NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1840279438|ref|XP_010884693|]
View 

protein O-glucosyltransferase 1 [Esox lucius]

Protein Classification

glycosyltransferase family protein( domain architecture ID 581341)

glycosyltransferase family protein may synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
Glyco_transf_90 super family cl23835
Glycosyl transferase family 90; This family of glycosyl transferases are specifically ...
 48-382 1.60e-124

Glycosyl transferase family 90; This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-.


The actual alignment was detected with superfamily member pfam05686:

Pssm-ID: 329112  Cd Length: 396  Bit Score: 364.88  E-value: 1.60e-124
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840279438  48 CSPNNCSCHLSVVKDDLRPF-SGGVSEDLMAATiRRGVGTHYQIIDHKLYREQ-NCMFPAR----CSGVQHFILQVIDRL 121
Cdd:pfam05686   1 SSSPTCPDYFRWIHEDLEPWrETGITREMVERA-KRKAHFRYVIINGRVYVETyGESFQTRdvftIWGILQLLRKYPGRL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840279438 122 PDMEMVVNVRDYPQV-----PGWVQPTLPVLSFSKTADYRDIMYPAWTFWEggpavWPiyPTGLGRWDIMRDDLQKSAAE 196
Cdd:pfam05686  80 PDLELMFNCGDWPVVkkrdyRGPNANPPPLFSYCGDDDTLDIVFPDWSFWG-----WP--EVNIGRWDLLRKDLKEGNTR 152

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840279438 197 WPWARKDSKGFFRGSRTSPE-RDPLVLLSREDPDLVDAEYTKNqawksEKDTLGRPPAKEIPLVDHCQYKYLFNFRGVAA 275
Cdd:pfam05686 153 VKWEDREPYAYWRGNPSVAEtRLELVKCNRSNPEDWDARLTNQ-----DWDTEYRPGFKHSSLVDQCTHKYKIYIEGVAW 227

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840279438 276 SFRLKHLFLCGSLVFHVGEEWLEFFYPQLVPWVHYIPVK--QDLSDLRELLLFVKENDDAAQEIAVRGQRFILDHLRMED 353
Cdd:pfam05686 228 SVSLKYILACDSLVLHVGPEYYDFFYRGLKPWVHYWPIKsdDDCRDLKEAVDWGNAHDDEAQKIAERGSEFIRENLKMDD 307

                         330       340
                  ....*....|....*....|....*....
gi 1840279438 354 VSCYWERVLTEFGGLLKYRPKRKTNYNQV 382
Cdd:pfam05686 308 VYDYMFHLLTEYAKLLKYKPTVPKGAVEV 336
 
Name Accession Description Interval E-value
Glyco_transf_90 pfam05686
Glycosyl transferase family 90; This family of glycosyl transferases are specifically ...
 48-382 1.60e-124

Glycosyl transferase family 90; This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-.


Pssm-ID: 310354  Cd Length: 396  Bit Score: 364.88  E-value: 1.60e-124
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840279438  48 CSPNNCSCHLSVVKDDLRPF-SGGVSEDLMAATiRRGVGTHYQIIDHKLYREQ-NCMFPAR----CSGVQHFILQVIDRL 121
Cdd:pfam05686   1 SSSPTCPDYFRWIHEDLEPWrETGITREMVERA-KRKAHFRYVIINGRVYVETyGESFQTRdvftIWGILQLLRKYPGRL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840279438 122 PDMEMVVNVRDYPQV-----PGWVQPTLPVLSFSKTADYRDIMYPAWTFWEggpavWPiyPTGLGRWDIMRDDLQKSAAE 196
Cdd:pfam05686  80 PDLELMFNCGDWPVVkkrdyRGPNANPPPLFSYCGDDDTLDIVFPDWSFWG-----WP--EVNIGRWDLLRKDLKEGNTR 152

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840279438 197 WPWARKDSKGFFRGSRTSPE-RDPLVLLSREDPDLVDAEYTKNqawksEKDTLGRPPAKEIPLVDHCQYKYLFNFRGVAA 275
Cdd:pfam05686 153 VKWEDREPYAYWRGNPSVAEtRLELVKCNRSNPEDWDARLTNQ-----DWDTEYRPGFKHSSLVDQCTHKYKIYIEGVAW 227

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840279438 276 SFRLKHLFLCGSLVFHVGEEWLEFFYPQLVPWVHYIPVK--QDLSDLRELLLFVKENDDAAQEIAVRGQRFILDHLRMED 353
Cdd:pfam05686 228 SVSLKYILACDSLVLHVGPEYYDFFYRGLKPWVHYWPIKsdDDCRDLKEAVDWGNAHDDEAQKIAERGSEFIRENLKMDD 307

                         330       340
                  ....*....|....*....|....*....
gi 1840279438 354 VSCYWERVLTEFGGLLKYRPKRKTNYNQV 382
Cdd:pfam05686 308 VYDYMFHLLTEYAKLLKYKPTVPKGAVEV 336
CAP10 smart00672
Putative lipopolysaccharide-modifying enzyme;
120-371 1.51e-92

Putative lipopolysaccharide-modifying enzyme;


Pssm-ID: 214773  Cd Length: 256  Bit Score: 278.15  E-value: 1.51e-92
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840279438  120 RLPDMEMVVNVRDYPQV------PGWVQPTLPVLSFSKTADYRDIMYPAWTFWEGgpavwpiYPTGLGR-WDIMRDDLQK 192
Cdd:smart00672   1 RVPDLELMFNCRDWPLInkksfaSYNQHAPPPLFSYCGSDEYLDIVFPDWSFWAG-------WPEVNGRpWDKDLMELEE 73

