLHMEENTGETKDEFQQKMVGIDKK----- 1018
Cdd:COG4913 472 EEERWRGAIERVlggfaltllvppehyAAALRWVNRLHLRgrlVYERVRTGLPDPERPRLDPDSLAGKLDFKPHPfrawl 551
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1019 -------------QDLEA-KNTQ---TLTADVKDN----------EIIEQ-------QRKIFSLIQEKNELQQMLESVIA 1064
Cdd:COG4913 552 eaelgrrfdyvcvDSPEElRRHPraiTRAGQVKGNgtrhekddrrRIRSRyvlgfdnRAKLAALEAELAELEEELAEAEE 631
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1065 EKEQLKTDLKENiemtienQEELRLLGDELKKQQEIV----AQEKNHAIKKE-GELSRTCDRLAEVEEKLKEKSQQLQEK 1139
Cdd:COG4913 632 RLEALEAELDAL-------QERREALQRLAEYSWDEIdvasAEREIAELEAElERLDASSDDLAALEEQLEELEAELEEL 704
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1140 QQQLLNVQEEMSEMQKKINEIENLKNELKNKELTLEhmETERLELAQKLNENYEEVKSITKERKVLKELQKSFETERDHL 1219
Cdd:COG4913 705 EEELDELKGEIGRLEKELEQAEEELDELQDRLEAAE--DLARLELRALLEERFAAALGDAVERELRENLEERIDALRARL 782
|
570
....*....|
gi 767930917 1220 RGYIREIEAT 1229
Cdd:COG4913 783 NRAEEELERA 792
|
|
| HEC1 |
COG5185 |
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell ... |
1307-1589 |
1.49e-03 |
|
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 444066 [Multi-domain] Cd Length: 594 Bit Score: 43.79 E-value: 1.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1307 ELELLTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKER-DNLKTIKEALEVKHDQLKEHIRETLAKIQESQSK 1385
Cdd:COG5185 232 EEALKGFQDPESELEDLAQTSDKLEKLVEQNTDLRLEKLGENAESsKRLNENANNLIKQFENTKEKIAEYTKSIDIKKAT 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1386 QEQSLNMKEKDNETTKIVSEMEQFKPKDSALLRIEIEMLGLSKRLQESHDEMKSVAKEKdDLQRLQEVLQSESDQLKENI 1465
Cdd:COG5185 312 ESLEEQLAAAEAEQELEESKRETETGIQNLTAEIEQGQESLTENLEAIKEEIENIVGEV-ELSKSSEELDSFKDTIESTK 390
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1466 KEIVAKHLETEEELKVAhccLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQFNIKQISEVQE 1545
Cdd:COG5185 391 ESLDEIPQNQRGYAQEI---LATLEDTLKAADRQIEELQRQIEQATSSNEEVSKLLNELISELNKVMREADEESQSRLEE 467
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 767930917 1546 KVNELKQFKEHRKAK-DSALQSIESKMLELTNRLQESQEEIQIMI 1589
Cdd:COG5185 468 AYDEINRSVRSKKEDlNEELTQIESRVSTLKATLEKLRAKLERQL 512
|
|
| ATG17_like |
pfam04108 |
Autophagy protein ATG17-like domain; This domain is found in the autophagy-related proteins ... |
1767-2064 |
1.52e-03 |
|
Autophagy protein ATG17-like domain; This domain is found in the autophagy-related proteins ATG17 and ATG11, conserved across eukaryotes. ATG17 forms a complex with ATG29 and ATG31, critical for both PAS (preautophagosomal structure) formation and autophagy. Together with ATG13, it is required for ATG1 kinase activation. ATG11 is a scaffold protein required for the cytoplasm-to-vacuole targeting (Cvt) pathway during starvation and to recruit ATG proteins to the pre-autophagosome. It is also required for ATG1 kinase activation. In many eukaryotes, ATG11 (the orthologue in mammals is RB1-inducible coiled-coil protein 1 (RB1CC1) and in S. pombe is Taz1-interacting factor 1 (taf1)) is essential for bulk autophagy, except in S.cerevisiae. ATG17 and ATG11 are large similar proteins, both predicted to be almost entirely helical, containing conserved coiled-coil regions and lack obvious functional motifs.
Pssm-ID: 427715 [Multi-domain] Cd Length: 360 Bit Score: 43.53 E-value: 1.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1767 EKIQELKANEHQLITL-KKDVNETQKKVSEMEQLKKQIKDQSLTLSKLeieNLNLAQKLHENLEEMKSVMKERDNL-RRV 1844
Cdd:pfam04108 3 SSAQDLCRWANELLTDaRSLLEELVVLLAKIAFLRRGLSVQLANLEKV---REGLEKVLNELKKDFKQLLKDLDAAlERL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1845 EETLklerdqlkESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKDLDKSKDELQKKIQELQK 1924
Cdd:pfam04108 80 EETL--------DKLRNTPVEPALPPGEEKQKTLLDFIDEDSVEILRDALKELIDELQAAQESLDSDLKRFDDDLRDLQK 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1925 KELQLLRVKEDVNMSHKKINEMEQLKKQFeAQNLSM---------------QSVRMDNFQLTKKLHESLEEIRIVAKER- 1988
Cdd:pfam04108 152 ELESLSSPSESISLIPTLLKELESLEEEM-ASLLESltnhydqcvtavkltEGGRAEMLEVLENDARELDDVVPELQDRl 230
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 767930917 1989 DELRRIKESLKMERDQFIATLREMIARDRQNHQVKpeKRLLSDG--QQHLTESLREKCSRIKELLKRYSEMDDHYECL 2064
Cdd:pfam04108 231 DEMENNYERLQKLLEQKNSLIDELLSALQLIAEIQ--SRLPEYLaaLKEFEERWEEEKETIEDYLSELEDLREFYEGF 306
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1880-2428 |
1.53e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 43.90 E-value: 1.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1880 SKEHKETVDKLREKISEKTIQISDIQKDLDKSKDELQKKIQELQKKELQLLRVKEDVNMSHKKINEMEQLKKQFEAQNLS 1959
Cdd:PRK03918 167 LGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEKE 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1960 MQSVRMDNFQLTKKLHESLEEIRIVAKERDELRRIK---ESLKMERDQFIATLREMIARDRQNHQVKPEKRLLSD---GQ 2033
Cdd:PRK03918 247 LESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVkelKELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEeinGI 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2034 QHLTESLREKCSRIKELLKRYSEMDDHYECLNRLSLDLEKEIEFQKELSmRVKANLSLpyLQTKHIEKLFTANQRCSMEF 2113
Cdd:PRK03918 327 EERIKELEEKEERLEELKKKLKELEKRLEELEERHELYEEAKAKKEELE-RLKKRLTG--LTPEKLEKELEELEKAKEEI 403
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2114 HRIMKKLKYVLSYVTKIKEEQHESINKFE----------------------MDFIDEVEKQKELLIKIQHLQQDCDVPSR 2171
Cdd:PRK03918 404 EEEISKITARIGELKKEIKELKKAIEELKkakgkcpvcgrelteehrkellEEYTAELKRIEKELKEIEEKERKLRKELR 483
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2172 ELRDLKLNQNMDLHIEEILKDFSESEFPSIKTEFQQVLSNRKEMTQFLEEWLNTRFDIEKLKNGIQKENDricqvnnfFN 2251
Cdd:PRK03918 484 ELEKVLKKESELIKLKELAEQLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEE--------LK 555
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2252 NRIIAIMNESTEFEERSATISKEWE-------QDLKSLKEKNEKLFKNYQTLKTSLASGAQVNPTTQDNKNPHVTSRAT- 2323
Cdd:PRK03918 556 KKLAELEKKLDELEEELAELLKELEelgfesvEELEERLKELEPFYNEYLELKDAEKELEREEKELKKLEEELDKAFEEl 635
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 2324 QLTTEKIRELENSLHEAKESAMHKESKiiKMQKELEVTNDIIAKLQAKVHESNKCLEKTKETIQVLQDKVAlGAKPYKEE 2403
Cdd:PRK03918 636 AETEKRLEELRKELEELEKKYSEEEYE--ELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELE-EREKAKKE 712
|
570 580
....*....|....*....|....*..
gi 767930917 2404 IEDLKMKLVKID--LEKMKNAKEFEKE 2428
Cdd:PRK03918 713 LEKLEKALERVEelREKVKKYKALLKE 739
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
759-1091 |
1.61e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 43.35 E-value: 1.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 759 LRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEFQNFKTLHMDFEQKYKMVLE 838
Cdd:COG4372 29 LSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQE 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 839 ENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKtLITEKLQ 918
Cdd:COG4372 109 EAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAE-AEQALDE 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 919 QTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIHDTVNMNIDTQEQLRNALESLKQHQETINTLKSKISEEVSRNLHME 998
Cdd:COG4372 188 LLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEELELAI 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 999 ENTGETKDEFQQKMVGIDKKQDLEAKNTQTLTADVKDNEIIEQQRKIFSLIQEKNELQQMLESVIAEKEQLKTDLKENIE 1078
Cdd:COG4372 268 LVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLELALAILLAELADLLQLLL 347
|
330
....*....|...
