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Conserved domains on  [gi|704172664|ref|XP_010132385|]
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PREDICTED: dnaJ homolog subfamily B member 6 [Buceros rhinoceros silvestris]

Protein Classification

molecular chaperone DnaJ( domain architecture ID 1000952)

molecular chaperone DnaJ, part of the DnaK-DnaJ-GrpE system, prevents the aggregation of unfolded substrate and acts primarily by stimulating the ATPase activity of Hsp70

CATH:  2.10.230.10
Gene Ontology:  GO:0051082|GO:0005524|GO:0009408|GO:0006457
PubMed:  8016869|15063739|29290615
SCOP:  4003813|4002149

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK10767 super family cl35946
chaperone protein DnaJ; Provisional
 3-107 3.30e-40

chaperone protein DnaJ; Provisional


The actual alignment was detected with superfamily member PRK10767:

Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 141.82  E-value: 3.30e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704172664   3 DYYEVLGVQKHASAEDIKKAYRKLALKWHPDKNPDNKeEAERQFKQVAEAYEVLSDVKKRDIYDRYGKEGLiNGGGGGNH 82
Cdd:PRK10767   5 DYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDK-EAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAF-EQGGGGGG 82

                         90       100
                 ....*....|....*....|....*
gi 704172664  83 HDNQYGFEFTFrnpEDVFREFFGGR 107
Cdd:PRK10767  83 FGGGGGFGDIF---GDIFGDIFGGG 104
 
Name Accession Description Interval E-value
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 3-107 3.30e-40

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 141.82  E-value: 3.30e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704172664   3 DYYEVLGVQKHASAEDIKKAYRKLALKWHPDKNPDNKeEAERQFKQVAEAYEVLSDVKKRDIYDRYGKEGLiNGGGGGNH 82
Cdd:PRK10767   5 DYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDK-EAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAF-EQGGGGGG 82

                         90       100
                 ....*....|....*....|....*
gi 704172664  83 HDNQYGFEFTFrnpEDVFREFFGGR 107
Cdd:PRK10767  83 FGGGGGFGDIF---GDIFGDIFGGG 104
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 3-106 4.49e-38

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 135.81  E-value: 4.49e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704172664    3 DYYEVLGVQKHASAEDIKKAYRKLALKWHPDKNPDnkEEAERQFKQVAEAYEVLSDVKKRDIYDRYGKEGLinGGGGGNH 82
Cdd:TIGR02349   1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD--KEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGF--NGGGGGG 76

                          90       100
                  ....*....|....*....|....*
gi 704172664   83 HDNQYGFEFT-FRNPEDVFREFFGG 106
Cdd:TIGR02349  77 GGGFNGFDIGfFGDFGDIFGDFFGG 101
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 3-66 2.21e-35

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 120.27  E-value: 2.21e-35
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 704172664    3 DYYEVLGVQKHASAEDIKKAYRKLALKWHPDKNPDNKeEAERQFKQVAEAYEVLSDVKKRDIYD 66
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDP-EAEEKFKEINEAYEVLSDPEKRAIYD 63
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 3-73 6.17e-35

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 121.73  E-value: 6.17e-35
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 704172664   3 DYYEVLGVQKHASAEDIKKAYRKLALKWHPDKNPDNKeEAERQFKQVAEAYEVLSDVKKRDIYDRYGKEGL 73
Cdd:COG0484    1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDP-EAEEKFKEINEAYEVLSDPEKRAAYDRFGHAAE 70
DnaJ smart00271
DnaJ molecular chaperone homology domain;
2-61 5.60e-31

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 108.86  E-value: 5.60e-31
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 704172664     2 VDYYEVLGVQKHASAEDIKKAYRKLALKWHPDKNPDNKEEAERQFKQVAEAYEVLSDVKK 61
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
3-106 1.86e-29

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 114.15  E-value: 1.86e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704172664   3 DYYEVLGVQKHASAEDIKKAYRKLALKWHPDKNpdNKEEAERQFKQVAEAYEVLSDVKKRDIYDRYGKEGLingggggnh 82
Cdd:NF037946   6 DYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRN--KAPDAAEIFAEINEAYEVLSNPEKRANYDKYGHDGV--------- 74

                         90       100
                 ....*....|....*....|....
gi 704172664  83 hDNQYGFEFtfrNPEDVFREFFGG 106
Cdd:NF037946  75 -DGEGGFGF---DAFDVFSSFFET 94
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 3-58 1.96e-28

