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Conserved domains on  [gi|768006881|ref|XP_011524830|]
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proline and serine-rich protein 3 isoform X1 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK12323 super family cl46901
DNA polymerase III subunit gamma/tau;
400-519 6.76e-07

DNA polymerase III subunit gamma/tau;


The actual alignment was detected with superfamily member PRK14951:

Pssm-ID: 481241 [Multi-domain]  Cd Length: 618  Bit Score: 52.79  E-value: 6.76e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881 400 PPTQQASTLAHLGSTLAPPASLASTLEPPASTPAPLASTLAPPASTPAPLA-CTPAPPASTLASPAVPQGLPI------- 471
Cdd:PRK14951 366 PAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAApPAAAPPAPVAAPAAAAPAAAPaaapaav 445

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 768006881 472 ---PDPSSCAQPKSLGPKSRRSRAPRPEAAEQVPAAGQGPGPQLRGVLGQV 519
Cdd:PRK14951 446 alaPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEEGDV 496
PHA03247 super family cl33720
large tegument protein UL36; Provisional
 269-623 3.52e-06

large tegument protein UL36; Provisional


The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 51.09  E-value: 3.52e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881  269 PAPAPASSQAPLRPEDdilyqwrqrRKLEQAQGSKGDRAWVPPLTPALRTLI-----SLICLQTSPAPVETLSSLGTQPN 343
Cdd:PHA03247 2560 PPAAPDRSVPPPRPAP---------RPSEPAVTSRARRPDAPPQSARPRAPVddrgdPRGPAPPSPLPPDTHAPDPPPPS 2630

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881  344 HVPLWSSVAQPGPPEAFYVERPPF----PSVSSPHIFWAPSSHGFFWAPQSGpWVSLGAVPPTQQASTLAHLGSTLAPPA 419
Cdd:PHA03247 2631 PSPAANEPDPHPPPTVPPPERPRDdpapGRVSRPRRARRLGRAAQASSPPQR-PRRRAARPTVGSLTSLADPPPPPPTPE 2709

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881  420 SLASTLEPPASTP-APLASTLAPPASTPAPLACTPAPPASTLASPAVPQGLPIPDPSSCAQPKSLGPKSRRSRAPRPEAA 498
Cdd:PHA03247 2710 PAPHALVSATPLPpGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVA 2789

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881  499 EQVPAAGQGPGPQlrgVLGQVVAARLFPDSLEDTPPHFEGPPPPKAGSpkVQATQPQTKVTPPPSESQC----------- 567
Cdd:PHA03247 2790 SLSESRESLPSPW---DPADPPAAVLAPAAALPPAASPAGPLPPPTSA--QPTAPPPPPGPPPPSLPLGgsvapggdvrr 2864

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 768006881  568 RAKAESLKAKALPPAAGSVIRKSEATPSPGACLQPEVPLSPAEQATTVKASPPAFQ 623
Cdd:PHA03247 2865 RPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQ 2920
 
Name Accession Description Interval E-value
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 400-519 6.76e-07

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 52.79  E-value: 6.76e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881 400 PPTQQASTLAHLGSTLAPPASLASTLEPPASTPAPLASTLAPPASTPAPLA-CTPAPPASTLASPAVPQGLPI------- 471
Cdd:PRK14951 366 PAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAApPAAAPPAPVAAPAAAAPAAAPaaapaav 445

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 768006881 472 ---PDPSSCAQPKSLGPKSRRSRAPRPEAAEQVPAAGQGPGPQLRGVLGQV 519
Cdd:PRK14951 446 alaPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEEGDV 496
PHA03247 PHA03247
large tegument protein UL36; Provisional
 269-623 3.52e-06

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 51.09  E-value: 3.52e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881  269 PAPAPASSQAPLRPEDdilyqwrqrRKLEQAQGSKGDRAWVPPLTPALRTLI-----SLICLQTSPAPVETLSSLGTQPN 343
Cdd:PHA03247 2560 PPAAPDRSVPPPRPAP---------RPSEPAVTSRARRPDAPPQSARPRAPVddrgdPRGPAPPSPLPPDTHAPDPPPPS 2630

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881  344 HVPLWSSVAQPGPPEAFYVERPPF----PSVSSPHIFWAPSSHGFFWAPQSGpWVSLGAVPPTQQASTLAHLGSTLAPPA 419
Cdd:PHA03247 2631 PSPAANEPDPHPPPTVPPPERPRDdpapGRVSRPRRARRLGRAAQASSPPQR-PRRRAARPTVGSLTSLADPPPPPPTPE 2709

