|
Name |
Accession |
Description |
Interval |
E-value |
| HMMR_N |
pfam15905 |
Hyaluronan mediated motility receptor N-terminal; HMMR_N is the N-terminal region of ... |
1-333 |
1.50e-83 |
|
Hyaluronan mediated motility receptor N-terminal; HMMR_N is the N-terminal region of eukaryotic hyaluronan-mediated motility receptor proteins. The protein is functionally associated with BRCA1 and thus predicted to be a common, low-penetrance breast cancer candidate.
Pssm-ID: 464932 [Multi-domain] Cd Length: 329 Bit Score: 267.45 E-value: 1.50e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 1 CTPL*GSYGVKSPDALRSFLSCETRQGVRKQK---SETNVNNEKNAPTPVAGRRLAALGTTPSKQTLkpkkdltlMKEKK 77
Cdd:pfam15905 2 CAPPPGSYDVKTSDALKGPVSFEKSQRFRKQKaaeSQPNLNNSKDASTPATARKVKSLELKKKSQKN--------LKESK 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 78 KRNTLEKEIRALVREYGEQSKKLEALEEAFAKMEAKFKSSVREKTSLLANVACLKKQILEVTRINELLKSKLSEDGVEKK 157
Cdd:pfam15905 74 DQKELEKEIRALVQERGEQDKRLQALEEELEKVEAKLNAAVREKTSLSASVASLEKQLLELTRVNELLKAKFSEDGTQKK 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 158 MSSLCQELMKLRNKRDGKEKAALAKQEDMEMKLPEVQRNLEHSKGEVAQLEEKLSATEREKVEEKSDTEKLLEYITELSG 237
Cdd:pfam15905 154 MSSLSMELMKLRNKLEAKMKEVMAKQEGMEGKLQVTQKNLEHSKGKVAQLEEKLVSTEKEKIEEKSETEKLLEYITELSC 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 238 VAETVEKYKLDVAQMEETLMKKDQEIEILMDTLKTKEEESFKIIEELTERCELLQQEKEKELSESRRKFLIMNAEIGDLK 317
Cdd:pfam15905 234 VSEQVEKYKLDIAQLEELLKEKNDEIESLKQSLEEKEQELSKQIKDLNEKCKLLESEKEELLREYEEKEQTLNAELEELK 313
|
330
....*....|....*.
gi 704469152 318 KKIVLEEQAHQKLLQK 333
Cdd:pfam15905 314 EKLTLEEQEHQKLQQK 329
|
|
| HMMR_C |
pfam15908 |
Hyaluronan mediated motility receptor C-terminal; HMMR_C is the C-terminal region of ... |
551-705 |
3.53e-58 |
|
Hyaluronan mediated motility receptor C-terminal; HMMR_C is the C-terminal region of eukaryotic hyaluronan-mediated motility receptor proteins. The protein is functionally associated with BRCA1 and thus predicted to be a common, low-penetrance breast cancer candidate.
Pssm-ID: 464934 [Multi-domain] Cd Length: 157 Bit Score: 193.98 E-value: 3.53e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 551 KRKLEMERSRK--HEDVTTSLKEEVKTWRKLYEDLHNKTKPFQQQLDAYEAEKNVLLNEHGAAQEELNKLSDAYAKLLGH 628
Cdd:pfam15908 1 TKQLEMEEQRKarLENTVDELTEEIKKWRNLYEELYNKTKPFQEQLDAFEAEKNALLNENGAAQEELNKLSDAYAKLLGH 80
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 704469152 629 QNQKQKIKHVMKLKEENTHLKQDVSKLRALLAKEKQTSGDLQEQLYTIQSIRHFDPAKGFQHDSKENIPPKTPFKEG 705
Cdd:pfam15908 81 QNQKQKIKHVVKLKEENTQLKQEVSKLRSQLAKEKQVQKKLQEQLNGAQGIRRFDPSKAFQHESKENFEPKTPLKEG 157
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
163-500 |
4.91e-11 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 66.23 E-value: 4.91e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 163 QELMKLRNKRD---GKEKAALAKQEDMEMKLPEVQRNLEHSKGEVAQLEEKLSATEREKVEEKSDTEKLLEYIT----EL 235
Cdd:TIGR02168 677 REIEELEEKIEeleEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAqlskEL 756
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 236 SGVAETVEKYKLDVAQMEETLMKKDQEIEILMDTLKTKEEESFKIIEELTercellqqEKEKELSESRRKFLIMNAEIGD 315
Cdd:TIGR02168 757 TELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALD--------ELRAELTLLNEEAANLRERLES 828
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 316 LKKKIVLEEQAHQKLLQKHEEM----------VSQLQQEKESSASMHQELLQLKDEVTSERHLLQEELNDTMNELNKLha 385
Cdd:TIGR02168 829 LERRIAATERRLEDLEEQIEELsedieslaaeIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELREL-- 906
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 386 kekkaEKLVKRLEQEIKSQALELGQMEVKLKGKNAELEQINEmrsnavlQIQEEHSNTLRKLGETVAEFESYKKTVAEEI 465
Cdd:TIGR02168 907 -----ESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQE-------RLSEEYSLTLEEAEALENKIEDDEEEARRRL 974
|
330 340 350
....*....|....*....|....*....|....*
gi 704469152 466 SSLKLEntslqeevadLKKIGQVNLQLLQEAENTK 500
Cdd:TIGR02168 975 KRLENK----------IKELGPVNLAAIEEYEELK 999
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
74-561 |
7.92e-10 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 62.47 E-value: 7.92e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 74 KEKKKRNTLEKEIRALVREYGEQSKKLEALEEA--FAKMEAKFKSSVREKTSLLANVACLKKQilEVTRINELLKSKLSE 151
Cdd:PTZ00121 1312 EEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAaeAAKAEAEAAADEAEAAEEKAEAAEKKKE--EAKKKADAAKKKAEE 1389
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 152 ----DGVEKKMSSLCQELMKLRNKRDGKEKAALAKQEDMEMKLPEVQRNLEHSKGEVAQL----EEKLSATE-REKVEEK 222
Cdd:PTZ00121 1390 kkkaDEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAkkkaEEAKKAEEaKKKAEEA 1469
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 223 SDTEKLLEYITELSGVAETVEKYKLDVAQMEEtlMKKDQEIEILMDTLKTKEE----ESFKIIEELTERCELLQQEKEKE 298
Cdd:PTZ00121 1470 KKADEAKKKAEEAKKADEAKKKAEEAKKKADE--AKKAAEAKKKADEAKKAEEakkaDEAKKAEEAKKADEAKKAEEKKK 1547
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 299 LSESRRKFLIMNAEIGDLKKKIVLEEQAHQKLLQKHEEMVSQLQQEKESSASMHQELLQLKDE---------VTSERHLL 369
Cdd:PTZ00121 1548 ADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEeakkaeeakIKAEELKK 1627
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 370 QEELNDTMNELNKLHAKEKKAEKLVKRLEQEIKSQALELGQMEVKLKGKNAELEQINEMRSNAVLQIQEEhsntlrklGE 449
Cdd:PTZ00121 1628 AEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKE--------AE 1699
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 450 TVAEFESYKKTVAEEISslKLENTSLQEEVADLKKigqvnLQLLQEAENTKNKAKEecARMLLEVQTKLA-LKEAEAEST 528
Cdd:PTZ00121 1700 EAKKAEELKKKEAEEKK--KAEELKKAEEENKIKA-----EEAKKEAEEDKKKAEE--AKKDEEEKKKIAhLKKEEEKKA 1770
|
490 500 510
....*....|....*....|....*....|...
gi 704469152 529 KESCLAHMAKLQEKLEErtEDLKRKLEMERSRK 561
Cdd:PTZ00121 1771 EEIRKEKEAVIEEELDE--EDEKRRMEVDKKIK 1801
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
181-557 |
2.62e-09 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 60.85 E-value: 2.62e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 181 AKQEDMEMKLPEVQRNLEHSKGEVAQLEEKLSATEREKVEEKSDTEKLLEYItelsgvaetvEKYKLDVAQMEETLMKKD 260
Cdd:TIGR02169 681 ERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEE----------EKLKERLEELEEDLSSLE 750
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 261 QEIEILMDTLKTKEEEsfkiIEELTERCELLQQEKEK-ELSESRRKFLIMNAEIGDLKKKIVLEEqahqKLLQKHEEMVS 339
Cdd:TIGR02169 751 QEIENVKSELKELEAR----IEELEEDLHKLEEALNDlEARLSHSRIPEIQAELSKLEEEVSRIE----ARLREIEQKLN 822
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 340 QLQQEKESSASMHQELLQLKDEVTSERHLLQEELNDTMNELNKLHAKEKKAEKLVKRLEQEIKSQALELGQMEVKLKGKN 419
Cdd:TIGR02169 823 RLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELE 902
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 420 AELEQINEMRSNAVlQIQEEHSNTLRKLGETVAEFESYKKT---VAEEISSLKLENTSLQEEVADLKKIGQVNLQLLQEA 496
Cdd:TIGR02169 903 RKIEELEAQIEKKR-KRLSELKAKLEALEEELSEIEDPKGEdeeIPEEELSLEDVQAELQRVEEEIRALEPVNMLAIQEY 981
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 704469152 497 entknkakEECARMLLEVQTKLALKEAEAESTKEsclahmaklqekLEERTEDLKRKLEME 557
Cdd:TIGR02169 982 --------EEVLKRLDELKEKRAKLEEERKAILE------------RIEEYEKKKREVFME 1022
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
280-615 |
3.49e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 60.34 E-value: 3.49e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 280 IIEELTERCELLQQEKEKElsesrRKFLIMNAEIGDLKKKI-VLEEQAHQKLLQKHEEMVSQLQQEKESsasmHQELLQL 358
Cdd:COG1196 194 ILGELERQLEPLERQAEKA-----ERYRELKEELKELEAELlLLKLRELEAELEELEAELEELEAELEE----LEAELAE 264
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 359 KDEVTSERHLLQEELNDtmnELNKLHAKEKKAEKLVKRLEQEIKSQALELGQMEVKLKGKNAELEQINEMRSNAVLQIQE 438
Cdd:COG1196 265 LEAELEELRLELEELEL---ELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEE 341
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 439 EhsntLRKLGETVAEFESYKKTVAEEISSLKLENTSLQEEVADLKKIGQVNLQLLQEAENTKNKAKEecarmLLEVQTKL 518
Cdd:COG1196 342 L----EEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEE-----LEEAEEAL 412
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 519 ALKEAEAESTKESCLAHMAKLQEKLEERTEDLKRKLEMERSRKHEDVTtsLKEEVKTWRKLYEDLHNKTKPFQQQLDAYE 598
Cdd:COG1196 413 LERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEA--LLELLAELLEEAALLEAALAELLEELAEAA 490
|
330
....*....|....*..
