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Conserved domains on  [gi|719730435|ref|XP_010226543|]
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PREDICTED: dnaJ homolog subfamily B member 6 [Tinamus guttatus]

Protein Classification

molecular chaperone DnaJ( domain architecture ID 1000952)

molecular chaperone DnaJ, part of the DnaK-DnaJ-GrpE system, prevents the aggregation of unfolded substrate and acts primarily by stimulating the ATPase activity of Hsp70

CATH:  2.10.230.10
Gene Ontology:  GO:0051082|GO:0005524|GO:0009408|GO:0006457
PubMed:  8016869|15063739|29290615
SCOP:  4003813|4002149

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK10767 super family cl35946
chaperone protein DnaJ; Provisional
 3-107 1.98e-42

chaperone protein DnaJ; Provisional


The actual alignment was detected with superfamily member PRK10767:

Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 147.60  E-value: 1.98e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 719730435   3 DYYEVLGVQKHASPEDIKKAYRKLALKWHPDKNPDNKeEAERQFKQVAEAYEVLSDAKKRDIYDKYGKEGLmNGGGGGSH 82
Cdd:PRK10767   5 DYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDK-EAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAF-EQGGGGGG 82

                         90       100
                 ....*....|....*....|....*
gi 719730435  83 FDNQFGFGFTFrnpEDVFREFFGGR 107
Cdd:PRK10767  83 FGGGGGFGDIF---GDIFGDIFGGG 104
 
Name Accession Description Interval E-value
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 3-107 1.98e-42

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 147.60  E-value: 1.98e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 719730435   3 DYYEVLGVQKHASPEDIKKAYRKLALKWHPDKNPDNKeEAERQFKQVAEAYEVLSDAKKRDIYDKYGKEGLmNGGGGGSH 82
Cdd:PRK10767   5 DYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDK-EAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAF-EQGGGGGG 82

                         90       100
                 ....*....|....*....|....*
gi 719730435  83 FDNQFGFGFTFrnpEDVFREFFGGR 107
Cdd:PRK10767  83 FGGGGGFGDIF---GDIFGDIFGGG 104
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 3-106 1.74e-39

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 139.27  E-value: 1.74e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 719730435    3 DYYEVLGVQKHASPEDIKKAYRKLALKWHPDKNPDnkEEAERQFKQVAEAYEVLSDAKKRDIYDKYGKEGLmNGGGGGSH 82
Cdd:TIGR02349   1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD--KEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGF-NGGGGGGG 77

                          90       100
                  ....*....|....*....|....
gi 719730435   83 FDNQFGFGFTFRNPEDVFREFFGG 106
Cdd:TIGR02349  78 GGFNGFDIGFFGDFGDIFGDFFGG 101
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 3-73 5.61e-37

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 126.74  E-value: 5.61e-37
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 719730435   3 DYYEVLGVQKHASPEDIKKAYRKLALKWHPDKNPDNKeEAERQFKQVAEAYEVLSDAKKRDIYDKYGKEGL 73
Cdd:COG0484    1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDP-EAEEKFKEINEAYEVLSDPEKRAAYDRFGHAAE 70
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 3-66 1.57e-36

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 122.97  E-value: 1.57e-36
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 719730435    3 DYYEVLGVQKHASPEDIKKAYRKLALKWHPDKNPDNKeEAERQFKQVAEAYEVLSDAKKRDIYD 66
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDP-EAEEKFKEINEAYEVLSDPEKRAIYD 63
DnaJ smart00271
DnaJ molecular chaperone homology domain;
2-61 4.42e-32

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 111.56  E-value: 4.42e-32
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 719730435     2 VDYYEVLGVQKHASPEDIKKAYRKLALKWHPDKNPDNKEEAERQFKQVAEAYEVLSDAKK 61
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
3-106 4.64e-30

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 116.07  E-value: 4.64e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 719730435   3 DYYEVLGVQKHASPEDIKKAYRKLALKWHPDKNpdNKEEAERQFKQVAEAYEVLSDAKKRDIYDKYGKEGLmngggggsh 82
Cdd:NF037946   6 DYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRN--KAPDAAEIFAEINEAYEVLSNPEKRANYDKYGHDGV--------- 74

                         90       100
                 ....*....|....*....|....
gi 719730435  83 fDNQFGFGFtfrNPEDVFREFFGG 106
Cdd:NF037946  75 -DGEGGFGF---DAFDVFSSFFET 94
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 3-58 4.56e-29