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840279438  193 SAAEWPWARKDSKGFFRGSRTSP-ERDPLVLLSREDPDLVDAEYTKNQAWKSEKDTLGRPPAKEIPLVDHCQYKYLFNFR 271
Cdd:smart00672  74 GNKRTKWSDKNAYAYWRGNPTVAsERLDLIKCNQSSPELVNARITIQDWPGKCDGEEDAPGFKKSPLEEQCKHKYKINIE 153

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840279438  272 GVAASFRLKHLFLCGSLVFHVGEEWLEFFYPQLVPWVHYIPVKQDLSD--LRELLLFVKENDDAAQEIAVRGQRFILDHL 349
Cdd:smart00672 154 GVAWSVRLKYILACDSVVLKVKPEYYEFFSRGLQPWVHYWPIKSDLSCreLKEAVDWGNEHDKKAQEIGKRGSEFIQQNL 233

                          250       260
                   ....*....|....*....|..
gi 1840279438  350 RMEDVSCYWERVLTEFGGLLKY 371
Cdd:smart00672 234 SMEDVYDYMFHLLQEYAKLLKY 255
 
Name Accession Description Interval E-value
Glyco_transf_90 pfam05686
Glycosyl transferase family 90; This family of glycosyl transferases are specifically ...
 48-382 1.60e-124

Glycosyl transferase family 90; This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-.


Pssm-ID: 310354  Cd Length: 396  Bit Score: 364.88  E-value: 1.60e-124
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840279438  48 CSPNNCSCHLSVVKDDLRPF-SGGVSEDLMAATiRRGVGTHYQIIDHKLYREQ-NCMFPAR----CSGVQHFILQVIDRL 121
Cdd:pfam05686   1 SSSPTCPDYFRWIHEDLEPWrETGITREMVERA-KRKAHFRYVIINGRVYVETyGESFQTRdvftIWGILQLLRKYPGRL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840279438 122 PDMEMVVNVRDYPQV-----PGWVQPTLPVLSFSKTADYRDIMYPAWTFWEggpavWPiyPTGLGRWDIMRDDLQKSAAE 196
Cdd:pfam05686  80 PDLELMFNCGDWPVVkkrdyRGPNANPPPLFSYCGDDDTLDIVFPDWSFWG-----WP--EVNIGRWDLLRKDLKEGNTR 152

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840279438 197 WPWARKDSKGFFRGSRTSPE-RDPLVLLSREDPDLVDAEYTKNqawksEKDTLGRPPAKEIPLVDHCQYKYLFNFRGVAA 275
Cdd:pfam05686 153 VKWEDREPYAYWRGNPSVAEtRLELVKCNRSNPEDWDARLTNQ-----DWDTEYRPGFKHSSLVDQCTHKYKIYIEGVAW 227

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840279438 276 SFRLKHLFLCGSLVFHVGEEWLEFFYPQLVPWVHYIPVK--QDLSDLRELLLFVKENDDAAQEIAVRGQRFILDHLRMED 353
Cdd:pfam05686 228 SVSLKYILACDSLVLHVGPEYYDFFYRGLKPWVHYWPIKsdDDCRDLKEAVDWGNAHDDEAQKIAERGSEFIRENLKMDD 307

                         330       340
                  ....*....|....*....|....*....
gi 1840279438 354 VSCYWERVLTEFGGLLKYRPKRKTNYNQV 382
Cdd:pfam05686 308 VYDYMFHLLTEYAKLLKYKPTVPKGAVEV 336
CAP10 smart00672
Putative lipopolysaccharide-modifying enzyme;
120-371 1.51e-92

Putative lipopolysaccharide-modifying enzyme;


Pssm-ID: 214773  Cd Length: 256  Bit Score: 278.15  E-value: 1.51e-92
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840279438  120 RLPDMEMVVNVRDYPQV------PGWVQPTLPVLSFSKTADYRDIMYPAWTFWEGgpavwpiYPTGLGR-WDIMRDDLQK 192
Cdd:smart00672   1 RVPDLELMFNCRDWPLInkksfaSYNQHAPPPLFSYCGSDEYLDIVFPDWSFWAG-------WPEVNGRpWDKDLMELEE 73

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840279438  193 SAAEWPWARKDSKGFFRGSRTSP-ERDPLVLLSREDPDLVDAEYTKNQAWKSEKDTLGRPPAKEIPLVDHCQYKYLFNFR 271
Cdd:smart00672  74 GNKRTKWSDKNAYAYWRGNPTVAsERLDLIKCNQSSPELVNARITIQDWPGKCDGEEDAPGFKKSPLEEQCKHKYKINIE 153

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840279438  272 GVAASFRLKHLFLCGSLVFHVGEEWLEFFYPQLVPWVHYIPVKQDLSD--LRELLLFVKENDDAAQEIAVRGQRFILDHL 349
Cdd:smart00672 154 GVAWSVRLKYILACDSVVLKVKPEYYEFFSRGLQPWVHYWPIKSDLSCreLKEAVDWGNEHDKKAQEIGKRGSEFIQQNL 233

                          250       260
                   ....*....|....*....|..
gi 1840279438  350 RMEDVSCYWERVLTEFGGLLKY 371
Cdd:smart00672 234 SMEDVYDYMFHLLQEYAKLLKY 255
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH