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Concise Results
Standard Results
Full Results
PREDICTED: chondroitin sulfate proteoglycan 4, partial [Buceros rhinoceros silvestris]
Protein Classification
LamG and Cadherin_3 domain-containing protein ( domain architecture ID 12032839 )
LamG and Cadherin_3 domain-containing protein
List of domain hits
Name
Accession
Description
Interval
E-value
Cadherin_3
pfam16184 Cadherin-like;
512-623
5.77e-27
Cadherin-like;
Pssm-ID: 465048 [Multi-domain]
Cd Length: 111
Bit Score: 106.53
E-value: 5.77e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704176637 512 QGQMYLLP I M I N P I ND APQ V IFPHGN h MTMLKHTRKHL T T D I LQ VL D D DT SCD DL EFQLHG G QQ me E G YVEYDFH PG V P I 591
Cdd:pfam16184 1 RSVPFTFN I T I I P V ND EAP V LTTNTG - LRLWEGSSRPI T P D L LQ AE D P DT PPE DL TYTVVQ G PS -- H G HLALKGA PG L P V 77
90 100 110
....*....|....*....|....*....|....
gi 704176637 592 EE F SCR D LEA G N VVYVH Q -- SG T NLQL T L QV S DG 623
Cdd:pfam16184 78 TN F TQA D IDS G L VVYVH D gs ES T SDGF T F QV T DG 111
Cadherin_3
pfam16184 Cadherin-like;
980-1087
9.14e-20
Cadherin-like;
Pssm-ID: 465048 [Multi-domain]
Cd Length: 111
Bit Score: 86.12
E-value: 9.14e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704176637 980 V RGV F RVS I Q PVND HV PV QVV N KVFNVVRNGQHLL T T D DIAFT D K D SGFS D VQLVLAR k DILF G SIVSVDDRSHQ V YR FT 1059
Cdd:pfam16184 3 V PFT F NIT I I PVND EA PV LTT N TGLRLWEGSSRPI T P D LLQAE D P D TPPE D LTYTVVQ - GPSH G HLALKGAPGLP V TN FT 81
90 100 110
....*....|....*....|....*....|
gi 704176637 1060 Q D D LRKRKILF VH S G AD -- RGWIQL QV S DG 1087
Cdd:pfam16184 82 Q A D IDSGLVVY VH D G SE st SDGFTF QV T DG 111
LamG
cd00110 Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have ...
175-334
1.02e-17
Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of purposes including signal transduction via cell-surface steroid receptors, adhesion, migration and differentiation through mediation of cell adhesion molecules.
Pssm-ID: 238058 [Multi-domain]
Cd Length: 151
Bit Score: 81.70
E-value: 1.02e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704176637 175 PFG F L G P h SY IAF PT WD A - R EEAT I E F VIT T SITQAP L I Y QAGLE - N DF FY LE ISN GRL RGFVEK G N G II VL HNNVFIS D 252
Cdd:cd00110 1 GVS F S G S - SY VRL PT LP A p R TRLS I S F SFR T TSPNGL L L Y AGSQN g G DF LA LE LED GRL VLRYDL G S G SL VL SSKTPLN D 79
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704176637 253 E Q Q H Y V K V YTDIHKFEILI D YYAS - STSNR G INNY L D L Q G N L FI GG MN E KALQRLRE hhlaftsvwtm TNHS FVGC LE DL 331
Cdd:cd00110 80 G Q W H S V S V ERNGRSVTLSV D GERV v ESGSP G GSAL L N L D G P L YL GG LP E DLKSPGLP ----------- VSPG FVGC IR DL 148
...
gi 704176637 332 RI N 334
Cdd:cd00110 149 KV N 151
Laminin_G_2
pfam02210 Laminin G domain; This family includes the Thrombospondin N-terminal-like domain, a Laminin G ...
27-141
5.16e-15
Laminin G domain; This family includes the Thrombospondin N-terminal-like domain, a Laminin G subfamily.
Pssm-ID: 460494 [Multi-domain]
Cd Length: 126
Bit Score: 72.84
E-value: 5.16e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704176637 27 T S Q G NGLL FL A A ------- AL SMS -- S L QA R LQ LGS EQVT L Q S PAE l Q LND LAV H D V ELLVEDGRMM L TI D SLFNS S VDI 97
Cdd:pfam02210 3 T R Q P NGLL LY A G gggsdfl AL ELV ng R L VL R YD LGS GPES L L S SGK - N LND GQW H S V RVERNGNTLT L SV D GQTVV S SLP 81
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 704176637 98 T G PVRE L DIQYG L FA GG ** PL P L PYLTE V SPP F R GC LHL V TF NG 141
Cdd:pfam02210 82 P G ESLL L NLNGP L YL GG LP PL L L LPALP V RAG F V GC IRD V RV NG 125
Cadherin_3 super family
cl28802 Cadherin-like;
1106-1192
5.92e-14
Cadherin-like;
pfam16184 :Pssm-ID: 465048 [Multi-domain]
Cd Length: 111
Bit Score: 69.55
E-value: 5.92e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704176637 1106 IVN NTGL VIHQ GS RGS I DSSV L SL E tnm D IRS - D E EIRFLITPP P QW G TV - L R G -- EQ PV MA F S Q R D LLA G EIS Y H H N GS 1181
Cdd:pfam16184 21 LTT NTGL RLWE GS SRP I TPDL L QA E --- D PDT p P E DLTYTVVQG P SH G HL a L K G ap GL PV TN F T Q A D IDS G LVV Y V H D GS 97
90
....*....|.
gi 704176637 1182 RH T R D ELQ F T V 1192
Cdd:pfam16184 98 ES T S D GFT F Q V 108
Cadherin_3 super family
cl28802 Cadherin-like;
1218-1315
2.77e-13
Cadherin-like;
pfam16184 :Pssm-ID: 465048 [Multi-domain]
Cd Length: 111
Bit Score: 67.63
E-value: 2.77e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704176637 1218 L VNHKEIHVFQ G EAAG I KEEY L LVTHEEI P SQ D II Y L V SRP PS S G F LA M lqhgqds NEQ P S L d P IQS FTQ D DI NN G R V L Y 1297
Cdd:pfam16184 21 L TTNTGLRLWE G SSRP I TPDL L QAEDPDT P PE D LT Y T V VQG PS H G H LA L ------- KGA P G L - P VTN FTQ A DI DS G L V V Y 92
90
....*....|....*...
gi 704176637 1298 L H S k LE E AQR D Q F VVDI T 1315
Cdd:pfam16184 93 V H D - GS E STS D G F TFQV T 109
Cadherin_3 super family
cl28802 Cadherin-like;
858-965
3.79e-11
Cadherin-like;
pfam16184 :Pssm-ID: 465048 [Multi-domain]
Cd Length: 111
Bit Score: 61.46
E-value: 3.79e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704176637 858 H S PVY T YT I S I GG - DPD AP A LT - N VL L TVP EG GQAV I SK D H L fvqsm NSM D Y ------- L Y E V IE GP A HG R LA WAASH G w 928
Cdd:pfam16184 1 R S VPF T FN I T I IP v NDE AP V LT t N TG L RLW EG SSRP I TP D L L ----- QAE D P dtppedl T Y T V VQ GP S HG H LA LKGAP G - 74
90 100 110
....*....|....*....|....*....|....*..
gi 704176637 929 asr EEI T E FT ND DI LHRRLL Y Q HD D SE TLE D DIP F VA 965
Cdd:pfam16184 75 --- LPV T N FT QA DI DSGLVV Y V HD G SE STS D GFT F QV 108
Cadherin_3 super family
cl28802 Cadherin-like;
412-499
1.35e-10
Cadherin-like;
pfam16184 :Pssm-ID: 465048 [Multi-domain]
Cd Length: 111
Bit Score: 59.92
E-value: 1.35e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704176637 412 P L IVS EG GTAYLEWRHA Q p TV D L - SLA nirq SQILFSITND P R HG Q L E L DIPGSRSRRK FT LL DI VNRK V R YVHDGSE GP 490
Cdd:pfam16184 26 G L RLW EG SSRPITPDLL Q - AE D P d TPP ---- EDLTYTVVQG P S HG H L A L KGAPGLPVTN FT QA DI DSGL V V YVHDGSE ST 100
....*....
gi 704176637 491 M D QLMLE VT 499
Cdd:pfam16184 101 S D GFTFQ VT 109
Cadherin_3 super family
cl28802 Cadherin-like;
643-718
2.12e-08
Cadherin-like;
pfam16184 :Pssm-ID: 465048 [Multi-domain]
Cd Length: 111
Bit Score: 53.38
E-value: 2.12e-08
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 704176637 643 L RN NTGL SISQ G EAAR IT TAN L SV E -- TNAV E Q rva IL Y VLTGPLRY G EVQKQ G SM gge WKK V ES F H Q Q D LEQ G RIQ Y 718
Cdd:pfam16184 21 L TT NTGL RLWE G SSRP IT PDL L QA E dp DTPP E D --- LT Y TVVQGPSH G HLALK G AP --- GLP V TN F T Q A D IDS G LVV Y 92
Cadherin_3 super family
cl28802 Cadherin-like;
777-852
6.41e-07
Cadherin-like;
pfam16184 :Pssm-ID: 465048 [Multi-domain]
Cd Length: 111
Bit Score: 49.52
E-value: 6.41e-07
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 704176637 777 IT SKE L E A ml EDP NSA P VPFH Y MII Q A P KK G N L E L L G NRLTEGFG FTQ D D LQRNHLS Y SATIRN S Q qa E D T F Q F R V 852
Cdd:pfam16184 37 IT PDL L Q A -- EDP DTP P EDLT Y TVV Q G P SH G H L A L K G APGLPVTN FTQ A D IDSGLVV Y VHDGSE S T -- S D G F T F Q V 108
Cadherin_3 super family
cl28802 Cadherin-like;
1330-1426
8.38e-03
Cadherin-like;
pfam16184 :Pssm-ID: 465048 [Multi-domain]
Cd Length: 111
Bit Score: 37.58
E-value: 8.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704176637 1330 VVLP ITI - P LD ------ VR N -- ITVPG G G S AILSTGV L NIPNAYYTALGVEFR V LKP P RF G T L LNSER P ED d ELHG FT WS 1400
Cdd:pfam16184 5 FTFN ITI i P VN deapvl TT N tg LRLWE G S S RPITPDL L QAEDPDTPPEDLTYT V VQG P SH G H L ALKGA P GL - PVTN FT QA 83
90 100
....*....|....*....|....*.
