NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|704519354|ref|XP_010082727|]
View 

PREDICTED: Golgi phosphoprotein 3, partial [Pterocles gutturalis]

Protein Classification

GPP34 family phosphoprotein( domain architecture ID 10529731)

golgi phosphoprotein 3 (GPP34) family protein similar to eukaryotic GPP34, whose functions include a role in golgi membrane trafficking, anterograde transport from the golgi to the plasma membrane, cell migration, and regulation of mitochondrial lipids biosynthesis

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
GPP34 pfam05719
Golgi phosphoprotein 3 (GPP34); This family consists of several eukaryotic GPP34 like proteins. ...
 1-198 9.12e-47

Golgi phosphoprotein 3 (GPP34); This family consists of several eukaryotic GPP34 like proteins. GPP34 localizes to the Golgi complex and is conserved from yeast to humans. The cytosolic-ally exposed location of GPP34 predict a role for a novel coat protein in Golgi trafficking.


:

Pssm-ID: 428605  Cd Length: 198  Bit Score: 153.25  E-value: 9.12e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704519354    1 GYTSFWNDCISSGLRGCMLIELALRGRLQLEACGmrrkslltRKVICKSDAPTGDVLLDEALKHIKETQPPETVQNWIEL 80
Cdd:pfam05719  15 GRPSLGARALSYALAGALLLELALAGRVAVDGEG--------GRVVVVDPRPTGDPLLDEALALLKAEKRPRKVKDWLRK 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704519354   81 LSgetwnplklhyqlRNVRERLAKNLVEKGVLTTEKQNFL-LFDMTTHPLTNNNIKQRLIKKVQEAVLDKWVNDPhrmdk 159
Cdd:pfam05719  87 LS-------------RGLRERVLARLVAKGVLRRERRRVLgLFPRTRYPVVDPAAEAALRARLRAALLGGEPPDP----- 148

                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 704519354  160 RLLALVYLAHASDVLENAFApllDEQYDLATKRVRQLLD 198
Cdd:pfam05719 149 RTAALAALLAAAGLLRKVLP---DLERRRARARAKELLE 184
 
Name Accession Description Interval E-value
GPP34 pfam05719
Golgi phosphoprotein 3 (GPP34); This family consists of several eukaryotic GPP34 like proteins. ...
 1-198 9.12e-47

Golgi phosphoprotein 3 (GPP34); This family consists of several eukaryotic GPP34 like proteins. GPP34 localizes to the Golgi complex and is conserved from yeast to humans. The cytosolic-ally exposed location of GPP34 predict a role for a novel coat protein in Golgi trafficking.


Pssm-ID: 428605  Cd Length: 198  Bit Score: 153.25  E-value: 9.12e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704519354    1 GYTSFWNDCISSGLRGCMLIELALRGRLQLEACGmrrkslltRKVICKSDAPTGDVLLDEALKHIKETQPPETVQNWIEL 80
Cdd:pfam05719  15 GRPSLGARALSYALAGALLLELALAGRVAVDGEG--------GRVVVVDPRPTGDPLLDEALALLKAEKRPRKVKDWLRK 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704519354   81 LSgetwnplklhyqlRNVRERLAKNLVEKGVLTTEKQNFL-LFDMTTHPLTNNNIKQRLIKKVQEAVLDKWVNDPhrmdk 159
Cdd:pfam05719  87 LS-------------RGLRERVLARLVAKGVLRRERRRVLgLFPRTRYPVVDPAAEAALRARLRAALLGGEPPDP----- 148

                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 704519354  160 RLLALVYLAHASDVLENAFApllDEQYDLATKRVRQLLD 198
Cdd:pfam05719 149 RTAALAALLAAAGLLRKVLP---DLERRRARARAKELLE 184
 
Name Accession Description Interval E-value
GPP34 pfam05719
Golgi phosphoprotein 3 (GPP34); This family consists of several eukaryotic GPP34 like proteins. ...
 1-198 9.12e-47

Golgi phosphoprotein 3 (GPP34); This family consists of several eukaryotic GPP34 like proteins. GPP34 localizes to the Golgi complex and is conserved from yeast to humans. The cytosolic-ally exposed location of GPP34 predict a role for a novel coat protein in Golgi trafficking.


Pssm-ID: 428605  Cd Length: 198  Bit Score: 153.25  E-value: 9.12e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704519354    1 GYTSFWNDCISSGLRGCMLIELALRGRLQLEACGmrrkslltRKVICKSDAPTGDVLLDEALKHIKETQPPETVQNWIEL 80
Cdd:pfam05719  15 GRPSLGARALSYALAGALLLELALAGRVAVDGEG--------GRVVVVDPRPTGDPLLDEALALLKAEKRPRKVKDWLRK 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 704519354   81 LSgetwnplklhyqlRNVRERLAKNLVEKGVLTTEKQNFL-LFDMTTHPLTNNNIKQRLIKKVQEAVLDKWVNDPhrmdk 159
Cdd:pfam05719  87 LS-------------RGLRERVLARLVAKGVLRRERRRVLgLFPRTRYPVVDPAAEAALRARLRAALLGGEPPDP----- 148

                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 704519354  160 RLLALVYLAHASDVLENAFApllDEQYDLATKRVRQLLD 198
Cdd:pfam05719 149 RTAALAALLAAAGLLRKVLP---DLERRRARARAKELLE 184
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH