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Conserved domains on  [gi|767908187|ref|XP_011507401|]
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myotubularin-related protein 11 isoform X3 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PTP_DSP_cys super family cl28904
cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily; This ...
254-374 5.62e-70

cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily; This superfamily is composed of cys-based phosphatases, which includes classical protein tyrosine phosphatases (PTPs) as well as dual-specificity phosphatases (DUSPs or DSPs). They are characterized by a CxxxxxR conserved catalytic loop (where C is the catalytic cysteine, x is any amino acid, and R is an arginine). PTPs are part of the tyrosine phosphorylation/dephosphorylation regulatory mechanism, and are important in the response of the cells to physiologic and pathologic changes in their environment. DUSPs show more substrate diversity (including RNA and lipids) and include pTyr, pSer, and pThr phosphatases.


The actual alignment was detected with superfamily member cd14595:

Pssm-ID: 475123  Cd Length: 195  Bit Score: 218.93  E-value: 5.62e-70
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767908187 254 GRGPRLSWHHPGGSDLLRCGGFYTASDPNKEDIRAVELMLQAGHSDVVLVDTMDELPSLADVQLAHLRLRALCLPDSSVA 333
Cdd:cd14595    1 GRIPRWCWHHPGGSDLLRMAGFYTNSDPEKEDIRSVELLLQAGHSQCVIVDTSEELPSPADIQLAYLKLRTLCLPDISVS 80
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 767908187 334 ED--KWLSALEGTRWLDYVRACLRKASDISVLVTSRVRSVILQ 374
Cdd:cd14595   81 VSdeKWLSNLEGTRWLDHVRACLRKASEVSCLLAERHRSVILQ 123
PH-GRAM_MTMR11 cd15790
Myotubularian (MTM) related 11 protein (MTMR11) Pleckstrin Homology-Glucosyltransferases, ...
46-160 4.84e-64

Myotubularian (MTM) related 11 protein (MTMR11) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain; MTMR10, MTMR11, and MTMR12 are catalytically inactive phosphatases that play a role as an adapter for the phosphatase myotubularin to regulate myotubularintracellular location. They contains a Glu residue instead of a conserved Cys residue in the dsPTPase catalytic loop which renders it catalytically inactive as a phosphatase. They contains an N-terminal PH-GRAM domain, a Rac-induced recruitment domain (RID) domain, an inactive PTP domain, a SET interaction domain, and a C-terminal coiled-coil domain. Myotubularin-related proteins are a subfamily of protein tyrosine phosphatases (PTPs) that dephosphorylate D3-phosphorylated inositol lipids. Mutations in this family cause the human neuromuscular disorders myotubular myopathy and type 4B Charcot-Marie-Tooth syndrome. 6 of the 13 MTMRs (MTMRs 5, 9-13) contain naturally occurring substitutions of residues required for catalysis by PTP family enzymes. Although these proteins are predicted to be enzymatically inactive, they are thought to function as antagonists of endogenous phosphatase activity or interaction modules. Most MTMRs contain a N-terminal PH-GRAM domain, a Rac-induced recruitment domain (RID) domain, a PTP domain (which may be active or inactive), a SET-interaction domain, and a C-terminal coiled-coil region. In addition some members contain DENN domain N-terminal to the PH-GRAM domain and FYVE, PDZ, and PH domains C-terminal to the coiled-coil region. The GRAM domain, found in myotubularins, glucosyltransferases, and other putative membrane-associated proteins, is part of a larger motif with a pleckstrin homology (PH) domain fold.


:

Pssm-ID: 275433  Cd Length: 123  Bit Score: 201.16  E-value: 4.84e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767908187  46 LPGEQILAWAPGVRKGL-----EPELSGTLICTNFRVTFQPCGWQWN---QDTPLNSEYDFALVNIGRLEAVSGLSRVQL 117
Cdd:cd15790    1 LPGEHILEEAVRVRKLVqwrdgEGFLSGTLYCTNFRVAFVPEHIQKDendHDTVLNSEHDIALPSIDRVVAVQGPTTMKA 80
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 767908187 118 LRPGSLHKFIPEEILIHGRDFRLLRVGFEAGGLEPQAFQVTMA 160
Cdd:cd15790   81 VTASSGLKFIPEELVIYCRDFRLLRFQFEQSTLEPQAFQITTA 123
 
Name Accession Description Interval E-value
PTP-MTMR11 cd14595
protein tyrosine phosphatase-like pseudophosphatase domain of myotubularin related ...
254-374 5.62e-70

protein tyrosine phosphatase-like pseudophosphatase domain of myotubularin related phosphoinositide phosphatase 11; Myotubularin related phosphoinositide phosphatase 11 (MTMR11), also called cisplatin resistance-associated protein (hCRA) in humans, is enzymatically inactive and contains a C-terminal coiled-coil domain and an N-terminal PH-GRAM domain. In general, myotubularins are a unique subgroup of protein tyrosine phosphatases that use inositol phospholipids, rather than phosphoproteins, as substrates. MTMR11 is a pseudophosphatase that lacks the catalytic cysteine in its catalytic pocket.