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 102.24  E-value: 1.96e-28
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 704172664   3 DYYEVLGVQKHASAEDIKKAYRKLALKWHPDKNPDNkEEAERQFKQVAEAYEVLSD 58
Cdd:cd06257    1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDD-PEAEEKFKEINEAYEVLSD 55
 
Name Accession Description Interval E-value
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 3-107 3.30e-40

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 141.82  E-value: 3.30e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704172664   3 DYYEVLGVQKHASAEDIKKAYRKLALKWHPDKNPDNKeEAERQFKQVAEAYEVLSDVKKRDIYDRYGKEGLiNGGGGGNH 82
Cdd:PRK10767   5 DYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDK-EAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAF-EQGGGGGG 82

                         90       100
                 ....*....|....*....|....*
gi 704172664  83 HDNQYGFEFTFrnpEDVFREFFGGR 107
Cdd:PRK10767  83 FGGGGGFGDIF---GDIFGDIFGGG 104
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 3-106 4.49e-38

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 135.81  E-value: 4.49e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704172664    3 DYYEVLGVQKHASAEDIKKAYRKLALKWHPDKNPDnkEEAERQFKQVAEAYEVLSDVKKRDIYDRYGKEGLinGGGGGNH 82
Cdd:TIGR02349   1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD--KEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGF--NGGGGGG 76

                          90       100
                  ....*....|....*....|....*
gi 704172664   83 HDNQYGFEFT-FRNPEDVFREFFGG 106
Cdd:TIGR02349  77 GGGFNGFDIGfFGDFGDIFGDFFGG 101
PRK14294 PRK14294
chaperone protein DnaJ; Provisional
 3-105 1.55e-35

chaperone protein DnaJ; Provisional


Pssm-ID: 237664 [Multi-domain]  Cd Length: 366  Bit Score: 129.50  E-value: 1.55e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704172664   3 DYYEVLGVQKHASAEDIKKAYRKLALKWHPDKNPDNKeEAERQFKQVAEAYEVLSDVKKRDIYDRYGKEGLINGGGGGNH 82
Cdd:PRK14294   5 DYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDK-EAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSGTGFSGFS 83

                         90       100
                 ....*....|....*....|...
gi 704172664  83 hdnqyGFEFTFRNPEDVFREFFG 105
Cdd:PRK14294  84 -----GFDDIFSSFGDIFEDFFG 101
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 3-66 2.21e-35

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 120.27  E-value: 2.21e-35
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 704172664    3 DYYEVLGVQKHASAEDIKKAYRKLALKWHPDKNPDNKeEAERQFKQVAEAYEVLSDVKKRDIYD 66
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDP-EAEEKFKEINEAYEVLSDPEKRAIYD 63
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 3-73 6.17e-35

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 121.73  E-value: 6.17e-35
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 704172664   3 DYYEVLGVQKHASAEDIKKAYRKLALKWHPDKNPDNKeEAERQFKQVAEAYEVLSDVKKRDIYDRYGKEGL 73
Cdd:COG0484    1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDP-EAEEKFKEINEAYEVLSDPEKRAAYDRFGHAAE 70
PRK14298 PRK14298
chaperone protein DnaJ; Provisional
 3-106 1.90e-33

chaperone protein DnaJ; Provisional


Pssm-ID: 184612 [Multi-domain]  Cd Length: 377  Bit Score: 124.19  E-value: 1.90e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704172664   3 DYYEVLGVQKHASAEDIKKAYRKLALKWHPDKNPDnkEEAERQFKQVAEAYEVLSDVKKRDIYDRYGKEGLingggggnh 82
Cdd:PRK14298   6 DYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKE--PDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGI--------- 74

                         90       100
                 ....*....|....*....|....*....
gi 704172664  83 hDNQYGFEFTFRNP-----EDVFREFFGG 106
Cdd:PRK14298  75 -DNQYSAEDIFRGAdfggfGDIFEMFFGG 102
PRK14301 PRK14301
chaperone protein DnaJ; Provisional
 3-103 6.96e-32

chaperone protein DnaJ; Provisional


Pssm-ID: 237668 [Multi-domain]  Cd Length: 373  Bit Score: 119.85  E-value: 6.96e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704172664   3 DYYEVLGVQKHASAEDIKKAYRKLALKWHPDKNPDNkEEAERQFKQVAEAYEVLSDVKKRDIYDRYGKEGLingggggnh 82
Cdd:PRK14301   5 DYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDN-PEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGV--------- 74