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 103.78  E-value: 4.56e-29
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 719730435   3 DYYEVLGVQKHASPEDIKKAYRKLALKWHPDKNPDNkEEAERQFKQVAEAYEVLSD 58
Cdd:cd06257    1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDD-PEAEEKFKEINEAYEVLSD 55
 
Name Accession Description Interval E-value
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 3-107 1.98e-42

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 147.60  E-value: 1.98e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 719730435   3 DYYEVLGVQKHASPEDIKKAYRKLALKWHPDKNPDNKeEAERQFKQVAEAYEVLSDAKKRDIYDKYGKEGLmNGGGGGSH 82
Cdd:PRK10767   5 DYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDK-EAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAF-EQGGGGGG 82

                         90       100
                 ....*....|....*....|....*
gi 719730435  83 FDNQFGFGFTFrnpEDVFREFFGGR 107
Cdd:PRK10767  83 FGGGGGFGDIF---GDIFGDIFGGG 104
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 3-106 1.74e-39

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 139.27  E-value: 1.74e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 719730435    3 DYYEVLGVQKHASPEDIKKAYRKLALKWHPDKNPDnkEEAERQFKQVAEAYEVLSDAKKRDIYDKYGKEGLmNGGGGGSH 82
Cdd:TIGR02349   1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD--KEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGF-NGGGGGGG 77

                          90       100
                  ....*....|....*....|....
gi 719730435   83 FDNQFGFGFTFRNPEDVFREFFGG 106
Cdd:TIGR02349  78 GGFNGFDIGFFGDFGDIFGDFFGG 101
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 3-73 5.61e-37

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 126.74  E-value: 5.61e-37
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 719730435   3 DYYEVLGVQKHASPEDIKKAYRKLALKWHPDKNPDNKeEAERQFKQVAEAYEVLSDAKKRDIYDKYGKEGL 73
Cdd:COG0484    1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDP-EAEEKFKEINEAYEVLSDPEKRAAYDRFGHAAE 70
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 3-66 1.57e-36

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 122.97  E-value: 1.57e-36
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 719730435    3 DYYEVLGVQKHASPEDIKKAYRKLALKWHPDKNPDNKeEAERQFKQVAEAYEVLSDAKKRDIYD 66
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDP-EAEEKFKEINEAYEVLSDPEKRAIYD 63
PRK14294 PRK14294
chaperone protein DnaJ; Provisional
 3-105 9.99e-36

chaperone protein DnaJ; Provisional


Pssm-ID: 237664 [Multi-domain]  Cd Length: 366  Bit Score: 129.88  E-value: 9.99e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 719730435   3 DYYEVLGVQKHASPEDIKKAYRKLALKWHPDKNPDNKeEAERQFKQVAEAYEVLSDAKKRDIYDKYGKEGLMNG-GGGGS 81
Cdd:PRK14294   5 DYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDK-EAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSGTgFSGFS 83

                         90       100
                 ....*....|....*....|....*
gi 719730435  82 HFDNQFG-FGftfrnpeDVFREFFG 105
Cdd:PRK14294  84 GFDDIFSsFG-------DIFEDFFG 101
DnaJ smart00271
DnaJ molecular chaperone homology domain;
2-61 4.42e-32

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 111.56  E-value: 4.42e-32
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 719730435     2 VDYYEVLGVQKHASPEDIKKAYRKLALKWHPDKNPDNKEEAERQFKQVAEAYEVLSDAKK 61
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60
PRK14301 PRK14301
chaperone protein DnaJ; Provisional
 3-103 4.76e-32

chaperone protein DnaJ; Provisional


Pssm-ID: 237668 [Multi-domain]  Cd Length: 373  Bit Score: 120.23  E-value: 4.76e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 719730435   3 DYYEVLGVQKHASPEDIKKAYRKLALKWHPDKNPDNkEEAERQFKQVAEAYEVLSDAKKRDIYDKYGKEGLmngggggsh 82
Cdd:PRK14301   5 DYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDN-PEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGV--------- 74

                         90       100
                 ....*....|....*....|.
gi 719730435  83 fdNQFGFGFTFRNPEDVFREF 103
Cdd:PRK14301  75 --NGNGGFGGFSSAEDIFSHF 93
PRK14284 PRK14284
chaperone protein DnaJ; Provisional
 3-105 8.33e-32

chaperone protein DnaJ; Provisional


Pssm-ID: 237658 [Multi-domain]  Cd Length: 391  Bit Score: 119.95  E-value: 8.33e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 719730435   3 DYYEVLGVQKHASPEDIKKAYRKLALKWHPDKNPDNKeEAERQFKQVAEAYEVLSDAKKRDIYDKYGKEGLmngggggsh 82
Cdd:PRK14284   2 DYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDA-EAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGP--------- 71

