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Concise Results
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Full Results
synaptopodin isoform X1 [Homo sapiens]
Protein Classification
List of domain hits
Name
Accession
Description
Interval
E-value
PHA03247 super family
cl33720 large tegument protein UL36; Provisional
743-1144
1.90e-06
large tegument protein UL36; Provisional
PHA03247 :Pssm-ID: 223021 [Multi-domain]
Cd Length: 3151
Bit Score: 52.63
E-value: 1.90e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578810794 743 S S HT P ELARCPSPTMSLPSSWKY P TNA P GAF RV ASRSP AR TPPASLYHGYL P E ngvl RP EPTKQP P YQLRPSLFVLS P IK 822
Cdd:PHA03247 2629 P S PS P AANEPDPHPPPTVPPPER P RDD P APG RV SRPRR AR RLGRAAQASSP P Q ---- RP RRRAAR P TVGSLTSLADP P PP 2704
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578810794 823 E P AKVS - P R A ASP A K P ss L DLV P NLPKG A L P PS PA L P R P srss P GLYTS P GQDSLQPTAVS PP yggdi SPVS P SRAWS P R 901
Cdd:PHA03247 2705 P P TPEP a P H A LVS A T P -- L PPG P AAARQ A S P AL PA A P A P ---- P AVPAG P ATPGGPARPAR PP ----- TTAG P PAPAP P A 2773
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578810794 902 A KQ A PR P SFS TR N A GIEAQDR RESLP TSP --- PWTPGASR P PSS L DGWV SP GPWE P GRG S SMSSP PP L PP P PP MSPSWSE 978
Cdd:PHA03247 2774 A PA A GP P RRL TR P A VASLSES RESLP SPW dpa DPPAAVLA P AAA L PPAA SP AGPL P PPT S AQPTA PP P PP G PP PPSLPLG 2853
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578810794 979 R SV S P LRP e TEA RPPSR QLQ A LL A RNIINAA RR KSASPR S AGA E N - PR P FSP P RA PP P P PP PPPP P P RMRS P Q P AR P GSA 1057
Cdd:PHA03247 2854 G SV A P GGD - VRR RPPSR SPA A KP A APARPPV RR LARPAV S RST E S f AL P PDQ P ER PP Q P QA PPPP Q P QPQP P P P PQ P QPP 2932
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578810794 1058 A vpgaaf A P I PR SPL P AG P SSCTSPRS - P LP A P P R P F L YRRS P TDSD V ------- SLD S EDSG A K S PGI L GYNICP R -- G 1127
Cdd:PHA03247 2933 P ------ P P P PR PQP P LA P TTDPAGAG e P SG A V P Q P W L GALV P GRVA V prfrvpq PAP S REAP A S S TPP L TGHSLS R vs S 3006
410
....*....|....*..