                         90       100
                 ....*....|....*....|.
gi 704172664  83 hdNQYGFEFTFRNPEDVFREF 103
Cdd:PRK14301  75 --NGNGGFGGFSSAEDIFSHF 93
DnaJ smart00271
DnaJ molecular chaperone homology domain;
2-61 5.60e-31

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 108.86  E-value: 5.60e-31
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 704172664     2 VDYYEVLGVQKHASAEDIKKAYRKLALKWHPDKNPDNKEEAERQFKQVAEAYEVLSDVKK 61
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60
PRK14280 PRK14280
molecular chaperone DnaJ;
3-109 8.42e-30

molecular chaperone DnaJ;


Pssm-ID: 237656 [Multi-domain]  Cd Length: 376  Bit Score: 114.43  E-value: 8.42e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704172664   3 DYYEVLGVQKHASAEDIKKAYRKLALKWHPDKnpdNKEE-AERQFKQVAEAYEVLSDVKKRDIYDRYGKEGLINGGGGGN 81
Cdd:PRK14280   5 DYYEVLGVSKSASKDEIKKAYRKLSKKYHPDI---NKEEgADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQGFGGGG 81

                         90       100       110
                 ....*....|....*....|....*....|..
gi 704172664  82 HHDNQYGFEFTFrnpEDVFREFFGG----RDP 109
Cdd:PRK14280  82 FGGGDFGGGFGF---EDIFSSFFGGggrrRDP 110
PRK14284 PRK14284
chaperone protein DnaJ; Provisional
 3-105 9.20e-30

chaperone protein DnaJ; Provisional


Pssm-ID: 237658 [Multi-domain]  Cd Length: 391  Bit Score: 114.55  E-value: 9.20e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704172664   3 DYYEVLGVQKHASAEDIKKAYRKLALKWHPDKNPDNKeEAERQFKQVAEAYEVLSDVKKRDIYDRYGKEGLINGGGGGNH 82
Cdd:PRK14284   2 DYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDA-EAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGAGGFGG 80

                         90       100
                 ....*....|....*....|...
gi 704172664  83 HDnqygfeftFRNPEDVFREFFG 105
Cdd:PRK14284  81 AG--------MGNMEDALRTFMG 95
PRK14291 PRK14291
chaperone protein DnaJ; Provisional
 3-106 1.47e-29

chaperone protein DnaJ; Provisional


Pssm-ID: 237661 [Multi-domain]  Cd Length: 382  Bit Score: 113.71  E-value: 1.47e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704172664   3 DYYEVLGVQKHASAEDIKKAYRKLALKWHPDKNPDnkEEAERQFKQVAEAYEVLSDVKKRDIYDRYGKEGLINGGGGGNH 82
Cdd:PRK14291   4 DYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN--PEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSGQQQQG 81

                         90       100
                 ....*....|....*....|....*
gi 704172664  83 hdnQYGF-EFTFRNPEDVFREFFGG 106
Cdd:PRK14291  82 ---QEGFsDFGGGNIEDILEDVFDI 103
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
3-106 1.86e-29

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 114.15  E-value: 1.86e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704172664   3 DYYEVLGVQKHASAEDIKKAYRKLALKWHPDKNpdNKEEAERQFKQVAEAYEVLSDVKKRDIYDRYGKEGLingggggnh 82
Cdd:NF037946   6 DYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRN--KAPDAAEIFAEINEAYEVLSNPEKRANYDKYGHDGV--------- 74

                         90       100
                 ....*....|....*....|....
gi 704172664  83 hDNQYGFEFtfrNPEDVFREFFGG 106
Cdd:NF037946  75 -DGEGGFGF---DAFDVFSSFFET 94
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
 3-110 4.13e-29

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 112.19  E-value: 4.13e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704172664   3 DYYEVLGVQKHASAEDIKKAYRKLALKWHPDKNPDNKEEAERQFKQVAEAYEVLSDVKKRDIYDRYGKEGlingGGGGNH 82
Cdd:PRK14282   5 DYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVG----EQPPYQ 80

                         90       100       110
                 ....*....|....*....|....*....|
gi 704172664  83 HDNQYGFEFtfrnpEDVFREF--FGGRDPF 110
Cdd:PRK14282  81 ETESGGGFF-----EDIFKDFenIFNRDIF 105
PRK14289 PRK14289
molecular chaperone DnaJ;
3-106 7.54e-29

molecular chaperone DnaJ;