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881  420 SLASTLEPPASTP-APLASTLAPPASTPAPLACTPAPPASTLASPAVPQGLPIPDPSSCAQPKSLGPKSRRSRAPRPEAA 498
Cdd:PHA03247 2710 PAPHALVSATPLPpGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVA 2789

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881  499 EQVPAAGQGPGPQlrgVLGQVVAARLFPDSLEDTPPHFEGPPPPKAGSpkVQATQPQTKVTPPPSESQC----------- 567
Cdd:PHA03247 2790 SLSESRESLPSPW---DPADPPAAVLAPAAALPPAASPAGPLPPPTSA--QPTAPPPPPGPPPPSLPLGgsvapggdvrr 2864

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 768006881  568 RAKAESLKAKALPPAAGSVIRKSEATPSPGACLQPEVPLSPAEQATTVKASPPAFQ 623
Cdd:PHA03247 2865 RPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQ 2920
 
Name Accession Description Interval E-value
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 400-519 6.76e-07

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 52.79  E-value: 6.76e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881 400 PPTQQASTLAHLGSTLAPPASLASTLEPPASTPAPLASTLAPPASTPAPLA-CTPAPPASTLASPAVPQGLPI------- 471
Cdd:PRK14951 366 PAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAApPAAAPPAPVAAPAAAAPAAAPaaapaav 445

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 768006881 472 ---PDPSSCAQPKSLGPKSRRSRAPRPEAAEQVPAAGQGPGPQLRGVLGQV 519
Cdd:PRK14951 446 alaPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEEGDV 496
PHA03247 PHA03247
large tegument protein UL36; Provisional
 269-623 3.52e-06

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 51.09  E-value: 3.52e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881  269 PAPAPASSQAPLRPEDdilyqwrqrRKLEQAQGSKGDRAWVPPLTPALRTLI-----SLICLQTSPAPVETLSSLGTQPN 343
Cdd:PHA03247 2560 PPAAPDRSVPPPRPAP---------RPSEPAVTSRARRPDAPPQSARPRAPVddrgdPRGPAPPSPLPPDTHAPDPPPPS 2630

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881  344 HVPLWSSVAQPGPPEAFYVERPPF----PSVSSPHIFWAPSSHGFFWAPQSGpWVSLGAVPPTQQASTLAHLGSTLAPPA 419
Cdd:PHA03247 2631 PSPAANEPDPHPPPTVPPPERPRDdpapGRVSRPRRARRLGRAAQASSPPQR-PRRRAARPTVGSLTSLADPPPPPPTPE 2709

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881  420 SLASTLEPPASTP-APLASTLAPPASTPAPLACTPAPPASTLASPAVPQGLPIPDPSSCAQPKSLGPKSRRSRAPRPEAA 498
Cdd:PHA03247 2710 PAPHALVSATPLPpGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVA 2789

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881  499 EQVPAAGQGPGPQlrgVLGQVVAARLFPDSLEDTPPHFEGPPPPKAGSpkVQATQPQTKVTPPPSESQC----------- 567
Cdd:PHA03247 2790 SLSESRESLPSPW---DPADPPAAVLAPAAALPPAASPAGPLPPPTSA--QPTAPPPPPGPPPPSLPLGgsvapggdvrr 2864

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 768006881  568 RAKAESLKAKALPPAAGSVIRKSEATPSPGACLQPEVPLSPAEQATTVKASPPAFQ 623
Cdd:PHA03247 2865 RPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQ 2920
PHA03247 PHA03247
large tegument protein UL36; Provisional
 233-620 4.06e-06

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 50.71  E-value: 4.06e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881  233 SDGLSPFSETFIPDSSKGLGPRAPASPAPAQaqtptPAPAPASSQAPLRPEDDILYQWrqRRKLEQ-AQGSKGDRAwvPP 311
Cdd:PHA03247 2484 AEARFPFAAGAAPDPGGGGPPDPDAPPAPSR-----LAPAILPDEPVGEPVHPRMLTW--IRGLEElASDDAGDPP--PP 2554

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881  312 LTPALRTLI---SLICLQTSPAPVE-TLSSLGTQPNHVPLWSSVAQPG-PPEAFYVERPPFPSVSSPHIFWAPSSHGFFW 386
Cdd:PHA03247 2555 LPPAAPPAApdrSVPPPRPAPRPSEpAVTSRARRPDAPPQSARPRAPVdDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPA 2634