                         90       100
                 ....*....|....*....|....
gi 719730435  83 FDNQFGFGFT-FRNPEDVFREFFG 105
Cdd:PRK14284  72 FAGAGGFGGAgMGNMEDALRTFMG 95
PRK14298 PRK14298
chaperone protein DnaJ; Provisional
 3-106 9.09e-31

chaperone protein DnaJ; Provisional


Pssm-ID: 184612 [Multi-domain]  Cd Length: 377  Bit Score: 116.87  E-value: 9.09e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 719730435   3 DYYEVLGVQKHASPEDIKKAYRKLALKWHPDKNPDnkEEAERQFKQVAEAYEVLSDAKKRDIYDKYGKEGLMNGGGGGSH 82
Cdd:PRK14298   6 DYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKE--PDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDNQYSAEDI 83

                         90       100
                 ....*....|....*....|....*
gi 719730435  83 FDN-QFGfGFtfrnpEDVFREFFGG 106
Cdd:PRK14298  84 FRGaDFG-GF-----GDIFEMFFGG 102
PRK14280 PRK14280
molecular chaperone DnaJ;
3-109 1.23e-30

molecular chaperone DnaJ;


Pssm-ID: 237656 [Multi-domain]  Cd Length: 376  Bit Score: 116.36  E-value: 1.23e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 719730435   3 DYYEVLGVQKHASPEDIKKAYRKLALKWHPDKnpdNKEE-AERQFKQVAEAYEVLSDAKKRDIYDKYGKEGLMNGGGGGS 81
Cdd:PRK14280   5 DYYEVLGVSKSASKDEIKKAYRKLSKKYHPDI---NKEEgADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQGFGGGG 81

                         90       100       110
                 ....*....|....*....|....*....|..
gi 719730435  82 HFDNQFGFGFTFrnpEDVFREFFGG----RDP 109
Cdd:PRK14280  82 FGGGDFGGGFGF---EDIFSSFFGGggrrRDP 110
PRK14290 PRK14290
chaperone protein DnaJ; Provisional
 3-106 4.40e-30

chaperone protein DnaJ; Provisional


Pssm-ID: 172778 [Multi-domain]  Cd Length: 365  Bit Score: 114.64  E-value: 4.40e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 719730435   3 DYYEVLGVQKHASPEDIKKAYRKLALKWHPDKNPDNKEEAERQFKQVAEAYEVLSDAKKRDIYDKYGKeglMNGGGGGSH 82
Cdd:PRK14290   4 DYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGT---VDFGAGGSN 80

                         90       100
                 ....*....|....*....|....*
gi 719730435  83 FDNQfgfGFT-FRNPEDVFREFFGG 106
Cdd:PRK14290  81 FNWD---NFThFSDINDIFNQIFGG 102
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
3-106 4.64e-30

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 116.07  E-value: 4.64e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 719730435   3 DYYEVLGVQKHASPEDIKKAYRKLALKWHPDKNpdNKEEAERQFKQVAEAYEVLSDAKKRDIYDKYGKEGLmngggggsh 82
Cdd:NF037946   6 DYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRN--KAPDAAEIFAEINEAYEVLSNPEKRANYDKYGHDGV--------- 74

                         90       100
                 ....*....|....*....|....
gi 719730435  83 fDNQFGFGFtfrNPEDVFREFFGG 106
Cdd:NF037946  75 -DGEGGFGF---DAFDVFSSFFET 94
PRK14291 PRK14291
chaperone protein DnaJ; Provisional
 3-106 5.06e-30

chaperone protein DnaJ; Provisional


Pssm-ID: 237661 [Multi-domain]  Cd Length: 382  Bit Score: 114.87  E-value: 5.06e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 719730435   3 DYYEVLGVQKHASPEDIKKAYRKLALKWHPDKNPDnkEEAERQFKQVAEAYEVLSDAKKRDIYDKYGKEGLMNGGGGGSH 82
Cdd:PRK14291   4 DYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN--PEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSGQQQQG 81

                         90       100
                 ....*....|....*....|....
gi 719730435  83 FDNQFGFGFTfrNPEDVFREFFGG 106
Cdd:PRK14291  82 QEGFSDFGGG--NIEDILEDVFDI 103
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
 3-110 6.95e-30