Pssm-ID: 350443  Cd Length: 195  Bit Score: 218.93  E-value: 5.62e-70
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767908187 254 GRGPRLSWHHPGGSDLLRCGGFYTASDPNKEDIRAVELMLQAGHSDVVLVDTMDELPSLADVQLAHLRLRALCLPDSSVA 333
Cdd:cd14595    1 GRIPRWCWHHPGGSDLLRMAGFYTNSDPEKEDIRSVELLLQAGHSQCVIVDTSEELPSPADIQLAYLKLRTLCLPDISVS 80
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 767908187 334 ED--KWLSALEGTRWLDYVRACLRKASDISVLVTSRVRSVILQ 374
Cdd:cd14595   81 VSdeKWLSNLEGTRWLDHVRACLRKASEVSCLLAERHRSVILQ 123
PH-GRAM_MTMR11 cd15790
Myotubularian (MTM) related 11 protein (MTMR11) Pleckstrin Homology-Glucosyltransferases, ...
46-160 4.84e-64

Myotubularian (MTM) related 11 protein (MTMR11) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain; MTMR10, MTMR11, and MTMR12 are catalytically inactive phosphatases that play a role as an adapter for the phosphatase myotubularin to regulate myotubularintracellular location. They contains a Glu residue instead of a conserved Cys residue in the dsPTPase catalytic loop which renders it catalytically inactive as a phosphatase. They contains an N-terminal PH-GRAM domain, a Rac-induced recruitment domain (RID) domain, an inactive PTP domain, a SET interaction domain, and a C-terminal coiled-coil domain. Myotubularin-related proteins are a subfamily of protein tyrosine phosphatases (PTPs) that dephosphorylate D3-phosphorylated inositol lipids. Mutations in this family cause the human neuromuscular disorders myotubular myopathy and type 4B Charcot-Marie-Tooth syndrome. 6 of the 13 MTMRs (MTMRs 5, 9-13) contain naturally occurring substitutions of residues required for catalysis by PTP family enzymes. Although these proteins are predicted to be enzymatically inactive, they are thought to function as antagonists of endogenous phosphatase activity or interaction modules. Most MTMRs contain a N-terminal PH-GRAM domain, a Rac-induced recruitment domain (RID) domain, a PTP domain (which may be active or inactive), a SET-interaction domain, and a C-terminal coiled-coil region. In addition some members contain DENN domain N-terminal to the PH-GRAM domain and FYVE, PDZ, and PH domains C-terminal to the coiled-coil region. The GRAM domain, found in myotubularins, glucosyltransferases, and other putative membrane-associated proteins, is part of a larger motif with a pleckstrin homology (PH) domain fold.


Pssm-ID: 275433  Cd Length: 123  Bit Score: 201.16  E-value: 4.84e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767908187  46 LPGEQILAWAPGVRKGL-----EPELSGTLICTNFRVTFQPCGWQWN---QDTPLNSEYDFALVNIGRLEAVSGLSRVQL 117
Cdd:cd15790    1 LPGEHILEEAVRVRKLVqwrdgEGFLSGTLYCTNFRVAFVPEHIQKDendHDTVLNSEHDIALPSIDRVVAVQGPTTMKA 80
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 767908187 118 LRPGSLHKFIPEEILIHGRDFRLLRVGFEAGGLEPQAFQVTMA 160
Cdd:cd15790   81 VTASSGLKFIPEELVIYCRDFRLLRFQFEQSTLEPQAFQITTA 123
Myotub-related pfam06602
Myotubularin-like phosphatase domain; This family represents the phosphatase domain within ...
201-364 4.53e-15

Myotubularin-like phosphatase domain; This family represents the phosphatase domain within eukaryotic myotubularin-related proteins. Myotubularin is a dual-specific lipid phosphatase that dephosphorylates phosphatidylinositol 3-phosphate and phosphatidylinositol (3,5)-bi-phosphate. Mutations in gene encoding myotubularin-related proteins have been associated with disease.


