|
Name |
Accession |
Description |
Interval |
E-value |
| COG5048 |
COG5048 |
FOG: Zn-finger [General function prediction only]; |
148-349 |
2.39e-08 |
|
FOG: Zn-finger [General function prediction only];
Pssm-ID: 227381 [Multi-domain] Cd Length: 467 Bit Score: 56.24 E-value: 2.39e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755519340 148 TTTPQSAPSEKPTSGKDVEGKPQTMRSSSTNPKRKPARQGKNHFKCKECGKTFNQTLHLVEHER--IHTGE--KPHKCD- 222
Cdd:COG5048 247 SLSSSDSSSSASESPRSSLPTASSQSSSPNESDSSSEKGFSLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPy 326
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755519340 223 -TCGKSFRHLSYFLTHYRIHTGVRPYKCK--ECGKAFNSSSTLNNHCRIH-----SGEKPFKCD--ECGKTFKQSTKLTR 292
Cdd:COG5048 327 sLCGKLFSRNDALKRHILLHTSISPAKEKllNSSSKFSPLLNNEPPQSLQqykdlKNDKKSETLsnSCIRNFKRDSNLSL 406
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 755519340 293 HQRIHTGEKP--YKCGECNKCFGRSSSLREHKRIHTGEKPYCCQVCGKtFRVNSHLSEH 349
Cdd:COG5048 407 HIITHLSFRPynCKNPPCSKSFNRHYNLIPHKKIHTNHAPLLCSILKS-FRRDLDLSNH 464
|
|
| KRAB |
smart00349 |
krueppel associated box; |
1-27 |
4.87e-06 |
|
krueppel associated box;
Pssm-ID: 214630 [Multi-domain] Cd Length: 61 Bit Score: 44.12 E-value: 4.87e-06
|
| PRK13335 |
PRK13335 |
superantigen-like protein SSL3; Reviewed; |
59-191 |
3.81e-05 |
|
superantigen-like protein SSL3; Reviewed;
Pssm-ID: 139494 [Multi-domain] Cd Length: 356 Bit Score: 45.89 E-value: 3.81e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755519340 59 TGDNSTKAEIRKPDNSKTTSLEKQKAADQGRGSQSLrAEKTSKsddrPSQNKEKCASTSTTEASKTSIPgNKENESAIPG 138
Cdd:PRK13335 56 AGANSATTQAANTRQERTPKLEKAPNTNEEKTSASK-IEKISQ----PKQEEQKSLNISATPAPKQEQS-QTTTESTTPK 129
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 755519340 139 TS-SGQTSAATTTP-QSAPSEKPTS------GKDVEGKPQTMRSSSTnpkrKPARQGKNHF 191
Cdd:PRK13335 130 TKvTTPPSTNTPQPmQSTKSDTPQSptikqaQTDMTPKYEDLRAYYT----KPSFEFEKQF 186
|
|
| zf-H2C2_2 |
pfam13465 |
Zinc-finger double domain; |
205-230 |
9.57e-05 |
|
Zinc-finger double domain;
Pssm-ID: 463886 [Multi-domain] Cd Length: 26 Bit Score: 39.28 E-value: 9.57e-05
10 20
....*....|....*....|....*.