Pssm-ID: 237660 [Multi-domain]  Cd Length: 386  Bit Score: 111.85  E-value: 7.54e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704172664   3 DYYEVLGVQKHASAEDIKKAYRKLALKWHPDKNPDNKeEAERQFKQVAEAYEVLSDVKKRDIYDRYGKEGLINGGGGGNH 82
Cdd:PRK14289   6 DYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDK-EAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGVGGAAGGGGF 84

                         90       100
                 ....*....|....*....|....
gi 704172664  83 HDNQYGFEFTFRNPEDVFREFFGG 106
Cdd:PRK14289  85 SGEGMSMEDIFSMFGDIFGGHGGG 108
PRK14290 PRK14290
chaperone protein DnaJ; Provisional
 3-106 8.84e-29

chaperone protein DnaJ; Provisional


Pssm-ID: 172778 [Multi-domain]  Cd Length: 365  Bit Score: 111.18  E-value: 8.84e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704172664   3 DYYEVLGVQKHASAEDIKKAYRKLALKWHPDKNPDNKEEAERQFKQVAEAYEVLSDVKKRDIYDRYGKEGLINGGGGGNH 82
Cdd:PRK14290   4 DYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGAGGSNFNW 83

                         90       100
                 ....*....|....*....|....*
gi 704172664  83 HDnqygfeFT-FRNPEDVFREFFGG 106
Cdd:PRK14290  84 DN------FThFSDINDIFNQIFGG 102
PRK14281 PRK14281
chaperone protein DnaJ; Provisional
 3-73 1.89e-28

chaperone protein DnaJ; Provisional


Pssm-ID: 237657 [Multi-domain]  Cd Length: 397  Bit Score: 111.05  E-value: 1.89e-28
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 704172664   3 DYYEVLGVQKHASAEDIKKAYRKLALKWHPDKNPDNKeEAERQFKQVAEAYEVLSDVKKRDIYDRYGKEGL 73
Cdd:PRK14281   4 DYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNK-EAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGV 73
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 3-58 1.96e-28

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 102.24  E-value: 1.96e-28
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 704172664   3 DYYEVLGVQKHASAEDIKKAYRKLALKWHPDKNPDNkEEAERQFKQVAEAYEVLSD 58
Cdd:cd06257    1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDD-PEAEEKFKEINEAYEVLSD 55
CbpA COG2214
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
1-67 4.53e-27

Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];


Pssm-ID: 441816 [Multi-domain]  Cd Length: 91  Bit Score: 99.79  E-value: 4.53e-27
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 704172664   1 MVDYYEVLGVQKHASAEDIKKAYRKLALKWHPDKNPDNKEEAERQFKQVAEAYEVLSDVKKRDIYDR 67
Cdd:COG2214    4 LKDHYAVLGVPPDASLEEIRQAYRRLAKLLHPDRGGELKALAEELFQRLNEAYEVLSDPERRAEYDR 70
PRK14277 PRK14277
chaperone protein DnaJ; Provisional
 3-105 5.52e-27

chaperone protein DnaJ; Provisional


Pssm-ID: 184599 [Multi-domain]  Cd Length: 386  Bit Score: 106.81  E-value: 5.52e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704172664   3 DYYEVLGVQKHASAEDIKKAYRKLALKWHPDKNPDNKeEAERQFKQVAEAYEVLSDVKKRDIYDRYG----KEGLINGGG 78
Cdd:PRK14277   6 DYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDK-EAEQKFKEINEAYEILSDPQKRAQYDQFGhaafDPGGFGQGG 84

                         90       100
                 ....*....|....*....|....*..
gi 704172664  79 GGNHHDNQYGFEFTFRNPEDVFREFFG 105
Cdd:PRK14277  85 FGQGGFGGGGFDFDFGGFGDIFEDIFG 111
SEC63 COG5407
Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular ...
 3-62 7.75e-27

Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 444165 [Multi-domain]  Cd Length: 61  Bit Score: 98.15  E-value: 7.75e-27
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 704172664   3 DYYEVLGVQKHASAEDIKKAYRKLALKWHPDKNPDNKEEAERqFKQVAEAYEVLSDVKKR 62
Cdd:COG5407    1 DPYEVLGVAKTASADEIKKAYRKLAKKYHPDRNKGDPKAEER-FKEINEAYELLSDAEKR 59
PRK14297 PRK14297
molecular chaperone DnaJ;
3-106 9.17e-27

molecular chaperone DnaJ;


Pssm-ID: 184611 [Multi-domain]  Cd Length: 380  Bit Score: 106.02  E-value: 9.17e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704172664   3 DYYEVLGVQKHASAEDIKKAYRKLALKWHPDKNPDNKeEAERQFKQVAEAYEVLSDVKKRDIYDRYGKEGLinGGGGGNH 82
Cdd:PRK14297   5 DYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNK-EAEEKFKEINEAYQVLSDPQKKAQYDQFGTADF--NGAGGFG 81

                         90       100
                 ....*....|....*....|....*
gi 704172664  83 HDNQYGFEFT-FRNPEDVFREFFGG 106
Cdd:PRK14297  82 SGGFGGFDFSdMGGFGDIFDSFFGG 106
PRK14286 PRK14286
chaperone protein DnaJ; Provisional
 4-106 1.31e-26

chaperone protein DnaJ; Provisional


Pssm-ID: 172774 [Multi-domain]  Cd Length: 372  Bit Score: 105.46  E-value: 1.31e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704172664   4 YYEVLGVQKHASAEDIKKAYRKLALKWHPDKNPDNKeEAERQFKQVAEAYEVLSDVKKRDIYDRYGKEGlINGGGGGNHH 83
Cdd:PRK14286   6 YYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNK-ESEEKFKEATEAYEILRDPKKRQAYDQFGKAG-VNAGAGGFGQ 83

                         90       100
                 ....*....|....*....|...
gi 704172664  84 DNQYGFEFTFRNPEDVFREFFGG 106
Cdd:PRK14286  84 GAYTDFSDIFGDFGDIFGDFFGG 106
PRK14292 PRK14292
chaperone protein DnaJ; Provisional
 1-106 3.14e-26

chaperone protein DnaJ; Provisional


Pssm-ID: 237662 [Multi-domain]  Cd Length: 371  Bit Score: 104.59  E-value: 3.14e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704172664   1 MVDYYEVLGVQKHASAEDIKKAYRKLALKWHPDKNPDnkEEAERQFKQVAEAYEVLSDVKKRDIYDRYGKegliNGGGGG 80
Cdd:PRK14292   1 MMDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKE--KGAAEKFAQINEAYAVLSDAEKRAHYDRFGT----APGAGM 74

                         90       100
                 ....*....|....*....|....*.
gi 704172664  81 NHHDNQYGFEFtfrNPEDVFREFFGG 106
Cdd:PRK14292  75 PGGDPFGGMGF---DPMDIFEQLFGG 97
PRK14276 PRK14276
chaperone protein DnaJ; Provisional
 3-109 3.99e-26

chaperone protein DnaJ; Provisional


Pssm-ID: 237653 [Multi-domain]  Cd Length: 380  Bit Score: 104.40  E-value: 3.99e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704172664   3 DYYEVLGVQKHASAEDIKKAYRKLALKWHPDKnpdNKEE-AERQFKQVAEAYEVLSDVKKRDIYDRYGKEGLINGGGGGN 81
Cdd:PRK14276   5 EYYDRLGVSKDASQDEIKKAYRKLSKKYHPDI---NKEPgAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGFGGGA 81

                         90       100       110
                 ....*....|....*....|....*....|..
gi 704172664  82 HHDNQYGFEFTFRNPEDVFREFFGG----RDP 109
Cdd:PRK14276  82 GGFGGFDGSGGFGGFEDIFSSFFGGggarRNP 113
PRK14278 PRK14278
chaperone protein DnaJ; Provisional
 3-106 5.94e-26

chaperone protein DnaJ; Provisional


Pssm-ID: 237654 [Multi-domain]  Cd Length: 378  Bit Score: 103.98  E-value: 5.94e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704172664   3 DYYEVLGVQKHASAEDIKKAYRKLALKWHPDKNPDnkEEAERQFKQVAEAYEVLSDVKKRDIYDrYGKEGLINGGGGGNh 82
Cdd:PRK14278   4 DYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPD--EEAQEKFKEISVAYEVLSDPEKRRIVD-LGGDPLESAGGGGG- 79

                         90       100
                 ....*....|....*....|....
gi 704172664  83 hdnqyGFEFTFRNPEDVFREFFGG 106
Cdd:PRK14278  80 -----GFGGGFGGLGDVFEAFFGG 98
PRK14285 PRK14285
chaperone protein DnaJ; Provisional
 3-107 6.63e-25

chaperone protein DnaJ; Provisional


Pssm-ID: 172773 [Multi-domain]  Cd Length: 365  Bit Score: 100.84  E-value: 6.63e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704172664   3 DYYEVLGVQKHASAEDIKKAYRKLALKWHPDKNPDNKeEAERQFKQVAEAYEVLSDVKKRDIYDRYGKEGLINGGGGGNH 82
Cdd:PRK14285   4 DYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNK-EAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGGGGFEGF 82

                         90       100
                 ....*....|....*....|....*
gi 704172664  83 HDNQYGFEFTFRNPEDVFREFFGGR 107
Cdd:PRK14285  83 SGGFSGFSDIFEDFGDIFDSFFTGN 107
PRK14283 PRK14283
chaperone protein DnaJ; Provisional
 3-106 9.50e-25

chaperone protein DnaJ; Provisional


Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 100.67  E-value: 9.50e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704172664   3 DYYEVLGVQKHASAEDIKKAYRKLALKWHPDKNPDnkEEAERQFKQVAEAYEVLSDVKKRDIYDRYGKEGLingggggnh 82
Cdd:PRK14283   6 DYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEE--EGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGM--------- 74

                         90       100
                 ....*....|....*....|....*.
gi 704172664  83 hdNQYGFEFTFRNP--EDVFREFFGG 106
Cdd:PRK14283  75 --DGFSQEDIFNNInfEDIFQGFGFG 98
PRK14279 PRK14279
molecular chaperone DnaJ;
3-66 2.95e-24

molecular chaperone DnaJ;


Pssm-ID: 237655 [Multi-domain]  Cd Length: 392  Bit Score: 99.42  E-value: 2.95e-24
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 704172664   3 DYYEVLGVQKHASAEDIKKAYRKLALKWHPDKNPDNKEEAERqFKQVAEAYEVLSDVKKRDIYD 66
Cdd:PRK14279  10 DFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEER-FKAVSEAHDVLSDPAKRKEYD 72
PRK14293 PRK14293
molecular chaperone DnaJ;
1-106 7.15e-24

molecular chaperone DnaJ;


Pssm-ID: 237663 [Multi-domain]  Cd Length: 374  Bit Score: 98.14  E-value: 7.15e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704172664   1 MVDYYEVLGVQKHASAEDIKKAYRKLALKWHPDKnpdNKEE-AERQFKQVAEAYEVLSDVKKRDIYDRYGKEGLiNGGGG 79
Cdd:PRK14293   2 AADYYEILGVSRDADKDELKRAYRRLARKYHPDV---NKEPgAEDRFKEINRAYEVLSDPETRARYDQFGEAGV-SGAAG 77

                         90       100
                 ....*....|....*....|....*..
gi 704172664  80 GNHHDNQYGFeftfrnpEDVFREFFGG 106
Cdd:PRK14293  78 FPDMGDMGGF-------ADIFETFFSG 97
PRK14299 PRK14299
chaperone protein DnaJ; Provisional
 3-110 8.57e-24

chaperone protein DnaJ; Provisional


Pssm-ID: 237667 [Multi-domain]  Cd Length: 291  Bit Score: 96.55  E-value: 8.57e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704172664   3 DYYEVLGVQKHASAEDIKKAYRKLALKWHPDKNPDnkEEAERQFKQVAEAYEVLSDVKKRDIYDRYGKEGlINGGGGGNH 82
Cdd:PRK14299   5 DYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKS--PGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTA-ASAGWQGPP 81

                         90       100       110
                 ....*....|....*....|....*....|.
gi 704172664  83 HDNQYGFEFTFRNPED---VFREFFGGRDPF 110
Cdd:PRK14299  82 PGPPGGGDFSGFNVGDfsdFFQQLFGGRGGF 112
termin_org_DnaJ TIGR03835
terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ ...
 3-104 6.15e-23

terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 274808 [Multi-domain]  Cd Length: 871  Bit Score: 97.19  E-value: 6.15e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704172664    3 DYYEVLGVQKHASAEDIKKAYRKLALKWHPDKNpdNKEEAERQFKQVAEAYEVLSDVKKRDIYDRYGKEGLingggggnh 82
Cdd:TIGR03835   3 DYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRN--KAPDAASIFAEINEANDVLSNPKKRANYDKYGHDGV--------- 71

                          90       100
                  ....*....|....*....|..
gi 704172664   83 hDNQYGFEFTfrnpEDVFREFF 104
Cdd:TIGR03835  72 -DREDDFDFQ----ADVFNSFF 88
PRK14295 PRK14295
molecular chaperone DnaJ;
3-66 6.19e-22

molecular chaperone DnaJ;


Pssm-ID: 237665 [Multi-domain]  Cd Length: 389  Bit Score: 92.99  E-value: 6.19e-22
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 704172664   3 DYYEVLGVQKHASAEDIKKAYRKLALKWHPDKNPDNKeEAERQFKQVAEAYEVLSDVKKRDIYD 66
Cdd:PRK14295  10 DYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDA-KAEERFKEISEAYDVLSDEKKRKEYD 72
PTZ00037 PTZ00037
DnaJ_C chaperone protein; Provisional
 4-106 9.15e-22

DnaJ_C chaperone protein; Provisional


Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 92.96  E-value: 9.15e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704172664   4 YYEVLGVQKHASAEDIKKAYRKLALKWHPDKNPDnkeeaERQFKQVAEAYEVLSDVKKRDIYDRYGKEGLingggggnhh 83
Cdd:PTZ00037  30 LYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD-----PEKFKEISRAYEVLSDPEKRKIYDEYGEEGL---------- 94

                         90       100
                 ....*....|....*....|...
gi 704172664  84 DNQYGFEftfrNPEDVFREFFGG 106
Cdd:PTZ00037  95 EGGEQPA----DASDLFDLIFGG 113
PRK14288 PRK14288
molecular chaperone DnaJ;
2-73 6.67e-21

molecular chaperone DnaJ;


Pssm-ID: 172776 [Multi-domain]  Cd Length: 369  Bit Score: 89.75  E-value: 6.67e-21
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 704172664   2 VDYYEVLGVQKHASAEDIKKAYRKLALKWHPDKNPDNKeEAERQFKQVAEAYEVLSDVKKRDIYDRYGKEGL 73
Cdd:PRK14288   3 LSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDK-EAEEKFKLINEAYGVLSDEKKRALYDRYGKKGL 73
PRK14287 PRK14287
chaperone protein DnaJ; Provisional
 3-106 3.47e-19

chaperone protein DnaJ; Provisional


Pssm-ID: 237659 [Multi-domain]  Cd Length: 371  Bit Score: 85.06  E-value: 3.47e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704172664   3 DYYEVLGVQKHASAEDIKKAYRKLALKWHPDKNpdNKEEAERQFKQVAEAYEVLSDVKKRDIYDRYGKeglingggggnh 82
Cdd:PRK14287   5 DYYEVLGVDRNASVDEVKKAYRKLARKYHPDVN--KAPDAEDKFKEVKEAYDTLSDPQKKAHYDQFGH------------ 70

                         90       100
                 ....*....|....*....|....*...
gi 704172664  83 HDNQYGF----EFTFRNPEDVFREFFGG 106
Cdd:PRK14287  71 TDPNQGFggggAGDFGGFSDIFDMFFGG 98
PRK14300 PRK14300
chaperone protein DnaJ; Provisional
 3-104 2.35e-18

chaperone protein DnaJ; Provisional


Pssm-ID: 172788 [Multi-domain]  Cd Length: 372  Bit Score: 82.75  E-value: 2.35e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704172664   3 DYYEVLGVQKHASAEDIKKAYRKLALKWHPDKNpdNKEEAERQFKQVAEAYEVLSDVKKRDIYDRYGKEGLiNGGGGGNH 82
Cdd:PRK14300   4 DYYQILGVSKTASQADLKKAYLKLAKQYHPDTT--DAKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAF-QNQQSRGG 80

                         90       100
                 ....*....|....*....|..
gi 704172664  83 HDNQYGFEftfRNPEDVFREFF 104
Cdd:PRK14300  81 GGNHGGFH---PDINDIFGDFF 99
PRK10266 PRK10266
curved DNA-binding protein;
3-67 3.85e-17

curved DNA-binding protein;


Pssm-ID: 182347 [Multi-domain]  Cd Length: 306  Bit Score: 78.71  E-value: 3.85e-17
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 704172664   3 DYYEVLGVQKHASAEDIKKAYRKLALKWHPD--KNPDnkeeAERQFKQVAEAYEVLSDVKKRDIYDR 67
Cdd:PRK10266   5 DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDvsKEPD----AEARFKEVAEAWEVLSDEQRRAEYDQ 67
PRK14296 PRK14296
chaperone protein DnaJ; Provisional
 3-100 1.92e-16

chaperone protein DnaJ; Provisional


Pssm-ID: 237666 [Multi-domain]  Cd Length: 372  Bit Score: 77.29  E-value: 1.92e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704172664   3 DYYEVLGVQKHASAEDIKKAYRKLALKWHPDKNpdNKEEAERQFKQVAEAYEVLSDVKKRDIYDRYGKEGLingggggnh 82
Cdd:PRK14296   5 DYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLN--KSPDAHDKMVEINEAADVLLDKDKRKQYDQFGHAAF--------- 73

                         90
                 ....*....|....*...
gi 704172664  83 hDNQYGFEFTFRNPEDVF 100
Cdd:PRK14296  74 -DGSSGFSSNFGDFEDLF 90
DjlA COG1076
DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];
1-64 3.44e-14

DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440694 [Multi-domain]  Cd Length: 75  Bit Score: 65.59  E-value: 3.44e-14
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 704172664   1 MVDYYEVLGVQKHASAEDIKKAYRKLALKWHPDK-----NPDNKEEAERQFKQVAEAYEVLSDVKKRDI 64
Cdd:COG1076    3 LDDAFELLGLPPDADDAELKRAYRKLQREHHPDRlaaglPEEEQRLALQKAAAINEAYETLKDPRGIDL 71
PTZ00341 PTZ00341
Ring-infected erythrocyte surface antigen; Provisional
 4-73 4.01e-12

Ring-infected erythrocyte surface antigen; Provisional


Pssm-ID: 173534 [Multi-domain]  Cd Length: 1136  Bit Score: 65.58  E-value: 4.01e-12
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704172664    4 YYEVLGVQKHASAEDIKKAYRKLALKWHPDKNPDNkeEAERQFKQVAEAYEVLSDVKKRDIYDRYGKEGL 73
Cdd:PTZ00341  575 FYDILGVGVNADMKEISERYFKLAENYYPPKRSGN--EGFHKFKKINEAYQILGDIDKKKMYNKFGYDGI 642
ZUO1 COG5269
Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / ...
 2-66 3.60e-07

Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227594 [Multi-domain]  Cd Length: 379  Bit Score: 50.03  E-value: 3.60e-07
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 704172664   2 VDYYEVLGVQKH---ASAEDIKKAYRKLALKWHPDKNPDNKEEAERQ-FKQVAEAYEVLSDVKKRDIYD 66
Cdd:COG5269   43 VDLYALLGLSKYrtkAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEfFKLIQKAREVLGDRKLRLQYD 111
djlA PRK09430
co-chaperone DjlA;
3-56 1.77e-06

co-chaperone DjlA;


Pssm-ID: 236512 [Multi-domain]  Cd Length: 267  Bit Score: 47.50  E-value: 1.77e-06
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 704172664   3 DYYEVLGVQKHASAEDIKKAYRKLALKWHPDK------NPDNKEEAERQFKQVAEAYEVL 56
Cdd:PRK09430 201 DAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKlvakglPPEMMEMAKEKAQEIQAAYELI 260
hscB PRK01356
co-chaperone HscB; Provisional
 1-65 4.05e-04

co-chaperone HscB; Provisional


Pssm-ID: 167217 [Multi-domain]  Cd Length: 166  Bit Score: 39.86  E-value: 4.05e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704172664   1 MVDYYEVLGVQKHASA--EDIKKAYRKLALKWHPDKnPDNKEEAERQFKQVAE---AYEVLSDVKKRDIY 65
Cdd:PRK01356   1 MQNYFQLLGLPQEYNIdlKILEKQYFAMQVKYHPDK-AKTLQEKEQNLIIASElnnAYSTLKDALKRAEY 69
PHA03102 PHA03102
Small T antigen; Reviewed
 6-34 1.13e-03

Small T antigen; Reviewed


Pssm-ID: 222986 [Multi-domain]  Cd Length: 153  Bit Score: 38.50  E-value: 1.13e-03
                         10        20        30
                 ....*....|....*....|....*....|.
gi 704172664   6 EVLGVQKHA--SAEDIKKAYRKLALKWHPDK 34
Cdd:PHA03102   9 DLLGLPRSAwgNLPLMRKAYLRKCLEFHPDK 39
PHA02624 PHA02624
large T antigen; Provisional
 6-37 2.92e-03

large T antigen; Provisional


Pssm-ID: 222912 [Multi-domain]  Cd Length: 647  Bit Score: 38.43  E-value: 2.92e-03
                         10        20        30
                 ....*....|....*....|....*....|....
gi 704172664   6 EVLGVQKHA--SAEDIKKAYRKLALKWHPDKNPD 37
Cdd:PHA02624  15 DLLGLPMAAwgNLPLMRKAYLRKCKEYHPDKGGD 48
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
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