Pssm-ID: 461958 [Multi-domain]  Cd Length: 332  Bit Score: 75.59  E-value: 4.53e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767908187  201 DWETERKKQ---AARGWRVSTVNERFDVATSLPRYFWVPNRILDSEVRRAFGHFHQGRGPRLSWHHPG-GSDLLRCG--- 273
Cdd:pfam06602   9 DPEAEFARQglpSKDEWRISDINKDYKVCPTYPALLVVPKSISDETLKKAAKFRSKGRIPVLSYRHKEnGAVITRSSqpl 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767908187  274 -GFytASDPNKEDiravELMLQA--------GHSDVVLVDTMDELPSLA---------------DVQLAHL--------- 320
Cdd:pfam06602  89 vGL--NGKRSIED----EKLLQAifkssnpySAKKLYIVDARPKLNAMAnrakgggyenednypNCKKIFLgienihvmr 162
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 767908187  321 ----RLRALCLpDSSVAEDKWLSALEGTRWLDYVRACLRKASDI---------SVLV 364
Cdd:pfam06602 163 dslnKLVEACN-DRSPSMDKWLSRLESSGWLKHIKAILDGACLIaqavdlegsSVLV 218
 
Name Accession Description Interval E-value
PTP-MTMR11 cd14595
protein tyrosine phosphatase-like pseudophosphatase domain of myotubularin related ...
254-374 5.62e-70

protein tyrosine phosphatase-like pseudophosphatase domain of myotubularin related phosphoinositide phosphatase 11; Myotubularin related phosphoinositide phosphatase 11 (MTMR11), also called cisplatin resistance-associated protein (hCRA) in humans, is enzymatically inactive and contains a C-terminal coiled-coil domain and an N-terminal PH-GRAM domain. In general, myotubularins are a unique subgroup of protein tyrosine phosphatases that use inositol phospholipids, rather than phosphoproteins, as substrates. MTMR11 is a pseudophosphatase that lacks the catalytic cysteine in its catalytic pocket.


Pssm-ID: 350443  Cd Length: 195  Bit Score: 218.93  E-value: 5.62e-70
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767908187 254 GRGPRLSWHHPGGSDLLRCGGFYTASDPNKEDIRAVELMLQAGHSDVVLVDTMDELPSLADVQLAHLRLRALCLPDSSVA 333
Cdd:cd14595    1 GRIPRWCWHHPGGSDLLRMAGFYTNSDPEKEDIRSVELLLQAGHSQCVIVDTSEELPSPADIQLAYLKLRTLCLPDISVS 80
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 767908187 334 ED--KWLSALEGTRWLDYVRACLRKASDISVLVTSRVRSVILQ 374
Cdd:cd14595   81 VSdeKWLSNLEGTRWLDHVRACLRKASEVSCLLAERHRSVILQ 123
PH-GRAM_MTMR11 cd15790
Myotubularian (MTM) related 11 protein (MTMR11) Pleckstrin Homology-Glucosyltransferases, ...
46-160 4.84e-64

Myotubularian (MTM) related 11 protein (MTMR11) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain; MTMR10, MTMR11, and MTMR12 are catalytically inactive phosphatases that play a role as an adapter for the phosphatase myotubularin to regulate myotubularintracellular location. They contains a Glu residue instead of a conserved Cys residue in the dsPTPase catalytic loop which renders it catalytically inactive as a phosphatase. They contains an N-terminal PH-GRAM domain, a Rac-induced recruitment domain (RID) domain, an inactive PTP domain, a SET interaction domain, and a C-terminal coiled-coil domain. Myotubularin-related proteins are a subfamily of protein tyrosine phosphatases (PTPs) that dephosphorylate D3-phosphorylated inositol lipids. Mutations in this family cause the human neuromuscular disorders myotubular myopathy and type 4B Charcot-Marie-Tooth syndrome. 6 of the 13 MTMRs (MTMRs 5, 9-13) contain naturally occurring substitutions of residues required for catalysis by PTP family enzymes. Although these proteins are predicted to be enzymatically inactive, they are thought to function as antagonists of endogenous phosphatase activity or interaction modules. Most MTMRs contain a N-terminal PH-GRAM domain, a Rac-induced recruitment domain (RID) domain, a PTP domain (which may be active or inactive), a SET-interaction domain, and a C-terminal coiled-coil region. In addition some members contain DENN domain N-terminal to the PH-GRAM domain and FYVE, PDZ, and PH domains C-terminal to the coiled-coil region. The GRAM domain, found in myotubularins, glucosyltransferases, and other putative membrane-associated proteins, is part of a larger motif with a pleckstrin homology (PH) domain fold.