gi 767930917 1079 MTIENQEELRLLG 1091
Cdd:COG4372 348 VGLLDNDVLELLS 360
|
|
| PRK00409 |
PRK00409 |
recombination and DNA strand exchange inhibitor protein; Reviewed |
849-977 |
1.66e-03 |
|
recombination and DNA strand exchange inhibitor protein; Reviewed
Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 44.05 E-value: 1.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 849 NLSKEAQKFD---SSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLEnrdstlqtvEREKTLITEKLQQTLEEVK 925
Cdd:PRK00409 510 LIGEDKEKLNeliASLEELERELEQKAEEAEALLKEAEKLKEELEEKKEKLQ---------EEEDKLLEEAEKEAQQAIK 580
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 767930917 926 TLTQEKDD-LKQLQESLQIERDQLKSdiHDTvnmnIDTQEQLRNALESLKQHQ 977
Cdd:PRK00409 581 EAKKEADEiIKELRQLQKGGYASVKA--HEL----IEARKRLNKANEKKEKKK 627
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
499-951 |
1.93e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 43.60 E-value: 1.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 499 ELNSLRADYDNLVLDYEQLRTEKEEMELKLKE-KNDLDEFEALER-----KTKKDQEMQLIHEISNLKNLVKHAEVYnQD 572
Cdd:COG4717 82 EAEEKEEEYAELQEELEELEEELEELEAELEElREELEKLEKLLQllplyQELEALEAELAELPERLEELEERLEEL-RE 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 573 LENELSSKVELLREKEDQIKKLQEYIDSQKLENIKmdlsyslesiedpkqmkqtlfdaetvalDAKRESAFLRSENLELK 652
Cdd:COG4717 161 LEEELEELEAELAELQEELEELLEQLSLATEEELQ----------------------------DLAEELEELQQRLAELE 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 653 EKMKELATTYKQMENDIQLYQSQLEAKKkmqvdLEKELQSAFNEITKLTSLIDGKVPKDLLCNLELE---------GKIT 723
Cdd:COG4717 213 EELEEAQEELEELEEELEQLENELEAAA-----LEERLKEARLLLLIAAALLALLGLGGSLLSLILTiagvlflvlGLLA 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 724 DLQKELNKEVEENEALREEVILLSELKSLpseverLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKD 803
Cdd:COG4717 288 LLFLLLAREKASLGKEAEELQALPALEEL------EEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEE 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 804 DLAtTQSNYKSTDQEFQNFK-TLHMDFEQKYKMvLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKT--QELQEKTR 880
Cdd:COG4717 362 ELQ-LEELEQEIAALLAEAGvEDEEELRAALEQ-AEEYQELKEELEELEEQLEELLGELEELLEALDEEEleEELEELEE 439
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 767930917 881 EVQERLNEMEQLKEQLENRDSTLQTVEREKTL--ITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSD 951
Cdd:COG4717 440 ELEELEEELEELREELAELEAELEQLEEDGELaeLLQELEELKAELRELAEEWAALKLALELLEEAREEYREE 512
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
1050-1255 |
1.95e-03 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 43.35 E-value: 1.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1050 QEKNELQQMLESVIAEKEQLKTDLKENIEMTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKL 1129
Cdd:pfam07888 41 QERAELLQAQEAANRQREKEKERYKRDREQWERQRRELESRVAELKEELRQSREKHEELEEKYKELSASSEELSEEKDAL 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1130 -KEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKERKVLKEL 1208
Cdd:pfam07888 121 lAQRAAHEARIRELEEDIKTLTQRVLERETELERMKERAKKAGAQRKEEEAERKQLQAKLQQTEEELRSLSKEFQELRNS 200
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 767930917 1209 QKSFETERDHLRGYIReieatglQTKEELKIAHIHLKEHQETIDELR 1255
Cdd:pfam07888 201 LAQRDTQVLQLQDTIT-------TLTQKLTTAHRKEAENEALLEELR 240
|
|
| Crescentin |
pfam19220 |
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament ... |
1454-1778 |
1.99e-03 |
|
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament proteins, named crescentin, whose cytoskeletal function is required for the vibrioid and helical shapes of Caulobacter crescentus. Without crescentin, the cells adopt a straight-rod morphology. Crescentin has characteriztic features of IF proteins including the ability to assemble into filaments in vitro without energy or cofactor requirements. In vivo, crescentin forms a helical structure that colocalizes with the inner cell curvatures beneath the cytoplasmic membrane.
Pssm-ID: 437057 [Multi-domain] Cd Length: 401 Bit Score: 43.13 E-value: 1.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1454 LQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNLSEKETEISTIQKQLEAindklqnkiqeiyEKEE 1533
Cdd:pfam19220 67 LRRELAGLTRRLSAAEGELEELVARLAKLEAALREAEAAKEELRIELRDKTAQAEALERQLAA-------------ETEQ 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1534 QFNIKQisevqekvnELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQIMIKEKEEMkrVQEALQIERdQLKENT 1613
Cdd:pfam19220 134 NRALEE---------ENKALREEAQAAEKALQRAEGELATARERLALLEQENRRLQALSEEQ--AAELAELTR-RLAELE 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1614 KEIVAKMKESQEKEYQFLKMTAVNETQEKMCEIEHLKEQFETQKLNLEnIETENIRltqilHENLEEMrsVTKERDDLRS 1693
Cdd:pfam19220 202 TQLDATRARLRALEGQLAAEQAERERAEAQLEEAVEAHRAERASLRMK-LEALTAR-----AAATEQL--LAEARNQLRD 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1694 VEETLKVERDQLKENLRETITRDLKIqEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKD-------LENSNAKLQ 1766
Cdd:pfam19220 274 RDEAIRAAERRLKEASIERDTLERRL-AGLEADLERRTQQFQEMQRARAELEERAEMLTKALAAkdaalerAEERIASLS 352
|
330
....*....|..
gi 767930917 1767 EKIQELKANEHQ 1778
Cdd:pfam19220 353 DRIAELTKRFEV 364
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
1329-1530 |
2.04e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 43.46 E-value: 2.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1329 ERLRLNEKFQESQEEIKS---------LTKERDNLKTIKEALEVKHDQLKEHIREtlakiQESQSKQEQSLNMKekdneT 1399
Cdd:PHA02562 195 QQIKTYNKNIEEQRKKNGeniarkqnkYDELVEEAKTIKAEIEELTDELLNLVMD-----IEDPSAALNKLNTA-----A 264
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1400 TKIVSEMEQFKpKDSALLRIEIE----MLGLS---KRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEI--VA 1470
Cdd:PHA02562 265 AKIKSKIEQFQ-KVIKMYEKGGVcptcTQQISegpDRITKIKDKLKELQHSLEKLDTAIDELEEIMDEFNEQSKKLleLK 343
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 767930917 1471 KHLETEE-ELKVAHCCLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYE 1530
Cdd:PHA02562 344 NKISTNKqSLITLVDKAKKVKAAIEELQAEFVDNAEELAKLQDELDKIVKTKSELVKEKYH 404
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
842-998 |
2.16e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 43.47 E-value: 2.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 842 RMNQEIVNLSKEAQKFDSSLGALKTELSyktqELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITE--KLQQ 919
Cdd:COG3206 202 RQKNGLVDLSEEAKLLLQQLSELESQLA----EARAELAEAEARLAALRAQLGSGPDALPELLQSPVIQQLRAQlaELEA 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 920 TLEEVKTLTQE--------KDDLKQLQESLQIERDQLKSDIHDTVNMNIDTQEQLRNALESLKQHQETINTLKSKISE-- 989
Cdd:COG3206 278 ELAELSARYTPnhpdvialRAQIAALRAQLQQEAQRILASLEAELEALQAREASLQAQLAQLEARLAELPELEAELRRle 357
|
170
....*....|..
gi 767930917 990 ---EVSRNLHME 998
Cdd:COG3206 358 revEVARELYES 369
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
1682-1997 |
2.30e-03 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 43.19 E-value: 2.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1682 RSVTKERDDLRSVEETLKVERDQL---KENLRETITRDLKIQEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDL 1758
Cdd:pfam05557 41 RQLDRESDRNQELQKRIRLLEKREaeaEEALREQAELNRLKKKYLEALNKKLNEKESQLADAREVISCLKNELSELRRQI 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1759 ENSNAKLQEKIQELKANEHQLitlkkdvNETQKKVSEMEQLKKQIKDQSLTLSKLEIENLNLAQKLHENLEEMKSVMKER 1838
Cdd:pfam05557 121 QRAELELQSTNSELEELQERL-------DLLKAKASEAEQLRQNLEKQQSSLAEAEQRIKELEFEIQSQEQDSEIVKNSK 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1839 DNLRRVEETLKLERDQLKE-----SLQETKARDLEIQQELKTARMLSKEHKETVDKL---REKISEKTIQISDIQKDLD- 1909
Cdd:pfam05557 194 SELARIPELEKELERLREHnkhlnENIENKLLLKEEVEDLKRKLEREEKYREEAATLeleKEKLEQELQSWVKLAQDTGl 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1910 --KSKDELQKKIQELQKKELQLLRVKEDVNMS----HKKINEMEQLKKQFEAQNLSMQSVRMDNFQLTKKLHESLeeiRI 1983
Cdd:pfam05557 274 nlRSPEDLSRRIEQLQQREIVLKEENSSLTSSarqlEKARRELEQELAQYLKKIEDLNKKLKRHKALVRRLQRRV---LL 350
|
330
....*....|....
gi 767930917 1984 VAKERDELRRIKES 1997
Cdd:pfam05557 351 LTKERDGYRAILES 364
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1082-1292 |
2.45e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.83 E-value: 2.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1082 ENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLKEksqqlqekqqqllnVQEEMSEMQKKINEIE 1161
Cdd:COG4942 24 EAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRA--------------LEQELAALEAELAELE 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1162 NLKNELKNKELTLEHMETERLELAQKLNE--------NYEEVKSITKERKVLKELQKSFETERDHLRGYIREIEATGLQT 1233
Cdd:COG4942 90 KEIAELRAELEAQKEELAELLRALYRLGRqpplalllSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAEL 169
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 767930917 1234 KEELKIAHIHLKEHQETIDELRRSVSEKTAQIintQDLEKSHTKLQEEIPVLHEEQELL 1292
Cdd:COG4942 170 EAERAELEALLAELEEERAALEALKAERQKLL---ARLEKELAELAAELAELQQEAEEL 225
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1826-1992 |
2.62e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 41.83 E-value: 2.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1826 ENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQ 1905
Cdd:COG1579 7 RALLDLQELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVR 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1906 -----KDLDKSKDELQKKIQELQKKELQLLRVKEDVNmshKKINEMEQLKKQFEAQNLSMQSvrmdnfQLTKKLHESLEE 1980
Cdd:COG1579 87 nnkeyEALQKEIESLKRRISDLEDEILELMERIEELE---EELAELEAELAELEAELEEKKA------ELDEELAELEAE 157
|
170
....*....|..