gi 704469152 599 AEKNVLLNEHGAAQEEL 615
Cdd:COG1196 491 ARLLLLLEAEADYEGFL 507
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
155-704 |
6.20e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 59.77 E-value: 6.20e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 155 EKKMSSLCQELMKLRNKRDGKEKAALAKQ--------EDMEMKLPEVQRNLEHSK--GEVAQLEEKLSATEREKVEEKSD 224
Cdd:PTZ00121 1288 EKKKADEAKKAEEKKKADEAKKKAEEAKKadeakkkaEEAKKKADAAKKKAEEAKkaAEAAKAEAEAAADEAEAAEEKAE 1367
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 225 TEKLLEyiTELSGVAETVEKYKLDVAQMEEtLMKKDQEIEILMDTLKTKEEESFKIIEELTERCELLQQEKEKELSESRR 304
Cdd:PTZ00121 1368 AAEKKK--EEAKKKADAAKKKAEEKKKADE-AKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAK 1444
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 305 KflimnaeiGDLKKKIVLEEQAHQKLLQKHEEMVSQLQQEKESSASMHQELLQLKdevtserhllQEELNDTMNELNKLH 384
Cdd:PTZ00121 1445 K--------ADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKK----------AEEAKKKADEAKKAA 1506
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 385 AKEKKAEKLVKRLEQ---------EIKSQALELGQMEVKLKG----KNAELEQINEMRSNAVLQIQEEHSNTLRKLGETV 451
Cdd:PTZ00121 1507 EAKKKADEAKKAEEAkkadeakkaEEAKKADEAKKAEEKKKAdelkKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEA 1586
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 452 AEFEsykKTVAEEISSLKLENTSLQEEVADLKKIGQVNLQLLQEAENTKNKAKEECARMLLEVQTKLALKEAEAESTKES 531
Cdd:PTZ00121 1587 KKAE---EARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKA 1663
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 532 clAHMAKLQEKLEERTEDLKRklEMERSRKHEDVTTSLKEEVKTWRKLYEDLHNKTKPFQQQLDAYEAEKNVLLNEHGAA 611
Cdd:PTZ00121 1664 --AEEAKKAEEDKKKAEEAKK--AEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEA 1739
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 612 QEELNKLSDAYAKllghQNQKQKIKHvmkLKEENTHLKQDVSKLRALLAKEKQTSGDLQEQLYTIQSIRH-FDPAKGFQH 690
Cdd:PTZ00121 1740 EEDKKKAEEAKKD----EEEKKKIAH---LKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDiFDNFANIIE 1812
|
570
....*....|....
gi 704469152 691 DSKENIPPKTPFKE 704
Cdd:PTZ00121 1813 GGKEGNLVINDSKE 1826
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
142-483 |
6.63e-09 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 59.31 E-value: 6.63e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 142 NELLKSKLSEDGVEKKMSSLCQELMKLRNKRDGKEKAALAKQEDMEMKLPEVQRNLEHSKGEVAQLEEKLSATEREKVEE 221
Cdd:TIGR02169 177 EELEEVEENIERLDLIIDEKRQQLERLRREREKAERYQALLKEKREYEGYELLKEKEALERQKEAIERQLASLEEELEKL 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 222 KSDTEKLLEYITELSGVAETVEKYKLDVAQMEETLMKKD-QEIEILMDTLKTKEEESFKIIEELTERcellQQEKEKELS 300
Cdd:TIGR02169 257 TEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKEKiGELEAEIASLERSIAEKERELEDAEER----LAKLEAEID 332
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 301 ESRRKFLIMNAEIGDLKKKIVLEEQAHQKLLQKHEEMVSQLQQEKESSASMHQELLQLK---DEVTSERHLLQEELNDTM 377
Cdd:TIGR02169 333 KLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYReklEKLKREINELKRELDRLQ 412
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 378 NELNKLHAKEKKAEKLVKRLEQEIKSQALELGQMEVKLKGKNAELEQINEMRSNAvlqiqeehSNTLRKLGETVAEFESY 457
Cdd:TIGR02169 413 EELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKY--------EQELYDLKEEYDRVEKE 484
|
330 340
....*....|....*....|....*.
gi 704469152 458 KKTVAEEISSLKLENTSLQEEVADLK 483
Cdd:TIGR02169 485 LSKLQRELAEAEAQARASEERVRGGR 510
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
163-680 |
7.30e-09 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 59.31 E-value: 7.30e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 163 QELMKLRNKRDGKEKAALAKQEDMEMKLPEVQRNLEHSKGEVAQLEEKLsateREKVEEKSDTEKLLEYITELSGVAETV 242
Cdd:PRK03918 168 GEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSEL----PELREELEKLEKEVKELEELKEEIEEL 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 243 EKYKLDVAQMEETLMKKDQEIEILMDTLKTKEEESFKIIEELTERCELlqQEKEKELSESRRKFLIMNAEIGDLKKKIVL 322
Cdd:PRK03918 244 EKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKEK--AEEYIKLSEFYEEYLDELREIEKRLSRLEE 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 323 EEQAHQKLLQKHEEMVSQLQQEKESSASMHQELLQLKdevtsERHLLQEELNDTMNELNKLHAKEK--KAEKLVKRLEqE 400
Cdd:PRK03918 322 EINGIEERIKELEEKEERLEELKKKLKELEKRLEELE-----ERHELYEEAKAKKEELERLKKRLTglTPEKLEKELE-E 395
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 401 IKSQALELGQMEVKLKGKNAELEQINEMRSNAVLQI---------------QEEHSNTLRKLGETVAEFESYKKTVAEEI 465
Cdd:PRK03918 396 LEKAKEEIEEEISKITARIGELKKEIKELKKAIEELkkakgkcpvcgreltEEHRKELLEEYTAELKRIEKELKEIEEKE 475
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 466 SSLKLENTSLQEEVADLKKIgQVNLQLLQEAENTKNKAKEECARML----------------LEVQTKLALKEAEAESTK 529
Cdd:PRK03918 476 RKLRKELRELEKVLKKESEL-IKLKELAEQLKELEEKLKKYNLEELekkaeeyeklkeklikLKGEIKSLKKELEKLEEL 554
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 530 ESCLAHMAKLQEKLEERTEDLKRKLEMERSRKHEDVTTSLKE---------EVKTWRKLYEDLHNKTKPFQQQLDAYEAE 600
Cdd:PRK03918 555 KKKLAELEKKLDELEEELAELLKELEELGFESVEELEERLKElepfyneylELKDAEKELEREEKELKKLEEELDKAFEE 634
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 601 KNVLLNEHGAAQEELNKLSDAYAKllghQNQKQKIKHVMKLKEENTHLKQDVSKLRALLAKEKQTSGDLQEQLYTIQSIR 680
Cdd:PRK03918 635 LAETEKRLEELRKELEELEKKYSE----EEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREKAK 710
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
249-625 |
1.31e-08 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 58.54 E-value: 1.31e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 249 VAQMEETLMKKDQEIEilmdTLKTKEEESFKIIEELTERCELLQQEKEKELsesrrKFLIMNAEIGDLKKKIvleeqahq 328
Cdd:TIGR02169 165 VAEFDRKKEKALEELE----EVEENIERLDLIIDEKRQQLERLRREREKAE-----RYQALLKEKREYEGYE-------- 227
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 329 kLLQKHEEMVSQLQQEKESSASMHQELLQLKDEVtSERHLLQEELNDTMNELNKlhAKEKKAEKLVKRLEQEIKSQALEL 408
Cdd:TIGR02169 228 -LLKEKEALERQKEAIERQLASLEEELEKLTEEI-SELEKRLEEIEQLLEELNK--KIKDLGEEEQLRVKEKIGELEAEI 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 409 GQMEVKLKGKNAELEQINEMRSNAVLQIqeehsntlRKLGETVAEFEsykktvaEEISSLKLENTSLQEEVADLKKIGQV 488
Cdd:TIGR02169 304 ASLERSIAEKERELEDAEERLAKLEAEI--------DKLLAEIEELE-------REIEEERKRRDKLTEEYAELKEELED 368
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 489 NLQLLQEAENTKNKAKEEcarmLLEVQTKLalkeAEAESTKESCLAHMAKLQEKLEERTEDLkRKLEMERSRKHEDVtTS 568
Cdd:TIGR02169 369 LRAELEEVDKEFAETRDE----LKDYREKL----EKLKREINELKRELDRLQEELQRLSEEL-ADLNAAIAGIEAKI-NE 438
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 704469152 569 LKEEVKTWRKLYEDLHNKTKPFQQQLDAYEAEKNVLLNEHGAAQEELNKLSDAYAKL 625
Cdd:TIGR02169 439 LEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEA 495
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
192-509 |
3.79e-08 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 56.99 E-value: 3.79e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 192 EVQRNLEHSKGEVAQLEEKLSATER--EKVEEKSD-TEKLLEYITELSGVAETVEKYKLDVA-----QMEETLMKKDQEI 263
Cdd:TIGR02168 176 ETERKLERTRENLDRLEDILNELERqlKSLERQAEkAERYKELKAELRELELALLVLRLEELreeleELQEELKEAEEEL 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 264 EILMDTLKTKEEEsfkiIEELtercELLQQEKEKELSESRRKFLIMNAEIGDLKKKIvleeqahqkllQKHEEMVSQLQQ 343
Cdd:TIGR02168 256 EELTAELQELEEK----LEEL----RLEVSELEEEIEELQKELYALANEISRLEQQK-----------QILRERLANLER 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 344 EKESSASMHQELLQLKDEVTSERHLLQEELNDTMNELNKLHAKEKKAEKLVKRLEQEIKSQALELGQMEVKLKGKNAELE 423
Cdd:TIGR02168 317 QLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIA 396
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 424 QINEMRSNA---VLQIQEEHSNTLRKLGETVAEF-ESYKKTVAEEISSLKLENTSLQEEVADLKKIGQVNLQLLQEAENT 499
Cdd:TIGR02168 397 SLNNEIERLearLERLEDRRERLQQEIEELLKKLeEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQA 476
|
330
....*....|
gi 704469152 500 KNKAKEECAR 509
Cdd:TIGR02168 477 LDAAERELAQ 486
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
281-556 |
3.95e-08 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 56.99 E-value: 3.95e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 281 IEELTERCELLQQ---EKEKELSESRRKFLIMNAEIGDLKKKIvleeqahQKLLQKHEEMVSQLQQEKESSASMHQELLQ 357
Cdd:TIGR02168 679 IEELEEKIEELEEkiaELEKALAELRKELEELEEELEQLRKEL-------EELSRQISALRKDLARLEAEVEQLEERIAQ 751
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 358 LKDEVTSerhlLQEELNDTMNELNKLHAKEKKAEKLVKRLEQEIKSQALELGQMEVKLKGKNAELEQINEmRSNAVLQIQ 437
Cdd:TIGR02168 752 LSKELTE----LEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNE-EAANLRERL 826
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 438 EEHSNTLRKLGETVAEFESYKKTVAEEISSLKLENTSLQEEVADLKKIGQVNLQLLQEAENTKNKAKEECARMLLEVQtK 517
Cdd:TIGR02168 827 ESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELR-E 905
|
250 260 270
....*....|....*....|....*....|....*....