gi 755519340 205 HLVEHERIHTGEKPHKCDTCGKSFRH 230
Cdd:pfam13465 1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| COG5048 |
COG5048 |
FOG: Zn-finger [General function prediction only]; |
148-349 |
2.39e-08 |
|
FOG: Zn-finger [General function prediction only];
Pssm-ID: 227381 [Multi-domain] Cd Length: 467 Bit Score: 56.24 E-value: 2.39e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755519340 148 TTTPQSAPSEKPTSGKDVEGKPQTMRSSSTNPKRKPARQGKNHFKCKECGKTFNQTLHLVEHER--IHTGE--KPHKCD- 222
Cdd:COG5048 247 SLSSSDSSSSASESPRSSLPTASSQSSSPNESDSSSEKGFSLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPy 326
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755519340 223 -TCGKSFRHLSYFLTHYRIHTGVRPYKCK--ECGKAFNSSSTLNNHCRIH-----SGEKPFKCD--ECGKTFKQSTKLTR 292
Cdd:COG5048 327 sLCGKLFSRNDALKRHILLHTSISPAKEKllNSSSKFSPLLNNEPPQSLQqykdlKNDKKSETLsnSCIRNFKRDSNLSL 406
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 755519340 293 HQRIHTGEKP--YKCGECNKCFGRSSSLREHKRIHTGEKPYCCQVCGKtFRVNSHLSEH 349
Cdd:COG5048 407 HIITHLSFRPynCKNPPCSKSFNRHYNLIPHKKIHTNHAPLLCSILKS-FRRDLDLSNH 464
|
|
| COG5048 |
COG5048 |
FOG: Zn-finger [General function prediction only]; |
246-398 |
3.25e-06 |
|
FOG: Zn-finger [General function prediction only];
Pssm-ID: 227381 [Multi-domain] Cd Length: 467 Bit Score: 49.69 E-value: 3.25e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755519340 246 PYKCKECGKAFNSSSTLNNH--CRIHSGE--KPFKCDE--CGKTFKQSTKLTRHQRIHTGEKPYKC--GECNKCFGRSS- 316
Cdd:COG5048 289 PIKSKQCNISFSRSSPLTRHlrSVNHSGEslKPFSCPYslCGKLFSRNDALKRHILLHTSISPAKEklLNSSSKFSPLLn 368
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755519340 317 ----SLREHKRIHTGEKPYCCQV--CGKTFRVNSHLSEHQRLHLKVKP--YKCDKCGKHFRNSSYLTEHKQIHVPGARVD 388
Cdd:COG5048 369 neppQSLQQYKDLKNDKKSETLSnsCIRNFKRDSNLSLHIITHLSFRPynCKNPPCSKSFNRHYNLIPHKKIHTNHAPLL 448
|
170
....*....|
gi 755519340 389 CPECGKVFAC 398
Cdd:COG5048 449 CSILKSFRRD 458
|
|
| COG5048 |
COG5048 |
FOG: Zn-finger [General function prediction only]; |
159-473 |
3.64e-06 |
|
FOG: Zn-finger [General function prediction only];
Pssm-ID: 227381 [Multi-domain] Cd Length: 467 Bit Score: 49.31 E-value: 3.64e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755519340 159 PTSGKDVEGKPQTMRSSStNPKRKPARQGKNHFKCKECGKTFNQTLHLVEHERIHTGEKPHKC--DTCGKSF-RHLSYFL 235
Cdd:COG5048 3 LTSSQSSSSNNSVLSSTP-KSTLKSLSNAPRPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCsySGCDKSFsRPLELSR 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755519340 236 THYRIHTGVRPYKCKECGKAFNSSSTLNNHCRIHSGEKPFKCDECGKTFKQSTKLTRHQRIHTGEKPYKCGECNKCFGRS 315
Cdd:COG5048 82 HLRTHHNNPSDLNSKSLPLSNSKASSSSLSSSSSNSNDNNLLSSHSLPPSSRDPQLPDLLSISNLRNNPLPGNNSSSVNT 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755519340 316 S----------------------SLREHKRIHTGEKPYCCQVCGKTFRVNSHLSEHQRLHLKVKPYKCDKCG----KHFR 369
Cdd:COG5048 162 PqsnslhpplpanslskdpssnlSLLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSqlspKSLL 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755519340 370 NSSYLTEHKQIHVPGARVDCPECGKVFACKVALLKH---QKRHEANSRYRCKGCGKTFRCKSSIQRHER--LHAGE--KP 442
Cdd:COG5048 242 SQSPSSLSSSDSSSSASESPRSSLPTASSQSSSPNEsdsSSEKGFSLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKP 321
|
330 340 350
....*....|....*....|....*....|...