gi 767930917 1981 IRIVAKERDELR 1992
Cdd:COG1579 158 LEELEAEREELA 169
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
518-1350 |
2.66e-03 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 43.50 E-value: 2.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 518 RTEKEEMELKLKEKNDLDEFEALERKTKKDQEMQLIHEISNLKNLVKHAEVYNQDLENELSSK-VELLREKEDQIKKLQE 596
Cdd:TIGR00606 229 KEAQLESSREIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALKSRKKQMEKDNSELELKmEKVFQGTDEQLNDLYH 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 597 YIDS--QKLENIKMDLSYSLESIEDPKQM---KQTLFDAE--TVALDAKRESAFLRSENLELKEKMKEL--------ATT 661
Cdd:TIGR00606 309 NHQRtvREKERELVDCQRELEKLNKERRLlnqEKTELLVEqgRLQLQADRHQEHIRARDSLIQSLATRLeldgfergPFS 388
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 662 YKQMENDIQLYQSQLEAKKKMQVDLEKELQSafNEITKLTSLIDGKVPKDLLcnleleGKITDLQKE-LNKEVEENEALR 740
Cdd:TIGR00606 389 ERQIKNFHTLVIERQEDEAKTAAQLCADLQS--KERLKQEQADEIRDEKKGL------GRTIELKKEiLEKKQEELKFVI 460
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 741 eevillSELKSLPSEVER-LRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEF 819
Cdd:TIGR00606 461 ------KELQQLEGSSDRiLELDQELRKAERELSKAEKNSLTETLKKEVKSLQNEKADLDRKLRKLDQEMEQLNHHTTTR 534
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 820 QNFKTLHMDFEQKYKMVLEENERMNQEIVNLSKEAqKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENR 899
Cdd:TIGR00606 535 TQMEMLTKDKMDKDEQIRKIKSRHSDELTSLLGYF-PNKKQLEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHINNE 613
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 900 dstlqtvEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQL-----KSDIHDTVNMNIDTQEQ-----LRNA 969
Cdd:TIGR00606 614 -------LESKEEQLSSYEDKLFDVCGSQDEESDLERLKEEIEKSSKQRamlagATAVYSQFITQLTDENQsccpvCQRV 686
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 970 LESLKQHQETINTLKSKI---------SEEVSRNLHMEENTGETKDEFQQKMVGIDKKQ--DLEAKNTQTLTADVKDNEI 1038
Cdd:TIGR00606 687 FQTEAELQEFISDLQSKLrlapdklksTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEipELRNKLQKVNRDIQRLKND 766
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1039 IEQQRKIFSLIQEKNELQQMLESVIAEKEQLKTDLKENIEMTIENQEELRLL-GDELKKQQEIVAQEKNHAIKK---EGE 1114
Cdd:TIGR00606 767 IEEQETLLGTIMPEEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGSdLDRTVQQVNQEKQEKQHELDTvvsKIE 846
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1115 LSRTC------------DRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNKELTLEHMETERL 1182
Cdd:TIGR00606 847 LNRKLiqdqqeqiqhlkSKTNELKSEKLQIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQDSPLETFLEKDQQEKE 926
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1183 ELaqkLNENYEEVKSITKERKVLKELQKSFETERDHLRGYIREIEATGLQTKE-ELKIAHIHLKE---HQETIDELRRSV 1258
Cdd:TIGR00606 927 EL---ISSKETSNKKAQDKVNDIKEKVKNIHGYMKDIENKIQDGKDDYLKQKEtELNTVNAQLEEcekHQEKINEDMRLM 1003
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1259 SektaQIINTQDLEKSHtkLQEEIPVLHEEQELLPNVKEVSETQETMNELELL-TEQSTTKDSTTLARIEMERLRLNEKF 1337
Cdd:TIGR00606 1004 R----QDIDTQKIQERW--LQDNLTLRKRENELKEVEEELKQHLKEMGQMQVLqMKQEHQKLEENIDLIKRNHVLALGRQ 1077
|
890
....*....|...
gi 767930917 1338 QESQEEIKSLTKE 1350
Cdd:TIGR00606 1078 KGYEKEIKHFKKE 1090
|
|
| secA |
PRK12903 |
preprotein translocase subunit SecA; Reviewed |
1161-1452 |
2.96e-03 |
|
preprotein translocase subunit SecA; Reviewed
Pssm-ID: 237258 [Multi-domain] Cd Length: 925 Bit Score: 43.12 E-value: 2.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1161 ENLKNELKNKELTLEHMETERLELAQKLNENYEEvkSITKERKVLKElqksfETERDHLRGYIREIEatglqtkeeLKIA 1240
Cdd:PRK12903 657 DNLLRITHFKFSEKDFENYHKEELAQYLIEALNE--IYFKKRQVILD-----KIALNTFFESERYII---------LSAL 720
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1241 HIHLKEHQETIDELRRSV-----SEKTAQIINTQDLEKSHTKLQEEIPvlheeQELLPNVKEVSETQETMNELELLTEQS 1315
Cdd:PRK12903 721 DKYWQNHIDTMDKLRSGVnlvqySQKNPYQVYTEEGTKKFNILLQEIA-----YDVIVSLFNNPNAEKILIITEILSDGI 795
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1316 TTKDSTTLARIEMERLRLNEkfqesQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQSLNMKEK 1395
Cdd:PRK12903 796 NNSDINDRPQELIDQIIESE-----EERLKALRIQREEMLMRPEELELINEEQKNLKQEIKLELSEIQEAEEEIQNINEN 870
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 767930917 1396 DNettkivsEMEQFKPKDSALLRIEIEMLGLSKRLQESHDEMKSVAKEKDDLQRLQE 1452
Cdd:PRK12903 871 KN-------EFVEFKNDPKKLNKLIIAKDVLIKLVISSDEIKQDEKTTKKKKKDLEK 920
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
745-899 |
2.97e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 41.83 E-value: 2.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 745 LLSELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSN--YKSTDQEFQNF 822
Cdd:COG1579 22 LEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNNkeYEALQKEIESL 101
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 767930917 823 KTLHMDFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSyktQELQEKTREVQERLNEMEQLKEQLENR 899
Cdd:COG1579 102 KRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELD---EELAELEAELEELEAEREELAAKIPPE 175
|
|
| HCR |
pfam07111 |
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha ... |
1416-2017 |
3.04e-03 |
|
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha helical coiled-coil rod HCR proteins. The function of HCR is unknown but it has been implicated in psoriasis in humans and is thought to affect keratinocyte proliferation.
Pssm-ID: 284517 [Multi-domain] Cd Length: 749 Bit Score: 43.20 E-value: 3.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1416 LLRIEIEMLGLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIK--EIVAKHLE--TEEELKVAHCCLKEQEE 1491
Cdd:pfam07111 75 LRRLEEEVRLLRETSLQQKMRLEAQAMELDALAVAEKAGQAEAEGLRAALAgaEMVRKNLEegSQRELEEIQRLHQEQLS 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1492 TINEL-RVNLSEKETEISTIQKQLEAINDKLQNKIQEIYE--KEEQFNIKQISEVQEK-------VNELKQFKEHRKAKD 1561
Cdd:pfam07111 155 SLTQAhEEALSSLTSKAEGLEKSLNSLETKRAGEAKQLAEaqKEAELLRKQLSKTQEEleaqvtlVESLRKYVGEQVPPE 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1562 SALQSIESKMLELTNRLQESQEEIQIMIKEKEEMK-RVQEALQIERDQLKENTKEIvaKMKESQEKEYQFLKMTAVNETQ 1640
Cdd:pfam07111 235 VHSQTWELERQELLDTMQHLQEDRADLQATVELLQvRVQSLTHMLALQEEELTRKI--QPSDSLEPEFPKKCRSLLNRWR 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1641 EKMC---------EIEHLK--EQFETQKLNLENIETENIRLTQILHENLEEMrsvTKERDDLRSVEETLKVERDQLKENL 1709
Cdd:pfam07111 313 EKVFalmvqlkaqDLEHRDsvKQLRGQVAELQEQVTSQSQEQAILQRALQDK---AAEVEVERMSAKGLQMELSRAQEAR 389
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1710 RETITRDLKIQEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQeKIQELKANEHQLITLKKDVNET 1789
Cdd:pfam07111 390 RRQQQQTASAEEQLKFVVNAMSSTQIWLETTMTRVEQAVARIPSLSNRLSYAVRKVH-TIKGLMARKVALAQLRQESCPP 468
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1790 QKKVSEMEqlkkqiKDQSLTLSKLEIENLNLAQKLHENLEEMKS-VMKERDNLRRVEETLKLERDQLKESLQETKARDLE 1868
Cdd:pfam07111 469 PPPAPPVD------ADLSLELEQLREERNRLDAELQLSAHLIQQeVGRAREQGEAERQQLSEVAQQLEQELQRAQESLAS 542
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1869 IQQELKTARMLSKEHKETVDKLREKISEKTiqisdiqkdlDKSKDELQKKIQELQKkelqllRVKEDVNMSHKKINEMEQ 1948
Cdd:pfam07111 543 VGQQLEVARQGQQESTEEAASLRQELTQQQ----------EIYGQALQEKVAEVET------RLREQLSDTKRRLNEARR 606
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1949 lkkqfeAQNLSMQSVRMDNFQLTKKlhesleeirivaKERD-ELRRIKESLKMERDQFIATLREMIARDR 2017
Cdd:pfam07111 607 ------EQAKAVVSLRQIQHRATQE------------KERNqELRRLQDEARKEEGQRLARRVQELERDK 658
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
496-984 |
3.08e-03 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 42.97 E-value: 3.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 496 IESELNSLRADYDNLVLDYEQLRTEKEEMELKLKEKNDLDEfEALERKTKKDQEMQLIHEISNLKnlvkhaEVYNQDLEN 575
Cdd:PRK01156 216 TLKEIERLSIEYNNAMDDYNNLKSALNELSSLEDMKNRYES-EIKTAESDLSMELEKNNYYKELE------ERHMKIIND 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 576 ELSSKVELLREKEDQIKKLQEYidSQKLENIKMDLSYSLESIEDPKQMKQTlfdaetvaldakresaflRSENLELKEKM 655
Cdd:PRK01156 289 PVYKNRNYINDYFKYKNDIENK--KQILSNIDAEINKYHAIIKKLSVLQKD------------------YNDYIKKKSRY 348
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 656 KELATTYKQMENDIQLYQSQL---EAKKKMQVDLEKELQSAFNEITKLTSL--IDGKVPKDLLCNL-----ELEGKITDL 725
Cdd:PRK01156 349 DDLNNQILELEGYEMDYNSYLksiESLKKKIEEYSKNIERMSAFISEILKIqeIDPDAIKKELNEInvklqDISSKVSSL 428
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 726 QKELNKEVEENEALREEVILLS--------------------------ELKSLPSEVERLRKEIQDKSEELHIITSEKDK 779
Cdd:PRK01156 429 NQRIRALRENLDELSRNMEMLNgqsvcpvcgttlgeeksnhiinhyneKKSRLEEKIREIEIEVKDIDEKIVDLKKRKEY 508
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 780 LFSEVVHK----ESRVQGLLEEIGKTKDDLATTQSNYKSTDQEFQNFKTLHM-DFEQKYKMVLEEN-------------- 840
Cdd:PRK01156 509 LESEEINKsineYNKIESARADLEDIKIKINELKDKHDKYEEIKNRYKSLKLeDLDSKRTSWLNALavislidietnrsr 588
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 841 -ERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQ 919
Cdd:PRK01156 589 sNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSIREIENEANNLNNKYNEIQENKILIEKLRGKIDNYKKQIAEIDSIIPD 668
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 767930917 920 TLEEVKTLTQEKDDLKQLQESLQ---IERDQLKSdIHDTVNMNIDTQEQ----LRNALESLKQHQETINTLK 984
Cdd:PRK01156 669 LKEITSRINDIEDNLKKSRKALDdakANRARLES-TIEILRTRINELSDrindINETLESMKKIKKAIGDLK 739
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
1790-1943 |
3.43e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 42.84 E-value: 3.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1790 QKKVSEMEQLKKQIKDQSltlsKLEIEN------LNLAQKLHENLEEMKSVMKERDN-LRRVEETLKLERDQLKESLQET 1862
Cdd:PRK12704 30 EAKIKEAEEEAKRILEEA----KKEAEAikkealLEAKEEIHKLRNEFEKELRERRNeLQKLEKRLLQKEENLDRKLELL 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1863 KARDLEIQQELKTARMLSKE---HKETVDKLREKISEKTIQISDIQKD------LDKSKDELQKKIQELQKKELQllRVK 1933
Cdd:PRK12704 106 EKREEELEKKEKELEQKQQElekKEEELEELIEEQLQELERISGLTAEeakeilLEKVEEEARHEAAVLIKEIEE--EAK 183
|
170
....*....|
gi 767930917 1934 EDVNMSHKKI 1943
Cdd:PRK12704 184 EEADKKAKEI 193
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
1788-1922 |
3.45e-03 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 42.26 E-value: 3.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1788 ETQKKVSEMEQLKKQIKDqsltLSKLeienLNLAQKLHENLEEmkSVMKERDNLRRVE---ETLKLERDQLKESLQETKA 1864
Cdd:PRK09039 47 EISGKDSALDRLNSQIAE----LADL----LSLERQGNQDLQD--SVANLRASLSAAEaerSRLQALLAELAGAGAAAEG 116
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 767930917 1865 RDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKDLDKSKD---ELQKKIQEL 1922
Cdd:PRK09039 117 RAGELAQELDSEKQVSARALAQVELLNQQIAALRRQLAALEAALDASEKrdrESQAKIADL 177
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
830-1104 |
3.47e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 42.58 E-value: 3.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 830 EQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVERE 909
Cdd:COG4372 30 SEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQEE 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 910 KTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQ---IERDQLKSDIHDTVNMNIDTQEQLRNALESLKQhQETINTLKSK 986
Cdd:COG4372 110 AEELQEELEELQKERQDLEQQRKQLEAQIAELQseiAEREEELKELEEQLESLQEELAALEQELQALSE-AEAEQALDEL 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 987 ISEEVSRNLHMEENTGETKDEFQQKMVGIDKKQDLEAKNTQTLTADVKDNEIIEQQRKIFSLIQEKNELQQMLESVIAEK 1066
Cdd:COG4372 189 LKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEELELAIL 268
|
250 260 270
....*....|....*....|....*....|....*...