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 114.50  E-value: 6.95e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 719730435   3 DYYEVLGVQKHASPEDIKKAYRKLALKWHPDKNPDNKEEAERQFKQVAEAYEVLSDAKKRDIYDKYGKEGlmnggggGSH 82
Cdd:PRK14282   5 DYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVG-------EQP 77

                         90       100       110
                 ....*....|....*....|....*....|
gi 719730435  83 FDNQFGFGFTFRnpEDVFREF--FGGRDPF 110
Cdd:PRK14282  78 PYQETESGGGFF--EDIFKDFenIFNRDIF 105
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 3-58 4.56e-29

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 103.78  E-value: 4.56e-29
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 719730435   3 DYYEVLGVQKHASPEDIKKAYRKLALKWHPDKNPDNkEEAERQFKQVAEAYEVLSD 58
Cdd:cd06257    1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDD-PEAEEKFKEINEAYEVLSD 55
PRK14276 PRK14276
chaperone protein DnaJ; Provisional
 3-109 5.32e-29

chaperone protein DnaJ; Provisional


Pssm-ID: 237653 [Multi-domain]  Cd Length: 380  Bit Score: 112.10  E-value: 5.32e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 719730435   3 DYYEVLGVQKHASPEDIKKAYRKLALKWHPDKNpdnKEE-AERQFKQVAEAYEVLSDAKKRDIYDKYGKEGlMN-----G 76
Cdd:PRK14276   5 EYYDRLGVSKDASQDEIKKAYRKLSKKYHPDIN---KEPgAEEKYKEVQEAYETLSDPQKRAAYDQYGAAG-ANggfggG 80

                         90       100       110
                 ....*....|....*....|....*....|....*...
gi 719730435  77 GGGGSHFDNQFGFG-FtfrnpEDVFREFFGG----RDP 109
Cdd:PRK14276  81 AGGFGGFDGSGGFGgF-----EDIFSSFFGGggarRNP 113
PRK14289 PRK14289
molecular chaperone DnaJ;
3-154 1.26e-28

molecular chaperone DnaJ;


Pssm-ID: 237660 [Multi-domain]  Cd Length: 386  Bit Score: 111.08  E-value: 1.26e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 719730435   3 DYYEVLGVQKHASPEDIKKAYRKLALKWHPDKNPDNKeEAERQFKQVAEAYEVLSDAKKRDIYDKYGKEGLMNGGGGGsh 82
Cdd:PRK14289   6 DYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDK-EAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGVGGAAGGG-- 82

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 719730435  83 fdnqfGFGFTFRNPEDVFREF---FGGrdpfsfeffedpfddffgnrrgprnrnrgggsFFSAFSGFPAFGGGFS 154
Cdd:PRK14289  83 -----GFSGEGMSMEDIFSMFgdiFGG--------------------------------HGGGFGGFGGFGGGGS 120
PRK14278 PRK14278
chaperone protein DnaJ; Provisional
 3-106 1.35e-28

chaperone protein DnaJ; Provisional


Pssm-ID: 237654 [Multi-domain]  Cd Length: 378  Bit Score: 110.91  E-value: 1.35e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 719730435   3 DYYEVLGVQKHASPEDIKKAYRKLALKWHPDKNPDnkEEAERQFKQVAEAYEVLSDAKKRDIYDkYGKEGLMNGGGGGSh 82
Cdd:PRK14278   4 DYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPD--EEAQEKFKEISVAYEVLSDPEKRRIVD-LGGDPLESAGGGGG- 79

                         90       100
                 ....*....|....*....|....
gi 719730435  83 fdnqfGFGFTFRNPEDVFREFFGG 106
Cdd:PRK14278  80 -----GFGGGFGGLGDVFEAFFGG 98
PRK14281 PRK14281
chaperone protein DnaJ; Provisional
 3-106 5.30e-28

chaperone protein DnaJ; Provisional


Pssm-ID: 237657 [Multi-domain]  Cd Length: 397  Bit Score: 109.90  E-value: 5.30e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 719730435   3 DYYEVLGVQKHASPEDIKKAYRKLALKWHPDKNPDNKeEAERQFKQVAEAYEVLSDAKKRDIYDKYGKEGLMNGGGGG-- 80
Cdd:PRK14281   4 DYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNK-EAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAASGgg 82

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|.
gi 719730435  81 --------------SHFDNQFGFGFTFR-NPEDVFREFFGG 106
Cdd:PRK14281  83 pgygggggdfndifSAFNDMFGGGARRGgGSPFGFEDVFGG 123
PRK14297 PRK14297
molecular chaperone DnaJ;
3-106 6.02e-28

molecular chaperone DnaJ;