gi 755519340 443 FVC--HKCDKGFTDKTTLNNHLKIHSGDRPDPC 473
Cdd:COG5048 322 FSCpySLCGKLFSRNDALKRHILLHTSISPAKE 354
|
|
| KRAB |
smart00349 |
krueppel associated box; |
1-27 |
4.87e-06 |
|
krueppel associated box;
Pssm-ID: 214630 [Multi-domain] Cd Length: 61 Bit Score: 44.12 E-value: 4.87e-06
|
| COG5048 |
COG5048 |
FOG: Zn-finger [General function prediction only]; |
105-446 |
1.78e-05 |
|
FOG: Zn-finger [General function prediction only];
Pssm-ID: 227381 [Multi-domain] Cd Length: 467 Bit Score: 47.00 E-value: 1.78e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755519340 105 RPSQNKEKCASTSTTEASKTSIPGNKENeSAIPGTSSGQTSAATTTPQSAPSEKPTSGKDVEGKPQTMRSSSTNPKRKPA 184
Cdd:COG5048 89 NPSDLNSKSLPLSNSKASSSSLSSSSSN-SNDNNLLSSHSLPPSSRDPQLPDLLSISNLRNNPLPGNNSSSVNTPQSNSL 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755519340 185 RQGKNHFkCKECGKTFNQTLHLveHERIHTGEKPHKCDTCGKSFRHLSYFLTHYRIHTGVRPYKCKECGKAFNSSSTLNN 264
Cdd:COG5048 168 HPPLPAN-SLSKDPSSNLSLLI--SSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQS 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755519340 265 HCRIHSGEKPFKCDECGKTFKQSTKLTRHQRIHTGE-------KPYKCGECNKCFGRSSSLREHKR--IHTGE--KPYCC 333
Cdd:COG5048 245 PSSLSSSDSSSSASESPRSSLPTASSQSSSPNESDSssekgfsLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSC 324
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755519340 334 --QVCGKTFRVNSHLSEHQRLHLKVKPYKC--DKCGKHFRNSSY-----LTEHKQIHVPGARVDCPECGKVFACK----V 400
Cdd:COG5048 325 pySLCGKLFSRNDALKRHILLHTSISPAKEklLNSSSKFSPLLNneppqSLQQYKDLKNDKKSETLSNSCIRNFKrdsnL 404
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 755519340 401 ALLKHQKRHEANSRYRCKGCGKTFRCKSSIQRHERLHAGEKPFVCH 446
Cdd:COG5048 405 SLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHTNHAPLLCS 450
|
|
| PRK13335 |
PRK13335 |
superantigen-like protein SSL3; Reviewed; |
59-191 |
3.81e-05 |
|
superantigen-like protein SSL3; Reviewed;
Pssm-ID: 139494 [Multi-domain] Cd Length: 356 Bit Score: 45.89 E-value: 3.81e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755519340 59 TGDNSTKAEIRKPDNSKTTSLEKQKAADQGRGSQSLrAEKTSKsddrPSQNKEKCASTSTTEASKTSIPgNKENESAIPG 138
Cdd:PRK13335 56 AGANSATTQAANTRQERTPKLEKAPNTNEEKTSASK-IEKISQ----PKQEEQKSLNISATPAPKQEQS-QTTTESTTPK 129
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 755519340 139 TS-SGQTSAATTTP-QSAPSEKPTS------GKDVEGKPQTMRSSSTnpkrKPARQGKNHF 191
Cdd:PRK13335 130 TKvTTPPSTNTPQPmQSTKSDTPQSptikqaQTDMTPKYEDLRAYYT----KPSFEFEKQF 186
|
|
| SFP1 |
COG5189 |
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ... |
271-349 |
6.71e-05 |
|
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];
Pssm-ID: 227516 [Multi-domain] Cd Length: 423 Bit Score: 45.09 E-value: 6.71e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755519340 271 GEKPFKCD--ECGKTFKQSTKLTRHqRIHtgekpykcGECNKCFGRSSSLREHKRIHTGEKPYCCQVCGKTFRVNSHLSE 348
Cdd:COG5189 346 DGKPYKCPveGCNKKYKNQNGLKYH-MLH--------GHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKY 416
|
.