Pssm-ID: 275433  Cd Length: 123  Bit Score: 201.16  E-value: 4.84e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767908187  46 LPGEQILAWAPGVRKGL-----EPELSGTLICTNFRVTFQPCGWQWN---QDTPLNSEYDFALVNIGRLEAVSGLSRVQL 117
Cdd:cd15790    1 LPGEHILEEAVRVRKLVqwrdgEGFLSGTLYCTNFRVAFVPEHIQKDendHDTVLNSEHDIALPSIDRVVAVQGPTTMKA 80
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 767908187 118 LRPGSLHKFIPEEILIHGRDFRLLRVGFEAGGLEPQAFQVTMA 160
Cdd:cd15790   81 VTASSGLKFIPEELVIYCRDFRLLRFQFEQSTLEPQAFQITTA 123
PH-GRAM_MTMR10-like cd13212
Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins ...
46-160 1.27e-62

Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain; MTMR10, MTMR11, and MTMR12 are catalytically inactive phosphatases that play a role as an adapter for the phosphatase myotubularin to regulate myotubularintracellular location. They contains a Glu residue instead of a conserved Cys residue in the dsPTPase catalytic loop which renders it catalytically inactive as a phosphatase. They contains an N-terminal PH-GRAM domain, a Rac-induced recruitment domain (RID) domain, an inactive PTP domain, a SET interaction domain, and a C-terminal coiled-coil domain. Myotubularin-related proteins are a subfamily of protein tyrosine phosphatases (PTPs) that dephosphorylate D3-phosphorylated inositol lipids. Mutations in this family cause the human neuromuscular disorders myotubular myopathy and type 4B Charcot-Marie-Tooth syndrome. 6 of the 13 MTMRs (MTMRs 5, 9-13) contain naturally occurring substitutions of residues required for catalysis by PTP family enzymes. Although these proteins are predicted to be enzymatically inactive, they are thought to function as antagonists of endogenous phosphatase activity or interaction modules. Most MTMRs contain a N-terminal PH-GRAM domain, a Rac-induced recruitment domain (RID) domain, a PTP domain (which may be active or inactive), a SET-interaction domain, and a C-terminal coiled-coil region. In addition some members contain DENN domain N-terminal to the PH-GRAM domain and FYVE, PDZ, and PH domains C-terminal to the coiled-coil region. The GRAM domain, found in myotubularins, glucosyltransferases, and other putative membrane-associated proteins, is part of a larger motif with a pleckstrin homology (PH) domain fold.


Pssm-ID: 275399  Cd Length: 125  Bit Score: 197.45  E-value: 1.27e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767908187  46 LPGEQILAWAPGVRKGL-----EPELSGTLICTNFRVTFQPCGWQWNQ----DTPLNSEYDFALVNIGRLEAVSGLSRVQ 116
Cdd:cd13212    1 LPGEQVLAEAPGVRKGLqedssQPELSGTLICTNFKITFQPDDWQWLDntqqKNPLNGEYDFALVCIGQIEAVSDLKRVQ 80
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 767908187 117 LLRPGSLHKFIPEEILIHGRDFRLLRVGFEA-GGLEPQAFQVTMA 160
Cdd:cd13212   81 LLRPGSLLKFIPEELIIHCKDFRVLRFGFEAtGGEEPKAFQVTIA 125
PTP-MTMR10-like cd14537
protein tyrosine phosphatase-like pseudophosphatase domain of myotubularin related ...
254-374 1.36e-39

protein tyrosine phosphatase-like pseudophosphatase domain of myotubularin related phosphoinositide phosphatases 10, 11, and 12; This subgroup of enzymatically inactive phosphatase domains of myotubularins consists of MTMR10, MTMR11, MTMR12, and similar proteins. Beside the phosphatase domain, they contain an N-terminal PH-GRAM domain. In general, myotubularins are a unique subgroup of protein tyrosine phosphatases that use inositol phospholipids, rather than phosphoproteins, as substrates. MTMR10, MTMR11, and MTMR12 are pseudophosphatases that lack the catalytic cysteine in their catalytic pocket. MTMR12 functions as an adapter for the catalytically active myotubularin to regulate its intracellular location.


Pssm-ID: 350385  Cd Length: 200  Bit Score: 140.17  E-value: 1.36e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767908187 254 GRGPRLSWHHPGGSDLLRCGGFYtasdpNKEDIRAVELMLQ-------AGHSDVVLVDTMDELPSLADVQLAHLRLRALC 326
Cdd:cd14537    1 GRPPVWCWSHPNGAALVRMAELL-----PTITDRTQENKMLeairkshPNLKKPKVIDLDKLLPSLQDVQAAYLKLRELC 75
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 767908187 327 LPDSSVAED----KWLSALEGTRWLDYVRACLRKASDISVLVTSRVRSVILQ 374
Cdd:cd14537   76 TPDSSEQFWvqdsKWYSLLENTKWLHYVSACLKKASEAAEALESRGRSVVLQ 127
PTP-MTMR10 cd14593
protein tyrosine phosphatase-like pseudophosphatase domain of myotubularin related ...
254-374 4.67e-21

protein tyrosine phosphatase-like pseudophosphatase domain of myotubularin related phosphoinositide phosphatase 10; Myotubularin related phosphoinositide phosphatase 10 (MTMR10) is enzymatically inactive and contains an N-terminal PH-GRAM domain. In general, myotubularins are a unique subgroup of protein tyrosine phosphatases that use inositol phospholipids, rather than phosphoproteins, as substrates. MTMR10 is a pseudophosphatase that lacks the catalytic cysteine in its catalytic pocket.