Pssm-ID: 184611 [Multi-domain]  Cd Length: 380  Bit Score: 109.49  E-value: 6.02e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 719730435   3 DYYEVLGVQKHASPEDIKKAYRKLALKWHPDKNPDNKeEAERQFKQVAEAYEVLSDAKKRDIYDKYGkeglmnggggGSH 82
Cdd:PRK14297   5 DYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNK-EAEEKFKEINEAYQVLSDPQKKAQYDQFG----------TAD 73

                         90       100       110
                 ....*....|....*....|....*....|...
gi 719730435  83 FDNQFGFGF---------TFRNPEDVFREFFGG 106
Cdd:PRK14297  74 FNGAGGFGSggfggfdfsDMGGFGDIFDSFFGG 106
SEC63 COG5407
Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular ...
 3-62 8.19e-28

Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 444165 [Multi-domain]  Cd Length: 61  Bit Score: 100.84  E-value: 8.19e-28
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 719730435   3 DYYEVLGVQKHASPEDIKKAYRKLALKWHPDKNPDNKEEAERqFKQVAEAYEVLSDAKKR 62
Cdd:COG5407    1 DPYEVLGVAKTASADEIKKAYRKLAKKYHPDRNKGDPKAEER-FKEINEAYELLSDAEKR 59
PRK14277 PRK14277
chaperone protein DnaJ; Provisional
 3-105 1.19e-27

chaperone protein DnaJ; Provisional


Pssm-ID: 184599 [Multi-domain]  Cd Length: 386  Bit Score: 108.73  E-value: 1.19e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 719730435   3 DYYEVLGVQKHASPEDIKKAYRKLALKWHPDKNPDNKeEAERQFKQVAEAYEVLSDAKKRDIYDKYGKEGLMNGGGGGSH 82
Cdd:PRK14277   6 DYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDK-EAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGGFGQGG 84

                         90       100
                 ....*....|....*....|....*..
gi 719730435  83 FDN----QFGFGFTFRNPEDVFREFFG 105
Cdd:PRK14277  85 FGQggfgGGGFDFDFGGFGDIFEDIFG 111
PRK14286 PRK14286
chaperone protein DnaJ; Provisional
 4-106 3.18e-27

chaperone protein DnaJ; Provisional


Pssm-ID: 172774 [Multi-domain]  Cd Length: 372  Bit Score: 107.38  E-value: 3.18e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 719730435   4 YYEVLGVQKHASPEDIKKAYRKLALKWHPDKNPDNKeEAERQFKQVAEAYEVLSDAKKRDIYDKYGKEGLMN-----GGG 78
Cdd:PRK14286   6 YYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNK-ESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAgaggfGQG 84

                         90       100
                 ....*....|....*....|....*....
gi 719730435  79 GGSHFDNQFG-FGftfrnpeDVFREFFGG 106
Cdd:PRK14286  85 AYTDFSDIFGdFG-------DIFGDFFGG 106
CbpA COG2214
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
1-66 6.93e-27

Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];


Pssm-ID: 441816 [Multi-domain]  Cd Length: 91  Bit Score: 99.41  E-value: 6.93e-27
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 719730435   1 MVDYYEVLGVQKHASPEDIKKAYRKLALKWHPDKNPDNKEEAERQFKQVAEAYEVLSDAKKRDIYD 66
Cdd:COG2214    4 LKDHYAVLGVPPDASLEEIRQAYRRLAKLLHPDRGGELKALAEELFQRLNEAYEVLSDPERRAEYD 69
PRK14283 PRK14283
chaperone protein DnaJ; Provisional
 3-106 1.20e-26

chaperone protein DnaJ; Provisional


Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 105.68  E-value: 1.20e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 719730435   3 DYYEVLGVQKHASPEDIKKAYRKLALKWHPDKNPDnkEEAERQFKQVAEAYEVLSDAKKRDIYDKYGKEGlMNGGGGGSH 82
Cdd:PRK14283   6 DYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEE--EGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAG-MDGFSQEDI 82

                         90       100       110
                 ....*....|....*....|....*....|
gi 719730435  83 FDN-QF-----GFGFTFRNPEDVFRefFGG 106
Cdd:PRK14283  83 FNNiNFedifqGFGFGIGNIFDMFG--FGG 110
PRK14292 PRK14292
chaperone protein DnaJ; Provisional
 1-106 5.04e-26

chaperone protein DnaJ; Provisional


Pssm-ID: 237662 [Multi-domain]  Cd Length: 371  Bit Score: 103.82  E-value: 5.04e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 719730435   1 MVDYYEVLGVQKHASPEDIKKAYRKLALKWHPDKNPDnkEEAERQFKQVAEAYEVLSDAKKRDIYDKYGKEGLMNGGGGg 80
Cdd:PRK14292   1 MMDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKE--KGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAPGAGMPGG- 77