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881  387 APQSGPWVSLGAVPPTQQASTlahlgstlapPASLASTLEPPASTPAPLASTLAPPASTPAPLACTPAPPASTLASPAVP 466
Cdd:PHA03247 2635 ANEPDPHPPPTVPPPERPRDD----------PAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPP 2704

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881  467 QGLPIPDPS--SCAQPKSLGPKSRRSRAPRPEAAEQVPAAGQGPgpqlrgvlgqvvaarLFPDSLEDTPPHFEGPPPPKA 544
Cdd:PHA03247 2705 PPTPEPAPHalVSATPLPPGPAAARQASPALPAAPAPPAVPAGP---------------ATPGGPARPARPPTTAGPPAP 2769

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 768006881  545 GSPKVQATQPQTKVTPPPSESQCRAKAESLKAKALPPAAGSVIRKSEATPSPGACLQPEVPLSPAEQATTVKASPP 620
Cdd:PHA03247 2770 APPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGP 2845
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
397-609 1.52e-05

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 48.72  E-value: 1.52e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881 397 GAVPPTQQASTLAhlgsTLAPPASLASTLEPPASTPAPLASTLAPPASTPAPLACTPAPPASTLASPAVPQGLPIPDPSS 476
Cdd:PRK12323 371 GAGPATAAAAPVA----QPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGG 446

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881 477 CAQPKSLGPKSRRSRAPRPEAAEQVPAAGQGPGPQLRGVLGQVVAARLFPDSLEDTPPHFEGPPPPKAGSPKVQAtqpQT 556
Cdd:PRK12323 447 APAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGW---VA 523

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 768006881 557 KVTPPPSESQCRAKAESLKAKALPPAAGSVIRKSEATPSPGACLQPEVPLSPA 609
Cdd:PRK12323 524 ESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLPDM 576
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 387-522 2.65e-05

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 47.79  E-value: 2.65e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881 387 APQSGPWVSLGAVPPTQQASTLAHLGSTLAPPASLASTLEPPASTPAPLASTlAPPASTPAPLACTPAPPAstlasPAVP 466
Cdd:PRK14951 384 PEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPA-AAPAAAPAAVALAPAPPA-----QAAP 457

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 768006881 467 QGLPIPDPsscAQPKSLGPKSRRSRAPRPEAAEQVPAAgqgPGPQLRGVLGQVVAA 522
Cdd:PRK14951 458 ETVAIPVR---VAPEPAVASAAPAPAAAPAAARLTPTE---EGDVWHATVQQLAAA 507
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 426-520 4.87e-05

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 47.19  E-value: 4.87e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881  426 EPPASTPAPLASTLAPPASTPAPLACTPAPPASTLASPAVPQGLPIPDPSSCAQPKSlgpksrrSRAPRPEAAEQVPAAG 505
Cdd:PRK12270   40 STAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAP-------AAPPAAAAAAAPAAAA 112

                          90
                  ....*....|....*.
gi 768006881  506 QGPGPQ-LRGVLGQVV 520
Cdd:PRK12270  113 VEDEVTpLRGAAAAVA 128
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
326-523 7.50e-05

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 46.41  E-value: 7.50e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881 326 QTSPAPVETLSSLGTQPNHVPLWSSVAQPGPPEAFYVERPPFPSVSSPHIfwapsshgffwAPQSGPWVSLGAVPPTQQA 405
Cdd:PRK12323 371 GAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVA-----------AAPARRSPAPEALAAARQA 439

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881 406 STLAHLGSTLAPPAslastlepPASTPAPLASTLAPPASTPAPLACTPAPPASTLASPA-----------VPQGLPIPDP 474
Cdd:PRK12323 440 SARGPGGAPAPAPA--------PAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPApadddpppweeLPPEFASPAP 511

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 768006881 475 ----SSCAQPKSLGPKSRRSRAPRPEAAEQVPAAGQGPGPQLRGVLGQVVAAR 523
Cdd:PRK12323 512 aqpdAAPAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPR 564
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 387-522 1.81e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 44.98  E-value: 1.81e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881 387 APQSGPWVSLGAVPPTQQASTLAHLGSTLAPPASLAstlePPASTPAPLASTLAPPASTPAPlacTPAPPASTLASPAVP 466
Cdd:PRK07764 380 RLERRLGVAGGAGAPAAAAPSAAAAAPAAAPAPAAA----APAAAAAPAPAAAPQPAPAPAP---APAPPSPAGNAPAGG 452