Pssm-ID: 350441  Cd Length: 195  Bit Score: 90.34  E-value: 4.67e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767908187 254 GRGPRLSWHHPGGSDLLRCGGFYTASDPNKEDIRAVELMLQAG--HSDVVLVDTMDELPSLADVQLAHLRLRALCLPDS- 330
Cdd:cd14593    1 RRIPLWCWNHPNGSALVRMANIKDLLQQRKIDQRICNAITRSHplRSDVYKSDLDKTLPNIQEIQAAFVKLKQLCVNEPf 80
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 767908187 331 SVAEDKWLSALEGTRWLDYVRACLRKASDISVLVTSRVRSVILQ 374
Cdd:cd14593   81 EETEEKWLSSLESTRWLEYVRAFLKHSAELVYMLESKHVSVILQ 124
Myotub-related pfam06602
Myotubularin-like phosphatase domain; This family represents the phosphatase domain within ...
201-364 4.53e-15

Myotubularin-like phosphatase domain; This family represents the phosphatase domain within eukaryotic myotubularin-related proteins. Myotubularin is a dual-specific lipid phosphatase that dephosphorylates phosphatidylinositol 3-phosphate and phosphatidylinositol (3,5)-bi-phosphate. Mutations in gene encoding myotubularin-related proteins have been associated with disease.


Pssm-ID: 461958 [Multi-domain]  Cd Length: 332  Bit Score: 75.59  E-value: 4.53e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767908187  201 DWETERKKQ---AARGWRVSTVNERFDVATSLPRYFWVPNRILDSEVRRAFGHFHQGRGPRLSWHHPG-GSDLLRCG--- 273
Cdd:pfam06602   9 DPEAEFARQglpSKDEWRISDINKDYKVCPTYPALLVVPKSISDETLKKAAKFRSKGRIPVLSYRHKEnGAVITRSSqpl 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767908187  274 -GFytASDPNKEDiravELMLQA--------GHSDVVLVDTMDELPSLA---------------DVQLAHL--------- 320
Cdd:pfam06602  89 vGL--NGKRSIED----EKLLQAifkssnpySAKKLYIVDARPKLNAMAnrakgggyenednypNCKKIFLgienihvmr 162
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 767908187  321 ----RLRALCLpDSSVAEDKWLSALEGTRWLDYVRACLRKASDI---------SVLV 364
Cdd:pfam06602 163 dslnKLVEACN-DRSPSMDKWLSRLESSGWLKHIKAILDGACLIaqavdlegsSVLV 218
PTP-MTMR12 cd14594
protein tyrosine phosphatase-like pseudophosphatase domain of myotubularin related ...
257-360 9.88e-12

protein tyrosine phosphatase-like pseudophosphatase domain of myotubularin related phosphoinositide phosphatase 12; Myotubularin related phosphoinositide phosphatase 12 (MTMR12), also called phosphatidylinositol 3 phosphate 3-phosphatase adapter subunit (3-PAP), is enzymatically inactive and contains a C-terminal coiled-coil domain and an N-terminal PH-GRAM domain. In general, myotubularins are a unique subgroup of protein tyrosine phosphatases that use inositol phospholipids, rather than phosphoproteins, as substrates. MTMR12 is a pseudophosphatase that lacks the catalytic cysteine in its catalytic pocket. It functions as an adapter for the catalytically active myotubularin to regulate its intracellular location.


Pssm-ID: 350442  Cd Length: 203  Bit Score: 63.71  E-value: 9.88e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767908187 257 PRLSWHHPGGSDLLRCGGF-----YTASDPNKEDIRAVELMLQAGHSDVVLVDTMDE-LPSLADVQLAHLRLRALCLPDS 330
Cdd:cd14594    4 PIWCWSCHNGCALLKMSALpkeqdDVALQDQKSFLDRIYKTLSRPPYESVKTEDLSAsLPSLQEIQTAYNRFKQLFLIDN 83
                         90       100       110
                 ....*....|....*....|....*....|....
gi 767908187 331 SV----AEDKWLSALEGTRWLDYVRACLRKASDI 360
Cdd:cd14594   84 STdfwdTDVKWFSSLESSNWLEIIRQCLKKAVEV 117
PH-GRAM_MTMR10 cd13346
Myotubularian (MTM) related 10 protein (MTMR10) Pleckstrin Homology-Glucosyltransferases, ...
25-161 1.07e-11