gi 704469152 518 LALKEAEAESTKESCLAHMAKLQEKLEERTEDLKRKLEM 556
Cdd:TIGR02168 906 LESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQER 944
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
74-568 |
5.06e-08 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 56.69 E-value: 5.06e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 74 KEKKKRNTLEKEIRALVREYGEQSKKLEALEEAFAKMEAKFKSSVREKTSLLANVACLKKQILEVTRINELlKSKLSEDg 153
Cdd:PTZ00121 1326 EAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEA-KKKAEED- 1403
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 154 vEKKMSSLCQELMKLRNKRDGKEKAALAKQEDMEMKLPEVQRNLEHSKGEVaqlEEKLSATE-REKVEEKSDTEKLLEYI 232
Cdd:PTZ00121 1404 -KKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKA---EEAKKAEEaKKKAEEAKKADEAKKKA 1479
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 233 TELSGVAETVEKYKLDVAQMEEtlMKKDQEIEILMDTLKTKEE----ESFKIIEELTERCELLQQEKEKELSESRRKFLI 308
Cdd:PTZ00121 1480 EEAKKADEAKKKAEEAKKKADE--AKKAAEAKKKADEAKKAEEakkaDEAKKAEEAKKADEAKKAEEKKKADELKKAEEL 1557
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 309 MNAEIGDLKKKIVLEEQAHQKLLQKHEEMVSQLQQEKESSASMHQELLQLKDE---------VTSERHLLQEELNDTMNE 379
Cdd:PTZ00121 1558 KKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEeakkaeeakIKAEELKKAEEEKKKVEQ 1637
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 380 LNKLHAKEKKAEKLVKRLEQEIKSQALELGQMEVKLKGKNAELEQINEMRSNAVLQIQEEHSNtlRKLGETVAEFESYKK 459
Cdd:PTZ00121 1638 LKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEE--AKKAEELKKKEAEEK 1715
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 460 TVAEEISSLKLENTSLQEEVADLKKIGQVNLQLLQEAENTKNK---------------AKEECARMLLEVQTKLALKEAE 524
Cdd:PTZ00121 1716 KKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKiahlkkeeekkaeeiRKEKEAVIEEELDEEDEKRRME 1795
|
490 500 510 520
....*....|....*....|....*....|....*....|....
gi 704469152 525 AESTKESCLAHMAKLQEKLEERTEDLKRKLEMERSRKHEDVTTS 568
Cdd:PTZ00121 1796 VDKKIKDIFDNFANIIEGGKEGNLVINDSKEMEDSAIKEVADSK 1839
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
74-581 |
5.31e-08 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 56.23 E-value: 5.31e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 74 KEKKKRNTLEKEIRALVREYGEQSKKLEALEEAFAKMEAKFKSSVREKTSLLANVACLKKQILEVTRINELLKSKLSEDG 153
Cdd:PRK03918 207 REINEISSELPELREELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELK 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 154 VEKKMSSLCQELMKLRNKRDGKEKAALAKQEDMEMKLPEVQR---NLEHSKGEVAQLEEKLSATEREKVEEKSDtEKLLE 230
Cdd:PRK03918 287 ELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEErikELEEKEERLEELKKKLKELEKRLEELEER-HELYE 365
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 231 YITELSGVAETVEKYKL-----DVAQMEETLMKKDQEIEILMDTLKTKEEESFKIIEELTERCELLQQEKEK------EL 299
Cdd:PRK03918 366 EAKAKKEELERLKKRLTgltpeKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKcpvcgrEL 445
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 300 SESRRKFLI--MNAEIGDLKKKIVLEEQAHQKLLQKHEEMVSQLQQEKESSaSMHQELLQLKDEVTSERHLLQEELNDTM 377
Cdd:PRK03918 446 TEEHRKELLeeYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESELI-KLKELAEQLKELEEKLKKYNLEELEKKA 524
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 378 NELNKLHAKEKKAEKLVKRLEQEIKsqalELGQMEVKLKGKNAELEQINEMRSNAVLQIQEEHSNTLRKLGETVAEFESY 457
Cdd:PRK03918 525 EEYEKLKEKLIKLKGEIKSLKKELE----KLEELKKKLAELEKKLDELEEELAELLKELEELGFESVEELEERLKELEPF 600
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 458 ----------KKTVAEEISSLKLENTSLQEEVADLKKIGQVNLQLLQEAENTKNKAKEECARML----LEVQTKLALKEA 523
Cdd:PRK03918 601 yneylelkdaEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEEEYEELreeyLELSRELAGLRA 680
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*....
gi 704469152 524 EAESTKEScLAHMAKLQEKLEERTEDLKR-KLEMERSRKHEDVTTSLKEEVKTWRKLYE 581
Cdd:PRK03918 681 ELEELEKR-REEIKKTLEKLKEELEEREKaKKELEKLEKALERVEELREKVKKYKALLK 738
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
136-431 |
6.37e-08 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 56.22 E-value: 6.37e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 136 LEVTRINELLKSKLSEDGVEKKMSSLCQELMKLRNKRDGKEKAALAKQEDMEMKLPEVQRNLEHSKGEVAQLEEKLsatE 215
Cdd:TIGR02168 229 LLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQK---Q 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 216 REKVEEKSDTEKLLEYITELSGVAETVEKYKLDVAQMEETLmkkdQEIEILMDTLKTKEEESFKIIEELTERcellQQEK 295
Cdd:TIGR02168 306 ILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKL----EELKEELESLEAELEELEAELEELESR----LEEL 377
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 296 EKELSESRRKFLIMNAEIGDLKKKIVLEEqahqKLLQKHEEMVSQLQQEKESsasmhqellQLKDEVTSERHLLQEELND 375
Cdd:TIGR02168 378 EEQLETLRSKVAQLELQIASLNNEIERLE----ARLERLEDRRERLQQEIEE---------LLKKLEEAELKELQAELEE 444
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 704469152 376 TMNELNKLHAKEKKAEKLVKRLEQEIKSQALELGQMEVKLKGKNAELEQINEMRSN 431
Cdd:TIGR02168 445 LEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQEN 500
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
118-432 |
2.59e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 54.17 E-value: 2.59e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 118 VREKTSLLANVACLKKQILEVTRINELLKSKLSEdgVEKKMSSLCQELMKLRNKRDGKEKAALAKQEDmemklpevqrnL 197
Cdd:COG1196 224 ELEAELLLLKLRELEAELEELEAELEELEAELEE--LEAELAELEAELEELRLELEELELELEEAQAE-----------E 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 198 EHSKGEVAQLEEKLsatEREKVEEKSDTEKLLEYITELSGVAETVEKYKLDVAQMEETLMKKDQEIEILMDTLKTKEEES 277
Cdd:COG1196 291 YELLAELARLEQDI---ARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEAL 367
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 278 FKIIEELTERCELLQQEKEKELSESRrkflimnaeigdlkkkivlEEQAHQKLLQKHEEMVSQLQQEKESSASMHQELLQ 357
Cdd:COG1196 368 LEAEAELAEAEEELEELAEELLEALR-------------------AAAELAAQLEELEEAEEALLERLERLEEELEELEE 428
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 704469152 358 LKDEVTSERHLLQEELNDTMNELNKLHAKEKKAEKLVKRLEQEIKSQALELGQMEVKLKGKNAELEQINEMRSNA 432
Cdd:COG1196 429 ALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADY 503
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
322-634 |
3.06e-07 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 53.91 E-value: 3.06e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 322 LEEQAhqKLLQKHEEMVSQLQQ-EKESSASMHQELLQLKDEVTSERHLLQEELNDTMNELNKLHAKEKKAEKLVKRLEQE 400
Cdd:TIGR02168 205 LERQA--EKAERYKELKAELRElELALLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEE 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 401 IKSQALELGQMEVKLKGKNAELEQINEMRSNAVLQIQEehsntlrkLGETVAEFESYKKTVAEEISSLKLENTSLQEEVA 480
Cdd:TIGR02168 283 IEELQKELYALANEISRLEQQKQILRERLANLERQLEE--------LEAQLEELESKLDELAEELAELEEKLEELKEELE 354
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 481 DLKKIGQVNLQLLQEAENTKNKAKEEcarmLLEVQTKLALKEAEAESTKEScLAHMAKLQEKLEERTEDLKRKLEMERSR 560
Cdd:TIGR02168 355 SLEAELEELEAELEELESRLEELEEQ----LETLRSKVAQLELQIASLNNE-IERLEARLERLEDRRERLQQEIEELLKK 429
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 704469152 561 KHEDVTTSLKEEVKTWRKLYEDLHNKTKPFQQQLDAYEAEKNVLLNEHGAAQEELNKLSDAYAKLLGHQNQKQK 634
Cdd:TIGR02168 430 LEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEG 503
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
325-570 |
4.37e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 52.84 E-value: 4.37e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 325 QAHQKLLQKHEEMVSQLQQEKESSASMHQELLQLKDEVTSERHLLQEELNDTMNELNKLHAKEKKAEKLVKRLEQEIKSQ 404
Cdd:COG4942 16 AAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAEL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 405 ALELGQMEVKLKGKNAELEQINEMRSNAVLQIQEEHSNTLRKLgETVAEFESYKKTVAEEISSLKLENTSLQEEVADLKK 484
Cdd:COG4942 96 RAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRL-QYLKYLAPARREQAEELRADLAELAALRAELEAERA 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 485 IGQVNLQLLQEAENTKNKAKEECARMLLEVQTKLALKEAEaestkescLAHMAKLQEKLEERTEDLKRKLEMERSRKHED 564
Cdd:COG4942 175 ELEALLAELEEERAALEALKAERQKLLARLEKELAELAAE--------LAELQQEAEELEALIARLEAEAAAAAERTPAA 246
|
....*.
gi 704469152 565 VTTSLK 570
Cdd:COG4942 247 GFAALK 252
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
189-405 |
1.55e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.84 E-value: 1.55e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 189 KLPEVQRNLEHSKGEVAQLEEKLSATEREKVEEKSDTEKLLEYITELsgvAETVEKYKLDVAQMEETLMKKDQEIEILMD 268
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAAL---ARRIRALEQELAALEAELAELEKEIAELRA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 269 TLKTKEEESFKIIEELTERCE------LLQQEKEKELSESRRKFLIMNAEIGDLKKKIVLEEQAHQKLLQKHEEMVSQLQ 342
Cdd:COG4942 98 ELEAQKEELAELLRALYRLGRqpplalLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELE 177
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 704469152 343 QEKESSASMHQELLQLKDEVTSERHLLQEELNDTMNELNKLHAKEKKAEKLVKRLEQEIKSQA 405
Cdd:COG4942 178 ALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAA 240
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
191-403 |
1.76e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 48.37 E-value: 1.76e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 191 PEVQRNLEHSKGEVAQLEE--KLSATEREKVE----EKSDTEKLLEYITELSGVAETVEKYKLDVAQMEETLmkKDQEIE 264
Cdd:COG4913 221 PDTFEAADALVEHFDDLERahEALEDAREQIEllepIRELAERYAAARERLAELEYLRAALRLWFAQRRLEL--LEAELE 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 265 ILMDTLKTKEEEsfkiIEELTERCELLQQEKEkELSESRRKflIMNAEIGDLKKKIVLEEQAHQKLLQKHEEMVSQLQQE 344
Cdd:COG4913 299 ELRAELARLEAE----LERLEARLDALREELD-ELEAQIRG--NGGDRLEQLEREIERLERELEERERRRARLEALLAAL 371
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 704469152 345 KESSASMHQELLQLKDEVTSERHLLQEELNDTMNELNKLHAKEKKAEKLVKRLEQEIKS 403
Cdd:COG4913 372 GLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIAS 430
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
92-549 |
2.18e-05 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 48.11 E-value: 2.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 92 EYGEQSKKLEALEEAFAKMEAKFKSSVREKTSLLANVACLKKQILEV-TRINELlkskLSEDGVEkkmsslcqelmklrn 170
Cdd:PRK02224 245 EHEERREELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELeEERDDL----LAEAGLD--------------- 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 171 krDGKEKAALAKQEDMEMKLPEVQRNLEhskgevaqlEEKLSATEREKVEE--KSDTEKLLEYITELSGVAETVEKyklD 248
Cdd:PRK02224 306 --DADAEAVEARREELEDRDEELRDRLE---------ECRVAAQAHNEEAEslREDADDLEERAEELREEAAELES---E 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 249 VAQMEETLMKKDQEIEILMDTLKTKEEEsFKIIEELTERCELLQQEKEKELSESRRKFLIMNAEIGDLKKKI-----VLE 323
Cdd:PRK02224 372 LEEAREAVEDRREEIEELEEEIEELRER-FGDAPVDLGNAEDFLEELREERDELREREAELEATLRTARERVeeaeaLLE 450
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 324 EQAHQKLLQ--KHEEMVSQLQQEKESSASMHQELLQLKDEvtserhllQEELNDTMNELNKLHAKEKKAEKL---VKRLE 398
Cdd:PRK02224 451 AGKCPECGQpvEGSPHVETIEEDRERVEELEAELEDLEEE--------VEEVEERLERAEDLVEAEDRIERLeerREDLE 522
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 399 QEIKSQALELGQMEVKLKGKNAELEQINEMRSNAVLQIQEEHSNTLRKLgETVAEFESYKKTVAEEISSLKLENTSLQEE 478
Cdd:PRK02224 523 ELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAR-EEVAELNSKLAELKERIESLERIRTLLAAI 601
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 704469152 479 VADLKKIGQVNLQLLQEAE-NTKNK----AKEECARMLLEVQTKLALKEAEAEstKESCLAHMAKLQEKLEERTED 549
Cdd:PRK02224 602 ADAEDEIERLREKREALAElNDERRerlaEKRERKRELEAEFDEARIEEARED--KERAEEYLEQVEEKLDELREE 675
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
163-456 |
2.44e-05 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 47.62 E-value: 2.44e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 163 QELMKLRNKRDGKekAALAKQEDMEMKLPEVQRNLEHSKGEVAQLEEKLSATEREKVEEKsdtEKLLEYITELSGVAETV 242
Cdd:COG1196 216 RELKEELKELEAE--LLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELR---LELEELELELEEAQAEE 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 243 EKYKLDVAQMEETLMKKDQEIEILMDTLKTKEEEsfkiIEELTERCELLQQEKEKELSESRRKflimNAEIGDLKKKIVL 322
Cdd:COG1196 291 YELLAELARLEQDIARLEERRRELEERLEELEEE----LAELEEELEELEEELEELEEELEEA----EEELEEAEAELAE 362
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 323 EEQAHQKLLQKHEEMVSQLQQEKESSASMHQELLQLKDEVTS-ERHLLQEELNDTMNELNKLHAKEKKAEKLVKRLEQEI 401
Cdd:COG1196 363 AEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEElEEAEEALLERLERLEEELEELEEALAELEEEEEEEEE 442
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 704469152 402 KSQALELGQMEVKLKGKNAELEQINEMRSNAvlQIQEEHSNTLRKLGETVAEFES 456
Cdd:COG1196 443 ALEEAAEEEAELEEEEEALLELLAELLEEAA--LLEAALAELLEELAEAAARLLL 495
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
64-430 |
5.86e-05 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 46.60 E-value: 5.86e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 64 LKPKKDLTLMKEKKKRNTLEKEIRALVREYGEQSKKLEALEEAFAKMEAKFKSSVREKTSLLANVACLKKQILEV---TR 140
Cdd:PRK03918 357 LEERHELYEEAKAKKEELERLKKRLTGLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELkkaKG 436
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 141 INELLKSKLSEDGVEKKMSSLCQELMKLRNKR---DGKEKAALAKQEDMEMKLPEVQR--NLEHSKGEVAQLEEKLSATE 215
Cdd:PRK03918 437 KCPVCGRELTEEHRKELLEEYTAELKRIEKELkeiEEKERKLRKELRELEKVLKKESEliKLKELAEQLKELEEKLKKYN 516
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 216 REKVEEKS-DTEKLLEYITELSGVAETVEKYkldvAQMEETLMKKDQEIEILMDTLKTKEEESFKIIEELTERCELLQQE 294
Cdd:PRK03918 517 LEELEKKAeEYEKLKEKLIKLKGEIKSLKKE----LEKLEELKKKLAELEKKLDELEEELAELLKELEELGFESVEELEE 592
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 295 KEKELSESRRKFLimnaEIGDLKKKIVLEEQAHQKLLQKHEEMVSQLQQEKESSASMHQELLQLKDEVTSERHllqEELN 374
Cdd:PRK03918 593 RLKELEPFYNEYL----ELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEEEY---EELR 665
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 704469152 375 DTMNELNKLHAKEKKAEKLVKRLEQEIKSQALELGQMEVKLKGKNAELEQINEMRS 430
Cdd:PRK03918 666 EEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREKAKKELEKLEKALE 721
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
299-704 |
6.28e-05 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 46.61 E-value: 6.28e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 299 LSESRRKFLIMNAEIGDLKKKIVLEEQAHQKLLQKHEEMVSQLQQEKESSASMHQELLQLKDEVTSERHllQEELNDTMN 378
Cdd:COG5022 805 LLGSRKEYRSYLACIIKLQKTIKREKKLRETEEVEFSLKAEVLIQKFGRSLKAKKRFSLLKKETIYLQS--AQRVELAER 882
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 379 ELNKLHAKEKKAEKLvkrleqeiKSQALELGQMEVKLKGKNAELEQINemrsnavLQIQEEHSNTLRKLGET--VAEFES 456
Cdd:COG5022 883 QLQELKIDVKSISSL--------KLVNLELESEIIELKKSLSSDLIEN-------LEFKTELIARLKKLLNNidLEEGPS 947
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 457 YKKTVAEEISSLKLENTSLQEEVADLKKIgqvnLQLLQEAENTKNKAKEECARMLLEVQTKLALKEAEAESTKES----- 531
Cdd:COG5022 948 IEYVKLPELNKLHEVESKLKETSEEYEDL----LKKSTILVREGNKANSELKNFKKELAELSKQYGALQESTKQLkelpv 1023
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 532 CLAHMAKLQEKLEERTEDLKRKLEMersrkhEDVTTSLKEEVKTWRKLYEDLHN-KTKPFQQQLDAYEAEK-NVLLNEHG 609
Cdd:COG5022 1024 EVAELQSASKIISSESTELSILKPL------QKLKGLLLLENNQLQARYKALKLrRENSLLDDKQLYQLEStENLLKTIN 1097
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 610 AAQEELNKLSdayakLLGHQNQKQKIKHVMKLKEENTHLKQDVSKLRALLAKEKQTSGDLQEqlytiqsirhfDPAKGFQ 689
Cdd:COG5022 1098 VKDLEVTNRN-----LVKPANVLQFIVAQMIKLNLLQEISKFLSQLVNTLEPVFQKLSVLQL-----------ELDGLFW 1161
|
410
....*....|....*
gi 704469152 690 HDSKENIPPKTPFKE 704
Cdd:COG5022 1162 EANLEALPSPPPFAA 1176
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
203-424 |
6.70e-05 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 46.59 E-value: 6.70e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 203 EVAQLEEKLSATEREKVEEKSDTEKLLE----YITELSGVAETVEKY--------KLdVAQMEETLMKKDQEIEILMDTL 270
Cdd:PRK10929 24 DEKQITQELEQAKAAKTPAQAEIVEALQsalnWLEERKGSLERAKQYqqvidnfpKL-SAELRQQLNNERDEPRSVPPNM 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 271 KTK--EEESFKIIEELTERCELLQQEKEK-------------ELSESRRKFLIMNAEIGDLKKKIVLEEQAHQKLLQ--- 332
Cdd:PRK10929 103 STDalEQEILQVSSQLLEKSRQAQQEQDRareisdslsqlpqQQTEARRQLNEIERRLQTLGTPNTPLAQAQLTALQaes 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 333 -KHEEMVSQLQQEkESSASMHQELLQLKDEVTSERH-LLQEELNDTMNELNKLhaKEKKAEKLVKRLEQeIKSQALELGQ 410
Cdd:PRK10929 183 aALKALVDELELA-QLSANNRQELARLRSELAKKRSqQLDAYLQALRNQLNSQ--RQREAERALESTEL-LAEQSGDLPK 258
|
250
....*....|....
gi 704469152 411 MEVKLKGKNAELEQ 424
Cdd:PRK10929 259 SIVAQFKINRELSQ 272
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
257-560 |
9.23e-05 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 45.69 E-value: 9.23e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 257 MKKdqeIEILmdTLKTKEEESFKIIEEL--TERCELLQQEKEKELSESRRKflimnaeIGDLKKKIVLEEQAHQKLLQKH 334
Cdd:PRK05771 6 MKK---VLIV--TLKSYKDEVLEALHELgvVHIEDLKEELSNERLRKLRSL-------LTKLSEALDKLRSYLPKLNPLR 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 335 EEMVSQLQQEKEssasmhqELLQLKDEVTSErhlLQEELNDTMNELNKLHAKEKKaeklvkrLEQEIKsqALElgqmevK 414
Cdd:PRK05771 74 EEKKKVSVKSLE-------ELIKDVEEELEK---IEKEIKELEEEISELENEIKE-------LEQEIE--RLE------P 128
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 415 LKGKNAELEQINEMRSNAVL--QIQEEHSNTLRKLGEtvaefesykKTVAEEISSLKLENTSLqeeVADLKKIGQVNLQL 492
Cdd:PRK05771 129 WGNFDLDLSLLLGFKYVSVFvgTVPEDKLEELKLESD---------VENVEYISTDKGYVYVV---VVVLKELSDEVEEE 196
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 704469152 493 LQEAENTKNKAKEEcaRMLLEVQTKLALKEAEAESTKESCLAHMAKLQEKLEERTEDLKRKLEMERSR 560
Cdd:PRK05771 197 LKKLGFERLELEEE--GTPSELIREIKEELEEIEKERESLLEELKELAKKYLEELLALYEYLEIELER 262
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
69-380 |
1.04e-04 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 45.66 E-value: 1.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 69 DLTLMKEKKKRNTL---EKEIRAL------VREYGEQSKKLEALEEAFAKMEAKFKSSVREKtsllANVACLKKQILEVT 139
Cdd:PLN02939 132 DLVGMIQNAEKNILllnQARLQALedlekiLTEKEALQGKINILEMRLSETDARIKLAAQEK----IHVEILEEQLEKLR 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 140 riNELLKSKLSEDGVEkkmSSLCQELMKLRNKRdgkekaaLAKQEDMEMklpevqrnLEHSKGEVAQLEEKLSATEREKV 219
Cdd:PLN02939 208 --NELLIRGATEGLCV---HSLSKELDVLKEEN-------MLLKDDIQF--------LKAELIEVAETEERVFKLEKERS 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 220 EEKSDTEKLleyitELSGVAETVEKYKLDVAQMEeTLMKKDQEIEILMDTLKTKEEESFKIIE---ELTERCELLqqekE 296
Cdd:PLN02939 268 LLDASLREL-----ESKFIVAQEDVSKLSPLQYD-CWWEKVENLQDLLDRATNQVEKAALVLDqnqDLRDKVDKL----E 337
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 297 KELSESR-RKFLIMNAEIgdLKKKIVLEEQAHQKllqKHEEMVSQLQQEKESSASMHQELLQLKDEvtSERHLLQEELND 375
Cdd:PLN02939 338 ASLKEANvSKFSSYKVEL--LQQKLKLLEERLQA---SDHEIHSYIQLYQESIKEFQDTLSKLKEE--SKKRSLEHPADD 410
|
....*
gi 704469152 376 TMNEL 380
Cdd:PLN02939 411 MPSEF 415
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
65-569 |
1.41e-04 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 45.49 E-value: 1.41e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 65 KPKKDLTLMKEKKKR-------NTLEkeIRALVREYGEQSKKLEALEEAFAKMEAKFK-------SSVREKTSLLANVAC 130
Cdd:pfam15921 388 KREKELSLEKEQNKRlwdrdtgNSIT--IDHLRRELDDRNMEVQRLEALLKAMKSECQgqmerqmAAIQGKNESLEKVSS 465
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 131 LKKQiLEVTR------INELLKSKLSEDGVEKKMSSLCQELMKLRNKRDGKEKAALAKQEDMEMKLPEVQR------NLE 198
Cdd:pfam15921 466 LTAQ-LESTKemlrkvVEELTAKKMTLESSERTVSDLTASLQEKERAIEATNAEITKLRSRVDLKLQELQHlknegdHLR 544
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 199 HSKGEVAQLeeKLSATEREKVEEKsdTEKLLEYITELSGV-AETVEKYKLDVAQMEETLMKKD---QEIEILMDTLKTKe 274
Cdd:pfam15921 545 NVQTECEAL--KLQMAEKDKVIEI--LRQQIENMTQLVGQhGRTAGAMQVEKAQLEKEINDRRlelQEFKILKDKKDAK- 619
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 275 eesfkiIEELTERCELLQQEKEKEL---SESRRKFLIMNAEIGDLKKKIVLEEQAHQKLLQKHEEMVSQLQQEKESSASM 351
Cdd:pfam15921 620 ------IRELEARVSDLELEKVKLVnagSERLRAVKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETT 693
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 352 HQEL-LQLKDEvtserhllQEELNDTMNELNKLHAKEKKAEKLVKRLEQEIKSQALELGQMEVKLKGKNAELEQINEMRS 430
Cdd:pfam15921 694 TNKLkMQLKSA--------QSELEQTRNTLKSMEGSDGHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNANKEKH 765
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 431 NavlqIQEEHSntlrKLGETVAEFESYKKTVAEEISSLKLENTSLQEEVADLK-KIGQVNLQLlQEAENTKNKAKEECAR 509
Cdd:pfam15921 766 F----LKEEKN----KLSQELSTVATEKNKMAGELEVLRSQERRLKEKVANMEvALDKASLQF-AECQDIIQRQEQESVR 836
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 510 mlLEVQTKLALKEAE-----------------------------AESTKESCLAHMAKLQEKLEERTEDLKRKLEMERSR 560
Cdd:pfam15921 837 --LKLQHTLDVKELQgpgytsnssmkprllqpasftrthsnvpsSQSTASFLSHHSRKTNALKEDPTRDLKQLLQELRSV 914
|
....*....
gi 704469152 561 KHEDVTTSL 569
Cdd:pfam15921 915 INEEPTVQL 923
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
68-373 |
2.22e-04 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 44.67 E-value: 2.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 68 KDLTLMKEKKKRNTLEKEIRALVREYGEQSKKLEALEEAFAKMEAKfkssvrektsllanvacLKKQILEVTRINELLKs 147
Cdd:TIGR02169 214 QALLKEKREYEGYELLKEKEALERQKEAIERQLASLEEELEKLTEE-----------------ISELEKRLEEIEQLLE- 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 148 klsedgvekkmsslcQELMKLRNKRDGKEKAALAKQEDMEMKLPEVQRNLEHSKGEVAQLEEKLSATEREKVEEKSDTEK 227
Cdd:TIGR02169 276 ---------------ELNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEE 340
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 228 LLEYITELSGVAETVEKYKLDVAQMEETLMKKDQEIEILMDTLKTKEEESFKIIEELTERCELLQQEKEKELSESRR--- 304
Cdd:TIGR02169 341 LEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRlse 420
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 704469152 305 KFLIMNAEIGDLKKKIVLEEQAHQKLLQKHEEMVSQLQQEKESSASMHQELLQLK---DEVTSERHLLQEEL 373
Cdd:TIGR02169 421 ELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKeeyDRVEKELSKLQREL 492
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
131-471 |
2.37e-04 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 44.63 E-value: 2.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 131 LKKQILEVTRINELLKSKLSEDGVEKkmsslcQELMKLRNKRDGKEKAALAKQEDMEMKLPEVQRNLEHSKGEVAQLEEK 210
Cdd:TIGR04523 216 LESQISELKKQNNQLKDNIEKKQQEI------NEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQ 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 211 LSA--TEREKVEEKSDTEKLLEYITELSGVAETVEKYKLDVAQMEETLMKKDQEIEILMDTLKTKEEESFKIIEELTERC 288
Cdd:TIGR04523 290 LNQlkSEISDLNNQKEQDWNKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEKQ 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 289 ELLQQEKeKELSESRRKFLIMNAEIGDLKKKIvleeQAHQKLLQKHEEMVSQLQQEKESSASMHQELLQLKDEVTSERHL 368
Cdd:TIGR04523 370 NEIEKLK-KENQSYKQEIKNLESQINDLESKI----QNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKD 444
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 369 LQEELNDTMNELNKLHAKEKKAEKLVKRLEQEIKSQALELGQMEVKLKGKNAELEQINEMRSNAVLQIQEEHSNtLRKLG 448
Cdd:TIGR04523 445 LTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKK-ISSLK 523
|
330 340
....*....|....*....|...
gi 704469152 449 ETVAEFESYKKTVAEEISSLKLE 471
Cdd:TIGR04523 524 EKIEKLESEKKEKESKISDLEDE 546
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
217-561 |
2.70e-04 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 44.34 E-value: 2.70e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 217 EKVEEKSDTEKLLEYITELSgvAETVEKYKLDVAQMEETLMKKDQEIEILMDTLKTKEEESFKIIEEltercELLQQEKE 296
Cdd:pfam17380 234 EKMERRKESFNLAEDVTTMT--PEYTVRYNGQTMTENEFLNQLLHIVQHQKAVSERQQQEKFEKMEQ-----ERLRQEKE 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 297 KELSESRRKFLIMNAEIGdlkKKIVLEEQAhqKLLQKHEEMVSQLQQEKESsasmhqelLQLKDEVTSERHLLQEELN-- 374
Cdd:pfam17380 307 EKAREVERRRKLEEAEKA---RQAEMDRQA--AIYAEQERMAMERERELER--------IRQEERKRELERIRQEEIAme 373
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 375 -DTMNELNKLH-AKEKKAEKLVKRLEQEIKSQALElGQMEVKLKGKNAELEQINEMRSNA----VLQIQEEHSNTLRKLG 448
Cdd:pfam17380 374 iSRMRELERLQmERQQKNERVRQELEAARKVKILE-EERQRKIQQQKVEMEQIRAEQEEArqreVRRLEEERAREMERVR 452
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 449 ETVAEFESYKKTVAEEISSLKLENTSLQEEVADLKKIGQVNLQLLQE--AENTKNKAKEECARMLLE---------VQTK 517
Cdd:pfam17380 453 LEEQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRKILEKelEERKQAMIEEERKRKLLEkemeerqkaIYEE 532
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 704469152 518 LALKEAEAESTKESCLAHMAKLQEKLEERTEDLKRKLEMERSRK 561
Cdd:pfam17380 533 ERRREAEEERRKQQEMEERRRIQEQMRKATEERSRLEAMERERE 576
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
408-619 |
3.20e-04 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 44.26 E-value: 3.20e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 408 LGQMEVKLKGKNAELEQINEMRSNAVLQ------IQEEHSNTL----------RKLGETVAEFESYKKTVAEEISSLKLE 471
Cdd:PRK02224 208 LNGLESELAELDEEIERYEEQREQARETrdeadeVLEEHEERReeletleaeiEDLRETIAETEREREELAEEVRDLRER 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 472 NTSLQEEVADLK---KIGQVNLQLLQEAENTKNKAKEECARMLLEVQTKLALKEAEAESTKESCLAHMAKLQEKLEERtE 548
Cdd:PRK02224 288 LEELEEERDDLLaeaGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEA-A 366
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 704469152 549 DLKRKLEMERS--RKHEDVTTSLKEEVKTWRKLYEDLhnktkpfQQQLDAYEAEKNVLLNEHGAAQEELNKLS 619
Cdd:PRK02224 367 ELESELEEAREavEDRREEIEELEEEIEELRERFGDA-------PVDLGNAEDFLEELREERDELREREAELE 432
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
72-484 |
3.20e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 44.28 E-value: 3.20e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 72 LMKEKKKRNTLEKEIRALVREYGEQSKKLEALEEAFAKMEakfkssvrEKTSLLANVACLKKQILEvtriNELLKSKLSE 151
Cdd:PRK03918 333 LEEKEERLEELKKKLKELEKRLEELEERHELYEEAKAKKE--------ELERLKKRLTGLTPEKLE----KELEELEKAK 400
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 152 DGVEKKMSSLCQELMKLRNKRdGKEKAALAKQEDMEMKLPEVQRNL--EHSKGEVAQLEEKLSATEREKVEEKSDTEKLL 229
Cdd:PRK03918 401 EEIEEEISKITARIGELKKEI-KELKKAIEELKKAKGKCPVCGRELteEHRKELLEEYTAELKRIEKELKEIEEKERKLR 479
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 230 EYITELsgvaetvekykldvaqmeETLMKKDQEIEILMDTLKTKEEESFKIIEELTERCEllqqEKEKELSESRRKFLIM 309
Cdd:PRK03918 480 KELREL------------------EKVLKKESELIKLKELAEQLKELEEKLKKYNLEELE----KKAEEYEKLKEKLIKL 537
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 310 NAEIGDLKKKIVLEEQAHQKLlqkhEEMVSQLQQEKESSASMHQELLQLKDEVTSERHLLQEELNDTMNELNKLhakeKK 389
Cdd:PRK03918 538 KGEIKSLKKELEKLEELKKKL----AELEKKLDELEEELAELLKELEELGFESVEELEERLKELEPFYNEYLEL----KD 609
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 390 AEKLVKRLEQEIKSQALELGQMEVKLKGKNAELE----QINEMRSNAVLQIQEEHSNTLRKLGETVAEFESYKKTVAEEI 465
Cdd:PRK03918 610 AEKELEREEKELKKLEEELDKAFEELAETEKRLEelrkELEELEKKYSEEEYEELREEYLELSRELAGLRAELEELEKRR 689
|
410
....*....|....*....
gi 704469152 466 SSLKLENTSLQEEVADLKK 484
Cdd:PRK03918 690 EEIKKTLEKLKEELEEREK 708
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
360-531 |
3.45e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 43.67 E-value: 3.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 360 DEVTSERHLLQEELNDTMNELNKLHAKEKKAEKLVKRLEQEIKSQALELGQMEVKLKGKNAEL-EQINEM---------- 428
Cdd:COG3883 26 SELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELgERARALyrsggsvsyl 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 429 --------------RSNAVLQIQEEHSNTLRKLGETVAEFESYKKTVAEEISSLKLENTSLQEEVADLKKIGQVNLQLLQ 494
Cdd:COG3883 106 dvllgsesfsdfldRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAELEAQQAEQEALLA 185
|
170 180 190
....*....|....*....|....*....|....*..