gi 755519340 349 H 349
Cdd:COG5189 417 H 417
|
|
| zf-H2C2_2 |
pfam13465 |
Zinc-finger double domain; |
205-230 |
9.57e-05 |
|
Zinc-finger double domain;
Pssm-ID: 463886 [Multi-domain] Cd Length: 26 Bit Score: 39.28 E-value: 9.57e-05
10 20
....*....|....*....|....*.
gi 755519340 205 HLVEHERIHTGEKPHKCDTCGKSFRH 230
Cdd:pfam13465 1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
|
|
| zf-H2C2_2 |
pfam13465 |
Zinc-finger double domain; |
262-286 |
1.12e-04 |
|
Zinc-finger double domain;
Pssm-ID: 463886 [Multi-domain] Cd Length: 26 Bit Score: 39.28 E-value: 1.12e-04
|
| zf-H2C2_2 |
pfam13465 |
Zinc-finger double domain; |
317-340 |
2.96e-04 |
|
Zinc-finger double domain;
Pssm-ID: 463886 [Multi-domain] Cd Length: 26 Bit Score: 38.12 E-value: 2.96e-04
|
| SFP1 |
COG5189 |
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ... |
299-378 |
9.43e-04 |
|
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];
Pssm-ID: 227516 [Multi-domain] Cd Length: 423 Bit Score: 41.63 E-value: 9.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755519340 299 GEKPYKCG--ECNKCFGRSSSLREHKRihtgeKPYCCQVCGKTFRVNSHlsehQRLHLKVKPYKCDKCGKHFRNSSYLTE 376
Cdd:COG5189 346 DGKPYKCPveGCNKKYKNQNGLKYHML-----HGHQNQKLHENPSPEKM----NIFSAKDKPYRCEVCDKRYKNLNGLKY 416
|
..
gi 755519340 377 HK 378
Cdd:COG5189 417 HR 418
|
|
| zf-C2H2 |
pfam00096 |
Zinc finger, C2H2 type; The C2H2 zinc finger is the classical zinc finger domain. The two ... |
275-297 |
1.04e-03 |
|
Zinc finger, C2H2 type; The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter.
Pssm-ID: 395048 [Multi-domain] Cd Length: 23 Bit Score: 36.51 E-value: 1.04e-03
|
| zf-H2C2_2 |
pfam13465 |
Zinc-finger double domain; |
290-312 |
1.45e-03 |
|
Zinc-finger double domain;
Pssm-ID: 463886 [Multi-domain] Cd Length: 26 Bit Score: 36.20 E-value: 1.45e-03
|
| zf-H2C2_2 |
pfam13465 |
Zinc-finger double domain; |
237-258 |
2.49e-03 |
|
Zinc-finger double domain;
Pssm-ID: 463886 [Multi-domain] Cd Length: 26 Bit Score: 35.42 E-value: 2.49e-03
|
| PRK08581 |
PRK08581 |
amidase domain-containing protein; |
49-192 |
9.81e-03 |
|
amidase domain-containing protein;
Pssm-ID: 236304 [Multi-domain] Cd Length: 619 Bit Score: 38.62 E-value: 9.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755519340 49 SRSDTSAGKKTGDNSTKAEiRKPDNSKTTSLEKQKAADQgrgSQSLRAEKTSKSDDRPSQNKEKCASTSTTEASKTSIPG 128
Cdd:PRK08581 142 SEKSTNDSNKNSDSSIKND-TDTQSSKQDKADNQKAPSS---NNTKPSTSNKQPNSPKPTQPNQSNSQPASDDTANQKSS 217
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755519340 129 NKENE----SAIPGTSSGQTSAATTTPQS--APSEKPTSGKDVEGKPQTMRSSSTNPKRKPARQGKNHFK 192
Cdd:PRK08581 218 SKDNQsmsdSALDSILDQYSEDAKKTQKDyaSQSKKDKTETSNTKNPQLPTQDELKHKSKPAQSFENDVN 287
|
|
|