gi 767930917 1067 EQLKTDLKENIEMTIENQEELRLLGDELKKQQEIVAQE 1104
Cdd:COG4372 269 VEKDTEEEELEIAALELEALEEAALELKLLALLLNLAA 306
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1802-1956 |
3.50e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 42.51 E-value: 3.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1802 QIKDQSLTLSKLEIENLNLAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKT-ARMLS 1880
Cdd:COG3883 17 QIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGErARALY 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1881 KEHK---------------------ETVDKLREKISEKTIQISDIQKDLDKSKDELQKKIQELQKKELQLLRVKEDVNms 1939
Cdd:COG3883 97 RSGGsvsyldvllgsesfsdfldrlSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAELE-- 174
|
170
....*....|....*..
gi 767930917 1940 hKKINEMEQLKKQFEAQ 1956
Cdd:COG3883 175 -AQQAEQEALLAQLSAE 190
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
871-1110 |
3.50e-03 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 42.98 E-value: 3.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 871 KTQELQEKTREVQERLnemEQLKEQLENRDSTLQTVEREktliTEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKS 950
Cdd:PRK11281 67 QTLALLDKIDRQKEET---EQLKQQLAQAPAKLRQAQAE----LEALKDDNDEETRETLSTLSLRQLESRLAQTLDQLQN 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 951 DIHDTVNMNID-----TQ-EQLRNAL-ESLKQHQETINTLKS-KISEEVSRN-----LHMEENTGETKDEFQQK-MVGID 1016
Cdd:PRK11281 140 AQNDLAEYNSQlvslqTQpERAQAALyANSQRLQQIRNLLKGgKVGGKALRPsqrvlLQAEQALLNAQNDLQRKsLEGNT 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1017 KKQDLEAK-------NTQTLTADVKD-NEIIEQQRkifsLIQEKNELQQMLESVIAEKEQ----LKTDLKENIEMT---I 1081
Cdd:PRK11281 220 QLQDLLQKqrdyltaRIQRLEHQLQLlQEAINSKR----LTLSEKTVQEAQSQDEAARIQanplVAQELEINLQLSqrlL 295
|
250 260 270
....*....|....*....|....*....|.
gi 767930917 1082 ENQEEL-RLLGDELK-KQQEIVAQEKNHAIK 1110
Cdd:PRK11281 296 KATEKLnTLTQQNLRvKNWLDRLTQSERNIK 326
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
1025-1238 |
3.51e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 42.69 E-value: 3.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1025 NTQTLTADVKDNEIIEQ---QRKIFSLIQEKN-----ELQQMLESVIAEKEQLKTDLKE------NIEMTIENQEE-LRL 1089
Cdd:PHA02562 180 NQQIQTLDMKIDHIQQQiktYNKNIEEQRKKNgeniaRKQNKYDELVEEAKTIKAEIEEltdellNLVMDIEDPSAaLNK 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1090 LGDELKKQQEIVAQ-EKNHAIKKEGELSRTCDRLAEVEEKLKEKsqqlqekqqqllnVQEEMSEMQKKINEIENLKNELK 1168
Cdd:PHA02562 260 LNTAAAKIKSKIEQfQKVIKMYEKGGVCPTCTQQISEGPDRITK-------------IKDKLKELQHSLEKLDTAIDELE 326
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 767930917 1169 NKELTLEHMETERLELAQKLNENYE----EVKSITKERKVLKELQKSFETERDHLRGYIREIEATGlQTKEELK 1238
Cdd:PHA02562 327 EIMDEFNEQSKKLLELKNKISTNKQslitLVDKAKKVKAAIEELQAEFVDNAEELAKLQDELDKIV-KTKSELV 399
|
|
| RND_1 |
NF037998 |
protein translocase SecDF, variant type; Members of this family are identified by TCDB as ... |
1500-1608 |
3.76e-03 |
|
protein translocase SecDF, variant type; Members of this family are identified by TCDB as belonging to 2.A.6.4.4, a variant 12-TM type SecDF, as found in Spiroplasma, Mesoplasma, and Acholeplasma.
Pssm-ID: 468306 Cd Length: 1237 Bit Score: 42.84 E-value: 3.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1500 LSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQFNIKQISEVQEKVNELKQFK---EHRKAKDSALQSIESKMLELTN 1576
Cdd:NF037998 639 LTNKEKLSSKLLLKIKKINDKIDLLKKKEENKEAKKNAKLIEKVKAKIKKLEQKItklKLNKKKSNKIIKIRWKKKDWIF 718
|
90 100 110
....*....|....*....|....*....|..
gi 767930917 1577 RLQESQEEiqIMIKEKEEMKRVQEALQIERDQ 1608
Cdd:NF037998 719 FLKDNTDV--ILAIESEIEIQVIEKIKVKRNE 748
|
|
| Mitofilin |
pfam09731 |
Mitochondrial inner membrane protein; Mitofilin controls mitochondrial cristae morphology. ... |
1155-1522 |
3.96e-03 |
|
Mitochondrial inner membrane protein; Mitofilin controls mitochondrial cristae morphology. Mitofilin is enriched in the narrow space between the inner boundary and the outer membranes, where it forms a homotypic interaction and assembles into a large multimeric protein complex. The first 78 amino acids contain a typical amino-terminal-cleavable mitochondrial presequence rich in positive-charged and hydroxylated residues and a membrane anchor domain. In addition, it has three centrally located coiled coil domains.
Pssm-ID: 430783 [Multi-domain] Cd Length: 618 Bit Score: 42.44 E-value: 3.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1155 KKINEIENLKNELKNKELTLEHMETERLELAQKlnenyEEVKSITKERKVLKElqkSFETERDHLRGYIREIEATGLQTK 1234
Cdd:pfam09731 121 KSEQEKEKALEEVLKEAISKAESATAVAKEAKD-----DAIQAVKAHTDSLKE---ASDTAEISREKATDSALQKAEALA 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1235 EELKIAHIHLKEHQET-----IDELRRSVSEKTAQIINTQDLEKSHTKLQEEIPVLHEEQELLPNVkEVSETQETMNELE 1309
Cdd:pfam09731 193 EKLKEVINLAKQSEEEaapplLDAAPETPPKLPEHLDNVEEKVEKAQSLAKLVDQYKELVASERIV-FQQELVSIFPDII 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1310 L----LTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIKsltkerdnlKTIKEALEVKHDQLKEHIRETLAKIQESQSK 1385
Cdd:pfam09731 272 PvlkeDNLLSNDDLNSLIAHAHREIDQLSKKLAELKKREE---------KHIERALEKQKEELDKLAEELSARLEEVRAA 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1386 QEQSLNmKEKDNETTKIVSEMEQfkpkdsaLLRIEIEmlglskRLQESHDEmksvakekddlqRLQEVLQSESDQLKENI 1465
Cdd:pfam09731 343 DEAQLR-LEFEREREEIRESYEE-------KLRTELE------RQAEAHEE------------HLKDVLVEQEIELQREF 396
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 767930917 1466 KEIVAKHLETEEELkvahcclkeQEETINELRVNLSEKETEISTIqKQLEAINDKLQ 1522
Cdd:pfam09731 397 LQDIKEKVEEERAG---------RLLKLNELLANLKGLEKATSSH-SEVEDENRKAQ 443
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
637-1282 |
3.96e-03 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 42.90 E-value: 3.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 637 AKRESAFLRSENLELKekmkeLATTYKQMENDIQLYQSQLEAKKKMQVDL-------EKELQSAFNEITKLTSLIDGKVP 709
Cdd:pfam12128 244 TKLQQEFNTLESAELR-----LSHLHFGYKSDETLIASRQEERQETSAELnqllrtlDDQWKEKRDELNGELSAADAAVA 318
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 710 KD------------LLCNLELEGKITDLQKELNKEVEENEALREEVILLSELKSLPSEVERLR--------KEIQDKSEE 769
Cdd:pfam12128 319 KDrselealedqhgAFLDADIETAAADQEQLPSWQSELENLEERLKALTGKHQDVTAKYNRRRskikeqnnRDIAGIKDK 398
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 770 LHIITSEKDKLFSEV-VHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEFqNFKTLHMDFEQKYKMVLEEN----ERMN 844
Cdd:pfam12128 399 LAKIREARDRQLAVAeDDLQALESELREQLEAGKLEFNEEEYRLKSRLGEL-KLRLNQATATPELLLQLENFderiERAR 477
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 845 QEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVERE----------KTLIT 914
Cdd:pfam12128 478 EEQEAANAEVERLQSELRQARKRRDQASEALRQASRRLEERQSALDELELQLFPQAGTLLHFLRKeapdweqsigKVISP 557
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 915 EKLQQT-LEEVKTLTQEKD---------DLKQLQ--------ESLQIERDQLKSDIHDtvnmnidtqeqlrnALESLKQH 976
Cdd:pfam12128 558 ELLHRTdLDPEVWDGSVGGelnlygvklDLKRIDvpewaaseEELRERLDKAEEALQS--------------AREKQAAA 623
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 977 QETINTLKSKIsEEVSRNLHMEENTGETKDEFQQKMVgiDKKQDLEAKNTQTLTAdvkdneiiEQQRKIFSLIQEKNELQ 1056
Cdd:pfam12128 624 EEQLVQANGEL-EKASREETFARTALKNARLDLRRLF--DEKQSEKDKKNKALAE--------RKDSANERLNSLEAQLK 692
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1057 QMLESVIAEKEQLKTDLKENiemTIENQEELRLLGDELKKQ-----QEIVAQEKNHAIKKEG---ELSRTCDRLAEVEEK 1128
Cdd:pfam12128 693 QLDKKHQAWLEEQKEQKREA---RTEKQAYWQVVEGALDAQlallkAAIAARRSGAKAELKAletWYKRDLASLGVDPDV 769
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1129 LKEKSQQLQEKQQQLLNV---QEEMSEMQKKINEIENLKNElkNKELTLEHMETERLELAQKLNENYEEVKSITKErkvl 1205
Cdd:pfam12128 770 IAKLKREIRTLERKIERIavrRQEVLRYFDWYQETWLQRRP--RLATQLSNIERAISELQQQLARLIADTKLRRAK---- 843
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 767930917 1206 kelqksFETERDHLRGyiREIEATGLQTKEELKIAHI-HLKEHQeTIDELRRSVSEKTAQIintQDLEKSHTKLQEEI 1282
Cdd:pfam12128 844 ------LEMERKASEK--QQVRLSENLRGLRCEMSKLaTLKEDA-NSEQAQGSIGERLAQL---EDLKLKRDYLSESV 909
