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Conserved domains on  [gi|578833002|ref|XP_006722716|]
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UPF0449 protein C19orf25 isoform X1 [Homo sapiens]

Protein Classification

UPF0449 family protein( domain architecture ID 10633486)

UPF0449 family protein similar to Homo sapiens protein C19orf25

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
UPF0449 pfam15136
Uncharacterized protein family UPF0449; This family of proteins is functionally ...
 6-103 8.21e-47

Uncharacterized protein family UPF0449; This family of proteins is functionally uncharacterized. This family of proteins is found in eukaryotes. There is a conserved LPTRP sequence motif.


:

Pssm-ID: 464522  Cd Length: 99  Bit Score: 145.89  E-value: 8.21e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833002    6 KKRVLLPTRPAPPTVEQILEDVRGAPAEDPVFTILAP-EDPPVPFRMMEDAEAPGEQLYQQSRAYVAANQRLQQAGNVLR 84
Cdd:pfam15136   1 KKRVVLPTRPEPPTVEQILEDVRGAPPDDPVFTILADnEDAPGPSGEDEDGEAEQEELYQQSRKYLEMNERLQEARNQLK 80

                          90
                  ....*....|....*....
gi 578833002   85 QRCELLQRAGEDLEREVAQ 103
Cdd:pfam15136  81 QKREELQTAGEELERDIEE 99
 
Name Accession Description Interval E-value
UPF0449 pfam15136
Uncharacterized protein family UPF0449; This family of proteins is functionally ...
 6-103 8.21e-47

Uncharacterized protein family UPF0449; This family of proteins is functionally uncharacterized. This family of proteins is found in eukaryotes. There is a conserved LPTRP sequence motif.


Pssm-ID: 464522  Cd Length: 99  Bit Score: 145.89  E-value: 8.21e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833002    6 KKRVLLPTRPAPPTVEQILEDVRGAPAEDPVFTILAP-EDPPVPFRMMEDAEAPGEQLYQQSRAYVAANQRLQQAGNVLR 84
Cdd:pfam15136   1 KKRVVLPTRPEPPTVEQILEDVRGAPPDDPVFTILADnEDAPGPSGEDEDGEAEQEELYQQSRKYLEMNERLQEARNQLK 80

                          90
                  ....*....|....*....
gi 578833002   85 QRCELLQRAGEDLEREVAQ 103
Cdd:pfam15136  81 QKREELQTAGEELERDIEE 99
 
Name Accession Description Interval E-value
UPF0449 pfam15136
Uncharacterized protein family UPF0449; This family of proteins is functionally ...
 6-103 8.21e-47

Uncharacterized protein family UPF0449; This family of proteins is functionally uncharacterized. This family of proteins is found in eukaryotes. There is a conserved LPTRP sequence motif.


Pssm-ID: 464522  Cd Length: 99  Bit Score: 145.89  E-value: 8.21e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833002    6 KKRVLLPTRPAPPTVEQILEDVRGAPAEDPVFTILAP-EDPPVPFRMMEDAEAPGEQLYQQSRAYVAANQRLQQAGNVLR 84
Cdd:pfam15136   1 KKRVVLPTRPEPPTVEQILEDVRGAPPDDPVFTILADnEDAPGPSGEDEDGEAEQEELYQQSRKYLEMNERLQEARNQLK 80

                          90
                  ....*....|....*....
gi 578833002   85 QRCELLQRAGEDLEREVAQ 103
Cdd:pfam15136  81 QKREELQTAGEELERDIEE 99
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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