                         90       100
                 ....*....|....*....|....*.
gi 719730435  81 shfDNQFGFGFtfrNPEDVFREFFGG 106
Cdd:PRK14292  78 ---DPFGGMGF---DPMDIFEQLFGG 97
PRK14293 PRK14293
molecular chaperone DnaJ;
1-106 6.53e-25

molecular chaperone DnaJ;


Pssm-ID: 237663 [Multi-domain]  Cd Length: 374  Bit Score: 100.83  E-value: 6.53e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 719730435   1 MVDYYEVLGVQKHASPEDIKKAYRKLALKWHPDKnpdNKEE-AERQFKQVAEAYEVLSDAKKRDIYDKYGKEGLmNGGGG 79
Cdd:PRK14293   2 AADYYEILGVSRDADKDELKRAYRRLARKYHPDV---NKEPgAEDRFKEINRAYEVLSDPETRARYDQFGEAGV-SGAAG 77

                         90       100
                 ....*....|....*....|....*..
gi 719730435  80 GSHFDNQFGFGftfrnpeDVFREFFGG 106
Cdd:PRK14293  78 FPDMGDMGGFA-------DIFETFFSG 97
PRK14279 PRK14279
molecular chaperone DnaJ;
3-66 1.65e-24

molecular chaperone DnaJ;


Pssm-ID: 237655 [Multi-domain]  Cd Length: 392  Bit Score: 100.19  E-value: 1.65e-24
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 719730435   3 DYYEVLGVQKHASPEDIKKAYRKLALKWHPDKNPDNKEEAERqFKQVAEAYEVLSDAKKRDIYD 66
Cdd:PRK14279  10 DFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEER-FKAVSEAHDVLSDPAKRKEYD 72
PRK14285 PRK14285
chaperone protein DnaJ; Provisional
 3-107 2.08e-24

chaperone protein DnaJ; Provisional


Pssm-ID: 172773 [Multi-domain]  Cd Length: 365  Bit Score: 99.68  E-value: 2.08e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 719730435   3 DYYEVLGVQKHASPEDIKKAYRKLALKWHPDKNPDNKeEAERQFKQVAEAYEVLSDAKKRDIYDKYGKEGLmNGGGGGSH 82
Cdd:PRK14285   4 DYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNK-EAESIFKEATEAYEVLIDDNKRAQYDRFGHTAF-EGGGGFEG 81

                         90       100
                 ....*....|....*....|....*.
gi 719730435  83 FDNQF-GFGFTFRNPEDVFREFFGGR 107
Cdd:PRK14285  82 FSGGFsGFSDIFEDFGDIFDSFFTGN 107
PRK14299 PRK14299
chaperone protein DnaJ; Provisional
 3-110 3.89e-24

chaperone protein DnaJ; Provisional


Pssm-ID: 237667 [Multi-domain]  Cd Length: 291  Bit Score: 97.32  E-value: 3.89e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 719730435   3 DYYEVLGVQKHASPEDIKKAYRKLALKWHPDKNPDnkEEAERQFKQVAEAYEVLSDAKKRDIYDKYGKEGLMNGGGGGSH 82
Cdd:PRK14299   5 DYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKS--PGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQGPPP 82

                         90       100       110
                 ....*....|....*....|....*....|.
gi 719730435  83 FDNQFGfGFTFRNPED---VFREFFGGRDPF 110
Cdd:PRK14299  83 GPPGGG-DFSGFNVGDfsdFFQQLFGGRGGF 112
termin_org_DnaJ TIGR03835
terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ ...
 3-104 2.87e-23

terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 274808 [Multi-domain]  Cd Length: 871  Bit Score: 97.96  E-value: 2.87e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 719730435    3 DYYEVLGVQKHASPEDIKKAYRKLALKWHPDKNpdNKEEAERQFKQVAEAYEVLSDAKKRDIYDKYGKEGLmngggggsh 82
Cdd:TIGR03835   3 DYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRN--KAPDAASIFAEINEANDVLSNPKKRANYDKYGHDGV--------- 71

                          90       100
                  ....*....|....*....|..
gi 719730435   83 fDNQFGFGFTfrnpEDVFREFF 104
Cdd:TIGR03835  72 -DREDDFDFQ----ADVFNSFF 88
PTZ00037 PTZ00037
DnaJ_C chaperone protein; Provisional
 4-106 1.38e-22