Myotubularian (MTM) related 10 protein (MTMR10) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain; MTMR10 is a catalytically inactive phosphatase that plays a role as an adapter for the phosphatase myotubularin to regulate myotubularintracellular location. It contains a Glu residue instead of a conserved Cys residue in the dsPTPase catalytic loop which renders it catalytically inactive as a phosphatase. MTMR10 contains an N-terminal PH-GRAM domain, a Rac-induced recruitment domain (RID) domain, an inactive PTP domain, and a SET interaction domain. Myotubularin-related proteins are a subfamily of protein tyrosine phosphatases (PTPs) that dephosphorylate D3-phosphorylated inositol lipids. Mutations in this family cause the human neuromuscular disorders myotubular myopathy and type 4B Charcot-Marie-Tooth syndrome. 6 of the 13 MTMRs (MTMRs 5, 9-13) contain naturally occurring substitutions of residues required for catalysis by PTP family enzymes. Although these proteins are predicted to be enzymatically inactive, they are thought to function as antagonists of endogenous phosphatase activity or interaction modules. Most MTMRs contain a N-terminal PH-GRAM domain, a Rac-induced recruitment domain (RID) domain, a PTP domain (which may be active or inactive), a SET-interaction domain, and a C-terminal coiled-coil region. In addition some members contain DENN domain N-terminal to the PH-GRAM domain and FYVE, PDZ, and PH domains C-terminal to the coiled-coil region. The GRAM domain, found in myotubularins, glucosyltransferases, and other putative membrane-associated proteins, is part of a larger motif with a pleckstrin homology (PH) domain fold. The PH domain family possesses multiple functions including the ability to bind phosphoinositides via its beta1/beta2, beta3/beta4, and beta6/beta7 connecting loops and to other proteins. However, no phosphoinositide binding sites have been found for the MTMRs to date.


Pssm-ID: 270154  Cd Length: 177  Bit Score: 63.02  E-value: 1.07e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767908187  25 QENRMPEPRSRQpsscLASRCLPGEQILAWAPGVRKGL-----EPELSGTLICTNFRVTF---QPCGWQ-WNQDTPLNSE 95
Cdd:cd13346    2 DDKINSEPKIKK----LEPVLLPGEIVVNEVNFVRKCIatdtsQYDLWGKLICTNFKISFitdDPMPLQkFHYKNLLLGE 77
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 767908187  96 YDFALVNIGRLEAVSGLSRVQ-LLRPGSLHKFIPEEILIHGRDFRLLRVGFEAGGLEpQAFQVTMAI 161
Cdd:cd13346   78 HDVPLTCIEQIVTVNDTKRKQkVLGPNQKLKFNPTELIIYCKDFRIVRFRFDEAGPE-SAKKVCLAI 143
PTP-MTM-like cd14507
protein tyrosine phosphatase-like domain of myotubularins; Myotubularins are a unique subgroup ...
254-374 1.63e-07

protein tyrosine phosphatase-like domain of myotubularins; Myotubularins are a unique subgroup of protein tyrosine phosphatases that use inositol phospholipids, rather than phosphoproteins, as substrates. They dephosphorylate the D-3 position of phosphatidylinositol 3-phosphate [PI(3)P] and phosphatidylinositol 3,5-bisphosphate [PI(3,5)P2], generating phosphatidylinositol and phosphatidylinositol 5-phosphate [PI(5)P], respectively. Not all members are catalytically active proteins, some function as adaptors for the active members.


Pssm-ID: 350357  Cd Length: 226  Bit Score: 51.78  E-value: 1.63e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767908187 254 GRGPRLSWHHP-GGSDLLRCG----GFYTASdpNKEDIRAVELMLQAGHSDVVLVdTMDELPSLA--------------- 313
Cdd:cd14507    1 GRIPVLSWRHPrNGAVICRSSqplvGLTGSR--SKEDEKLLNAIRKASPSSKKLY-IVDARPKLNavanrakgggyente 77
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 767908187 314 ---DVQLAHL-------------RLRALCLPDSSVaEDKWLSALEGTRWLDYVRACLRKASDISVLVTSRVRSVILQ 374
Cdd:cd14507   78 yypNCELEFLnienihamrdslnKLRDACLSPNDE-ESNWLSALESSGWLEHIRLILKGAVRVADLLEKEGTSVLVH 153
PTP-MTM1-like cd14535
protein tyrosine phosphatase-like domain of myotubularin, and myotubularin related ...
254-373 8.58e-06

protein tyrosine phosphatase-like domain of myotubularin, and myotubularin related phosphoinositide phosphatases 1 and 2; This subgroup of enzymatically active phosphatase domains of myotubularins consists of MTM1, MTMR1 and MTMR2. All contain an additional N-terminal PH-GRAM domain and C-terminal coiled-coiled domain and PDZ binding site. In general, myotubularins are a unique subgroup of protein tyrosine phosphatases that use inositol phospholipids, rather than phosphoproteins, as substrates. They dephosphorylate the D-3 position of phosphatidylinositol 3-phosphate [PI(3)P] and phosphatidylinositol 3,5-bisphosphate [PI(3,5)P2], generating phosphatidylinositol and phosphatidylinositol 5-phosphate [PI(5)P], respectively.