gi 704469152 495 EAENTKNKAKEECARMLLEVQTKLALKEAEAESTKES 531
Cdd:COG3883 186 QLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAA 222
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
270-556 |
4.00e-04 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 43.73 E-value: 4.00e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 270 LKTKEEESFKIIEELTERCELLQQEKEKELSESRRKFLIMNAEIGDLKKKIVLEEQAHQKLLQKHEEMVSQLQQEKESSA 349
Cdd:pfam07888 32 LQNRLEECLQERAELLQAQEAANRQREKEKERYKRDREQWERQRRELESRVAELKEELRQSREKHEELEEKYKELSASSE 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 350 SMHQELLQLKD----------EVTSERHLLQEELNDTMNELNKLHAKEKKAEKLVKRLEQEIKSQALELGQMEVKLKGKN 419
Cdd:pfam07888 112 ELSEEKDALLAqraahearirELEEDIKTLTQRVLERETELERMKERAKKAGAQRKEEEAERKQLQAKLQQTEEELRSLS 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 420 AELEQIN---EMRSNAVLQIQEEHSNTLRKLGeTVAEFESYKKTVAEEISSLKLENTSLQEEVADLKKIGQVNLQLLQEA 496
Cdd:pfam07888 192 KEFQELRnslAQRDTQVLQLQDTITTLTQKLT-TAHRKEAENEALLEELRSLQERLNASERKVEGLGEELSSMAAQRDRT 270
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 704469152 497 ENTKNKAKEECARMLLEV-QTKLALKEAEAESTKE--SCLAHMAKLQEKLEERTEDLKRKLEM 556
Cdd:pfam07888 271 QAELHQARLQAAQLTLQLaDASLALREGRARWAQEreTLQQSAEADKDRIEKLSAELQRLEER 333
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
321-425 |
4.17e-04 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 43.61 E-value: 4.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 321 VLEEQAHQKLLQKHEEMVSQLQQ-EKESSASMHQELLQLKDEVTSERHLLQEELNDTMNELNKLHAK--------EKKAE 391
Cdd:PRK12704 24 VRKKIAEAKIKEAEEEAKRILEEaKKEAEAIKKEALLEAKEEIHKLRNEFEKELRERRNELQKLEKRllqkeenlDRKLE 103
|
90 100 110
....*....|....*....|....*....|....
gi 704469152 392 KLVKRlEQEIKSQALELGQMEVKLKGKNAELEQI 425
Cdd:PRK12704 104 LLEKR-EEELEKKEKELEQKQQELEKKEEELEEL 136
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
209-672 |
5.90e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 43.22 E-value: 5.90e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 209 EKLSATEREKVEEKSDTEKLLEYITELSGVAETVEKYKLDVAQMEETLMKKDQEIEILMDTLKTKEEEsfKIIEELTERC 288
Cdd:COG4717 71 KELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLYQELEALE--AELAELPERL 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 289 ELLQQeKEKELSESRRKFLIMNAEIGDLKKKIvleEQAHQKLLQKHEEMVSQLQQEkessasmHQELLQLKDEVTSERHL 368
Cdd:COG4717 149 EELEE-RLEELRELEEELEELEAELAELQEEL---EELLEQLSLATEEELQDLAEE-------LEELQQRLAELEEELEE 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 369 LQEELNDTMNELNKLhAKEKKAEKLVKRLEQE------------IKSQALELGQMEVKLKGKNAELEQINEMRSNAVLQI 436
Cdd:COG4717 218 AQEELEELEEELEQL-ENELEAAALEERLKEArlllliaaallaLLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLARE 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 437 QEEHSNTLRKLGETVAEFESYKKTVAEEISSLKLENTSLQEEVADLKKIGQVNLQLLQEAENTKNKAKEECARmlLEVQT 516
Cdd:COG4717 297 KASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELE--QEIAA 374
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 517 KLALKEAEAESTKESCLAHMAKLQEkLEERTEDLKRKLEMERSRKHEDVTTSLKEEVKtwrklyEDLHNktkpFQQQLDA 596
Cdd:COG4717 375 LLAEAGVEDEEELRAALEQAEEYQE-LKEELEELEEQLEELLGELEELLEALDEEELE------EELEE----LEEELEE 443
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 704469152 597 YEAEKNVLLNEHGAAQEELNKL--SDAYAKLLGHQNQkqkikhvmkLKEENTHLKQDVSKLRALLAKEKQTSGDLQEQ 672
Cdd:COG4717 444 LEEELEELREELAELEAELEQLeeDGELAELLQELEE---------LKAELRELAEEWAALKLALELLEEAREEYREE 512
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
193-625 |
8.12e-04 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 42.72 E-value: 8.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 193 VQRNLEHSKGEVAQLEEKLsaterEKVEEKSDTEKLLEYITELSGVAETVEKYKLDVAQMEETLMKKD----------QE 262
Cdd:PRK02224 178 VERVLSDQRGSLDQLKAQI-----EEKEEKDLHERLNGLESELAELDEEIERYEEQREQARETRDEADevleeheerrEE 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 263 IEIL---MDTLKTKEEESFKIIEELTERCELLQQEKEkELsESRRKFLIMNAEIGDLKKKIVLeeqAHQKLLQKHEEMVS 339
Cdd:PRK02224 253 LETLeaeIEDLRETIAETEREREELAEEVRDLRERLE-EL-EEERDDLLAEAGLDDADAEAVE---ARREELEDRDEELR 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 340 QLQQEKESSASMHQE----LLQLKDEVTSERHLLQEELNDTMNELNKLHAKEKKAEKLVKRLEQEIKSQALELGQMEVKL 415
Cdd:PRK02224 328 DRLEECRVAAQAHNEeaesLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDL 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 416 KGKNAELEqinemrsnavlQIQEEHSNTLRKLGETVAEFESYKKTVAeeisslklENTSLQEEvADLKKIGQ-VNLQLLQ 494
Cdd:PRK02224 408 GNAEDFLE-----------ELREERDELREREAELEATLRTARERVE--------EAEALLEA-GKCPECGQpVEGSPHV 467
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 495 EAENTKNKAKEECARMLLEVQTKLALKEAEAESTKEscLAHMAKLQEKLEERTEDLKRKLEMERSRKHEDVTT------- 567
Cdd:PRK02224 468 ETIEEDRERVEELEAELEDLEEEVEEVEERLERAED--LVEAEDRIERLEERREDLEELIAERRETIEEKRERaeelrer 545
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 568 --SLKEEVKTWRKLYEDLHNKTKPFQQQLDAYEAEknvlLNEHGAAQEELNKLSDAYAKL 625
Cdd:PRK02224 546 aaELEAEAEEKREAAAEAEEEAEEAREEVAELNSK----LAELKERIESLERIRTLLAAI 601
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
192-564 |
1.28e-03 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 42.27 E-value: 1.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 192 EVQRNLEHSKGEVAQLEEKLSATEREKVEEKSDTEKLLEYITELSGVAETVEKYKLDVAQMEETLMKKDQEIEILMDTLK 271
Cdd:pfam02463 669 SELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEE 748
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 272 TKEEESFKIIEELTERCELLQQEKEKELSESRRKFLI-MNAEIGDLKKKIVLEEQAHQKLLQKHEEMVSQLQQEKESSAS 350
Cdd:pfam02463 749 EEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKlKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEE 828
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 351 MHQELLQLKDEVTSERHLLQEELNDTMNELNklhakEKKAEKLVKRLEQEIKSQALELGQMEVKLKGKNAELEQINEMRS 430
Cdd:pfam02463 829 KIKEEELEELALELKEEQKLEKLAEEELERL-----EEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELE 903
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 431 NAVLQIQEEHSNTLRKLGETVAEFESYKKTVAEEISSLKLENTSLQEEVADLKKIGQVNLQLLQEAENTKNKAKEECARM 510
Cdd:pfam02463 904 EESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKEKEENNKEEEEERNKRLLLAKEELGKVNLMAIEEF 983
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 704469152 511 LLEVQTKLALKEAEAESTKEsclaHMAKLQEKLEERTEDLKRKLEMERSRKHED 564
Cdd:pfam02463 984 EEKEERYNKDELEKERLEEE----KKKLIRAIIEETCQRLKEFLELFVSINKGW 1033
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
197-382 |
1.35e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.21 E-value: 1.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 197 LEHSKGEVAQLEEKLSATEREKVEEKSDTEKLLEYITELSGVAETVEkYKLDVAQMEETLMKKDQEIEILmdtlktkeEE 276
Cdd:COG4913 612 LAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSW-DEIDVASAEREIAELEAELERL--------DA 682
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 277 SFKIIEELTERCELLQQEKEkELSESRRKfliMNAEIGDLKKKI---VLEEQAHQKLLQKHEEMVSQLQQE--------- 344
Cdd:COG4913 683 SSDDLAALEEQLEELEAELE-ELEEELDE---LKGEIGRLEKELeqaEEELDELQDRLEAAEDLARLELRAlleerfaaa 758
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 704469152 345 --KESSASMHQELLQLKDEVTSERHLLQEELNDTMNELNK 382
Cdd:COG4913 759 lgDAVERELRENLEERIDALRARLNRAEEELERAMRAFNR 798
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
338-644 |
1.56e-03 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 41.81 E-value: 1.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 338 VSQLQQEKESSASMHQELLQLKDEVTSERHLLQEELNDTMNELNKLHAKE-----KKAEKLVKRLEQEiKSQALElgQME 412
Cdd:PLN02939 83 VMELPQKSTSSDDDHNRASMQRDEAIAAIDNEQQTNSKDGEQLSDFQLEDlvgmiQNAEKNILLLNQA-RLQALE--DLE 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 413 VKLKGKNAELEQIN--EMR-------------SNAVLQIQEEHSNTLRK-LGETVAEFESYKKTVAEEISSLKLENTSLQ 476
Cdd:PLN02939 160 KILTEKEALQGKINilEMRlsetdariklaaqEKIHVEILEEQLEKLRNeLLIRGATEGLCVHSLSKELDVLKEENMLLK 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 477 EEVADLKKigqvnlQLLQEAENTKNKAKEECARMLLEVQTKlalkeaEAESTKESCLAHMAKL----QEKLEERTEDLKR 552
Cdd:PLN02939 240 DDIQFLKA------ELIEVAETEERVFKLEKERSLLDASLR------ELESKFIVAQEDVSKLsplqYDCWWEKVENLQD 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 553 KLemERSRKHEDVTTSLKEEvktwrklYEDLHNKTKPFQQQLDA-----YEAEKNVLLNEHGAAQEELNKLSDA----YA 623
Cdd:PLN02939 308 LL--DRATNQVEKAALVLDQ-------NQDLRDKVDKLEASLKEanvskFSSYKVELLQQKLKLLEERLQASDHeihsYI 378
|
330 340
....*....|....*....|..