gi 578810794 1128 W NG SL R L KRGSL P AEA S 1144
Cdd:PHA03247 3007 W AS SL A L HEETD P PPV S 3023
PRK13914 super family
cl36314 invasion associated endopeptidase;
259-386
3.75e-05
invasion associated endopeptidase;
PRK13914 :Pssm-ID: 237555 [Multi-domain]
Cd Length: 481
Bit Score: 47.49
E-value: 3.75e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578810794 259 E KV A S E EEEV P L V vyl KEN AALL TA NGLHLSQNREA Q QSSP AP PP A EVHS PA ADV N Q N LASPSATLT T P T S N SSHNP P AT 338
Cdd:PRK13914 259 E AP A A E KQAA P V V --- KEN TNTN TA TTEKKETTTQQ Q TAPK AP TE A AKPA PA PST N T N ANKTNTNTN T N T N N TNTST P SK 335
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 578810794 339 DV N Q N PPAT vvpqslpl SSIQQ N SSEA Q LP SN GTGPA S K p S TLC A DG Q 386
Cdd:PRK13914 336 NT N T N TNSN -------- TNTNS N TNAN Q GS SN NNSNS S A - S AII A EA Q 374
PHA03247 super family
cl33720 large tegument protein UL36; Provisional
180-611
1.09e-04
large tegument protein UL36; Provisional
PHA03247 :Pssm-ID: 223021 [Multi-domain]
Cd Length: 3151
Bit Score: 46.86
E-value: 1.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578810794 180 R VN E FTLE S HGQ R GQK P S Q ESLRVL P SSLP G HAP G LSLS S TSL P EPGP P RH P S P qspdrgvpghsme GY S EE A SLLRHLE 259
Cdd:PHA03247 2576 R PS E PAVT S RAR R PDA P P Q SARPRA P VDDR G DPR G PAPP S PLP P DTHA P DP P P P ------------- SP S PA A NEPDPHP 2642
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578810794 260 KVASEEE E V P lvvylk ENAALLTANGLHLSQN R EAQQSSPAP PP AEVHSP AA dvnqnlasp SA T LTTP TS NSSHN PP ATD 339
Cdd:PHA03247 2643 PPTVPPP E R P ------ RDDPAPGRVSRPRRAR R LGRAAQASS PP QRPRRR AA --------- RP T VGSL TS LADPP PP PPT 2707
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578810794 340 VNQN P P A T V VPQS LP LSSIQQNSSEAQ LP SNGTG PA SK ----- P STLCADGQ P QAP A EEVRCSTLLIDKVST P ATT T STF 414
Cdd:PHA03247 2708 PEPA P H A L V SATP LP PGPAAARQASPA LP AAPAP PA VP agpat P GGPARPAR P PTT A GPPAPAPPAAPAAGP P RRL T RPA 2787
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578810794 415 SREATLIPS S R P PAS D FMSSSLLI d IQ P NTLVVS A DQEMSGRAAA T TPTKVYS evhftl AK PP SVVNRTARPF G IQ APGG 494
Cdd:PHA03247 2788 VASLSESRE S L P SPW D PADPPAAV - LA P AAALPP A ASPAGPLPPP T SAQPTAP ------ PP PP GPPPPSLPLG G SV APGG 2860
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578810794 495 T sqmerspmlerrh FGEKA P APQ P PSL P DRSP RP QRHIMS R s P M V E R RMMGQRS P -- AS ER R P LGNFTA PP TYTETLSTA 572
Cdd:PHA03247 2861 D ------------- VRRRP P SRS P AAK P AAPA RP PVRRLA R - P A V S R STESFAL P pd QP ER P P QPQAPP PP QPQPQPPPP 2926
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 578810794 573 P LASWVRS PP -- SYSV L Y P SS DP KSSHLKGQ AVP ASKT G I L 611
Cdd:PHA03247 2927 P QPQPPPP PP pr PQPP L A P TT DP AGAGEPSG AVP QPWL G A L 2967
Name
Accession
Description
Interval
E-value
PHA03247
PHA03247 large tegument protein UL36; Provisional
743-1144
1.90e-06
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain]
Cd Length: 3151
Bit Score: 52.63
E-value: 1.90e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578810794 743 S S HT P ELARCPSPTMSLPSSWKY P TNA P GAF RV ASRSP AR TPPASLYHGYL P E ngvl RP EPTKQP P YQLRPSLFVLS P IK 822
Cdd:PHA03247 2629 P S PS P AANEPDPHPPPTVPPPER P RDD P APG RV SRPRR AR RLGRAAQASSP P Q ---- RP RRRAAR P TVGSLTSLADP P PP 2704
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578810794 823 E P AKVS - P R A ASP A K P ss L DLV P NLPKG A L P PS PA L P R P srss P GLYTS P GQDSLQPTAVS PP yggdi SPVS P SRAWS P R 901
Cdd:PHA03247 2705 P P TPEP a P H A LVS A T P -- L PPG P AAARQ A S P AL PA A P A P ---- P AVPAG P ATPGGPARPAR PP ----- TTAG P PAPAP P A 2773
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578810794 902 A KQ A PR P SFS TR N A GIEAQDR RESLP TSP --- PWTPGASR P PSS L DGWV SP GPWE P GRG S SMSSP PP L PP P PP MSPSWSE 978
Cdd:PHA03247 2774 A PA A GP P RRL TR P A VASLSES RESLP SPW dpa DPPAAVLA P AAA L PPAA SP AGPL P PPT S AQPTA PP P PP G PP PPSLPLG 2853
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578810794 979 R SV S P LRP e TEA RPPSR QLQ A LL A RNIINAA RR KSASPR S AGA E N - PR P FSP P RA PP P P PP PPPP P P RMRS P Q P AR P GSA 1057
Cdd:PHA03247 2854 G SV A P GGD - VRR RPPSR SPA A KP A APARPPV RR LARPAV S RST E S f AL P PDQ P ER PP Q P QA PPPP Q P QPQP P P P PQ P QPP 2932
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578810794 1058 A vpgaaf A P I PR SPL P AG P SSCTSPRS - P LP A P P R P F L YRRS P TDSD V ------- SLD S EDSG A K S PGI L GYNICP R -- G 1127
Cdd:PHA03247 2933 P ------ P P P PR PQP P LA P TTDPAGAG e P SG A V P Q P W L GALV P GRVA V prfrvpq PAP S REAP A S S TPP L TGHSLS R vs S 3006
410
....*....|....*..
gi 578810794 1128 W NG SL R L KRGSL P AEA S 1144
Cdd:PHA03247 3007 W AS SL A L HEETD P PPV S 3023
PRK13914
PRK13914 invasion associated endopeptidase;
259-386
3.75e-05
invasion associated endopeptidase;
Pssm-ID: 237555 [Multi-domain]
Cd Length: 481
Bit Score: 47.49
E-value: 3.75e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578810794 259 E KV A S E EEEV P L V vyl KEN AALL TA NGLHLSQNREA Q QSSP AP PP A EVHS PA ADV N Q N LASPSATLT T P T S N SSHNP P AT 338
Cdd:PRK13914 259 E AP A A E KQAA P V V --- KEN TNTN TA TTEKKETTTQQ Q TAPK AP TE A AKPA PA PST N T N ANKTNTNTN T N T N N TNTST P SK 335
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 578810794 339 DV N Q N PPAT vvpqslpl SSIQQ N SSEA Q LP SN GTGPA S K p S TLC A DG Q 386
Cdd:PRK13914 336 NT N T N TNSN -------- TNTNS N TNAN Q GS SN NNSNS S A - S AII A EA Q 374
PHA03247
PHA03247 large tegument protein UL36; Provisional
180-611
1.09e-04
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain]
Cd Length: 3151
Bit Score: 46.86
E-value: 1.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578810794 180 R VN E FTLE S HGQ R GQK P S Q ESLRVL P SSLP G HAP G LSLS S TSL P EPGP P RH P S P qspdrgvpghsme GY S EE A SLLRHLE 259
Cdd:PHA03247 2576 R PS E PAVT S RAR R PDA P P Q SARPRA P VDDR G DPR G PAPP S PLP P DTHA P DP P P P ------------- SP S PA A NEPDPHP 2642
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578810794 260 KVASEEE E V P lvvylk ENAALLTANGLHLSQN R EAQQSSPAP PP AEVHSP AA dvnqnlasp SA T LTTP TS NSSHN PP ATD 339
Cdd:PHA03247 2643 PPTVPPP E R P ------ RDDPAPGRVSRPRRAR R LGRAAQASS PP QRPRRR AA --------- RP T VGSL TS LADPP PP PPT 2707