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
926-1223 |
4.07e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 42.61 E-value: 4.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 926 TLTQEKDD-LKQLQES--LQIErdQLKSDIHDtvnmnidtqEQLRNALESLKQHQETINTLKSKISEEvsrnlhmeentg 1002
Cdd:PRK05771 13 TLKSYKDEvLEALHELgvVHIE--DLKEELSN---------ERLRKLRSLLTKLSEALDKLRSYLPKL------------ 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1003 ETKDEFQQKMvgidKKQDLEAkntqtlTADVKDNEIIEQQRKIFSLIQEKNELQQMLESVIAEKEQLKtdLKENIEMTIE 1082
Cdd:PRK05771 70 NPLREEKKKV----SVKSLEE------LIKDVEEELEKIEKEIKELEEEISELENEIKELEQEIERLE--PWGNFDLDLS 137
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1083 NQEELRL-------LGDELKKQQEIVAQEKNHAIKKEGELSRTC------DRLAEVEEKLKeKSQQLQEKQQQLLNVQEE 1149
Cdd:PRK05771 138 LLLGFKYvsvfvgtVPEDKLEELKLESDVENVEYISTDKGYVYVvvvvlkELSDEVEEELK-KLGFERLELEEEGTPSEL 216
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 767930917 1150 MSEMQKKINEIENLKNELKNKeltLEhmeterlELAQKLNE---NYEEVKSITKERKVLKELQKsfETER-DHLRGYI 1223
Cdd:PRK05771 217 IREIKEELEEIEKERESLLEE---LK-------ELAKKYLEellALYEYLEIELERAEALSKFL--KTDKtFAIEGWV 282
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
653-902 |
4.29e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.06 E-value: 4.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 653 EKMKELATTYKQMENDIQLYQSQLEAKKKMQVDLEKELQSAFNEITKLTSLIDgkvpkdllcnlELEGKITDLQKELNKE 732
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIR-----------ALEQELAALEAELAEL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 733 VEENEALREEvilLSELKSLPSEVERLRKEIQDKSEELHIITSEKdklFSEVVHKESRVQGLLEEIGKTKDDLATTQSNY 812
Cdd:COG4942 89 EKEIAELRAE---LEAQKEELAELLRALYRLGRQPPLALLLSPED---FLDAVRRLQYLKYLAPARREQAEELRADLAEL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 813 KSTDQEFQNFKtlhmdfeQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQL 892
Cdd:COG4942 163 AALRAELEAER-------AELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAE 235
|
250
....*....|
gi 767930917 893 KEQLENRDST 902
Cdd:COG4942 236 AAAAAERTPA 245
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
828-948 |
4.67e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 42.64 E-value: 4.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 828 DFEQKYKMVLEEN-------ERMNQEIVNLSKEAqkfdSSLGALKTELSYKTQELQEKTREVQERLNE-------MEQLK 893
Cdd:PRK04863 541 EFCKRLGKNLDDEdeleqlqEELEARLESLSESV----SEARERRMALRQQLEQLQARIQRLAARAPAwlaaqdaLARLR 616
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 767930917 894 EQLENRDSTLQTVerektliTEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQL 948
Cdd:PRK04863 617 EQSGEEFEDSQDV-------TEYMQQLLERERELTVERDELAARKQALDEEIERL 664
|
|
| PTZ00440 |
PTZ00440 |
reticulocyte binding protein 2-like protein; Provisional |
501-1956 |
5.48e-03 |
|
reticulocyte binding protein 2-like protein; Provisional
Pssm-ID: 240419 [Multi-domain] Cd Length: 2722 Bit Score: 42.51 E-value: 5.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 501 NSLRADYDNLVLDYEQLRTEKEEMELKLKEKNDLDEFEALERKTKKDQEMQLIHEISNLKNLVKHAEVYNQDL------- 573
Cdd:PTZ00440 183 NVRKTLYDEKFNEYKNKKEAFYNCLKNKKEDYDKKIKKINNEIRKLLKNIKCTGNMCKTDTYVDMVELYLLRVnevpsnn 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 574 -ENELSSKVELLREKEDQIKKLQEYIDSQK----------------------LENIKMDLSY--SLESIEDPKQMKQT-- 626
Cdd:PTZ00440 263 yDNYLNRAKELLESGSDLINKIKKELGDNKtiysinfiqeeigdiikrynfhLKKIEKGKEYikRIQNNNIPPQVKKDel 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 627 ---LFDAETVALDAKRESAFLRSENLELKEKMKELATTYKQMENDIQ------LYQSQLEAKKKMQVDLEKELQSAFNEI 697
Cdd:PTZ00440 343 kkkYFESAKHYASFKFSLEMLSMLDSLLIKKEKILNNLFNKLFGDLKekietlLDSEYFISKYTNIISLSEHTLKAAEDV 422
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 698 TKLTSlidgKVPKDLLCNLELEgkITDLQKELNKEVEE-NEALREEVILLSELKSLPSEVERLRKEIQDKSEELHIITSE 776
Cdd:PTZ00440 423 LKENS----QKIADYALYSNLE--IIEIKKKYDEKINElKKSINQLKTLISIMKSFYDLIISEKDSMDSKEKKESSDSNY 496
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 777 KDKlfsevvhkesrVQGLLEEIGKTKDDLATTQSNYKSTDQEFQNFKTLHMDFEQKYKMVleenERMNQEIVNLSKEAQK 856
Cdd:PTZ00440 497 QEK-----------VDELLQIINSIKEKNNIVNNNFKNIEDYYITIEGLKNEIEGLIELI----KYYLQSIETLIKDEKL 561
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 857 FDSslgaLKTELSYKTQELQEKTrevqERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDlKQ 936
Cdd:PTZ00440 562 KRS----MKNDIKNKIKYIEENV----DHIKDIISLNDEIDNIIQQIEELINEALFNKEKFINEKNDLQEKVKYILN-KF 632
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 937 LQESLQIERDQLKSDIHDTVNM--NIDTQEQLRNALESLKQHQETINTLKSKISEEVSRNLHME-ENTGETKDEFQQKMV 1013
Cdd:PTZ00440 633 YKGDLQELLDELSHFLDDHKYLyhEAKSKEDLQTLLNTSKNEYEKLEFMKSDNIDNIIKNLKKElQNLLSLKENIIKKQL 712
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1014 GIDKKQDLEAKNTQTLTADVKDNEIIEQQRKIFSLIQEKNELQQMLESVIAEKEQLKTDLKE----------------NI 1077
Cdd:PTZ00440 713 NNIEQDISNSLNQYTIKYNDLKSSIEEYKEEEEKLEVYKHQIINRKNEFILHLYENDKDLPDgkntyeeflqykdtilNK 792
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1078 EMTIENQ-----EELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEE--KLKEKSQQLQEKQQQLLNVQEEM 1150
Cdd:PTZ00440 793 ENKISNDinilkENKKNNQDLLNSYNILIQKLEAHTEKNDEELKQLLQKFPTEDEnlNLKELEKEFNENNQIVDNIIKDI 872
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1151 SEMQKKINEIENLKNELK---NKELTLEHMETERLELAQKLNENYEEVKSITKERKVLKE-LQKSFETERDHLRGYIREI 1226
Cdd:PTZ00440 873 ENMNKNINIIKTLNIAINrsnSNKQLVEHLLNNKIDLKNKLEQHMKIINTDNIIQKNEKLnLLNNLNKEKEKIEKQLSDT 952
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1227 EATGLQTK-EELKIAHIHLKEHQET-----IDELRRSVSEKTAQIINTQDLEKSHTKLQEEIPVLHEEQELLPNVKEVSE 1300
Cdd:PTZ00440 953 KINNLKMQiEKTLEYYDKSKENINGndgthLEKLDKEKDEWEHFKSEIDKLNVNYNILNKKIDDLIKKQHDDIIELIDKL 1032
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1301 TQETMNELELLTEQ---STTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKErdnlktiKEALEVKHDQLKEHIRETLA 1377
Cdd:PTZ00440 1033 IKEKGKEIEEKVDQyisLLEKMKTKLSSFHFNIDIKKYKNPKIKEEIKLLEEK-------VEALLKKIDENKNKLIEIKN 1105
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1378 KIQEsqskqeqslNMKEKDNETTKivsEMEQFKPKDSALLRIEIEMLGLSKRLQESHDEmksvakekddLQRLQEVLQSE 1457
Cdd:PTZ00440 1106 KSHE---------HVVNADKEKNK---QTEHYNKKKKSLEKIYKQMEKTLKELENMNLE----------DITLNEVNEIE 1163
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1458 SDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQ--NKIQEIYEKEEqf 1535
Cdd:PTZ00440 1164 IEYERILIDHIVEQINNEAKKSKTIMEEIESYKKDIDQVKKNMSKERNDHLTTFEYNAYYDKATAsyENIEELTTEAK-- 1241
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1536 NIKQISEVQEKVNELKQFKEhrkakdsalqsieskmlELTNRLQESQEEIQIMIKEKEEMKRVQEALQIerDQLKENTKE 1615
Cdd:PTZ00440 1242 GLKGEANRSTNVDELKEIKL-----------------QVFSYLQQVIKENNKMENALHEIKNMYEFLIS--IDSEKILKE 1302
|
1210 1220 1230 1240 1250 1260 1270 1280
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1616 IVAKMKESQEKEyqflkmtavNETQEKMCEIEHLKEQFETQKLNLENIETENirltqilHENLEEmRSVTKERDDLRSVE 1695
Cdd:PTZ00440 1303 ILNSTKKAEEFS---------NDAKKELEKTDNLIKQVEAKIEQAKEHKNKI-------YGSLED-KQIDDEIKKIEQIK 1365
|
1290 1300 1310 1320 1330 1340 1350 1360
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1696 ETLKVERDQLKENLREtiTRDLKIQEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNaKLQEKIQELKAN 1775
Cdd:PTZ00440 1366 EEISNKRKEINKYLSN--IKSNKEKCDLHVRNASRGKDKIDFLNKHEAIEPSNSKEVNIIKITDNIN-KCKQYSNEAMET 1442
|
1370 1380 1390 1400 1410 1420 1430 1440
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1776 EHQLITLKKDVNETQKKVSEM----------EQLKKQIKDQSLTLSKLEIENLNLAQKLHeNLEEMKSVMKERDNLRRVE 1845
Cdd:PTZ00440 1443 ENKADENNDSIIKYEKEITNIlnnssilgkkTKLEKKKKEATNIMDDINGEHSIIKTKLT-KSSEKLNQLNEQPNIKREG 1521
|
1450 1460 1470 1480 1490 1500 1510 1520
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1846 ETLKLERDQLKESLQETKARDLEiQQELKTARMlskehKETVDKLREKISEKTIQISDIQK-DLDKSKDELQKKIQELQK 1924
Cdd:PTZ00440 1522 DVLNNDKSTIAYETIQYNLGRVK-HNLLNILNI-----KDEIETILNKAQDLMRDISKISKiVENKNLENLNDKEADYVK 1595
|
1530 1540 1550
....*....|....*....|....*....|..