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881 467 QGLPIPDPSSCAQPK---------SLGPKSRRSRAPRPEAAEQVPAA-----GQGPGPQLRGVLGQVVAA 522
Cdd:PRK07764 453 APSPPPAAAPSAQPApapaaapepTAAPAPAPPAAPAPAAAPAAPAApaapaGADDAATLRERWPEILAA 522
PRK14971 PRK14971
DNA polymerase III subunit gamma/tau;
396-501 1.92e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237874 [Multi-domain]  Cd Length: 614  Bit Score: 44.77  E-value: 1.92e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881 396 LGAVPPTQQASTLAHLGStlapPASLASTLEPPASTPAPLASTLAPPASTPAPLAcTPAPPASTLASPAVPQGLPIPDPS 475
Cdd:PRK14971 384 TQPAAAPQPSAAAAASPS----PSQSSAAAQPSAPQSATQPAGTPPTVSVDPPAA-VPVNPPSTAPQAVRPAQFKEEKKI 458

                         90       100
                 ....*....|....*....|....*.
gi 768006881 476 SCAQPKSLGPKSRRsraPRPEAAEQV 501
Cdd:PRK14971 459 PVSKVSSLGPSTLR---PIQEKAEQA 481
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
378-511 2.77e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 44.46  E-value: 2.77e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881 378 APSSHGFFWAPQSGPWVSLGAVPPTQQASTLAHLGSTLAPPASLA-----STLEPPASTPAPLASTLAPPASTPAPLACT 452
Cdd:PRK07003 387 AAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAppataDRGDDAADGDAPVPAKANARASADSRCDER 466

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 768006881 453 PAPPASTLASPAVPQGLPIPDPSSCAQPKSLGPKSRRSRAPRPEAAEQVPAAGQGPGPQ 511
Cdd:PRK07003 467 DAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPAAA 525
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 397-586 3.12e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 44.21  E-value: 3.12e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881 397 GAVPPTQQASTLAHLGSTLAPPASLASTLEPPASTPAPLASTLAPPASTPAPLACTPAPPASTLASPAV-----PQGLPI 471
Cdd:PRK07764 594 AAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDAsdggdGWPAKA 673

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881 472 PDPSSCAQPKSLGPKSRRSRAPRPEAAEQ-----VPAAGQGPGPQLRGVLGQVVAARLFPDSLEDTPPHFEGPPPPKAGS 546
Cdd:PRK07764 674 GGAAPAAPPPAPAPAAPAAPAGAAPAQPApapaaTPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAG 753

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 768006881 547 PKVQATQPQTKVTPPPSESQCRAKAESLKAKALPPAAGSV 586
Cdd:PRK07764 754 APAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDDAPSM 793
PHA03247 PHA03247
large tegument protein UL36; Provisional
 354-626 5.67e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 43.77  E-value: 5.67e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881  354 PGPPEAFYVERPPFPSVSSPHIFwAPSSHGFFWAPQSGPWV----------SLGAVPPTQQASTLAHLGSTLAPPASLAS 423
Cdd:PHA03247 2498 PGGGGPPDPDAPPAPSRLAPAIL-PDEPVGEPVHPRMLTWIrgleelasddAGDPPPPLPPAAPPAAPDRSVPPPRPAPR 2576

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881  424 TLEPPASTPAPLASTLAPPASTPAPLACTPAPPASTLASPAVPQGLPIPDPSSCAQPK-SLGPKSRRSRAPRPEAAEQVP 502
Cdd:PHA03247 2577 PSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAaNEPDPHPPPTVPPPERPRDDP 2656

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881  503 AAGQGPGPQLRGVLGQVVAA---------RLFPDSLEDTPPHFEGPPPPKAGSPKVQATQPQTKVTPPPSESQCRAKAES 573
Cdd:PHA03247 2657 APGRVSRPRRARRLGRAAQAssppqrprrRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALP 2736

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 768006881  574 LKAKALPPAAGSVIRKSEATP-SPGACLQPEVPLSPAEQATTVKASPPAFQVGS 626
Cdd:PHA03247 2737 AAPAPPAVPAGPATPGGPARPaRPPTTAGPPAPAPPAAPAAGPPRRLTRPAVAS 2790
PRK11855 PRK11855
dihydrolipoamide acetyltransferase; Reviewed
 412-512 1.51e-03

dihydrolipoamide acetyltransferase; Reviewed


Pssm-ID: 237000 [Multi-domain]  Cd Length: 547  Bit Score: 42.12  E-value: 1.51e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881 412 GSTLAPPASLASTLEPPASTPAPLASTLAPPASTPAPLACTPAPPASTLASPAVPQ-----GLPIpdpsscAQPKSLGPK 486
Cdd:PRK11855 196 AAAPAAAAAPAAAAPAAAAAAAPAPAPAAAAAPAAAAPAAAAAPGKAPHASPAVRRlarelGVDL------SQVKGTGKK 269

