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Conserved domains on  [gi|672039459|ref|XP_008758385|]
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mas-related G-protein coupled receptor member E isoform X1 [Rattus norvegicus]

Protein Classification

G protein-coupled receptor family protein( domain architecture ID 705710)

G protein-coupled receptor family protein is a seven-transmembrane G protein-coupled receptor (7TM-GPCR) family protein which typically transmits an extracellular signal into the cell by the conformational rearrangement of the 7TM helices and by the subsequent binding and activation of an intracellular heterotrimeric G protein; GPCR ligands include light-sensitive compounds, odors, pheromones, hormones, and neurotransmitters

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
7tm_GPCRs super family cl28897
seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary ...
42-291 7.11e-133

seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary model represents the seven-transmembrane (7TM) receptors, often referred to as G protein-coupled receptors (GPCRs), which transmit physiological signals from the outside of the cell to the inside via G proteins. GPCRs constitute the largest known superfamily of transmembrane receptors across the three kingdoms of life that respond to a wide variety of extracellular stimuli including peptides, lipids, neurotransmitters, amino acids, hormones, and sensory stimuli such as light, smell and taste. All GPCRs share a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. However, some 7TM receptors, such as the type 1 microbial rhodopsins, do not activate G proteins. Based on sequence similarity, GPCRs can be divided into six major classes: class A (the rhodopsin-like family), class B (the Methuselah-like, adhesion and secretin-like receptor family), class C (the metabotropic glutamate receptor family), class D (the fungal mating pheromone receptors), class E (the cAMP receptor family), and class F (the frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


The actual alignment was detected with superfamily member cd15112:

Pssm-ID: 475119  Cd Length: 272  Bit Score: 378.02  E-value: 7.11e-133
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672039459  42 WLLNQNVYRNPFSIYLLDVACADLIFLCCHMVAIIPELLQDQLNFPEFVHISLIMLRFFCYIVGLSLLVAISTEQCLATL 121
Cdd:cd15112   23 WLLSSNVYRNPFSIYLLDVACADLIFLCCHMVAIIPELLQNHLSFPHFVYDSLLALRFFCYIVGLSLLAAISAEQCLATL 102
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672039459 122 FPSGYLCRRPRYLTTCVCAFIWVLCLLLDLLLSGACTQFFGAPSYHLCGMLWLVVAVLLAALCCTMCVTSLLLLLRVERG 201
Cdd:cd15112  103 FPAWYQCRRPRHLTTCVCALLWALCLLLHLLLSGACTQFFGGPSGHLCGRLWLVRAVLLALLCCTMCVSSLVLLLRVERG 182
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672039459 202 PERHQPRGFPTLVLLVILLFLFCGLPFGIFWLSKNLSWHTPLYFYHFSFFMASVHSAAKPAIYFFLGSTPGQRFQEPLRL 281
Cdd:cd15112  183 PPRQRPRGFPALVLLTVLLFLFCGLPFGIYWLSLNLLWRIPHYFYHFSFLMAAVHSAAKPPIYFCLGSLRGGRFREPLRL 262
                        250
                 ....*....|
gi 672039459 282 VLQRALGDEA 291
Cdd:cd15112  263 VLQRALGDEA 272
 
Name Accession Description Interval E-value
7tmA_MrgprE cd15112
mas-related G protein-coupled receptor subtype E, member of the class A family of ...
42-291 7.11e-133

mas-related G protein-coupled receptor subtype E, member of the class A family of seven-transmembrane G protein-coupled receptors; The Mas-related G-protein coupled receptor (Mrgpr) family constitutes a group of orphan receptors exclusively expressed in nociceptive primary sensory neurons and mast cells in the skin. Members of the Mrgpr family have been implicated in the modulation of nociception, pruritus (itching), and mast cell degranulation. The Mrgpr family in rodents and humans contains more than 50 members that can be grouped into 9 distinct subfamilies: MrgprA, B, C (MrgprX1), D, E, F, G, H (GPR90), and the primate-specific MrgprX subfamily. Some Mrgprs can be activated by endogenous ligands such as beta-alanine, adenine (a cell metabolite and potential transmitter), RF-amide related peptides, or salusin-beta (a bioactive peptide). However, the effects of these agonists are not clearly understood, and the physiological role of the individual receptor family members remains to be determined.


Pssm-ID: 320240  Cd Length: 272  Bit Score: 378.02  E-value: 7.11e-133
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672039459  42 WLLNQNVYRNPFSIYLLDVACADLIFLCCHMVAIIPELLQDQLNFPEFVHISLIMLRFFCYIVGLSLLVAISTEQCLATL 121
Cdd:cd15112   23 WLLSSNVYRNPFSIYLLDVACADLIFLCCHMVAIIPELLQNHLSFPHFVYDSLLALRFFCYIVGLSLLAAISAEQCLATL 102
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672039459 122 FPSGYLCRRPRYLTTCVCAFIWVLCLLLDLLLSGACTQFFGAPSYHLCGMLWLVVAVLLAALCCTMCVTSLLLLLRVERG 201
Cdd:cd15112  103 FPAWYQCRRPRHLTTCVCALLWALCLLLHLLLSGACTQFFGGPSGHLCGRLWLVRAVLLALLCCTMCVSSLVLLLRVERG 182
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672039459 202 PERHQPRGFPTLVLLVILLFLFCGLPFGIFWLSKNLSWHTPLYFYHFSFFMASVHSAAKPAIYFFLGSTPGQRFQEPLRL 281
Cdd:cd15112  183 PPRQRPRGFPALVLLTVLLFLFCGLPFGIYWLSLNLLWRIPHYFYHFSFLMAAVHSAAKPPIYFCLGSLRGGRFREPLRL 262
                        250
                 ....*....|
gi 672039459 282 VLQRALGDEA 291
Cdd:cd15112  263 VLQRALGDEA 272
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
50-144 1.54e-03

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 39.59  E-value: 1.54e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672039459   50 RNPFSIYLLDVACADLIFLCCHM-VAIIPELLQDQLNFPEFVHISLIMLRFFCYIVGLSLLVAISTEQCLATLFPSGYLC 128
Cdd:pfam00001  16 RTPTNIFLLNLAVADLLFSLLTLpFWLVYYLNHGDWPFGSALCKIVGALFVVNGYASILLLTAISIDRYLAIVHPLRYKR 95
                          90
                  ....*....|....*.
gi 672039459  129 RRPRYLTTCVCAFIWV 144
Cdd:pfam00001  96 RRTPRRAKVLILVIWV 111
 
Name Accession Description Interval E-value
7tmA_MrgprE cd15112
mas-related G protein-coupled receptor subtype E, member of the class A family of ...
42-291 7.11e-133

mas-related G protein-coupled receptor subtype E, member of the class A family of seven-transmembrane G protein-coupled receptors; The Mas-related G-protein coupled receptor (Mrgpr) family constitutes a group of orphan receptors exclusively expressed in nociceptive primary sensory neurons and mast cells in the skin. Members of the Mrgpr family have been implicated in the modulation of nociception, pruritus (itching), and mast cell degranulation. The Mrgpr family in rodents and humans contains more than 50 members that can be grouped into 9 distinct subfamilies: MrgprA, B, C (MrgprX1), D, E, F, G, H (GPR90), and the primate-specific MrgprX subfamily. Some Mrgprs can be activated by endogenous ligands such as beta-alanine, adenine (a cell metabolite and potential transmitter), RF-amide related peptides, or salusin-beta (a bioactive peptide). However, the effects of these agonists are not clearly understood, and the physiological role of the individual receptor family members remains to be determined.


Pssm-ID: 320240  Cd Length: 272  Bit Score: 378.02  E-value: 7.11e-133
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672039459  42 WLLNQNVYRNPFSIYLLDVACADLIFLCCHMVAIIPELLQDQLNFPEFVHISLIMLRFFCYIVGLSLLVAISTEQCLATL 121
Cdd:cd15112   23 WLLSSNVYRNPFSIYLLDVACADLIFLCCHMVAIIPELLQNHLSFPHFVYDSLLALRFFCYIVGLSLLAAISAEQCLATL 102
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672039459 122 FPSGYLCRRPRYLTTCVCAFIWVLCLLLDLLLSGACTQFFGAPSYHLCGMLWLVVAVLLAALCCTMCVTSLLLLLRVERG 201
Cdd:cd15112  103 FPAWYQCRRPRHLTTCVCALLWALCLLLHLLLSGACTQFFGGPSGHLCGRLWLVRAVLLALLCCTMCVSSLVLLLRVERG 182
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672039459 202 PERHQPRGFPTLVLLVILLFLFCGLPFGIFWLSKNLSWHTPLYFYHFSFFMASVHSAAKPAIYFFLGSTPGQRFQEPLRL 281
Cdd:cd15112  183 PPRQRPRGFPALVLLTVLLFLFCGLPFGIYWLSLNLLWRIPHYFYHFSFLMAAVHSAAKPPIYFCLGSLRGGRFREPLRL 262
                        250
                 ....*....|
gi 672039459 282 VLQRALGDEA 291
Cdd:cd15112  263 VLQRALGDEA 272
7tmA_Mrgpr cd14973
mas-related G protein-coupled receptors, member of the class A family of seven-transmembrane G ...
42-291 4.12e-72

mas-related G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The Mas-related G-protein coupled receptor (Mrgpr) family constitutes a group of orphan receptors exclusively expressed in nociceptive primary sensory neurons and mast cells in the skin. Members of the Mrgpr family have been implicated in the modulation of nociception, pruritus (itching), and mast cell degranulation. The Mrgpr family in rodents and humans contains more than 50 members that can be grouped into 9 distinct subfamilies: MrgprA, B, C (MrgprX1), D, E, F, G, H (GPR90), and the primate-specific MrgprX subfamily. Some Mrgprs can be activated by endogenous ligands such as beta-alanine, adenine (a cell metabolite and potential transmitter), RF-amide related peptides, or salusin-beta (a bioactive peptide). However, the effects of these agonists are not clearly understood, and the physiological role of the individual receptor family members remains to be determined. Also included in this family is Mas-related G-protein coupled receptor 1-like (MAS1L) which is only found in primates. The angiotensin-II metabolite angiotensin is an endogenous ligand for MAS1L.