Pssm-ID: 350383  Cd Length: 249  Bit Score: 46.67  E-value: 8.58e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767908187 254 GRGPRLSWHHP-GGSDLLRCggfytaSDP--------NKEDIRAVELMLQA-GHSDVVLVdtMDELPS------------ 311
Cdd:cd14535    1 NRIPVLSWIHPeSQATITRC------SQPlvgvsgkrSKDDEKYLQLIMDAnAQSHKLFI--MDARPSvnavankakggg 72
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767908187 312 -------------LADVQLAHL------RLRALCLPdsSVAEDKWLSALEGTRWLDYVRACLRKASDISVLVTSRVRSVI 372
Cdd:cd14535   73 yesedayqnaelvFLDIHNIHVmreslrKLKDICFP--NIDDSHWLSNLESTHWLEHIKLILAGAVRIADKVESGKTSVV 150

                 .
gi 767908187 373 L 373
Cdd:cd14535  151 V 151
PH-GRAM_MTMR12 cd13348
Myotubularian (MTM) related 12 protein (MTMR12) Pleckstrin Homology-Glucosyltransferases, ...
46-140 2.82e-05

Myotubularian (MTM) related 12 protein (MTMR12) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain; MTMR12 is a catalytically inactive phosphatase that plays a role as an adapter for the phosphatase myotubularin to regulate myotubularintracellular location. It contains a Glu residue instead of a conserved Cys residue in the dsPTPase catalytic loop which renders it catalytically inactive as a phosphatase. MTMR12 contains an N-terminal PH-GRAM domain, a Rac-induced recruitment domain (RID) domain, an inactive PTP domain, a SET interaction domain, and a C-terminal a coiled-coil domain. Myotubularin-related proteins are a subfamily of protein tyrosine phosphatases (PTPs) that dephosphorylate D3-phosphorylated inositol lipids. Mutations in this family cause the human neuromuscular disorders myotubular myopathy and type 4B Charcot-Marie-Tooth syndrome. 6 of the 13 MTMRs (MTMRs 5, 9-13) contain naturally occurring substitutions of residues required for catalysis by PTP family enzymes. Although these proteins are predicted to be enzymatically inactive, they are thought to function as antagonists of endogenous phosphatase activity or interaction modules. Most MTMRs contain a N-terminal PH-GRAM domain, a Rac-induced recruitment domain (RID) domain, a PTP domain (which may be active or inactive), a SET-interaction domain, and a C-terminal coiled-coil region. In addition some members contain DENN domain N-terminal to the PH-GRAM domain and FYVE, PDZ, and PH domains C-terminal to the coiled-coil region. The GRAM domain, found in myotubularins, glucosyltransferases, and other putative membrane-associated proteins, is part of a larger motif with a pleckstrin homology (PH) domain fold. The PH domain family possesses multiple functions including the ability to bind phosphoinositides via its beta1/beta2, beta3/beta4, and beta6/beta7 connecting loops and to other proteins. However, no phosphoinositide binding sites have been found for the MTMRs to date.


Pssm-ID: 275418  Cd Length: 178  Bit Score: 44.46  E-value: 2.82e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767908187  46 LPGEQILAWAPGVRKGLEPELS-----GTLICTNFRVTFqpCGWQWNQDT-------PLNSEYDFALVNIGRLEAVSGLS 113
Cdd:cd13348   21 LPGEVVLCEANTVLKYTQDDGSqrgvyGRLVCTNFRIAF--LGDDAPQDDnskqfknKIYGENDITLQCVDQIYGVYDEK 98
                         90       100
                 ....*....|....*....|....*..
gi 767908187 114 RVQLLRPGSLHKFiPEEILIHGRDFRL 140
Cdd:cd13348   99 KKLITGGLVKNKY-PEKLIIHCKDLRV 124
PTP-MTMR6-like cd14532
protein tyrosine phosphatase-like domain of myotubularin related phosphoinositide phosphatases ...
214-368 7.79e-05

protein tyrosine phosphatase-like domain of myotubularin related phosphoinositide phosphatases 6, 7, and 8; This subgroup of enzymatically active phosphatase domains of myotubularins consists of MTMR6, MTMR7 and MTMR8, and related domains. Beside the phosphatase domain, they contain a C-terminal coiled-coil domain and an N-terminal PH-GRAM domain. In general, myotubularins are a unique subgroup of protein tyrosine phosphatases that use inositol phospholipids, rather than phosphoproteins, as substrates. They dephosphorylate the D-3 position of phosphatidylinositol 3-phosphate [PI(3)P] and phosphatidylinositol 3,5-bisphosphate [PI(3,5)P2], generating phosphatidylinositol and phosphatidylinositol 5-phosphate [PI(5)P], respectively. MTMR6, MTMR7 and MTMR8 form complexes with catalytically inactive MTMR9, and display differential substrate preferences. In cells, the MTMR6/R9 complex significantly increases the cellular levels of PtdIns(5)P, the product of PI(3,5)P(2) dephosphorylation, whereas the MTMR8/R9 complex reduces cellular PtdIns(3)P levels. The MTMR6/R9 complex serves to inhibit stress-induced apoptosis while the MTMR8/R9 complex inhibits autophagy.