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 768006881 487 SR----------RSRAPRPEAAEQVPAAGQGPGPQL 512
Cdd:PRK11855 270 GRitkedvqafvKGAMSAAAAAAAAAAAAGGGGLGL 305
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
428-621 1.80e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 41.76  E-value: 1.80e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881 428 PASTPAPLASTLAPPASTPAPLACTPAPPASTLASPAVPQGLPIPDPSSCAQPKSLGPKSRRSRAPRPEAAEQVPAAGQG 507
Cdd:PRK07003 360 PAVTGGGAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRG 439

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881 508 PGPQLRGVLGQVVAARLFPDSLEDTPPHFEGPPPPKAGSPKVQATQPQTKVTPPPSESQCRAKAESLKAKALPPAAGSvi 587
Cdd:PRK07003 440 DDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAAS-- 517

                        170       180       190
                 ....*....|....*....|....*....|....
gi 768006881 588 RKSEATPspgaclqPEVPLSPAEQATTVKASPPA 621
Cdd:PRK07003 518 REDAPAA-------AAPPAPEARPPTPAAAAPAA 544
PHA03378 PHA03378
EBNA-3B; Provisional
 356-596 2.06e-03

EBNA-3B; Provisional


Pssm-ID: 223065 [Multi-domain]  Cd Length: 991  Bit Score: 41.59  E-value: 2.06e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881 356 PPEAFYVERPPfPSVSSPHIFWAPSSHGFFWAPQSGPwvslGAVPPTQQASTLAHlgstlaPPASLASTLEPPASTP--- 432
Cdd:PHA03378 706 PPAAPPGRAQR-PAAATGRARPPAAAPGRARPPAAAP----GRARPPAAAPGRAR------PPAAAPGRARPPAAAPgap 774

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881 433 APLASTLAPPA------STPAPLACTPAPPASTLASPAVPQGLPIPDPSSCAQPKSLGPKSRRSRAPRPEAAEQVPAAGQ 506
Cdd:PHA03378 775 TPQPPPQAPPApqqrprGAPTPQPPPQAGPTSMQLMPRAAPGQQGPTKQILRQLLTGGVKRGRPSLKKPAALERQAAAGP 854

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881 507 GPGPQLRGVLGQVVAARLFPDSLEdtpphfEGPPPPKAGSPKVQATQPQTKVtpPPSESQCRAKAESLKAKALPPAAGSv 586
Cdd:PHA03378 855 TPSPGSGTSDKIVQAPVFYPPVLQ------PIQVMRQLGSVRAAAASTVTQA--PTEYTGERRGVGPMHPTDIPPSKRA- 925

                        250
                 ....*....|
gi 768006881 587 irKSEATPSP 596
Cdd:PHA03378 926 --KTDAYVES 933
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
392-624 2.29e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 41.37  E-value: 2.29e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881 392 PWVSLGAVPPTQQASTLAhlGSTLAPPASLASTLEPPASTPAPLAStlAPPASTPAPLACTPAPPASTLASPAVPQGLPI 471
Cdd:PRK07003 360 PAVTGGGAPGGGVPARVA--GAVPAPGARAAAAVGASAVPAVTAVT--GAAGAALAPKAAAAAAATRAEAPPAAPAPPAT 435

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881 472 PDP--SSCAQPKSLGPKSRRSRAPRPEAAEQVPAAGQGPGPQLRGVLGQVVAARLFPDSLEDTPPHFEGPPPPKAGSPkv 549
Cdd:PRK07003 436 ADRgdDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAP-- 513

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881 550 qATQPQTKVTPPPSESQCRAKAESLKAKALPPAAG------SVIR------KSEATPSPGACLQPEVPLSPAEQATtvkA 617
Cdd:PRK07003 514 -AAASREDAPAAAAPPAPEARPPTPAAAAPAARAGgaaaalDVLRnagmrvSSDRGARAAAAAKPAAAPAAAPKPA---A 589