Pssm-ID: 320104 [Multi-domain]  Cd Length: 272  Bit Score: 223.67  E-value: 4.12e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672039459  42 WLLNQNVYRNPFSIYLLDVACADLIFLCCHMVAIIPELLQDqLNFPEFVHISLIMLRFFCYIVGLSLLVAISTEQCLATL 121
Cdd:cd14973   23 WLLGFRIKRNPFSVYILNLAAADFLFLSCQAIQSLEDLLGG-SLPGFALCRLLATLMFFSYTVGLSLLAAISTERCLSVL 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672039459 122 FPSGYLCRRPRYLTTCVCAFIWVLCLLLDLLLSGACTQFFGAPSYHLCGMLWLVVAVLLAALCCTMCVTSLLLLLRVERG 201
Cdd:cd14973  102 FPIWYRCHRPKHLSAVVCALLWALSLLLSVLESYFCGFLFWKFNESACRTFNFLSALLFLLLFLVMCVSSLTLLIRVQCS 181
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672039459 202 PERHQPRGFPTLVLLVILLFLFCGLPFGIFWLSKNLSWHTPL-YFYHFSFFMASVHSAAKPAIYFFLGSTPGQRFQEPLR 280
Cdd:cd14973  182 SQRRPPTRLYVVILLTVLVFLLCGLPLGIYWFLLLWFSNYLFhTFHPISDLLSCVNSSANPIIYFFVGSLRGRRLREPLR 261
                        250
                 ....*....|.
gi 672039459 281 LVLQRALGDEA 291
Cdd:cd14973  262 VVLQRALRDEP 272
7tmA_MrgprD cd15108
mas-related G protein-coupled receptor subtype D, member of the class A family of ...
42-290 4.82e-37

mas-related G protein-coupled receptor subtype D, member of the class A family of seven-transmembrane G protein-coupled receptors; The Mas-related G-protein coupled receptor (Mrgpr) family constitutes a group of orphan receptors exclusively expressed in nociceptive primary sensory neurons and mast cells in the skin. Members of the Mrgpr family have been implicated in the modulation of nociception, pruritus (itching), and mast cell degranulation. The Mrgpr family in rodents and humans contains more than 50 members that can be grouped into 9 distinct subfamilies: MrgprA, B, C (MrgprX1), D, E, F, G, H (GPR90), and the primate-specific MrgprX subfamily. Some Mrgprs can be activated by endogenous ligands such as beta-alanine, adenine (a cell metabolite and potential transmitter), RF-amide related peptides, or salusin-beta (a bioactive peptide). However, the effects of these agonists are not clearly understood, and the physiological role of the individual receptor family members remains to be determined.


Pssm-ID: 320236  Cd Length: 276  Bit Score: 133.34  E-value: 4.82e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672039459  42 WLLNQNVYRNPFSIYLLDVACADLIFLCChMVAIIPELLQDQLNFPEFVHISLIMLRFFCYIVGLSLLVAISTEQCLATL 121
Cdd:cd15108   23 WLLSCRGRRTPFCVYVLHLAVADLLFLLC-MASTLSLETSPLVITHDLAYEVVRRVKYFAYTASLSLLTAISTQRCLSVL 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672039459 122 FPSGYLCRRPRYLTTCVCAFIWVLCLLLDLLLSGACTQFFgAPSYHLCGML-WLVVAVLLAALCCTMCVTSLLLLLRVER 200
Cdd:cd15108  102 FPIWYKCHQPRHLSAVVCALLWALSLLMNVLASFFCSEFW-HPDEWQCFKVdMVFSFLIMGIFTPVMALSSLILFVRVRR 180
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672039459 201 --GPERHQPRGFPTLVLLVILLFLFCGLPFGIFWLSknLSW-----HTPLYFYHFSFFMASVHSAAKPAIYFFLGSTPGQ 273
Cdd:cd15108  181 ssRQWRRRPTRLYVVVLASVLVFLACALPLGIYWFL--LYWldlpqEVKTLFSCLSRLSSSVSSSANPVIYFLVGSRGSR 258
                        250
                 ....*....|....*..
gi 672039459 274 RFQEPLRLVLQRALGDE 290
Cdd:cd15108  259 RLREPLGAVLQRALREE 275
7tmA_MrgprX-like cd15106
primate-specific mas-related G protein-coupled receptor subtype X-like, member of the class A ...
42-289 4.94e-36

primate-specific mas-related G protein-coupled receptor subtype X-like, member of the class A family of seven-transmembrane G protein-coupled receptors; The Mas-related G-protein coupled receptor (Mrgpr) family constitutes a group of orphan receptors exclusively expressed in nociceptive primary sensory neurons and mast cells in the skin. Members of the Mrgpr family have been implicated in the modulation of nociception, pruritus (itching), and mast cell degranulation. The Mrgpr family in rodents and humans contains more than 50 members that can be grouped into 9 distinct subfamilies: MrgprA, B, C (MrgprX1), D, E, F, G, H (GPR90), and the primate-specific MrgprX subfamily. Some Mrgprs can be activated by endogenous ligands such as beta-alanine, adenine (a cell metabolite and potential transmitter), RF-amide related peptides, or salusin-beta (a bioactive peptide). However, the effects of these agonists are not clearly understood, and the physiological role of the individual receptor family members remains to be determined.


Pssm-ID: 320234  Cd Length: 274  Bit Score: 130.64  E-value: 4.94e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672039459  42 WLLNQNVYRNPFSIYLLDVACADLIFLCCHMVaiipELLQDQLNFPEFVHISLIM--LRFFCYIVGLSLLVAISTEQCLA 119
Cdd:cd15106   23 WLLGFRMRRNAFSVYILNLAAADFLFLCCHII----DSLLRLINIFHIISIPKILtnVMTFPYFAGLSMLSAISTERCLS 98
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672039459 120 TLFPSGYLCRRPRYLTTCVCAFIWVLCLLLDLLLSGACTQFFGAPSYHLCGMLWLVVAVLLAALCCTMCVTSLLLLLRVE 199
Cdd:cd15106   99 VLWPIWYRCHRPRHLSAVVCVLLWALSLLLSILEWKFCGFLFSGADSHWCQTFDFITTAWLIFLFVVLCGSSLALLVRIL 178
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672039459 200 RGPERHQPRGFPTLVLLVILLFLFCGLPFGIFW---LSKNLSWHTPL-YFYHFSFFMASVHSAAKPAIYFFLGSTPGQRF 275
Cdd:cd15106  179 CGSRKMPLTRLYVTILLTVLVFLLCGLPFGIQWfllLWIHIDLEVLFcHVYLVSVVLSCLNSSANPIIYFFVGSFRQRQN 258
                        250
                 ....*....|....
gi 672039459 276 QEPLRLVLQRALGD 289
Cdd:cd15106  259 RQNLKLVLQRALQD 272
7tmA_MrgprB cd15107
mas-related G protein-coupled receptor subtype B, member of the class A family of ...
42-289 6.20e-36

mas-related G protein-coupled receptor subtype B, member of the class A family of seven-transmembrane G protein-coupled receptors; The Mas-related G-protein coupled receptor (Mrgpr) family constitutes a group of orphan receptors exclusively expressed in nociceptive primary sensory neurons and mast cells in the skin. Members of the Mrgpr family have been implicated in the modulation of nociception, pruritus (itching), and mast cell degranulation. The Mrgpr family in rodents and humans contains more than 50 members that can be grouped into 9 distinct subfamilies: MrgprA, B, C (MrgprX1), D, E, F, G, H (GPR90), and the primate-specific MrgprX subfamily. Some Mrgprs can be activated by endogenous ligands such as beta-alanine, adenine (a cell metabolite and potential transmitter), RF-amide related peptides, or salusin-beta (a bioactive peptide). However, the effects of these agonists are not clearly understood, and the physiological role of the individual receptor family members remains to be determined.


Pssm-ID: 320235  Cd Length: 276  Bit Score: 130.21  E-value: 6.20e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672039459  42 WLLNQNVYRNPFSIYLLDVACADLIFLCCHMVAIIPELLQDQlNFPEFVHISLIMLRFFCYIVGLSLLVAISTEQCLATL 121
Cdd:cd15107   23 WLLGFHMHRNAFSVYILNLAGADFLFLCTQIVFSLEIVLQFH-SIDIHIPLFLLTVTMFAYLAGLSMITAISIERCLSVM 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672039459 122 FPSGYLCRRPRYLTTCVCAFIWVLCLLLDLLLSGACTQFFGAPSYHLCGMLWLVVAVLLAALCCTMCVTSLLLLLRVERG 201
Cdd:cd15107  102 WPIWYHCQRPRHTSAVICTLLWVLSLLLSLLEGKGCGFLFSTYDYYWCWTLDLITTAWLIVLFVVLSGSSLALLVRIFCG 181
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672039459 202 PERHQPRGFPTLVLLVILLFLFCGLPFGIFWL----SKNLSWHTPLYFYHFSFFMASVHSAAKPAIYFFLGSTPGQRFQ- 276
Cdd:cd15107  182 SHRIPVTRLYVTIALTVLVFLIFGLPFGIYWFllkwIEEFYIVPCCGFYEVILFLSCVNSCANPIIYFLVGSIRHHRFQr 261
                        250
                 ....*....|...
gi 672039459 277 EPLRLVLQRALGD 289
Cdd:cd15107  262 KTLKLLLQRAMQD 274
7tmA_MrgprH cd15110
mas-related G protein-coupled receptor subtype H, member of the class A family of ...
42-291 1.08e-31

mas-related G protein-coupled receptor subtype H, member of the class A family of seven-transmembrane G protein-coupled receptors; The Mas-related G-protein coupled receptor (Mrgpr) family constitutes a group of orphan receptors exclusively expressed in nociceptive primary sensory neurons and mast cells in the skin. Members of the Mrgpr family have been implicated in the modulation of nociception, pruritus (itching), and mast cell degranulation. The Mrgpr family in rodents and humans contains more than 50 members that can be grouped into 9 distinct subfamilies: MrgprA, B, C (MrgprX1), D, E, F, G, H (GPR90), and the primate-specific MrgprX subfamily. Some Mrgprs can be activated by endogenous ligands such as beta-alanine, adenine (a cell metabolite and potential transmitter), RF-amide related peptides, or salusin-beta (a bioactive peptide). However, the effects of these agonists are not clearly understood, and the physiological role of the individual receptor family members remains to be determined.


Pssm-ID: 320238  Cd Length: 274  Bit Score: 119.04  E-value: 1.08e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672039459  42 WLLNQNVYRNPFSIYLLDVACADLIFLCCHMVAIIPELLQdqLNFPEFVH----ISLIMLRFFCYIVGLSLLVAISTEQC 117
Cdd:cd15110   23 WFLGFRIRRNPFTVYILHLAIADFTFLLCIFILSIMYIGP--FNFSHSRDyvamLIFIILFLFGYNTGLYLLTAISVERC 100
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672039459 118 LATLFPSGYLCRRPRYLTTCVCAFIWVLCLLLDLLLSGACTQFFGAPSYHLCGMLWLVVAVLLAALCCTMCVTSLLLLLR 197
Cdd:cd15110  101 LSVLYPIWYRCHRPKHQSAIVCGLLWALSVLMTSLEYLMCIDEGFHVRNECRAVLIFIGILTFLVFTPLMLISSLILFIK 180
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672039459 198 VERGPERHQPRGFPTLVLLVILLFLFCGLPFGIFWLSKNLSWHTPLYFYHFSFFMASVHSAAKPAIYFFLGSTPGQRFQE 277
Cdd:cd15110  181 VRCNSQRRHPGKLYIIIMLTVIFFLIFAMPMRVLLLLNYLHHSSFLFSNPVPFLLSTVNSSINPIVYFLVGSLRRKRIKK 260
                        250
                 ....*....|....
gi 672039459 278 PLRLVLQRALGDEA 291
Cdd:cd15110  261 SLKVALQRVFEDKA 274
7tmA_MrgprG cd15111
mas-related G protein-coupled receptor subtype G, member of the class A family of ...
38-291 3.15e-31

mas-related G protein-coupled receptor subtype G, member of the class A family of seven-transmembrane G protein-coupled receptors; The Mas-related G-protein coupled receptor (Mrgpr) family constitutes a group of orphan receptors exclusively expressed in nociceptive primary sensory neurons and mast cells in the skin. Members of the Mrgpr family have been implicated in the modulation of nociception, pruritus (itching), and mast cell degranulation. The Mrgpr family in rodents and humans contains more than 50 members that can be grouped into 9 distinct subfamilies: MrgprA, B, C (MrgprX1), D, E, F, G, H (GPR90), and the primate-specific MrgprX subfamily. Some Mrgprs can be activated by endogenous ligands such as beta-alanine, adenine (a cell metabolite and potential transmitter), RF-amide related peptides, or salusin-beta (a bioactive peptide). However, the effects of these agonists are not clearly understood, and the physiological role of the individual receptor family members remains to be determined.


Pssm-ID: 320239  Cd Length: 263  Bit Score: 117.58  E-value: 3.15e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672039459  38 GVALWLLNQNVYRNPFSIYLLDVACADLIFLCCHMVAIIPELL---QDQLNFPefvhislimLRFFCYIVGLSLLVAIST 114
Cdd:cd15111   19 GLVLWHLGFHIKKGPFSNYLLHLAAADFLFLSCQVGFSIAQAAlgsEDTLYFV---------VTFLWFAAGLWLLAAFSV 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672039459 115 EQCLATLFPSGYLCRRPRYLTTCVCAFIWVLCLLLDLLLSGAC------TQFFGAPSYHLCGMLWLVVAVllaalcCTMC 188
Cdd:cd15111   90 ERCLSYLFPACCQGCRPRWTSAVLCAVVWVLTLPAVLLPANACgllrngSRLLVCLRYHAASVTWLLVLA------CVAC 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672039459 189 VTSLLLLLRVERGPERHQPRgFPTLVLLVILLFLFCGLPFGIFW-LSKNLSWHTPLyFYHFSFFMASVHSAAKPAIYFFL 267
Cdd:cd15111  164 GAGLVLFIWVCCCSQRPRPK-FYGIVLGSGLLLLFCGLPFVLYWsLRPLLNFLLPM-FPPLATLLACIDSSSKPLIYYLM 241
                        250       260
                 ....*....|....*....|....
gi 672039459 268 GSTPGQRfqEPLRLVLQRALGDEA 291
Cdd:cd15111  242 GRQPGKR--EPLRVVLQRALGEGA 263
7tmA_MrgprA cd15105
mas-related G protein-coupled receptor subtype A, member of the class A family of ...
42-289 3.63e-30

mas-related G protein-coupled receptor subtype A, member of the class A family of seven-transmembrane G protein-coupled receptors; The Mas-related G-protein coupled receptor (Mrgpr) family constitutes a group of orphan receptors exclusively expressed in nociceptive primary sensory neurons and mast cells in the skin. Members of the Mrgpr family have been implicated in the modulation of nociception, pruritus (itching), and mast cell degranulation. The Mrgpr family in rodents and humans contains more than 50 members that can be grouped into 9 distinct subfamilies: MrgprA, B, C (MrgprX1), D, E, F, G, H (GPR90), and the primate-specific MrgprX subfamily. Some Mrgprs can be activated by endogenous ligands such as beta-alanine, adenine (a cell metabolite and potential transmitter), RF-amide related peptides, or salusin-beta (a bioactive peptide). However, the effects of these agonists are not clearly understood, and the physiological role of the individual receptor family members remains to be determined.