gi 704469152 624 KLlgHQNQKQKIKHVM-KLKEE 644
Cdd:PLN02939 379 QL--YQESIKEFQDTLsKLKEE 398
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
372-563 |
1.64e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 41.35 E-value: 1.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 372 ELNDTMNELNKLHAKEKKAEKLVKRLEQEIKSQALELGQMEVKLKGKNAELEQINEmrsnAVLQIQEEHSNTLRKLGETV 451
Cdd:COG3883 17 QIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQA----EIAEAEAEIEERREELGERA 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 452 AefESYKKTVAEEISSLKLENTSLQE---EVADLKKIGQVNLQLLQEAENTKNKAKEEcARMLLEVQTKLALKEAEAEST 528
Cdd:COG3883 93 R--ALYRSGGSVSYLDVLLGSESFSDfldRLSALSKIADADADLLEELKADKAELEAK-KAELEAKLAELEALKAELEAA 169
|
170 180 190
....*....|....*....|....*....|....*
gi 704469152 529 KESCLAHMAKLQEKLEERTEDLKRKLEMERSRKHE 563
Cdd:COG3883 170 KAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAE 204
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
260-438 |
1.77e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 41.54 E-value: 1.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 260 DQEIEILMDTLKTKEE--ESFKI---IEELTERCELLQQEK---EKELSESRRKFLIMNAEIGDLKKKI---------VL 322
Cdd:COG3206 181 EEQLPELRKELEEAEAalEEFRQkngLVDLSEEAKLLLQQLselESQLAEARAELAEAEARLAALRAQLgsgpdalpeLL 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 323 EEQAHQKLLQKHEEMVSQLQQEKESSASMHQELLQLKDEVTSERHLLQEELNDTMNELNKLHAKEKKAEKLVKRLEQEIK 402
Cdd:COG3206 261 QSPVIQQLRAQLAELEAELAELSARYTPNHPDVIALRAQIAALRAQLQQEAQRILASLEAELEALQAREASLQAQLAQLE 340
|
170 180 190
....*....|....*....|....*....|....*.
gi 704469152 403 SQALELGQMEVKLKGKNAELEQINEMRSNAVLQIQE 438
Cdd:COG3206 341 ARLAELPELEAELRRLEREVEVARELYESLLQRLEE 376
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
444-673 |
1.85e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 41.59 E-value: 1.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 444 LRKLGETVAEFESYKKTVAEEISSLKLENTSLQEEVADL-KKIG--QVNLQLLQEAENTKNKAKEECARMLLEVQTKLAL 520
Cdd:TIGR02169 676 LQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDAsRKIGeiEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIEN 755
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 521 KEAEAEsTKESCLAHMAKLQEKLEERTEDLKRKLEMERSRKHEDVTTSLKEEVKTWRKLYEDLHNKTKPFQQQLDAYEAE 600
Cdd:TIGR02169 756 VKSELK-ELEARIEELEEDLHKLEEALNDLEARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKE 834
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 704469152 601 KNVLLNEHGAAQEELNKLSDAYAKLLGH-----QNQKQKIKHVMKLKEENTHLKQDVSKLRALLAKEKQTSGDLQEQL 673
Cdd:TIGR02169 835 IQELQEQRIDLKEQIKSIEKEIENLNGKkeeleEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQI 912
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
220-420 |
2.02e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 40.97 E-value: 2.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 220 EEKSDTEKLLEYITELSGVAETVEKYKLDVAQMEETLMKKDQEIEILMDTLKTKEEEsfkiIEELTERCELLQQEKEKEL 299
Cdd:COG3883 17 QIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAE----IAEAEAEIEERREELGERA 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 300 SESRRK--------FLIMNAEIGDLKKKIVLEEQ---AHQKLLQKHEEMVSQLQQEKESSASMHQELLQLKDEVTSERHL 368
Cdd:COG3883 93 RALYRSggsvsyldVLLGSESFSDFLDRLSALSKiadADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAE 172
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 704469152 369 LQEELNDTMNELNKLHAKEKKAEKLVKRLEQEIKSQALELGQMEVKLKGKNA 420
Cdd:COG3883 173 LEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAA 224
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
148-624 |
2.13e-03 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 41.25 E-value: 2.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 148 KLSEDgvEKKMSSLCQELMKLRNKRDGKEKAALAKQEDMEMKLPEVQRNLEHSKGEVAQLEEKlsaterekveEKSDTEK 227
Cdd:pfam05483 216 KLKED--HEKIQHLEEEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKANQLEEK----------TKLQDEN 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 228 LLEYITELSGVAETVEKYKLDVAQMEETLMKKDQEIEIlmdtlktkeeeSFKIIEELTErcellqqEKEKELSESRRKFL 307
Cdd:pfam05483 284 LKELIEKKDHLTKELEDIKMSLQRSMSTQKALEEDLQI-----------ATKTICQLTE-------EKEAQMEELNKAKA 345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 308 IMNAEIGDLKKKIVLEEQ---AHQKLLQKHEEMVSQLQQEKESSASMHQELLQLKDEVTSERhllqEELNDTMNELNKLH 384
Cdd:pfam05483 346 AHSFVVTEFEATTCSLEEllrTEQQRLEKNEDQLKIITMELQKKSSELEEMTKFKNNKEVEL----EELKKILAEDEKLL 421
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 385 AKEKKAEKLVKRLEQEIKSQALELGQMEVKLKGKNAELeqinemrsnAVLQIQEEHSNTLRKLGETVAEFESYKKT-VAE 463
Cdd:pfam05483 422 DEKKQFEKIAEELKGKEQELIFLLQAREKEIHDLEIQL---------TAIKTSEEHYLKEVEDLKTELEKEKLKNIeLTA 492
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 464 EISSLKLENTSLQEEVADLKkigqVNLQLLQEAENTKNKAKEECARMLLEVQTKLALKEAEAESTKESCLAHMAKLQEKL 543
Cdd:pfam05483 493 HCDKLLLENKELTQEASDMT----LELKKHQEDIINCKKQEERMLKQIENLEEKEMNLRDELESVREEFIQKGDEVKCKL 568
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 544 EeRTEDLKRKLEMERSRKH------EDVTTSLKEEVKTWRKLYEDLHNKTKPFQQ-------QLDAYEAEKNVLLNEHGA 610
Cdd:pfam05483 569 D-KSEENARSIEYEVLKKEkqmkilENKCNNLKKQIENKNKNIEELHQENKALKKkgsaenkQLNAYEIKVNKLELELAS 647
|
490
....*....|....
gi 704469152 611 AQEELNKLSDAYAK 624
Cdd:pfam05483 648 AKQKFEEIIDNYQK 661
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
331-433 |
3.22e-03 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 40.84 E-value: 3.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 331 LQKHEEMVSQLQQEKEssasmhqELLQLKDEVTSER-HLLQEELNDTMNELNKLHAK---EKKAEKLVKRLEQEIKSQAL 406
Cdd:COG0542 413 LDELERRLEQLEIEKE-------ALKKEQDEASFERlAELRDELAELEEELEALKARweaEKELIEEIQELKEELEQRYG 485
|
90 100
....*....|....*....|....*..
gi 704469152 407 ELGQMEVKLKGKNAELEQINEMRSNAV 433
Cdd:COG0542 486 KIPELEKELAELEEELAELAPLLREEV 512
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
175-475 |
3.80e-03 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 40.58 E-value: 3.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 175 KEKAALAKQEDMEMKLPEVQRNLEHSKGEVAQLEEKLSATEREKVEEKSDTEKLLEYITELsgvAETVEKYKLDVAQMEE 254
Cdd:pfam10174 448 KERIIERLKEQREREDRERLEELESLKKENKDLKEKVSALQPELTEKESSLIDLKEHASSL---ASSGLKKDSKLKSLEI 524
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 255 TLMKKDQEIEILMDTLKTKE--EESFKIIEELTERCELLQQEKEKELSESRRK----------FLIMNAEIGDLKKKIVL 322
Cdd:pfam10174 525 AVEQKKEECSKLENQLKKAHnaEEAVRTNPEINDRIRLLEQEVARYKEESGKAqaeverllgiLREVENEKNDKDKKIAE 604
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 323 EEQAHQKLLQKHEEMVSQL----QQEKESSASMHQELLQLKDEVTSERHLLQeeLNDTMNELNKLHAKEKKAEKLVKRLE 398
Cdd:pfam10174 605 LESLTLRQMKEQNKKVANIkhgqQEMKKKGAQLLEEARRREDNLADNSQQLQ--LEELMGALEKTRQELDATKARLSSTQ 682
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 704469152 399 QEIKSQALELGQMEVKlkgKNAELEQINEMRSNAVL-QIQEEHSN-TLRKLGetvaefESYKKTVAEEISSLKLENTSL 475
Cdd:pfam10174 683 QSLAEKDGHLTNLRAE---RRKQLEEILEMKQEALLaAISEKDANiALLELS------SSKKKKTQEEVMALKREKDRL 752
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
50-658 |
4.79e-03 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 40.49 E-value: 4.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 50 RRLAALGTTPSKQTLKPKKDLTLMKEKKKRNTLEKEIRALVREYGEQSKKlealeeafaKMEAKFKSSVREktslLANVA 129
Cdd:pfam15921 92 RRLNESNELHEKQKFYLRQSVIDLQTKLQEMQMERDAMADIRRRESQSQE---------DLRNQLQNTVHE----LEAAK 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 130 CLKKQILE--VTRINELLKSKLSEDGVEKKMSSLCQELMKLRNKRDGKEKAALAKQ-----EDMEMKLPEVQRNLEHSKG 202
Cdd:pfam15921 159 CLKEDMLEdsNTQIEQLRKMMLSHEGVLQEIRSILVDFEEASGKKIYEHDSMSTMHfrslgSAISKILRELDTEISYLKG 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 203 EVAQLEEKLSATErekveeksdteklleyitelsgvAETVEKYKLDVAQMEETLMKKDQEIEILMDTLKTKEEESFKIIE 282
Cdd:pfam15921 239 RIFPVEDQLEALK-----------------------SESQNKIELLLQQHQDRIEQLISEHEVEITGLTEKASSARSQAN 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 283 ELTERCELLQQEKEKELSESRRKFLIMNAEIGDLKKKIvleeqahQKLLQKHEEMVSQLQQEKESSASMHQELLQLKDEV 362
Cdd:pfam15921 296 SIQSQLEIIQEQARNQNSMYMRQLSDLESTVSQLRSEL-------REAKRMYEDKIEELEKQLVLANSELTEARTERDQF 368
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 363 TSERHLLQEELNDTMNELNK----LHAKEKKAEKL------------------------VKRLEQEIKSQALEL-GQMEV 413
Cdd:pfam15921 369 SQESGNLDDQLQKLLADLHKrekeLSLEKEQNKRLwdrdtgnsitidhlrrelddrnmeVQRLEALLKAMKSECqGQMER 448
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 414 KL---KGKNAELEQINEMRSNAvlqiqEEHSNTLRKLGETVA----EFESYKKTVAEEISSLKLENTSLQEEVADLKKI- 485
Cdd:pfam15921 449 QMaaiQGKNESLEKVSSLTAQL-----ESTKEMLRKVVEELTakkmTLESSERTVSDLTASLQEKERAIEATNAEITKLr 523
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 486 GQVNLQlLQEAENTKNK------AKEECARMLLEVQTK---LALKEAEAESTKESCLAH----MAKLQEKLEERTEDLKR 552
Cdd:pfam15921 524 SRVDLK-LQELQHLKNEgdhlrnVQTECEALKLQMAEKdkvIEILRQQIENMTQLVGQHgrtaGAMQVEKAQLEKEINDR 602
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 553 KLEMERSRKHEDVTTSLKEEVKTWRKLYE----DLHNKTKPFQQQLDAYEAEKNVLLNEHGAAQEELNKLSDAYAKL-LG 627
Cdd:pfam15921 603 RLELQEFKILKDKKDAKIRELEARVSDLElekvKLVNAGSERLRAVKDIKQERDQLLNEVKTSRNELNSLSEDYEVLkRN 682
|
650 660 670
....*....|....*....|....*....|....*.