                 ....*..
gi 768006881 618 SPPAFQV 624
Cdd:PRK07003 590 PRVAVQV 596
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 414-511 4.05e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 40.56  E-value: 4.05e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881 414 TLAPPASLASTLEPPASTPAPLASTLAPpASTPAPLACTPAPPASTLASPAVPQGLPI-PDPSSCAQPKSLGPKSRRSRA 492
Cdd:PRK14950 358 ALLVPVPAPQPAKPTAAAPSPVRPTPAP-STRPKAAAAANIPPKEPVRETATPPPVPPrPVAPPVPHTPESAPKLTRAAI 436

                         90
                 ....*....|....*....
gi 768006881 493 PRPEAAEqvpaaGQGPGPQ 511
Cdd:PRK14950 437 PVDEKPK-----YTPPAPP 450
PRK14965 PRK14965
DNA polymerase III subunits gamma and tau; Provisional
 412-505 6.77e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237871 [Multi-domain]  Cd Length: 576  Bit Score: 39.72  E-value: 6.77e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881 412 GSTLAPPASLASTLE--------------PPASTPAPLASTLAPPASTPAPLACTPAPPASTLASPAVPQGLPIPDPSSC 477
Cdd:PRK14965 358 MATLAPGAPVSELLDrlealergapappsAAWGAPTPAAPAAPPPAAAPPVPPAAPARPAAARPAPAPAPPAAAAPPARS 437

                         90       100
                 ....*....|....*....|....*...
gi 768006881 478 AQPKSLGPKSRRSRAPRPEAAEQVPAAG 505
Cdd:PRK14965 438 ADPAAAASAGDRWRAFVAFVKGKKPALG 465
PRK07994 PRK07994
DNA polymerase III subunits gamma and tau; Validated
 417-504 7.92e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236138 [Multi-domain]  Cd Length: 647  Bit Score: 39.85  E-value: 7.92e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881 417 PPASLASTLEPPAST-PAPLASTLAPPASTPAPLACTPAPPASTLASPAVPQGLPIPDPSSCAQPKS-LGPKSRRSRAPR 494
Cdd:PRK07994 361 PAAPLPEPEVPPQSAaPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQqLQRAQGATKAKK 440

                         90
                 ....*....|
gi 768006881 495 PEAAEQVPAA 504
Cdd:PRK07994 441 SEPAAASRAR 450
PTZ00436 PTZ00436
60S ribosomal protein L19-like protein; Provisional
 405-505 8.47e-03

60S ribosomal protein L19-like protein; Provisional


Pssm-ID: 185616 [Multi-domain]  Cd Length: 357  Bit Score: 39.16  E-value: 8.47e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881 405 ASTLAHLGSTLAPPASLAStlePPASTPAPLASTLAPPASTPAPLACTPAPPASTLASPAvpQGLPIPDPSSCAQPKSLG 484
Cdd:PTZ00436 230 AKAAAPPAKAAAAPAKAAA---APAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAPPA--KAAAPPAKAAAAPAKAAA 304

                         90       100
                 ....*....|....*....|.
gi 768006881 485 PKSRRSRAPRPEAAEQVPAAG 505
Cdd:PTZ00436 305 APAKAAAAPAKAAAPPAKAAA 325
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 338-510 8.58e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 39.58  E-value: 8.58e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881 338 LGTQPNHVPLWSSVAQPGPPEAFYVERPPFPSVSSPHIFWAPSSHGFFWAPQSGPWVSLGAVPPTQQASTLAHLGSTLAP 417
Cdd:PRK07764 588 VGPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGD 667

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881 418 PASLASTLEPPASTPAPLASTLAPPASTPAPLACTPAPPASTLASPAVPqglPIPDPSSCAQPKSLGPKSRRSRAPRPEA 497
Cdd:PRK07764 668 GWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADD---PAAQPPQAAQGASAPSPAADDPVPLPPE 744

                        170
                 ....*....|...
gi 768006881 498 AEQVPAAGQGPGP 510
Cdd:PRK07764 745 PDDPPDPAGAPAQ 757
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 379-473 8.64e-03

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 39.87  E-value: 8.64e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006881  379 PSSHGFFWAPQSGPwvslgaVPPTQQASTLAHLGSTLAPPASLASTLEPPASTPAPLASTLAPPASTPAPLACTPAPPAS 458
Cdd:PRK12270   27 PSWREFFADYGPGS------TAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPP 100

                          90
                  ....*....|....*
gi 768006881  459 TLASPAVPQGLPIPD 473
Cdd:PRK12270  101 AAAAAAAPAAAAVED 115
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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