Pssm-ID: 320233  Cd Length: 276  Bit Score: 115.23  E-value: 3.63e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672039459  42 WLLNQNVYRNPFSIYLLDVACADLIFLCCHMVAIIPELLQDQLNFPEFVHiSLIMLRFFCYIVGLSLLVAISTEQCLATL 121
Cdd:cd15105   23 WLLGFRLHRNAFSVYILNLALADFLFLLCHIIDSTLLLLKVFYPNIIFLP-CFYTIMMVLYITGLSMLSAISTERCLSVL 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672039459 122 FPSGYLCRRPRYLTTCVCAFIWVLCLLLDLLLSGACTqFFGAP--SYHLCGMLWLVVAVLLAALCCTMCVTSLLLLLRVE 199
Cdd:cd15105  102 CPIWYRCRRPEHTSTVMCAVIWVLSLLICILNRYFCG-FLDTKyeNDSVCLASNFFTAAYLMFLFVVLCLSSLALLARLF 180
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672039459 200 RGPERHQPRGFPTLVLLVILLFLFCGLPFGIFWLSknLSW-HTPLYFYHFSFFMAS-----VHSAAKPAIYFFLGSTPGQ 273
Cdd:cd15105  181 CGAGQMKLTRLYVTIMLTVLVFLLCGLPFGIYWFL--LFWiKDDFHVLDYGLYLASvvltaVNSCANPIIYFFVGSFRHR 258
                        250
                 ....*....|....*.
gi 672039459 274 RFQEPLRLVLQRALGD 289
Cdd:cd15105  259 LKHQTLKMVLQSALQD 274
7tmA_MrgprF cd15109
mas-related G protein-coupled receptor subtype F, member of the class A family of ...
42-291 1.18e-24

mas-related G protein-coupled receptor subtype F, member of the class A family of seven-transmembrane G protein-coupled receptors; The Mas-related G-protein coupled receptor (Mrgpr) family constitutes a group of orphan receptors exclusively expressed in nociceptive primary sensory neurons and mast cells in the skin. Members of the Mrgpr family have been implicated in the modulation of nociception, pruritus (itching), and mast cell degranulation. The Mrgpr family in rodents and humans contains more than 50 members that can be grouped into 9 distinct subfamilies: MrgprA, B, C (MrgprX1), D, E, F, G, H (GPR90), and the primate-specific MrgprX subfamily. Some Mrgprs can be activated by endogenous ligands such as beta-alanine, adenine (a cell metabolite and potential transmitter), RF-amide related peptides, or salusin-beta (a bioactive peptide). However, the effects of these agonists are not clearly understood, and the physiological role of the individual receptor family members remains to be determined.


Pssm-ID: 320237  Cd Length: 274  Bit Score: 100.37  E-value: 1.18e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672039459  42 WLLNQNVYRNPFSIYLLDVACADLIFLCCHMVAIIPELLQDQLNFPEFVHISLIMLRFFCYIVGLSLLVAISTEQCLATL 121
Cdd:cd15109   23 WFFGFSIKRNPFSIYFLHLASADVGYLFSKAVFSILNTGGFLGTFADYIRSVSRILGLCTFLTGVSLLPAISIERCVSVI 102
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672039459 122 FPSGYLCRRPRYLTTCVCAFIWVLCLLLDLLLSGACTqFFG--APSYHLCGMLWLVVAVLLAALCCTMCVTSLLLLLRVE 199
Cdd:cd15109  103 FPTWYWRRRPKRLSAVVCALLWMLSLLVTCIHNYFCV-FLGreAPGAACRHMDIFLGILLFLLFCPLMVLPCLALILHVE 181
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672039459 200 -RGPERHQPRGFPTLVLLVILLFLFCGLPFGIFWLsknLSW--HTPLYFYHF-SFFMASVHSAAKPAIYFFLGSTPGQRF 275
Cdd:cd15109  182 cRARRRQRSAKLNHVILAMVSVFLVSSIYLGIDWF---LFWvfQIPAPFPEYvTDLCICINSSAKPIVYFLAGRDKSQRL 258
                        250
                 ....*....|....*.
gi 672039459 276 QEPLRLVLQRALGDEA 291
Cdd:cd15109  259 WEPLRVVFQRALRDGA 274
7tmA_MAS1L cd15113
mas-related G protein-coupled receptor 1-like (MAS1L), member of the class A family of ...
39-290 2.96e-22

mas-related G protein-coupled receptor 1-like (MAS1L), member of the class A family of seven-transmembrane G protein-coupled receptors; MAS1L is also called MAS1 oncogene-like (MAS1-like) or mas-related G-protein coupled receptor MRG. MAS1L is a G protein-coupled receptor that only found in primates. The angiotensin-II metabolite angiotensin is an endogenous ligand for MAS1L. The Mas-related G-protein coupled receptor (Mrgpr) family constitutes a group of orphan receptors exclusively expressed in nociceptive primary sensory neurons and mast cells in the skin. Members of the Mrgpr family have been implicated in the modulation of nociception, pruritus (itching), and mast cell degranulation. The Mrgpr family in rodents and humans contains more than 50 members that can be grouped into 9 distinct subfamilies: MrgprA, B, C (MrgprX1), D, E, F, G, H (GPR90), and the primate-specific MrgprX subfamily. Some Mrgprs can be activated by endogenous ligands such as beta-alanine, adenine (a cell metabolite and potential transmitter), RF-amide related peptides, or salusin-beta (a bioactive peptide). However, the effects of these agonists are not clearly understood, and the physiological role of the individual receptor family members remains to be determined.