gi 767930917 1925 KELQLLRVKEDVNMSHKKINEMEQLKKQFEAQ 1956
Cdd:PTZ00440 1596 YLDNILKEKQLMEAEYKKLNEIYSDVDNIEKE 1627
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
313-941 |
5.52e-03 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 42.20 E-value: 5.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 313 FDETLTALQFASTAKYMKN-----TPYVNEVSTDEALLKRYRKEIMDLKKQLEEVsletraQAMEKDQLAQLLEEKDLLQ 387
Cdd:PRK01156 155 LDEILEINSLERNYDKLKDvidmlRAEISNIDYLEEKLKSSNLELENIKKQIADD------EKSHSITLKEIERLSIEYN 228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 388 KVQNEKI---ENLTRMLVTSSSLTLQQELKAKRKRRVTWCLGKINKMKNSnyadqfniptnitTKTHKLSINLLREIDES 464
Cdd:PRK01156 229 NAMDDYNnlkSALNELSSLEDMKNRYESEIKTAESDLSMELEKNNYYKEL-------------EERHMKIINDPVYKNRN 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 465 VCSESDVFSNTLDTLSEIewnpatkllnQENIESELNSlradYDNLVLDYEQLRTEKEEMELKLKEKNDLDEfEALERKT 544
Cdd:PRK01156 296 YINDYFKYKNDIENKKQI----------LSNIDAEINK----YHAIIKKLSVLQKDYNDYIKKKSRYDDLNN-QILELEG 360
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 545 KKDQEMQLIHEISNLKNLVKHAEVYNQDLENELSSKVELLREKEDQIKKLQEYIDSqKLENIKMDLSYSLESIEDPKQMK 624
Cdd:PRK01156 361 YEMDYNSYLKSIESLKKKIEEYSKNIERMSAFISEILKIQEIDPDAIKKELNEINV-KLQDISSKVSSLNQRIRALRENL 439
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 625 QTLfdAETVALDAKRESAFLRSENLElKEKMKELATTYKQMENDIQlyqsqlEAKKKMQVDLEKELQSAFNEITKLTSLI 704
Cdd:PRK01156 440 DEL--SRNMEMLNGQSVCPVCGTTLG-EEKSNHIINHYNEKKSRLE------EKIREIEIEVKDIDEKIVDLKKRKEYLE 510
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 705 DGKVPKDLLCNLELEGKITDLQKELNKEVEENEALREEVILLSELKSLPSEVERLRKE------IQDKSEELHIITSEKD 778
Cdd:PRK01156 511 SEEINKSINEYNKIESARADLEDIKIKINELKDKHDKYEEIKNRYKSLKLEDLDSKRTswlnalAVISLIDIETNRSRSN 590
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 779 KLFSEVVHKESRVQGLLEEIgktKDDLATTQSNYKSTDQEFQNFKTLHMDFEQKYKMVleenERMNQEIVNLSKEAQKFD 858
Cdd:PRK01156 591 EIKKQLNDLESRLQEIEIGF---PDDKSYIDKSIREIENEANNLNNKYNEIQENKILI----EKLRGKIDNYKKQIAEID 663
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 859 SSLGALKtELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQ 938
Cdd:PRK01156 664 SIIPDLK-EITSRINDIEDNLKKSRKALDDAKANRARLESTIEILRTRINELSDRINDINETLESMKKIKKAIGDLKRLR 742
|
...
gi 767930917 939 ESL 941
Cdd:PRK01156 743 EAF 745
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
493-702 |
6.02e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 41.74 E-value: 6.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 493 QENIESELNSLRADYDNLVLDYEQLRTEKEEMELKLKEKNdlDEFEALERKTKKDQEmqliheisNLKNLVKHAevYNQD 572
Cdd:COG3883 32 LEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQ--AEIAEAEAEIEERRE--------ELGERARAL--YRSG 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 573 lenELSSKVELLREKEDqikkLQEYIDsqKLENIKMDLSYSLESIEDPKQMKQTLFDAETVALDAKREsafLRSENLELK 652
Cdd:COG3883 100 ---GSVSYLDVLLGSES----FSDFLD--RLSALSKIADADADLLEELKADKAELEAKKAELEAKLAE---LEALKAELE 167
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 767930917 653 EKMKELATTYKQMENDIQLYQSQLEAKKKMQVDLEKELQSAFNEITKLTS 702
Cdd:COG3883 168 AAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAA 217
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
1327-1609 |
6.22e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 41.92 E-value: 6.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1327 EMERLrLNEKFQESQEEIKSLTKERDNlktIKEALEVKHDQLKEhiretlakiQESQSKQeqslNMKEKDNETTKIVSEM 1406
Cdd:PHA02562 167 EMDKL-NKDKIRELNQQIQTLDMKIDH---IQQQIKTYNKNIEE---------QRKKNGE----NIARKQNKYDELVEEA 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1407 EQFKPkdsallriEIEMLglskrlqesHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIvAKHLETEEELKVAHCCL 1486
Cdd:PHA02562 230 KTIKA--------EIEEL---------TDELLNLVMDIEDPSAALNKLNTAAAKIKSKIEQF-QKVIKMYEKGGVCPTCT 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1487 KEQEETINELrvnlSEKETEISTIQKQLEAINDKlqnkIQEIYEKEEQFNiKQISEVQEKVNELKQFKEHRKAKDSALQS 1566
Cdd:PHA02562 292 QQISEGPDRI----TKIKDKLKELQHSLEKLDTA----IDELEEIMDEFN-EQSKKLLELKNKISTNKQSLITLVDKAKK 362
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 767930917 1567 IESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQL 1609
Cdd:PHA02562 363 VKAAIEELQAEFVDNAEELAKLQDELDKIVKTKSELVKEKYHR 405
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
1670-1932 |
6.99e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 41.43 E-value: 6.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1670 LTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETITRDLKIQEELRIAHMHLKEQQETIDKLRGIVSEKTD 1749
Cdd:COG4372 29 LSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQE 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1750 KLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQLKKQIKDQ--SLTLSKLEIENLNLAQKLHEN 1827
Cdd:COG4372 109 EAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEElaALEQELQALSEAEAEQALDEL 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1828 LEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKD 1907
Cdd:COG4372 189 LKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEELELAIL 268
|
250 260
....*....|....*....|....*
gi 767930917 1908 LDKSKDELQKKIQELQKKELQLLRV 1932
Cdd:COG4372 269 VEKDTEEEELEIAALELEALEEAAL 293
|
|
| PRK00409 |
PRK00409 |
recombination and DNA strand exchange inhibitor protein; Reviewed |
1734-1884 |
7.00e-03 |
|
recombination and DNA strand exchange inhibitor protein; Reviewed
Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 41.74 E-value: 7.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1734 QETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQLKKQikdqsltlskl 1813
Cdd:PRK00409 501 ENIIEEAKKLIGEDKEKLNELIASLEELERELEQKAEEAEALLKEAEKLKEELEEKKEKLQEEEDKLLE----------- 569
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 767930917 1814 eienlNLAQKLHENLEEMKSVmkerdnlrrVEETLKLERDQLKESLQETKARDL-EIQQELKTARMLSKEHK 1884
Cdd:PRK00409 570 -----EAEKEAQQAIKEAKKE---------ADEIIKELRQLQKGGYASVKAHELiEARKRLNKANEKKEKKK 627
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
823-1476 |
7.02e-03 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 42.13 E-value: 7.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 823 KTLHMDFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERL----NEMEQLKEQLEN 898
Cdd:pfam12128 286 AELNQLLRTLDDQWKEKRDELNGELSAADAAVAKDRSELEALEDQHGAFLDADIETAAADQEQLpswqSELENLEERLKA 365
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 899 RDSTLQTVERE----KTLITEKLQQTLEE------------VKTLTQEKDDLKQLQESLQIERDQLKSDIHDTvnmnidt 962
Cdd:pfam12128 366 LTGKHQDVTAKynrrRSKIKEQNNRDIAGikdklakirearDRQLAVAEDDLQALESELREQLEAGKLEFNEE------- 438
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 963 QEQLRNALESLKQHQETIntlksKISEEVSRNLHMEENTGETKDEFQQKMvgidKKQDLEAKNTQTLTADVKDNEIIEQQ 1042
Cdd:pfam12128 439 EYRLKSRLGELKLRLNQA-----TATPELLLQLENFDERIERAREEQEAA----NAEVERLQSELRQARKRRDQASEALR 509
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1043 RKIFSLIQEKNELQQMLESVIAEKEQLKTDLkeNIEMTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRL 1122
Cdd:pfam12128 510 QASRRLEERQSALDELELQLFPQAGTLLHFL--RKEAPDWEQSIGKVISPELLHRTDLDPEVWDGSVGGELNLYGVKLDL 587
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1123 AEV--------EEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKIN-EIENLKNE-------LKNKELTLEHMETERLELAQ 1186
Cdd:pfam12128 588 KRIdvpewaasEEELRERLDKAEEALQSAREKQAAAEEQLVQANgELEKASREetfartaLKNARLDLRRLFDEKQSEKD 667
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1187 KLNENY--------EEVKSITKERKVLKELQKSFeteRDHLRGYIREieatglqtkeelkiahiHLKEHQETIDELRRSV 1258
Cdd:pfam12128 668 KKNKALaerkdsanERLNSLEAQLKQLDKKHQAW---LEEQKEQKRE-----------------ARTEKQAYWQVVEGAL 727
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1259 SEKTAQIinTQDLEKSHTKLQEEIPVLHEEQELLPNVKEVSEtqetMNELELLTEQSTTkdSTTLARIEMERLRLNEKFQ 1338
Cdd:pfam12128 728 DAQLALL--KAAIAARRSGAKAELKALETWYKRDLASLGVDP----DVIAKLKREIRTL--ERKIERIAVRRQEVLRYFD 799
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1339 ESQEEIKSltkERDNLKTIKEALEvkhdQLKEHIRETLAKIQESQSKQEQSLNMKEKDNETTKIVSEMEQFKpkdsalLR 1418
Cdd:pfam12128 800 WYQETWLQ---RRPRLATQLSNIE----RAISELQQQLARLIADTKLRRAKLEMERKASEKQQVRLSENLRG------LR 866
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 767930917 1419 IEIEMLGLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLK---ENIKEIVAKHLETE 1476