DnaJ_C chaperone protein; Provisional


Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 94.89  E-value: 1.38e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 719730435   4 YYEVLGVQKHASPEDIKKAYRKLALKWHPDKNPDnkeeaERQFKQVAEAYEVLSDAKKRDIYDKYGKEGLMNgggggshf 83
Cdd:PTZ00037  30 LYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD-----PEKFKEISRAYEVLSDPEKRKIYDEYGEEGLEG-------- 96

                         90       100
                 ....*....|....*....|...
gi 719730435  84 dnqfgfGFTFRNPEDVFREFFGG 106
Cdd:PTZ00037  97 ------GEQPADASDLFDLIFGG 113
PRK14288 PRK14288
molecular chaperone DnaJ;
2-94 7.84e-22

molecular chaperone DnaJ;


Pssm-ID: 172776 [Multi-domain]  Cd Length: 369  Bit Score: 92.44  E-value: 7.84e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 719730435   2 VDYYEVLGVQKHASPEDIKKAYRKLALKWHPDKNPDNKeEAERQFKQVAEAYEVLSDAKKRDIYDKYGKEGLMNGGGGGS 81
Cdd:PRK14288   3 LSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDK-EAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQAGASQS 81

                         90       100
                 ....*....|....*....|..
gi 719730435  82 HFDNQF---------GFGFTFR 94
Cdd:PRK14288  82 DFSDFFedlgsffedAFGFGAR 103
PRK14295 PRK14295
molecular chaperone DnaJ;
3-66 1.86e-21

molecular chaperone DnaJ;


Pssm-ID: 237665 [Multi-domain]  Cd Length: 389  Bit Score: 91.45  E-value: 1.86e-21
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 719730435   3 DYYEVLGVQKHASPEDIKKAYRKLALKWHPDKNPDNKeEAERQFKQVAEAYEVLSDAKKRDIYD 66
Cdd:PRK14295  10 DYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDA-KAEERFKEISEAYDVLSDEKKRKEYD 72
PRK14287 PRK14287
chaperone protein DnaJ; Provisional
 3-106 2.74e-20

chaperone protein DnaJ; Provisional


Pssm-ID: 237659 [Multi-domain]  Cd Length: 371  Bit Score: 88.14  E-value: 2.74e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 719730435   3 DYYEVLGVQKHASPEDIKKAYRKLALKWHPDKNpdNKEEAERQFKQVAEAYEVLSDAKKRDIYDKYGkeglmngggggsH 82
Cdd:PRK14287   5 DYYEVLGVDRNASVDEVKKAYRKLARKYHPDVN--KAPDAEDKFKEVKEAYDTLSDPQKKAHYDQFG------------H 70

                         90       100
                 ....*....|....*....|....*...
gi 719730435  83 FDNQFGFGFT----FRNPEDVFREFFGG 106
Cdd:PRK14287  71 TDPNQGFGGGgagdFGGFSDIFDMFFGG 98
PRK14300 PRK14300
chaperone protein DnaJ; Provisional
 3-104 6.65e-19

chaperone protein DnaJ; Provisional


Pssm-ID: 172788 [Multi-domain]  Cd Length: 372  Bit Score: 84.30  E-value: 6.65e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 719730435   3 DYYEVLGVQKHASPEDIKKAYRKLALKWHPDKNpdNKEEAERQFKQVAEAYEVLSDAKKRDIYDKYGKEGLMNGGGGGSH 82
Cdd:PRK14300   4 DYYQILGVSKTASQADLKKAYLKLAKQYHPDTT--DAKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQNQQSRGGG 81

                         90       100
                 ....*....|....*....|..
gi 719730435  83 fDNQFGFGftfRNPEDVFREFF 104
Cdd:PRK14300  82 -GNHGGFH---PDINDIFGDFF 99
PRK10266 PRK10266
curved DNA-binding protein;
3-105 1.71e-18

curved DNA-binding protein;


Pssm-ID: 182347 [Multi-domain]  Cd Length: 306  Bit Score: 82.56  E-value: 1.71e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 719730435   3 DYYEVLGVQKHASPEDIKKAYRKLALKWHPD--KNPDnkeeAERQFKQVAEAYEVLSDAKKRDIYDKYGKEglMNGGGGG 80
Cdd:PRK10266   5 DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDvsKEPD----AEARFKEVAEAWEVLSDEQRRAEYDQLWQH--RNDPQFN 78