Pssm-ID: 320241  Cd Length: 265  Bit Score: 93.74  E-value: 2.96e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672039459  39 VALWLLNQNVYRNPFSIYLLDVACADLIFLCCHMVAIIPELLQDQLNFPEFVHISLIMLRFFCYIVGLSLLVAISTEQCL 118
Cdd:cd15113   20 VVFWLLCCGVRSNPYMVYILNLAAADVINLSCSAVILLEVTLLLYHGVTLFVADFLEPVSYFSDTVGLCLLVAISTESCL 99
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672039459 119 ATLFPSgYLCRRPRYLTTCVCAFIW--------VLCLLLDLLLSGACTQFF-GAPSYHLcgmlwlvvavllaALCCTMCV 189
Cdd:cd15113  100 CVLFPI-WCCHRPKYTSAVVSTLSWglplslhiVKSLCLYWEHGLACDIFHkGFGIFHA-------------LISLVMCV 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672039459 190 TSLLLLLRVERGPERHQPRGFPTLVLLVILLFLFCGLPFGIFWLSKNLSWHTpLYFYHFSFFmASVHSAAKPAIYFFLGS 269
Cdd:cd15113  166 SSLTLTIRSLCCSQQCSATRIYHVVRISAIMFLLWGLPLVVAPLLPDFEYLT-TTFDLLLLL-SIIVSSANPIIYFLVGS 243
                        250       260
                 ....*....|....*....|.
gi 672039459 270 TPGQRFQEPLRLVLQRALGDE 290
Cdd:cd15113  244 LRRKRLKESLKVILQRALADK 264
7tm_classA_rhodopsin-like cd00637
rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor ...
50-267 1.20e-09

rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor superfamily; Class A rhodopsin-like receptors constitute about 90% of all GPCRs. The class A GPCRs include the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. Based on sequence similarity, GPCRs can be divided into six major classes: class A (rhodopsin-like family), class B (Methuselah-like, adhesion and secretin-like receptor family), class C (metabotropic glutamate receptor family), class D (fungal mating pheromone receptors), class E (cAMP receptor family), and class F (frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


Pssm-ID: 410626 [Multi-domain]  Cd Length: 275  Bit Score: 58.07  E-value: 1.20e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672039459  50 RNPFSIYLLDVACADLIFLCCHMVAIIPELLQDQLNFPEFVHISLIMLRFFCYIVGLSLLVAISTEQCLATLFPSGYLCR 129
Cdd:cd00637   30 RTVTNYFILNLAVADLLVGLLVIPFSLVSLLLGRWWFGDALCKLLGFLQSVSLLASILTLTAISVDRYLAIVHPLRYRRR 109
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672039459 130 RPRYLTTCVCAFIWVLCLLLDLLLSGACTQFFGAPSYHLCGMLWLVVAVLLAALC----------CTMCVTSLLLLLRVE 199
Cdd:cd00637  110 FTRRRAKLLIALIWLLSLLLALPPLLGWGVYDYGGYCCCCLCWPDLTLSKAYTIFlfvllfllplLVIIVCYVRIFRKLR 189
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672039459 200 RGPERHQPRGFPTLVLLVILLFL--------------FCGLPFGIFWLSKNLS---WHTPLYFYHFSFFMASVHSAAKPA 262
Cdd:cd00637  190 RHRRRIRSSSSNSSRRRRRRRERkvtktllivvvvflLCWLPYFILLLLDVFGpdpSPLPRILYFLALLLAYLNSAINPI 269

                 ....*
gi 672039459 263 IYFFL 267
Cdd:cd00637  270 IYAFF 274
7tmA_FFAR cd14983
free fatty acid receptors, member of the class A family of seven-transmembrane G ...
52-144 5.41e-04

free fatty acid receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes the free fatty acid receptors (FFARs) which bind free fatty acids (FFAs). They belong to the class A G-protein coupled receptors and are composed of three members, each encoded by a separate gene (FFAR1, FFAR2, and FFAR3). These genes and a fourth pseudogene, GPR42, are localized together on chromosome 19. FFAR1 is a receptor for medium- and long-chain FFAs, whereas FFAR2 and FFAR3 are receptors for short chain FFAs (SCFAs), which have different ligand affinities. FFAR1 directly mediates FFA stimulation of glucose-stimulated insulin secretion and also indirectly increases insulin secretion by enhancing the release of incretin. FFAR2 activation by SCFA suppresses adipose insulin signaling, which leads to the inhibition of fat accumulation in adipose tissue. FAAR3 is expressed in intestinal L cells, which produces glucagon-like peptide 1 (GLP-1) and peptide YY (PYY), suggesting that this receptor may be involved in energy homeostasis. FFARs are considered important components of the body's nutrient sensing mechanism, and therefore, these receptors are potential therapeutic targets for the treatment of metabolic disorders, such as type 2 diabetes and obesity.


Pssm-ID: 320114 [Multi-domain]  Cd Length: 278  Bit Score: 40.88  E-value: 5.41e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672039459  52 PFSIYLLDVACADLIFLCCHMVAIIpELLQDQLNFPEFVhISLIMLRFFCYI-VGLSLLVAISTEQCLATLFPSGY-LCR 129
Cdd:cd14983   35 PNVIYMINLCLSDLVFILSLPIKIV-EALSSAWTLPAVL-CPLYNLAHFSTLyASTCFLTAISAGRYLGVAFPIKYqLYK 112
                         90
                 ....*....|....*
gi 672039459 130 RPRYlTTCVCAFIWV 144
Cdd:cd14983  113 KPLY-SCLVCVAIWA 126
7tmA_purinoceptor-like cd14982
purinoceptor and its related proteins, member of the class A family of seven-transmembrane G ...
50-144 6.77e-04