gi 704176637 1401 EVEKQQIR Y RQ D TPRAQA D S FT LLAN 1426
Cdd:pfam16184 84 DIDSGLVV Y VH D GSESTS D G FT FQVT 109
Name
Accession
Description
Interval
E-value
Cadherin_3
pfam16184 Cadherin-like;
512-623
5.77e-27
Cadherin-like;
Pssm-ID: 465048 [Multi-domain]
Cd Length: 111
Bit Score: 106.53
E-value: 5.77e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704176637 512 QGQMYLLP I M I N P I ND APQ V IFPHGN h MTMLKHTRKHL T T D I LQ VL D D DT SCD DL EFQLHG G QQ me E G YVEYDFH PG V P I 591
Cdd:pfam16184 1 RSVPFTFN I T I I P V ND EAP V LTTNTG - LRLWEGSSRPI T P D L LQ AE D P DT PPE DL TYTVVQ G PS -- H G HLALKGA PG L P V 77
90 100 110
....*....|....*....|....*....|....
gi 704176637 592 EE F SCR D LEA G N VVYVH Q -- SG T NLQL T L QV S DG 623
Cdd:pfam16184 78 TN F TQA D IDS G L VVYVH D gs ES T SDGF T F QV T DG 111
Cadherin_3
pfam16184 Cadherin-like;
980-1087
9.14e-20
Cadherin-like;
Pssm-ID: 465048 [Multi-domain]
Cd Length: 111
Bit Score: 86.12
E-value: 9.14e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704176637 980 V RGV F RVS I Q PVND HV PV QVV N KVFNVVRNGQHLL T T D DIAFT D K D SGFS D VQLVLAR k DILF G SIVSVDDRSHQ V YR FT 1059
Cdd:pfam16184 3 V PFT F NIT I I PVND EA PV LTT N TGLRLWEGSSRPI T P D LLQAE D P D TPPE D LTYTVVQ - GPSH G HLALKGAPGLP V TN FT 81
90 100 110
....*....|....*....|....*....|
gi 704176637 1060 Q D D LRKRKILF VH S G AD -- RGWIQL QV S DG 1087
Cdd:pfam16184 82 Q A D IDSGLVVY VH D G SE st SDGFTF QV T DG 111
LamG
cd00110 Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have ...
175-334
1.02e-17
Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of purposes including signal transduction via cell-surface steroid receptors, adhesion, migration and differentiation through mediation of cell adhesion molecules.
Pssm-ID: 238058 [Multi-domain]
Cd Length: 151
Bit Score: 81.70
E-value: 1.02e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704176637 175 PFG F L G P h SY IAF PT WD A - R EEAT I E F VIT T SITQAP L I Y QAGLE - N DF FY LE ISN GRL RGFVEK G N G II VL HNNVFIS D 252
Cdd:cd00110 1 GVS F S G S - SY VRL PT LP A p R TRLS I S F SFR T TSPNGL L L Y AGSQN g G DF LA LE LED GRL VLRYDL G S G SL VL SSKTPLN D 79
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704176637 253 E Q Q H Y V K V YTDIHKFEILI D YYAS - STSNR G INNY L D L Q G N L FI GG MN E KALQRLRE hhlaftsvwtm TNHS FVGC LE DL 331
Cdd:cd00110 80 G Q W H S V S V ERNGRSVTLSV D GERV v ESGSP G GSAL L N L D G P L YL GG LP E DLKSPGLP ----------- VSPG FVGC IR DL 148
...
gi 704176637 332 RI N 334
Cdd:cd00110 149 KV N 151
Laminin_G_2
pfam02210 Laminin G domain; This family includes the Thrombospondin N-terminal-like domain, a Laminin G ...
27-141
5.16e-15
Laminin G domain; This family includes the Thrombospondin N-terminal-like domain, a Laminin G subfamily.
Pssm-ID: 460494 [Multi-domain]
Cd Length: 126
Bit Score: 72.84
E-value: 5.16e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704176637 27 T S Q G NGLL FL A A ------- AL SMS -- S L QA R LQ LGS EQVT L Q S PAE l Q LND LAV H D V ELLVEDGRMM L TI D SLFNS S VDI 97
Cdd:pfam02210 3 T R Q P NGLL LY A G gggsdfl AL ELV ng R L VL R YD LGS GPES L L S SGK - N LND GQW H S V RVERNGNTLT L SV D GQTVV S SLP 81
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 704176637 98 T G PVRE L DIQYG L FA GG ** PL P L PYLTE V SPP F R GC LHL V TF NG 141
Cdd:pfam02210 82 P G ESLL L NLNGP L YL GG LP PL L L LPALP V RAG F V GC IRD V RV NG 125
LamG
smart00282 Laminin G domain;
197-336
2.85e-14
Laminin G domain;
Pssm-ID: 214598 [Multi-domain]
Cd Length: 132
Bit Score: 71.22
E-value: 2.85e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704176637 197 T I E F VIT T SITQAP L I Y QAGLE - N D FFY LE ISN GRL RGFVEK G N G - IIVLHNNVFIS D E Q Q H Y V K V YTDIHKFEILI D YY 274
Cdd:smart00282 1 S I S F SFR T TSPNGL L L Y AGSKG g G D YLA LE LRD GRL VLRYDL G S G p ARLTSDPTPLN D G Q W H R V A V ERNGRSVTLSV D GG 80
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 704176637 275 AS - S TSNR G INNY L D L Q G N L FI GG MN E KALQRL rehhlaftsvw TMTNHS F V GC LED L RI N KQ 336
Cdd:smart00282 81 NR v S GESP G GLTI L N L D G P L YL GG LP E DLKLPP ----------- LPVTPG F R GC IRN L KV N GK 132
LamG
cd00110 Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have ...
1-140
3.99e-14
Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of purposes including signal transduction via cell-surface steroid receptors, adhesion, migration and differentiation through mediation of cell adhesion molecules.
Pssm-ID: 238058 [Multi-domain]
Cd Length: 151
Bit Score: 71.30
E-value: 3.99e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704176637 1 SF F G DG YV EM P LAD A S RT - VRLRLQLY T SQG NGLL ---------- FLA AA L SMSS L QA R LQ LGS EQVT L Q S PA el Q LND L 69
Cdd:cd00110 3 SF S G SS YV RL P TLP A P RT r LSISFSFR T TSP NGLL lyagsqnggd FLA LE L EDGR L VL R YD LGS GSLV L S S KT -- P LND G 80
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 704176637 70 AV H D V ELLVEDGRMM L TI D S lf NSS V DITG P -- VRE L DIQYG L FA GG **PLPLPYLTE VSP P F R GC LHLVTF N 140
Cdd:cd00110 81 QW H S V SVERNGRSVT L SV D G -- ERV V ESGS P gg SAL L NLDGP L YL GG LPEDLKSPGLP VSP G F V GC IRDLKV N 151
Cadherin_3
pfam16184 Cadherin-like;
1106-1192
5.92e-14
Cadherin-like;
Pssm-ID: 465048 [Multi-domain]
Cd Length: 111
Bit Score: 69.55
E-value: 5.92e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704176637 1106 IVN NTGL VIHQ GS RGS I DSSV L SL E tnm D IRS - D E EIRFLITPP P QW G TV - L R G -- EQ PV MA F S Q R D LLA G EIS Y H H N GS 1181
Cdd:pfam16184 21 LTT NTGL RLWE GS SRP I TPDL L QA E --- D PDT p P E DLTYTVVQG P SH G HL a L K G ap GL PV TN F T Q A D IDS G LVV Y V H D GS 97
90
....*....|.
gi 704176637 1182 RH T R D ELQ F T V 1192
Cdd:pfam16184 98 ES T S D GFT F Q V 108
Laminin_G_2
pfam02210 Laminin G domain; This family includes the Thrombospondin N-terminal-like domain, a Laminin G ...
204-336
6.80e-14
Laminin G domain; This family includes the Thrombospondin N-terminal-like domain, a Laminin G subfamily.
Pssm-ID: 460494 [Multi-domain]
Cd Length: 126
Bit Score: 69.76
E-value: 6.80e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704176637 204 T SITQAP L I Y QA G LEN DF FY LE IS NGRL RGFVEK G N G IIV L H - NNVFIS D E Q Q H Y V K V YTDIHKFEILI D YYASST S NRG 282
Cdd:pfam02210 3 T RQPNGL L L Y AG G GGS DF LA LE LV NGRL VLRYDL G S G PES L L s SGKNLN D G Q W H S V R V ERNGNTLTLSV D GQTVVS S LPP 82
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 704176637 283 INNY - L D L Q G N L FI GG MNEKA L QRLRE hhlaftsvwtm TNHS FVGC LE D L R I N KQ 336
Cdd:pfam02210 83 GESL l L N L N G P L YL GG LPPLL L LPALP ----------- VRAG FVGC IR D V R V N GE 126
Cadherin_3
pfam16184 Cadherin-like;
1218-1315
2.77e-13
Cadherin-like;
Pssm-ID: 465048 [Multi-domain]
Cd Length: 111
Bit Score: 67.63
E-value: 2.77e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704176637 1218 L VNHKEIHVFQ G EAAG I KEEY L LVTHEEI P SQ D II Y L V SRP PS S G F LA M lqhgqds NEQ P S L d P IQS FTQ D DI NN G R V L Y 1297
Cdd:pfam16184 21 L TTNTGLRLWE G SSRP I TPDL L QAEDPDT P PE D LT Y T V VQG PS H G H LA L ------- KGA P G L - P VTN FTQ A DI DS G L V V Y 92
90
....*....|....*...
gi 704176637 1298 L H S k LE E AQR D Q F VVDI T 1315
Cdd:pfam16184 93 V H D - GS E STS D G F TFQV T 109
LamG
smart00282 Laminin G domain;
25-141
8.52e-13
Laminin G domain;
Pssm-ID: 214598 [Multi-domain]
Cd Length: 132
Bit Score: 66.98
E-value: 8.52e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704176637 25 LY TSQGN G LLF LA AA L SMSS L QA R LQ LGS EQVT L Q S PAE l Q LND LAV H D V ELLVEDGRMM L TI D SLFNS S VDIT G PVRE L 104
Cdd:smart00282 16 LY AGSKG G GDY LA LE L RDGR L VL R YD LGS GPAR L T S DPT - P LND GQW H R V AVERNGRSVT L SV D GGNRV S GESP G GLTI L 94
90 100 110
....*....|....*....|....*....|....*..
gi 704176637 105 DIQYG L FA GG **PLPLPYLTE V S P P FRGC LHLVTF NG 141
Cdd:smart00282 95 NLDGP L YL GG LPEDLKLPPLP V T P G FRGC IRNLKV NG 131
Cadherin_3
pfam16184 Cadherin-like;
858-965
3.79e-11
Cadherin-like;
Pssm-ID: 465048 [Multi-domain]
Cd Length: 111
Bit Score: 61.46
E-value: 3.79e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704176637 858 H S PVY T YT I S I GG - DPD AP A LT - N VL L TVP EG GQAV I SK D H L fvqsm NSM D Y ------- L Y E V IE GP A HG R LA WAASH G w 928
Cdd:pfam16184 1 R S VPF T FN I T I IP v NDE AP V LT t N TG L RLW EG SSRP I TP D L L ----- QAE D P dtppedl T Y T V VQ GP S HG H LA LKGAP G - 74
90 100 110
....*....|....*....|....*....|....*..
gi 704176637 929 asr EEI T E FT ND DI LHRRLL Y Q HD D SE TLE D DIP F VA 965
Cdd:pfam16184 75 --- LPV T N FT QA DI DSGLVV Y V HD G SE STS D GFT F QV 108
Cadherin_3
pfam16184 Cadherin-like;
412-499
1.35e-10
Cadherin-like;
Pssm-ID: 465048 [Multi-domain]
Cd Length: 111
Bit Score: 59.92
E-value: 1.35e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704176637 412 P L IVS EG GTAYLEWRHA Q p TV D L - SLA nirq SQILFSITND P R HG Q L E L DIPGSRSRRK FT LL DI VNRK V R YVHDGSE GP 490
Cdd:pfam16184 26 G L RLW EG SSRPITPDLL Q - AE D P d TPP ---- EDLTYTVVQG P S HG H L A L KGAPGLPVTN FT QA DI DSGL V V YVHDGSE ST 100
....*....
gi 704176637 491 M D QLMLE VT 499
Cdd:pfam16184 101 S D GFTFQ VT 109
Cadherin_3
pfam16184 Cadherin-like;
643-718
2.12e-08
Cadherin-like;
Pssm-ID: 465048 [Multi-domain]
Cd Length: 111
Bit Score: 53.38
E-value: 2.12e-08
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 704176637 643 L RN NTGL SISQ G EAAR IT TAN L SV E -- TNAV E Q rva IL Y VLTGPLRY G EVQKQ G SM gge WKK V ES F H Q Q D LEQ G RIQ Y 718
Cdd:pfam16184 21 L TT NTGL RLWE G SSRP IT PDL L QA E dp DTPP E D --- LT Y TVVQGPSH G HLALK G AP --- GLP V TN F T Q A D IDS G LVV Y 92
Cadherin_3
pfam16184 Cadherin-like;
777-852
6.41e-07
Cadherin-like;
Pssm-ID: 465048 [Multi-domain]
Cd Length: 111
Bit Score: 49.52
E-value: 6.41e-07
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 704176637 777 IT SKE L E A ml EDP NSA P VPFH Y MII Q A P KK G N L E L L G NRLTEGFG FTQ D D LQRNHLS Y SATIRN S Q qa E D T F Q F R V 852
Cdd:pfam16184 37 IT PDL L Q A -- EDP DTP P EDLT Y TVV Q G P SH G H L A L K G APGLPVTN FTQ A D IDSGLVV Y VHDGSE S T -- S D G F T F Q V 108
Cadherin_3
pfam16184 Cadherin-like;
1330-1426
8.38e-03
Cadherin-like;
Pssm-ID: 465048 [Multi-domain]
Cd Length: 111
Bit Score: 37.58
E-value: 8.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704176637 1330 VVLP ITI - P LD ------ VR N -- ITVPG G G S AILSTGV L NIPNAYYTALGVEFR V LKP P RF G T L LNSER P ED d ELHG FT WS 1400
Cdd:pfam16184 5 FTFN ITI i P VN deapvl TT N tg LRLWE G S S RPITPDL L QAEDPDTPPEDLTYT V VQG P SH G H L ALKGA P GL - PVTN FT QA 83
90 100
....*....|....*....|....*.
gi 704176637 1401 EVEKQQIR Y RQ D TPRAQA D S FT LLAN 1426
Cdd:pfam16184 84 DIDSGLVV Y VH D GSESTS D G FT FQVT 109
Name
Accession
Description
Interval
E-value
Cadherin_3
pfam16184 Cadherin-like;
512-623
5.77e-27
Cadherin-like;
Pssm-ID: 465048 [Multi-domain]
Cd Length: 111
Bit Score: 106.53
E-value: 5.77e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704176637 512 QGQMYLLP I M I N P I ND APQ V IFPHGN h MTMLKHTRKHL T T D I LQ VL D D DT SCD DL EFQLHG G QQ me E G YVEYDFH PG V P I 591
Cdd:pfam16184 1 RSVPFTFN I T I I P V ND EAP V LTTNTG - LRLWEGSSRPI T P D L LQ AE D P DT PPE DL TYTVVQ G PS -- H G HLALKGA PG L P V 77
90 100 110
....*....|....*....|....*....|....
gi 704176637 592 EE F SCR D LEA G N VVYVH Q -- SG T NLQL T L QV S DG 623
Cdd:pfam16184 78 TN F TQA D IDS G L VVYVH D gs ES T SDGF T F QV T DG 111
Cadherin_3
pfam16184 Cadherin-like;
980-1087
9.14e-20
Cadherin-like;
Pssm-ID: 465048 [Multi-domain]
Cd Length: 111
Bit Score: 86.12
E-value: 9.14e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704176637 980 V RGV F RVS I Q PVND HV PV QVV N KVFNVVRNGQHLL T T D DIAFT D K D SGFS D VQLVLAR k DILF G SIVSVDDRSHQ V YR FT 1059
Cdd:pfam16184 3 V PFT F NIT I I PVND EA PV LTT N TGLRLWEGSSRPI T P D LLQAE D P D TPPE D LTYTVVQ - GPSH G HLALKGAPGLP V TN FT 81
90 100 110
....*....|....*....|....*....|
gi 704176637 1060 Q D D LRKRKILF VH S G AD -- RGWIQL QV S DG 1087
Cdd:pfam16184 82 Q A D IDSGLVVY VH D G SE st SDGFTF QV T DG 111
LamG
cd00110 Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have ...
175-334
1.02e-17
Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of purposes including signal transduction via cell-surface steroid receptors, adhesion, migration and differentiation through mediation of cell adhesion molecules.
Pssm-ID: 238058 [Multi-domain]
Cd Length: 151
Bit Score: 81.70
E-value: 1.02e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704176637 175 PFG F L G P h SY IAF PT WD A - R EEAT I E F VIT T SITQAP L I Y QAGLE - N DF FY LE ISN GRL RGFVEK G N G II VL HNNVFIS D 252
Cdd:cd00110 1 GVS F S G S - SY VRL PT LP A p R TRLS I S F SFR T TSPNGL L L Y AGSQN g G DF LA LE LED GRL VLRYDL G S G SL VL SSKTPLN D 79
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704176637 253 E Q Q H Y V K V YTDIHKFEILI D YYAS - STSNR G INNY L D L Q G N L FI GG MN E KALQRLRE hhlaftsvwtm TNHS FVGC LE DL 331
Cdd:cd00110 80 G Q W H S V S V ERNGRSVTLSV D GERV v ESGSP G GSAL L N L D G P L YL GG LP E DLKSPGLP ----------- VSPG FVGC IR DL 148
...
gi 704176637 332 RI N 334
Cdd:cd00110 149 KV N 151
Laminin_G_2
pfam02210 Laminin G domain; This family includes the Thrombospondin N-terminal-like domain, a Laminin G ...
27-141
5.16e-15
Laminin G domain; This family includes the Thrombospondin N-terminal-like domain, a Laminin G subfamily.
Pssm-ID: 460494 [Multi-domain]
Cd Length: 126
Bit Score: 72.84
E-value: 5.16e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704176637 27 T S Q G NGLL FL A A ------- AL SMS -- S L QA R LQ LGS EQVT L Q S PAE l Q LND LAV H D V ELLVEDGRMM L TI D SLFNS S VDI 97
Cdd:pfam02210 3 T R Q P NGLL LY A G gggsdfl AL ELV ng R L VL R YD LGS GPES L L S SGK - N LND GQW H S V RVERNGNTLT L SV D GQTVV S SLP 81
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 704176637 98 T G PVRE L DIQYG L FA GG ** PL P L PYLTE V SPP F R GC LHL V TF NG 141
Cdd:pfam02210 82 P G ESLL L NLNGP L YL GG LP PL L L LPALP V RAG F V GC IRD V RV NG 125
LamG
smart00282 Laminin G domain;
197-336
2.85e-14
Laminin G domain;
Pssm-ID: 214598 [Multi-domain]
Cd Length: 132
Bit Score: 71.22
E-value: 2.85e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704176637 197 T I E F VIT T SITQAP L I Y QAGLE - N D FFY LE ISN GRL RGFVEK G N G - IIVLHNNVFIS D E Q Q H Y V K V YTDIHKFEILI D YY 274
Cdd:smart00282 1 S I S F SFR T TSPNGL L L Y AGSKG g G D YLA LE LRD GRL VLRYDL G S G p ARLTSDPTPLN D G Q W H R V A V ERNGRSVTLSV D GG 80
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 704176637 275 AS - S TSNR G INNY L D L Q G N L FI GG MN E KALQRL rehhlaftsvw TMTNHS F V GC LED L RI N KQ 336
Cdd:smart00282 81 NR v S GESP G GLTI L N L D G P L YL GG LP E DLKLPP ----------- LPVTPG F R GC IRN L KV N GK 132
LamG
cd00110 Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have ...
1-140
3.99e-14
Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of purposes including signal transduction via cell-surface steroid receptors, adhesion, migration and differentiation through mediation of cell adhesion molecules.
Pssm-ID: 238058 [Multi-domain]
Cd Length: 151
Bit Score: 71.30
E-value: 3.99e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704176637 1 SF F G DG YV EM P LAD A S RT - VRLRLQLY T SQG NGLL ---------- FLA AA L SMSS L QA R LQ LGS EQVT L Q S PA el Q LND L 69
Cdd:cd00110 3 SF S G SS YV RL P TLP A P RT r LSISFSFR T TSP NGLL lyagsqnggd FLA LE L EDGR L VL R YD LGS GSLV L S S KT -- P LND G 80
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 704176637 70 AV H D V ELLVEDGRMM L TI D S lf NSS V DITG P -- VRE L DIQYG L FA GG **PLPLPYLTE VSP P F R GC LHLVTF N 140
Cdd:cd00110 81 QW H S V SVERNGRSVT L SV D G -- ERV V ESGS P gg SAL L NLDGP L YL GG LPEDLKSPGLP VSP G F V GC IRDLKV N 151
Cadherin_3
pfam16184 Cadherin-like;
1106-1192
5.92e-14
Cadherin-like;
Pssm-ID: 465048 [Multi-domain]
Cd Length: 111
Bit Score: 69.55
E-value: 5.92e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704176637 1106 IVN NTGL VIHQ GS RGS I DSSV L SL E tnm D IRS - D E EIRFLITPP P QW G TV - L R G -- EQ PV MA F S Q R D LLA G EIS Y H H N GS 1181
Cdd:pfam16184 21 LTT NTGL RLWE GS SRP I TPDL L QA E --- D PDT p P E DLTYTVVQG P SH G HL a L K G ap GL PV TN F T Q A D IDS G LVV Y V H D GS 97
90
....*....|.
gi 704176637 1182 RH T R D ELQ F T V 1192
Cdd:pfam16184 98 ES T S D GFT F Q V 108
Laminin_G_2
pfam02210 Laminin G domain; This family includes the Thrombospondin N-terminal-like domain, a Laminin G ...
204-336
6.80e-14
Laminin G domain; This family includes the Thrombospondin N-terminal-like domain, a Laminin G subfamily.
Pssm-ID: 460494 [Multi-domain]
Cd Length: 126
Bit Score: 69.76
E-value: 6.80e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704176637 204 T SITQAP L I Y QA G LEN DF FY LE IS NGRL RGFVEK G N G IIV L H - NNVFIS D E Q Q H Y V K V YTDIHKFEILI D YYASST S NRG 282
Cdd:pfam02210 3 T RQPNGL L L Y AG G GGS DF LA LE LV NGRL VLRYDL G S G PES L L s SGKNLN D G Q W H S V R V ERNGNTLTLSV D GQTVVS S LPP 82
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 704176637 283 INNY - L D L Q G N L FI GG MNEKA L QRLRE hhlaftsvwtm TNHS FVGC LE D L R I N KQ 336
Cdd:pfam02210 83 GESL l L N L N G P L YL GG LPPLL L LPALP ----------- VRAG FVGC IR D V R V N GE 126
Cadherin_3
pfam16184 Cadherin-like;
1218-1315
2.77e-13
Cadherin-like;
Pssm-ID: 465048 [Multi-domain]
Cd Length: 111
Bit Score: 67.63
E-value: 2.77e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704176637 1218 L VNHKEIHVFQ G EAAG I KEEY L LVTHEEI P SQ D II Y L V SRP PS S G F LA M lqhgqds NEQ P S L d P IQS FTQ D DI NN G R V L Y 1297
Cdd:pfam16184 21 L TTNTGLRLWE G SSRP I TPDL L QAEDPDT P PE D LT Y T V VQG PS H G H LA L ------- KGA P G L - P VTN FTQ A DI DS G L V V Y 92
90
....*....|....*...
gi 704176637 1298 L H S k LE E AQR D Q F VVDI T 1315
Cdd:pfam16184 93 V H D - GS E STS D G F TFQV T 109
LamG
smart00282 Laminin G domain;
25-141
8.52e-13
Laminin G domain;
Pssm-ID: 214598 [Multi-domain]
Cd Length: 132
Bit Score: 66.98
E-value: 8.52e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704176637 25 LY TSQGN G LLF LA AA L SMSS L QA R LQ LGS EQVT L Q S PAE l Q LND LAV H D V ELLVEDGRMM L TI D SLFNS S VDIT G PVRE L 104
Cdd:smart00282 16 LY AGSKG G GDY LA LE L RDGR L VL R YD LGS GPAR L T S DPT - P LND GQW H R V AVERNGRSVT L SV D GGNRV S GESP G GLTI L 94
90 100 110
....*....|....*....|....*....|....*..
gi 704176637 105 DIQYG L FA GG **PLPLPYLTE V S P P FRGC LHLVTF NG 141
Cdd:smart00282 95 NLDGP L YL GG LPEDLKLPPLP V T P G FRGC IRNLKV NG 131
Cadherin_3
pfam16184 Cadherin-like;
858-965
3.79e-11
Cadherin-like;
Pssm-ID: 465048 [Multi-domain]
Cd Length: 111
Bit Score: 61.46
E-value: 3.79e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704176637 858 H S PVY T YT I S I GG - DPD AP A LT - N VL L TVP EG GQAV I SK D H L fvqsm NSM D Y ------- L Y E V IE GP A HG R LA WAASH G w 928
Cdd:pfam16184 1 R S VPF T FN I T I IP v NDE AP V LT t N TG L RLW EG SSRP I TP D L L ----- QAE D P dtppedl T Y T V VQ GP S HG H LA LKGAP G - 74
90 100 110
....*....|....*....|....*....|....*..
gi 704176637 929 asr EEI T E FT ND DI LHRRLL Y Q HD D SE TLE D DIP F VA 965
Cdd:pfam16184 75 --- LPV T N FT QA DI DSGLVV Y V HD G SE STS D GFT F QV 108
Cadherin_3
pfam16184 Cadherin-like;
412-499
1.35e-10
Cadherin-like;
Pssm-ID: 465048 [Multi-domain]
Cd Length: 111
Bit Score: 59.92
E-value: 1.35e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704176637 412 P L IVS EG GTAYLEWRHA Q p TV D L - SLA nirq SQILFSITND P R HG Q L E L DIPGSRSRRK FT LL DI VNRK V R YVHDGSE GP 490
Cdd:pfam16184 26 G L RLW EG SSRPITPDLL Q - AE D P d TPP ---- EDLTYTVVQG P S HG H L A L KGAPGLPVTN FT QA DI DSGL V V YVHDGSE ST 100
....*....
gi 704176637 491 M D QLMLE VT 499
Cdd:pfam16184 101 S D GFTFQ VT 109
Cadherin_3
pfam16184 Cadherin-like;
643-718
2.12e-08
Cadherin-like;
Pssm-ID: 465048 [Multi-domain]
Cd Length: 111
Bit Score: 53.38
E-value: 2.12e-08
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 704176637 643 L RN NTGL SISQ G EAAR IT TAN L SV E -- TNAV E Q rva IL Y VLTGPLRY G EVQKQ G SM gge WKK V ES F H Q Q D LEQ G RIQ Y 718
Cdd:pfam16184 21 L TT NTGL RLWE G SSRP IT PDL L QA E dp DTPP E D --- LT Y TVVQGPSH G HLALK G AP --- GLP V TN F T Q A D IDS G LVV Y 92
Laminin_G_1
pfam00054 Laminin G domain;
25-141
3.81e-08
Laminin G domain;
Pssm-ID: 395008 [Multi-domain]
Cd Length: 131
Bit Score: 53.47
E-value: 3.81e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704176637 25 LY TSQGNGLL FLA AA L SMSS L QARLQ LGS EQVTLQ S PAE L ql ND LAV H D VEL LVEDGRMM L TI D SLFNSSV - DIT G PVRE 103
Cdd:pfam00054 11 LY NGTQTERD FLA LE L RDGR L EVSYD LGS GAAVVR S GDK L -- ND GKW H S VEL ERNGRSGT L SV D GEARPTG e SPL G ATTD 88
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 704176637 104 LD IQYG L FA GG **p LP ---- LPYLTEV SP P F R GC LHL V TF NG 141
Cdd:pfam00054 89 LD VDGP L YV GG --- LP slgv KKRRLAI SP S F D GC IRD V IV NG 127
Laminin_G_1
pfam00054 Laminin G domain;
220-336
5.05e-08
Laminin G domain;
Pssm-ID: 395008 [Multi-domain]
Cd Length: 131
Bit Score: 53.09
E-value: 5.05e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704176637 220 DF FY LE ISN GRL RGFVEK G N G II V LHNNVFIS D EQQ H Y V KVYTDIHKFEILI D YY A SS T -- S NR G INNY LD LQ G N L FI GG 297
Cdd:pfam00054 20 DF LA LE LRD GRL EVSYDL G S G AA V VRSGDKLN D GKW H S V ELERNGRSGTLSV D GE A RP T ge S PL G ATTD LD VD G P L YV GG 99
90 100 110
....*....|....*....|....*....|....*....
gi 704176637 298 MNEKALQRL R EHH laftsvwtmt NH SF V GC LE D LRI N KQ 336
Cdd:pfam00054 100 LPSLGVKKR R LAI ---------- SP SF D GC IR D VIV N GK 128
Cadherin_3
pfam16184 Cadherin-like;
777-852
6.41e-07
Cadherin-like;
Pssm-ID: 465048 [Multi-domain]
Cd Length: 111
Bit Score: 49.52
E-value: 6.41e-07
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 704176637 777 IT SKE L E A ml EDP NSA P VPFH Y MII Q A P KK G N L E L L G NRLTEGFG FTQ D D LQRNHLS Y SATIRN S Q qa E D T F Q F R V 852
Cdd:pfam16184 37 IT PDL L Q A -- EDP DTP P EDLT Y TVV Q G P SH G H L A L K G APGLPVTN FTQ A D IDSGLVV Y VHDGSE S T -- S D G F T F Q V 108
Cadherin_3
pfam16184 Cadherin-like;
1330-1426
8.38e-03
Cadherin-like;
Pssm-ID: 465048 [Multi-domain]
Cd Length: 111
Bit Score: 37.58
E-value: 8.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704176637 1330 VVLP ITI - P LD ------ VR N -- ITVPG G G S AILSTGV L NIPNAYYTALGVEFR V LKP P RF G T L LNSER P ED d ELHG FT WS 1400
Cdd:pfam16184 5 FTFN ITI i P VN deapvl TT N tg LRLWE G S S RPITPDL L QAEDPDTPPEDLTYT V VQG P SH G H L ALKGA P GL - PVTN FT QA 83
90 100
....*....|....*....|....*.
gi 704176637 1401 EVEKQQIR Y RQ D TPRAQA D S FT LLAN 1426
Cdd:pfam16184 84 DIDSGLVV Y VH D GSESTS D G FT FQVT 109
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