Pssm-ID: 350380 [Multi-domain]  Cd Length: 301  Bit Score: 44.25  E-value: 7.79e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767908187 214 WRVSTVNERFDVATSLPRYFWVPnRILDSEVRRAFGHFH-QGRGPRLSWHHPGG-SDLLRC----GGFYTASDpnkEDIR 287
Cdd:cd14532   15 WTLSDINKDYELCDTYPRELFVP-TSASTPVLVGSSKFRsKGRLPVLSYLHKDNqAAICRCsqplSGFSARCV---EDEQ 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767908187 288 AVELMLQAG-HSDVV-LVDTMDELPSLA----------------------DVQLAH-LR------LRALCLPDSSVaeDK 336
Cdd:cd14532   91 LLQAIRKANpNSKFMyVVDTRPKINAMAnkaagkgyenednysnikfqffGIENIHvMRsslqklLEVCELKNPSM--SA 168
                        170       180       190
                 ....*....|....*....|....*....|..
gi 767908187 337 WLSALEGTRWLDYVRACLrkasDISVLVTSRV 368
Cdd:cd14532  169 FLSGLESSGWLKHIKAVM----DTSVFIAKAV 196
PTP-MTMR4 cd14587
protein tyrosine phosphatase-like domain of myotubularin related phosphoinositide phosphatase ...
322-387 1.62e-04

protein tyrosine phosphatase-like domain of myotubularin related phosphoinositide phosphatase 4; Myotubularin related phosphoinositide phosphatase 4 (MTMR4), also known as FYVE domain-containing dual specificity protein phosphatase 2 (FYVE-DSP2) or zinc finger FYVE domain-containing protein 11 (ZFYVE11), is enzymatically active and contains a C-terminal FYVE domain and an N-terminal PH-GRAM domain. In general, myotubularins are a unique subgroup of protein tyrosine phosphatases that use inositol phospholipids, rather than phosphoproteins, as substrates. They dephosphorylate the D-3 position of phosphatidylinositol 3-phosphate [PI(3)P] and phosphatidylinositol 3,5-bisphosphate [PI(3,5)P2], generating phosphatidylinositol and phosphatidylinositol 5-phosphate [PI(5)P], respectively. MTMR4 localizes at the interface of early and recycling endosomes to regulate trafficking through this pathway. It plays a role in bacterial pathogenesis by stabilizing the integrity of bacteria-containing vacuoles.


Pssm-ID: 350435 [Multi-domain]  Cd Length: 308  Bit Score: 43.48  E-value: 1.62e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 767908187 322 LRALC--LPDSSvaedKWLSALEGTRWLDYVRACLRKASDISVLVTSRVRSVILQAAFS-PRSPNTVWL 387
Cdd:cd14587  185 LRAVCsqMPDPG----NWLSALESTKWLQHLSVMLKAAVLVASAVDREGRPVLVHCSDGwDRTPQIVAL 249
PTP-MTMR3-like cd14533
protein tyrosine phosphatase-like domain of myotubularin related phosphoinositide phosphatases ...
322-372 5.28e-03

protein tyrosine phosphatase-like domain of myotubularin related phosphoinositide phosphatases 3 and 4; This subgroup of enzymatically active phosphatase domains of myotubularins consists of MTMR3, also known as ZFYVE10, and MTMR4, also known as ZFYVE11, and related domains. Beside the phosphatase domain, they contain a C-terminal FYVE domain and an N-terminal PH-GRAM domain. In general, myotubularins are a unique subgroup of protein tyrosine phosphatases that use inositol phospholipids, rather than phosphoproteins, as substrates. They dephosphorylate the D-3 position of phosphatidylinositol 3-phosphate [PI(3)P] and phosphatidylinositol 3,5-bisphosphate [PI(3,5)P2], generating phosphatidylinositol and phosphatidylinositol 5-phosphate [PI(5)P], respectively.


Pssm-ID: 350381  Cd Length: 229  Bit Score: 38.15  E-value: 5.28e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|.
gi 767908187 322 LRALClpDSSVAEDKWLSALEGTRWLDYVRACLRKASDISVLVTSRVRSVI 372
Cdd:cd14533  106 LRALC--SSAPDQPNWLSNLESTKWLHHLSGLLKAALLVVNAVDEEGRPVL 154
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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