                         90       100
                 ....*....|....*....|....*
gi 719730435  81 SHFDNQFGFGFTFRNPEDVFREFFG 105
Cdd:PRK10266  79 RQFQHGDGQSFNAEDFDDIFSSIFG 103
PRK14296 PRK14296
chaperone protein DnaJ; Provisional
 3-100 2.36e-18

chaperone protein DnaJ; Provisional


Pssm-ID: 237666 [Multi-domain]  Cd Length: 372  Bit Score: 82.69  E-value: 2.36e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 719730435   3 DYYEVLGVQKHASPEDIKKAYRKLALKWHPDKNpdNKEEAERQFKQVAEAYEVLSDAKKRDIYDKYGKEGlmngggggsh 82
Cdd:PRK14296   5 DYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLN--KSPDAHDKMVEINEAADVLLDKDKRKQYDQFGHAA---------- 72

                         90
                 ....*....|....*...
gi 719730435  83 FDNQFGFGFTFRNPEDVF 100
Cdd:PRK14296  73 FDGSSGFSSNFGDFEDLF 90
DjlA COG1076
DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];
1-64 3.02e-15

DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440694 [Multi-domain]  Cd Length: 75  Bit Score: 68.28  E-value: 3.02e-15
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 719730435   1 MVDYYEVLGVQKHASPEDIKKAYRKLALKWHPDK-----NPDNKEEAERQFKQVAEAYEVLSDAKKRDI 64
Cdd:COG1076    3 LDDAFELLGLPPDADDAELKRAYRKLQREHHPDRlaaglPEEEQRLALQKAAAINEAYETLKDPRGIDL 71
PTZ00341 PTZ00341
Ring-infected erythrocyte surface antigen; Provisional
 4-73 4.32e-12

Ring-infected erythrocyte surface antigen; Provisional


Pssm-ID: 173534 [Multi-domain]  Cd Length: 1136  Bit Score: 65.19  E-value: 4.32e-12
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 719730435    4 YYEVLGVQKHASPEDIKKAYRKLALKWHPDKNPDNkeEAERQFKQVAEAYEVLSDAKKRDIYDKYGKEGL 73
Cdd:PTZ00341  575 FYDILGVGVNADMKEISERYFKLAENYYPPKRSGN--EGFHKFKKINEAYQILGDIDKKKMYNKFGYDGI 642
ZUO1 COG5269
Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / ...
 2-66 2.50e-08

Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227594 [Multi-domain]  Cd Length: 379  Bit Score: 53.50  E-value: 2.50e-08
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 719730435   2 VDYYEVLGVQKH---ASPEDIKKAYRKLALKWHPDKNPDNKEEAERQ-FKQVAEAYEVLSDAKKRDIYD 66
Cdd:COG5269   43 VDLYALLGLSKYrtkAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEfFKLIQKAREVLGDRKLRLQYD 111
djlA PRK09430
co-chaperone DjlA;
3-61 3.31e-06

co-chaperone DjlA;


Pssm-ID: 236512 [Multi-domain]  Cd Length: 267  Bit Score: 46.73  E-value: 3.31e-06
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 719730435   3 DYYEVLGVQKHASPEDIKKAYRKLALKWHPDK------NPDNKEEAERQFKQVAEAYEVLSDAKK 61
Cdd:PRK09430 201 DAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKlvakglPPEMMEMAKEKAQEIQAAYELIKKQKG 265
hscB PRK01356
co-chaperone HscB; Provisional
 1-65 7.81e-05

co-chaperone HscB; Provisional


Pssm-ID: 167217 [Multi-domain]  Cd Length: 166  Bit Score: 41.79  E-value: 7.81e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 719730435   1 MVDYYEVLGVQKHASP--EDIKKAYRKLALKWHPDKnPDNKEEAERQFKQVAE---AYEVLSDAKKRDIY 65
Cdd:PRK01356   1 MQNYFQLLGLPQEYNIdlKILEKQYFAMQVKYHPDK-AKTLQEKEQNLIIASElnnAYSTLKDALKRAEY 69
PHA03102 PHA03102
Small T antigen; Reviewed
 6-34 4.69e-03

Small T antigen; Reviewed


Pssm-ID: 222986 [Multi-domain]  Cd Length: 153  Bit Score: 36.57  E-value: 4.69e-03
                         10        20        30
                 ....*....|....*....|....*....|.
gi 719730435   6 EVLGVQKHA--SPEDIKKAYRKLALKWHPDK 34
Cdd:PHA03102   9 DLLGLPRSAwgNLPLMRKAYLRKCLEFHPDK 39
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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