gi 704469152 628 HQNQKQKI-----KHVMKLKEENTHLKQDVSKLRAL 658
Cdd:pfam15921 683 FRNKSEEMetttnKLKMQLKSAQSELEQTRNTLKSM 718
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
161-361 |
5.75e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 40.28 E-value: 5.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 161 LCQELMKLRNKRDGKEK-AALAKQEDMEMKLPEVQRNLEHSKGEVAQLEEKLSATEREKVEEKSDTEKLLEYITELSGva 239
Cdd:COG4913 260 LAERYAAARERLAELEYlRAALRLWFAQRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIRGNGG-- 337
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 240 ETVEKYKLDVAQMEETLMKKDQEIEILMDTLKTKEEESFKIIEELTERCELLQQEKEKElsesrrkflimNAEIGDLKKK 319
Cdd:COG4913 338 DRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEAL-----------EEELEALEEA 406
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 704469152 320 IVLEEQAHQKLLQKHEEMVSQLQQEKESSASMHQELLQLKDE 361
Cdd:COG4913 407 LAEAEAALRDLRRELRELEAEIASLERRKSNIPARLLALRDA 448
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
175-553 |
5.91e-03 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 39.95 E-value: 5.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 175 KEKAALAKQEDMEMKLPEVQRNLEHSKGEVAQLEEKlSATEREKVEEKSDTEKLLEYITELSGVAETVEKYKLDVAQMEE 254
Cdd:pfam02463 170 KKKEALKKLIEETENLAELIIDLEELKLQELKLKEQ-AKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRD 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 255 TLMKKDQEIEILMDTLKTKEEESFKIIEE-----LTERCELLQQEKEKELSESRRKFLIMNAEIGDLKKKIVLEEQAHQK 329
Cdd:pfam02463 249 EQEEIESSKQEIEKEEEKLAQVLKENKEEekekkLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAEK 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 330 LLQKHEEMVSQLQQEKESsasmHQELLQLKDEVTSERHLLQEELNDTMNELNKLHAKEKKAEKLVKRLEQEIKSQALElg 409
Cdd:pfam02463 329 ELKKEKEEIEELEKELKE----LEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSE-- 402
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 410 qmEVKLKGKNAELEQINEMRSNAVLQIQEEHSNTLRKLGETVAEFESYKKTVAEEISSLKLENTSLQEEVADLKKIGQVN 489
Cdd:pfam02463 403 --EEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLV 480
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 704469152 490 LQLLQEAENTKNKAKEECARMLLEVQTKLALKEAEAESTKESCLAHMAKLQEKLEERTEDLKRK 553
Cdd:pfam02463 481 KLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVA 544
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
74-500 |
6.55e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 39.92 E-value: 6.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 74 KEKKKRNTLEKEIRALVREYGEQSKKLEALEEAFAKMEAKFKSSVREKTSLLANVACLKKQILEVTR-INELLKSKLSED 152
Cdd:COG1196 327 ELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRaAAELAAQLEELE 406
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 153 GVEKKMSSLCQELMKLRNKRDGKEKAALAKQEDMEMKLPEVQRNLEHSKGEVAQLEEKLSATEREKVEEKSDTEKLLEYI 232
Cdd:COG1196 407 EAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEEL 486
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 233 TELSGVAETVEKYKLDVAQMEETLMKKDQEIEILMDTLKTKEEESFKIIEELTERCELL----------------QQEKE 296
Cdd:COG1196 487 AEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAaalqnivveddevaaaAIEYL 566
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 297 KELSESRRKFLIMNA-----------EIGDLKKKIVL------EEQAHQKLLQKHEEMVSQLQQEKESSASMHQELLQLK 359
Cdd:COG1196 567 KAAKAGRATFLPLDKiraraalaaalARGAIGAAVDLvasdlrEADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRL 646
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 360 DEVTSERHLLQEELNDTMNELNKLHAKEKKAEKLVKRLEQEIKSQALELGQMEVKLKGKNAELEQINEMRSNAVLQIQEE 439
Cdd:COG1196 647 REVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEAL 726
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 704469152 440 HSNTLRKLGETVAEFESYKKTVAEEISSLKLENTS---LQEEVADLKK----IGQVNLQLLQEAENTK 500
Cdd:COG1196 727 EEQLEAEREELLEELLEEEELLEEEALEELPEPPDleeLERELERLEReieaLGPVNLLAIEEYEELE 794
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
491-586 |
6.90e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 39.76 E-value: 6.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 491 QLLQEAENTKNKAKEECarmLLEVQTKLALKEAEAESTKESCLAHMAKLQEKLEERTEDLKRKLEMERSRKHE-----DV 565
Cdd:PRK12704 42 RILEEAKKEAEAIKKEA---LLEAKEEIHKLRNEFEKELRERRNELQKLEKRLLQKEENLDRKLELLEKREEElekkeKE 118
|
90 100
....*....|....*....|.
gi 704469152 566 TTSLKEEVKTWRKLYEDLHNK 586
Cdd:PRK12704 119 LEQKQQELEKKEEELEELIEE 139
|
|
| CCDC73 |
pfam15818 |
Coiled-coil domain-containing protein 73 family; CCDC73 is a family of eukaryotic coiled-coil ... |
259-572 |
7.14e-03 |
|
Coiled-coil domain-containing protein 73 family; CCDC73 is a family of eukaryotic coiled-coil containing proteins. The function is not known. The alternative name is sarcoma antigen NY-SAR-79.
Pssm-ID: 464893 [Multi-domain] Cd Length: 1048 Bit Score: 39.93 E-value: 7.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 259 KDQEIEILMDTLKTKEEESFKIIEELTERCELLQ------QEKEKELSESRRKFLIMNAEIGDLKKKIVLEEQAHQKLLQ 332
Cdd:pfam15818 90 KEKEIEGLKETLKALQVSKYSLQKKVSEMEQKLQlhllakEDHHKQLNEIEKYYATITGQFGLVKENHGKLEQNVQEAIQ 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 333 kHEEMVSQLQQEKESSASMHQELLQ------LKDEVTSERHLLQEELNDTMNE---------------LNK------LHA 385
Cdd:pfam15818 170 -LNKRLSALNKKQESEICSLKKELKkvtsdlIKSKVTCQYKMGEENINLTIKEqkfqelqerlnmeleLNKkineeiTHI 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 386 KEKKAEKLV--KRLEQEIKSQALELGQMEVKLKG---KNAELEQINEMRSNAV-------LQIQEEHSNTLRKLGETVAE 453
Cdd:pfam15818 249 QEEKQDIIIsfQHMQQLLQQQTQANTEMEAELKAlkeNNQTLERDNELQREKVkeneekfLNLQNEHEKALGTWKKHVEE 328
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 454 FESYKKTVAEEISSLKLENTSLQEEVADL----KKIGQVNLQLLQEAENTKNKAKEECARMLLeVQTKLALKEAEAESTK 529
Cdd:pfam15818 329 LNGEINEIKNELSSLKETHIKLQEHYNKLcnqkKFEEDKKFQNVPEVNNENSEMSTEKSENLI-IQKYNSEQEIREENTK 407
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 704469152 530 ESCL------AHMAKLQEKLEERTEDLKRkleMERSRKHEDVTTSLKEE 572
Cdd:pfam15818 408 SFCSdteyreTEKKKGPPVEEIIIEDLQV---LEKSFKNEIDTSVPQDK 453
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
82-506 |
7.58e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 39.75 E-value: 7.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 82 LEKEIRALVREYGEQS----KKLEALEEAFAKMEAK---FKSSVREKTSLLANVACLKKQILEVTRINELLKSKLSEDGV 154
Cdd:COG4717 51 LEKEADELFKPQGRKPelnlKELKELEEELKEAEEKeeeYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPL 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 155 EKKMSSLCQELMKLRNKRDgKEKAALAKQEDMEMKLPEVQRNLEHSKGEVAQLEEKLSATEREKVEEKSDT-----EKLL 229
Cdd:COG4717 131 YQELEALEAELAELPERLE-ELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEEleelqQRLA 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 230 EYITELSGVAETVEKYKLDVAQMEETLMKKDQE------------------IEILMDTLKTKEEESFKII---------- 281
Cdd:COG4717 210 ELEEELEEAQEELEELEEELEQLENELEAAALEerlkearlllliaaallaLLGLGGSLLSLILTIAGVLflvlgllall 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 282 EELTERCELLQQEKEKELSESRRKFLIMNAEIGDLKKKIVLEEQAHQKLLQKHEEMVSQLQQEKESSASMHQElLQLKDE 361
Cdd:COG4717 290 FLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEE-LQLEEL 368
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 362 VTSERHLLQEELNDTMNELNKLHAKEKKAEKLVKRLEQeiKSQALELGQMEVKLKGKNAELEQINEMRSN---AVLQIQE 438
Cdd:COG4717 369 EQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEE--LEEQLEELLGELEELLEALDEEELEEELEEleeELEELEE 446
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 704469152 439 EHSNTLRKLGETVAEFESYKKtvAEEISSLKLENTSLQEEVADLKKIGQVNLQLLQEAENTKNKAKEE 506
Cdd:COG4717 447 ELEELREELAELEAELEQLEE--DGELAELLQELEELKAELRELAEEWAALKLALELLEEAREEYREE 512
|
|
| HEC1 |
COG5185 |
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell ... |
145-493 |
7.71e-03 |
|
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 444066 [Multi-domain] Cd Length: 594 Bit Score: 39.56 E-value: 7.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 145 LKSKLSEDGVEKKMSSLCQELMKLRNKRDGKEKAALAKQEDMEMKLPEVQRNLEHSKGEVAQLEEKLSATeREKVEEKSD 224
Cdd:COG5185 225 AKEIINIEEALKGFQDPESELEDLAQTSDKLEKLVEQNTDLRLEKLGENAESSKRLNENANNLIKQFENT-KEKIAEYTK 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 225 TEKLLEYITELSGVAETVEKYKLDVAQMEETLMKKDQEIEILMDTLKTKEEESFKIIEELTERCELLQQEK--------E 296
Cdd:COG5185 304 SIDIKKATESLEEQLAAAEAEQELEESKRETETGIQNLTAEIEQGQESLTENLEAIKEEIENIVGEVELSKsseeldsfK 383
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 297 KELSESRRKFLIMNAEIGDLKKKIVLEEQAHQKLL-QKHEEMVSQLQQEKESSASMHQELLQLKDEVTSERHLLQEELND 375
Cdd:COG5185 384 DTIESTKESLDEIPQNQRGYAQEILATLEDTLKAAdRQIEELQRQIEQATSSNEEVSKLLNELISELNKVMREADEESQS 463
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704469152 376 TMNELNKLHAKEKKAEKlvKRLEQEIKSQALELGQMEVKLKGKNAELEQINEMRSNAVLQIQEEHSNTLRKLGETVAEFE 455
Cdd:COG5185 464 RLEEAYDEINRSVRSKK--EDLNEELTQIESRVSTLKATLEKLRAKLERQLEGVRSKLDQVAESLKDFMRARGYAHILAL 541
|
330 340 350
....*....|....*....|....*....|....*...
gi 704469152 456 SYKKTVAEEISSLKLENTSLQEEVADLKKIGQVNLQLL 493
Cdd:COG5185 542 ENLIPASELIQASNAKTDGQAANLRTAVIDELTQYLST 579
|
|
| |