purinoceptor and its related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; Members of this subfamily include lysophosphatidic acid receptor, P2 purinoceptor, protease-activated receptor, platelet-activating factor receptor, Epstein-Barr virus induced gene 2, proton-sensing G protein-coupled receptors, GPR35, and GPR55, among others. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341318 [Multi-domain]  Cd Length: 283  Bit Score: 40.71  E-value: 6.77e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672039459  50 RNPFSIYLLDVACADLIFLCCHMVAIIPELLQDQLNFPEFV-HISLIMLRFFCYIvGLSLLVAISTEQCLATLFPSGYL- 127
Cdd:cd14982   32 RSPTTIYMINLALADLLFVLTLPFRIYYYLNGGWWPFGDFLcRLTGLLFYINMYG-SILFLTCISVDRYLAVVHPLKSRr 110
                         90
                 ....*....|....*..
gi 672039459 128 CRRPRYlTTCVCAFIWV 144
Cdd:cd14982  111 LRRKRY-AVGVCAGVWI 126
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
50-144 1.54e-03

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 39.59  E-value: 1.54e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672039459   50 RNPFSIYLLDVACADLIFLCCHM-VAIIPELLQDQLNFPEFVHISLIMLRFFCYIVGLSLLVAISTEQCLATLFPSGYLC 128
Cdd:pfam00001  16 RTPTNIFLLNLAVADLLFSLLTLpFWLVYYLNHGDWPFGSALCKIVGALFVVNGYASILLLTAISIDRYLAIVHPLRYKR 95
                          90
                  ....*....|....*.
gi 672039459  129 RRPRYLTTCVCAFIWV 144
Cdd:pfam00001  96 RRTPRRAKVLILVIWV 111
7tmA_FFAR1 cd15169
free fatty acid receptor 1, member of the class A family of seven-transmembrane G ...
52-143 4.27e-03

free fatty acid receptor 1, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes the mammalian free fatty acid receptor 1 (FFAR1), also called GPR40. FFAR1 is a cell-surface receptor for medium- and long-chain free fatty acids (FFAs). The receptor is most potently activated by eicosatrienoic acid (C20:3), but can also be activated at micromolar concentrations of various fatty acids. FFAR1 directly mediates FFA stimulation of glucose-stimulated insulin secretion and indirectly increases insulin secretion by enhancing the release of incretin. Free fatty acid receptors (FFARs) belong to the class A G-protein coupled receptors and are comprised of three members, each encoded by a separate gene (FFAR1, FFAR2, and FFAR3). These genes and a fourth pseudogene, GPR42, are localized together on chromosome 19. FFARs are considered important components of the body's nutrient sensing mechanism, and therefore, these receptors are potential therapeutic targets for the treatment of metabolic disorders, such as type 2 diabetes and obesity.


Pssm-ID: 320297  Cd Length: 284  Bit Score: 38.07  E-value: 4.27e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672039459  52 PFSIYLLDVACADLIFLCCHMVAIIPELLQDQLNFPEFVHISLIMLRFFCYIVGLSLLVAISTEQCLATLFPSGYLC-RR 130
Cdd:cd15169   35 PSLVYALNLGCSDLLLTVSLPLKAVEALASGAWPLPASLCPVFAVAHFAPLYAGGGFLAALSAGRYLGAAFPLGYQAfRR 114
                         90
                 ....*....|...
gi 672039459 131 PRYlTTCVCAFIW 143
Cdd:cd15169  115 PCY-SWGVCAAIW 126
7tmA_FFAR2_FFAR3 cd15170
free fatty acid receptors 2, 3, and similar proteins, member of the class A family of ...
52-144 5.45e-03

free fatty acid receptors 2, 3, and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes free fatty acid receptor 2 (FFAR2), FFAR3, and similar proteins. They are a member of the class A G-protein coupled receptors that bind free fatty acids. The FFAR subfamily is composed of three receptors, each encoded by a separate gene (FFAR1, FFAR2, and FFAR3). These genes and a fourth pseudogene, GPR42, are localized together on chromosome 19. FFAR2 and FFAR3 are cell-surface receptors for short chain FFAs (SCFAs) with different ligand affinities, whereas FFAR1 is a receptor for medium- and long-chain FFAs. FFAR2 activation by SCFA suppresses adipose insulin signaling, which leads to inhibition of fat accumulation in adipose tissue. FAAR3 is expressed in intestinal L cells, which produces glucagon-like peptide 1 (GLP-1) and peptide YY (PYY), thus suggesting that this receptor may be involved in energy homeostasis. FFARs are considered important components of the body's nutrient sensing mechanism, and therefore, these receptors are potential therapeutic targets for the treatment of metabolic disorders, such as type 2 diabetes and obesity.


Pssm-ID: 320298  Cd Length: 278  Bit Score: 37.62  E-value: 5.45e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672039459  52 PFSIYLLDVACADLIFLCCHMVAIIPELLQDQLNFPEFVhISLIMLRFFCYIVGLSL-LVAISTEQCLATLFPSGY-LCR 129
Cdd:cd15170   35 PIDILLLNLTVSDLIFLLFLPFKMAEAASGMIWPLPYFL-CPLSSFIFFSTIYISTLfLTAISVERYLGVAFPIKYkLRR 113
                         90
                 ....*....|....*
gi 672039459 130 RPRYlTTCVCAFIWV 144
Cdd:cd15170  114 RPLY-AVIASVFFWV 127
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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