Cdd:pfam12128 867 CEMSKLATLKEDANSEQAQGSIGERLAQLEDLKLKRDYLSESVKkyvEHFKNVIADHSGSG 927
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1859-2015 |
7.58e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 40.68 E-value: 7.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1859 LQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKDLDKSKDELQKKIQELQKKELQLLRVKedvnm 1938
Cdd:COG1579 12 LQELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVR----- 86
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 767930917 1939 shkKINEMEQLKKQFEAQNLSMQSVRMDNFQLTKKLHESLEEIRIVAKERDELRRIKESLKMERDQFIATLREMIAR 2015
Cdd:COG1579 87 ---NNKEYEALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEE 160
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
556-931 |
7.59e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 41.65 E-value: 7.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 556 ISNLKNLVKHAEVYNQDLENELSSKVELLREKEDQIKKLQEYIDSQKLE------NIKMDLSYSLESIEDPKQMKQTLFD 629
Cdd:pfam17380 271 LNQLLHIVQHQKAVSERQQQEKFEKMEQERLRQEKEEKAREVERRRKLEeaekarQAEMDRQAAIYAEQERMAMEREREL 350
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 630 AETVALDAKRESAFLRSENLELK-EKMKELATTYKQMENDIQLYQSQLEAKKKMQVdLEKELQSafneitkltslidgkv 708
Cdd:pfam17380 351 ERIRQEERKRELERIRQEEIAMEiSRMRELERLQMERQQKNERVRQELEAARKVKI-LEEERQR---------------- 413
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 709 pkdllcnlelegKITDLQKELNK-EVEENEALREEVILLSELKSlpSEVERLRKEIQDKSEELHII--TSEKDKLFSEVV 785
Cdd:pfam17380 414 ------------KIQQQKVEMEQiRAEQEEARQREVRRLEEERA--REMERVRLEEQERQQQVERLrqQEEERKRKKLEL 479
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 786 HKESRVQGLLEEIgktkddlattqsNYKSTDQEFQNFKTLHMDFEQKYKMVLEENERMNQEIVnlskeaqkfdsslgalK 865
Cdd:pfam17380 480 EKEKRDRKRAEEQ------------RRKILEKELEERKQAMIEEERKRKLLEKEMEERQKAIY----------------E 531
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 767930917 866 TELSYKTQELQEKTREVQERLNEMEQLKEQLENRdSTLQTVEREKTLI-----TEKLQQTLEEVKTLTQEK 931
Cdd:pfam17380 532 EERRREAEEERRKQQEMEERRRIQEQMRKATEER-SRLEAMEREREMMrqiveSEKARAEYEATTPITTIK 601
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1635-2015 |
7.91e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 41.68 E-value: 7.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1635 AVNETQEKMCEIEHLKEQFETQKLNLENIETENIRLTQILhENLEEMRSVTKERDDLRSVEETLKVERDQLKEnLRETIT 1714
Cdd:COG4717 79 ELKEAEEKEEEYAELQEELEELEEELEELEAELEELREEL-EKLEKLLQLLPLYQELEALEAELAELPERLEE-LEERLE 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1715 RDLKIQEELRIAHMHLKEQQETIDKLRGIVSEKTDK-LSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDVNETQKKV 1793
Cdd:COG4717 157 ELRELEEELEELEAELAELQEELEELLEQLSLATEEeLQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENEL 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1794 sEMEQLKKQIKDQS---------LTLSKLEIENLNLAQKLHENLEEMKSVM-KERDNLRRVEETLKLERDQLKESLQETK 1863
Cdd:COG4717 237 -EAAALEERLKEARlllliaaalLALLGLGGSLLSLILTIAGVLFLVLGLLaLLFLLLAREKASLGKEAEELQALPALEE 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1864 ARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKDLDKSK-DELQKKIQELQKK-----ELQLLRVKEDVN 1937
Cdd:COG4717 316 LEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQlEELEQEIAALLAEagvedEEELRAALEQAE 395
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1938 MSHKKINEMEQLKKQFEAQNLSMQSV--RMDNFQLTKKLHESLEEIRIVAKERDELRRIKESLK-----MERDQFIATLR 2010
Cdd:COG4717 396 EYQELKEELEELEEQLEELLGELEELleALDEEELEEELEELEEELEELEEELEELREELAELEaeleqLEEDGELAELL 475
|
....*
gi 767930917 2011 EMIAR 2015
Cdd:COG4717 476 QELEE 480
|
|
| ATG17_like |
pfam04108 |
Autophagy protein ATG17-like domain; This domain is found in the autophagy-related proteins ... |
1345-1553 |
8.39e-03 |
|
Autophagy protein ATG17-like domain; This domain is found in the autophagy-related proteins ATG17 and ATG11, conserved across eukaryotes. ATG17 forms a complex with ATG29 and ATG31, critical for both PAS (preautophagosomal structure) formation and autophagy. Together with ATG13, it is required for ATG1 kinase activation. ATG11 is a scaffold protein required for the cytoplasm-to-vacuole targeting (Cvt) pathway during starvation and to recruit ATG proteins to the pre-autophagosome. It is also required for ATG1 kinase activation. In many eukaryotes, ATG11 (the orthologue in mammals is RB1-inducible coiled-coil protein 1 (RB1CC1) and in S. pombe is Taz1-interacting factor 1 (taf1)) is essential for bulk autophagy, except in S.cerevisiae. ATG17 and ATG11 are large similar proteins, both predicted to be almost entirely helical, containing conserved coiled-coil regions and lack obvious functional motifs.
Pssm-ID: 427715 [Multi-domain] Cd Length: 360 Bit Score: 41.22 E-value: 8.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1345 KSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQSLNMKEKDNETTKIVSEMEQfkpkdsallrIEIEML 1424
Cdd:pfam04108 112 DSVEILRDALKELIDELQAAQESLDSDLKRFDDDLRDLQKELESLSSPSESISLIPTLLKELES----------LEEEMA 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1425 GLSKRLQESHDE-MKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNLSek 1503
Cdd:pfam04108 182 SLLESLTNHYDQcVTAVKLTEGGRAEMLEVLENDARELDDVVPELQDRLDEMENNYERLQKLLEQKNSLIDELLSALQ-- 259
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 767930917 1504 etEISTIQKQLEAINDKLQnKIQEIYEKEEQFNIKQISEVQEKVNELKQF 1553
Cdd:pfam04108 260 --LIAEIQSRLPEYLAALK-EFEERWEEEKETIEDYLSELEDLREFYEGF 306
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
837-948 |
8.58e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 41.86 E-value: 8.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 837 LEENERMNQEIVNLSKE-----AQKFDSS--LGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVE-- 907
Cdd:COG3096 524 LEQRLRQQQNAERLLEEfcqriGQQLDAAeeLEELLAELEAQLEELEEQAAEAVEQRSELRQQLEQLRARIKELAARApa 603
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 908 -----------REKT--------LITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQL 948
Cdd:COG3096 604 wlaaqdalerlREQSgealadsqEVTAAMQQLLEREREATVERDELAARKQALESQIERL 663
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
511-1165 |
8.94e-03 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 41.49 E-value: 8.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 511 VLDYEQLRTEKEEMELKLKEKNDLDEFEALERKTKKDQEM-QLIHEISNLKNLVKHAEVYNQDLENE-----LSSKVELL 584
Cdd:TIGR00618 223 VLEKELKHLREALQQTQQSHAYLTQKREAQEEQLKKQQLLkQLRARIEELRAQEAVLEETQERINRArkaapLAAHIKAV 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 585 REKEDQIKKLQEYIDSQKLENIKMDLSYSL-----ESIEDPKQMKQTLFDAETVALDAKRESAFLR---SENLELKEKMK 656
Cdd:TIGR00618 303 TQIEQQAQRIHTELQSKMRSRAKLLMKRAAhvkqqSSIEEQRRLLQTLHSQEIHIRDAHEVATSIReisCQQHTLTQHIH 382
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 657 ELATTYKQMENDIQLYQSQLEAKKKMQVDLEKELQSAFNEITKLTSLIDGKVPK---DLLCNLELEGKITDLQKELNKEV 733
Cdd:TIGR00618 383 TLQQQKTTLTQKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQqryAELCAAAITCTAQCEKLEKIHLQ 462
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 734 EENEALREEVILLSELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHK----------ESRVQGLLEEIGKTKD 803
Cdd:TIGR00618 463 ESAQSLKEREQQLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPArqdidnpgplTRRMQRGEQTYAQLET 542
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 804 DLATTQSNYKSTDQEFQNFKTLHMDFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQ 883
Cdd:TIGR00618 543 SEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHALLRKLQ 622
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 884 ERLNEME--QLKEQLENRDSTLQTV--EREKTLITEKLQQTLEEVKTLTQEKDDLKQLQES-LQIERDQLKSDIHDTVNM 958
Cdd:TIGR00618 623 PEQDLQDvrLHLQQCSQELALKLTAlhALQLTLTQERVREHALSIRVLPKELLASRQLALQkMQSEKEQLTYWKEMLAQC 702
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 959 NIDTQEQLRNALESLKQHQETINTLKSKISEEVSRNLHMEENTGETKDEFQQKmvgidkkqdleakntqtLTADVKDNEI 1038
Cdd:TIGR00618 703 QTLLRELETHIEEYDREFNEIENASSSLGSDLAAREDALNQSLKELMHQARTV-----------------LKARTEAHFN 765
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1039 IEQQRKIfsLIQEKNELQQMLESVIAEKEQLKTDLKENIEMTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRT 1118
Cdd:TIGR00618 766 NNEEVTA--ALQTGAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSAT 843
|
650 660 670 680
....*....|....*....|....*....|....*....|....*..
gi 767930917 1119 CDRLAEVEEKLKEKSQQLQEKQQQllnvQEEMSEMQKKINEIENLKN 1165
Cdd:TIGR00618 844 LGEITHQLLKYEECSKQLAQLTQE----QAKIIQLSDKLNGINQIKI 886
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
744-1100 |
9.01e-03 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 41.58 E-value: 9.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 744 ILLSELKSLPSEVERLRKEIQDKsEELHIITSEKDKLFSEVVHKesrVQGLLEEIGKTKDDLATTQSNYKSTDqefqNFK 823
Cdd:PRK10929 7 FLMAWLLSWGAYAATAPDEKQIT-QELEQAKAAKTPAQAEIVEA---LQSALNWLEERKGSLERAKQYQQVID----NFP 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 824 TLHMDFEQKyKMVLEENER---MNQEIVNLSKEAQKFDSSLgalkTELSYKTQELQEKTREVQERLNEMEQL----KEQL 896
Cdd:PRK10929 79 KLSAELRQQ-LNNERDEPRsvpPNMSTDALEQEILQVSSQL----LEKSRQAQQEQDRAREISDSLSQLPQQqteaRRQL 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 897 ENRDSTLQTVEREKTLITE---KLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIHDTVNMNIDTQ-EQLRNALES 972
Cdd:PRK10929 154 NEIERRLQTLGTPNTPLAQaqlTALQAESAALKALVDELELAQLSANNRQELARLRSELAKKRSQQLDAYlQALRNQLNS 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 973 LKQhQETINTLKS--KISEE-------VSRNLHMEENTGETKDEFQQKMVGIDKKQDLEAKNT----QTLtadvkdNEII 1039
Cdd:PRK10929 234 QRQ-REAERALESteLLAEQsgdlpksIVAQFKINRELSQALNQQAQRMDLIASQQRQAASQTlqvrQAL------NTLR 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1040 EQQ-------------RKIFSLIQEKNELQQmLESVIA-------------EKEQLKTDLKENIEMTIENQEElRLLGDE 1093
Cdd:PRK10929 307 EQSqwlgvsnalgealRAQVARLPEMPKPQQ-LDTEMAqlrvqrlryedllNKQPQLRQIRQADGQPLTAEQN-RILDAQ 384
|
....*..
gi 767930917 1094 LKKQQEI 1100
Cdd:PRK10929 385 LRTQREL 391
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1645-1816 |
9.10e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 40.90 E-value: 9.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1645 EIEHLKEQFETQKLNLENIETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETI----------- 1713
Cdd:COG4942 42 ELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELAELLralyrlgrqpp 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1714 ----------TRDLKIQEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQ----L 1779
Cdd:COG4942 122 lalllspedfLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAELEEERAALEALKAErqklL 201
|
170 180 190
....*....|....*....|....*....|....*..
gi 767930917 1780 ITLKKDVNETQKKVSEMEQLKKQIKDQSLTLSKLEIE 1816
Cdd:COG4942 202 ARLEKELAELAAELAELQQEAEELEALIARLEAEAAA 238
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
1126-1961 |
9.13e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 41.70 E-value: 9.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1126 EEKLKEKSQQLQEKQQQLLNVQEEMSEMQKK---------------------INEIENLKNELKNKELTLE--------- 1175
Cdd:pfam01576 4 EEEMQAKEEELQKVKERQQKAESELKELEKKhqqlceeknalqeqlqaetelCAEAEEMRARLAARKQELEeilhelesr 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1176 ---------HMETERLELAQK---LNENYEE------------------VKSITKERKVLKELQKSFETERDHLRGYIRE 1225
Cdd:pfam01576 84 leeeeersqQLQNEKKKMQQHiqdLEEQLDEeeaarqklqlekvtteakIKKLEEDILLLEDQNSKLSKERKLLEERISE 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1226 IEATGLQTKEELKIAHIHLKEHQETIDEL--RRSVSEKTaqiinTQDLEKSHTKLQEEIPVLHEEQELLPNVKEVSETQE 1303
Cdd:pfam01576 164 FTSNLAEEEEKAKSLSKLKNKHEAMISDLeeRLKKEEKG-----RQELEKAKRKLEGESTDLQEQIAELQAQIAELRAQL 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1304 TMNELELLTEQSTTKDSTTLARIEMERLR-LNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETL---AKI 1379
Cdd:pfam01576 239 AKKEEELQAALARLEEETAQKNNALKKIReLEAQISELQEDLESERAARNKAEKQRRDLGEELEALKTELEDTLdttAAQ 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1380 QESQSKQEQSLNMKEK--DNETTKIVSEMEQFKPKDSALLRIEIEMLGLSKRLQESHDEMK-SVAKEKDDLQ-RLQEVLQ 1455
Cdd:pfam01576 319 QELRSKREQEVTELKKalEEETRSHEAQLQEMRQKHTQALEELTEQLEQAKRNKANLEKAKqALESENAELQaELRTLQQ 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1456 SESD------QLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNkIQEIY 1529
Cdd:pfam01576 399 AKQDsehkrkKLEGQLQELQARLSESERQRAELAEKLSKLQSELESVSSLLNEAEGKNIKLSKDVSSLESQLQD-TQELL 477
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1530 EKEEQFNIKQISevqekvnELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQL 1609
Cdd:pfam01576 478 QEETRQKLNLST-------RLRQLEDERNSLQEQLEEEEEAKRNVERQLSTLQAQLSDMKKKLEEDAGTLEALEEGKKRL 550
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1610 KentKEIVAKMKESQEKEYQFLKMTAVNETQEKmcEIEHLKEQFETQKLNLENIETENIRLTQILHENleemrsvtkerd 1689
Cdd:pfam01576 551 Q---RELEALTQQLEEKAAAYDKLEKTKNRLQQ--ELDDLLVDLDHQRQLVSNLEKKQKKFDQMLAEE------------ 613
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1690 dlRSVEETLKVERDQLKENLRETITRDLKIQEELRIAHMHLKEQQETIDKLRG----IVSEKTDKLSNMQkDLENSNAKL 1765
Cdd:pfam01576 614 --KAISARYAEERDRAEAEAREKETRALSLARALEEALEAKEELERTNKQLRAemedLVSSKDDVGKNVH-ELERSKRAL 690
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1766 QEKIQELKANEHQLitlkkdvnETQKKVSEMEQLKKQIKDQSLtlsKLEIENlNLAQKLHENLEEMKSVMKErdnLRRVE 1845
Cdd:pfam01576 691 EQQVEEMKTQLEEL--------EDELQATEDAKLRLEVNMQAL---KAQFER-DLQARDEQGEEKRRQLVKQ---VRELE 755
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1846 ETLKLERDQLKESLQETKARDLEIQQELKTARMLSKEHKETVDKLRekisEKTIQISDIQKDLDK---SKDELQKKIQEL 1922
Cdd:pfam01576 756 AELEDERKQRAQAVAAKKKLELDLKELEAQIDAANKGREEAVKQLK----KLQAQMKDLQRELEEaraSRDEILAQSKES 831
|
890 900 910 920
....*....|....*....|....*....|....*....|...
gi 767930917 1923 QKK----ELQLLRVKEDVNMShkkinemEQLKKQFEAQNLSMQ 1961
Cdd:pfam01576 832 EKKlknlEAELLQLQEDLAAS-------ERARRQAQQERDELA 867
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
1501-1626 |
9.24e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 41.30 E-value: 9.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1501 SEKETEISTIQKQLEAiNDKLQNKIQEIyekEEQFNIKQiSEVQEKVNELKQFKEHRKAKDSALQSIESKMLELTNRLQE 1580
Cdd:PRK12704 47 AKKEAEAIKKEALLEA-KEEIHKLRNEF---EKELRERR-NELQKLEKRLLQKEENLDRKLELLEKREEELEKKEKELEQ 121
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1581 SQEEIQIMIKEKEEMKRVQ-------------EALQIERDQLKENTK-EIVAKMKESQEK 1626
Cdd:PRK12704 122 KQQELEKKEEELEELIEEQlqelerisgltaeEAKEILLEKVEEEARhEAAVLIKEIEEE 181
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
1823-2056 |
9.44e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 41.15 E-value: 9.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1823 KLHENLEEMKSVMKERDNlrrVEETLKLERDQLKESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQIS 1902
Cdd:PHA02562 175 KIRELNQQIQTLDMKIDH---IQQQIKTYNKNIEEQRKKNGENIARKQNKYDELVEEAKTIKAEIEELTDELLNLVMDIE 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1903 DIQKDLDKSKDELQKKIQELQkkelqllRVKEDVNMsHKKINEMEQLKKQFEAQNLSMQSVRMDNFQLTKKLHESLEEIR 1982
Cdd:PHA02562 252 DPSAALNKLNTAAAKIKSKIE-------QFQKVIKM-YEKGGVCPTCTQQISEGPDRITKIKDKLKELQHSLEKLDTAID 323
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 767930917 1983 IVAKERDELRRIKESLKMERDQFIATLREMIARDRQNHQVKPEKRLLSDGQQHLTESLREKCSRIKELLKRYSE 2056
Cdd:PHA02562 324 ELEEIMDEFNEQSKKLLELKNKISTNKQSLITLVDKAKKVKAAIEELQAEFVDNAEELAKLQDELDKIVKTKSE 397
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
1326-1543 |
9.59e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 41.45 E-value: 9.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1326 IEMERLR-LNEKFQESQEEIKSLTKERDNLKTIKEALEV----KHDQLKEHIRETLAKIQESQSKQEQSLNmkEKDNETT 1400
Cdd:PRK05771 40 LSNERLRkLRSLLTKLSEALDKLRSYLPKLNPLREEKKKvsvkSLEELIKDVEEELEKIEKEIKELEEEIS--ELENEIK 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1401 KIVSEMEQFKP-KDsalLRIEIEMLGLSKRLQ--------------ESHDEMKSVAKEKDDLQRLQEVLQSESDQLKEnI 1465
Cdd:PRK05771 118 ELEQEIERLEPwGN---FDLDLSLLLGFKYVSvfvgtvpedkleelKLESDVENVEYISTDKGYVYVVVVVLKELSDE-V 193
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 767930917 1466 KEIVAKHLETEEELKVahccLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEqfNIKQISEV 1543
Cdd:PRK05771 194 EEELKKLGFERLELEE----EGTPSELIREIKEELEEIEKERESLLEELKELAKKYLEELLALYEYLE--IELERAEA 265
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
873-1161 |
9.65e-03 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 41.43 E-value: 9.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 873 QELQEKTREVQERLNEMEQLKE-QLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSD 951
Cdd:PLN02939 106 EAIAAIDNEQQTNSKDGEQLSDfQLEDLVGMIQNAEKNILLLNQARLQALEDLEKILTEKEALQGKINILEMRLSETDAR 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 952 IHDTVNMNIDTQ---EQLRNALESLKQHQETINTLKSKISEEVSrnLHMEENtgetkdefqqkmvgIDKKQDLEAKNTQT 1028
Cdd:PLN02939 186 IKLAAQEKIHVEileEQLEKLRNELLIRGATEGLCVHSLSKELD--VLKEEN--------------MLLKDDIQFLKAEL 249
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767930917 1029 LtadvkdnEIIEQQRKIFSLIQEKNELQ---QMLES--VIAEKEQLKTDLKEnIEMTIENQEELRLLGDELKKQQE--IV 1101
Cdd:PLN02939 250 I-------EVAETEERVFKLEKERSLLDaslRELESkfIVAQEDVSKLSPLQ-YDCWWEKVENLQDLLDRATNQVEkaAL 321
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 767930917 1102 AQEKNHAIKkegelsrtcDRLAEVEEKLKEksqqlqekqqqlLNVQEEMSE----MQKKINEIE 1161
Cdd:PLN02939 322 VLDQNQDLR---------DKVDKLEASLKE------------ANVSKFSSYkvelLQQKLKLLE 364
|
|
| |