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578810794 340 VNQN P P A T V VPQS LP LSSIQQNSSEAQ LP SNGTG PA SK ----- P STLCADGQ P QAP A EEVRCSTLLIDKVST P ATT T STF 414
Cdd:PHA03247 2708 PEPA P H A L V SATP LP PGPAAARQASPA LP AAPAP PA VP agpat P GGPARPAR P PTT A GPPAPAPPAAPAAGP P RRL T RPA 2787
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578810794 415 SREATLIPS S R P PAS D FMSSSLLI d IQ P NTLVVS A DQEMSGRAAA T TPTKVYS evhftl AK PP SVVNRTARPF G IQ APGG 494
Cdd:PHA03247 2788 VASLSESRE S L P SPW D PADPPAAV - LA P AAALPP A ASPAGPLPPP T SAQPTAP ------ PP PP GPPPPSLPLG G SV APGG 2860
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578810794 495 T sqmerspmlerrh FGEKA P APQ P PSL P DRSP RP QRHIMS R s P M V E R RMMGQRS P -- AS ER R P LGNFTA PP TYTETLSTA 572
Cdd:PHA03247 2861 D ------------- VRRRP P SRS P AAK P AAPA RP PVRRLA R - P A V S R STESFAL P pd QP ER P P QPQAPP PP QPQPQPPPP 2926
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 578810794 573 P LASWVRS PP -- SYSV L Y P SS DP KSSHLKGQ AVP ASKT G I L 611
Cdd:PHA03247 2927 P QPQPPPP PP pr PQPP L A P TT DP AGAGEPSG AVP QPWL G A L 2967
Name
Accession
Description
Interval
E-value
PHA03247
PHA03247 large tegument protein UL36; Provisional
743-1144
1.90e-06
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain]
Cd Length: 3151
Bit Score: 52.63
E-value: 1.90e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578810794 743 S S HT P ELARCPSPTMSLPSSWKY P TNA P GAF RV ASRSP AR TPPASLYHGYL P E ngvl RP EPTKQP P YQLRPSLFVLS P IK 822
Cdd:PHA03247 2629 P S PS P AANEPDPHPPPTVPPPER P RDD P APG RV SRPRR AR RLGRAAQASSP P Q ---- RP RRRAAR P TVGSLTSLADP P PP 2704
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578810794 823 E P AKVS - P R A ASP A K P ss L DLV P NLPKG A L P PS PA L P R P srss P GLYTS P GQDSLQPTAVS PP yggdi SPVS P SRAWS P R 901
Cdd:PHA03247 2705 P P TPEP a P H A LVS A T P -- L PPG P AAARQ A S P AL PA A P A P ---- P AVPAG P ATPGGPARPAR PP ----- TTAG P PAPAP P A 2773
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578810794 902 A KQ A PR P SFS TR N A GIEAQDR RESLP TSP --- PWTPGASR P PSS L DGWV SP GPWE P GRG S SMSSP PP L PP P PP MSPSWSE 978
Cdd:PHA03247 2774 A PA A GP P RRL TR P A VASLSES RESLP SPW dpa DPPAAVLA P AAA L PPAA SP AGPL P PPT S AQPTA PP P PP G PP PPSLPLG 2853
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578810794 979 R SV S P LRP e TEA RPPSR QLQ A LL A RNIINAA RR KSASPR S AGA E N - PR P FSP P RA PP P P PP PPPP P P RMRS P Q P AR P GSA 1057
Cdd:PHA03247 2854 G SV A P GGD - VRR RPPSR SPA A KP A APARPPV RR LARPAV S RST E S f AL P PDQ P ER PP Q P QA PPPP Q P QPQP P P P PQ P QPP 2932
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578810794 1058 A vpgaaf A P I PR SPL P AG P SSCTSPRS - P LP A P P R P F L YRRS P TDSD V ------- SLD S EDSG A K S PGI L GYNICP R -- G 1127
Cdd:PHA03247 2933 P ------ P P P PR PQP P LA P TTDPAGAG e P SG A V P Q P W L GALV P GRVA V prfrvpq PAP S REAP A S S TPP L TGHSLS R vs S 3006
410
....*....|....*..
gi 578810794 1128 W NG SL R L KRGSL P AEA S 1144
Cdd:PHA03247 3007 W AS SL A L HEETD P PPV S 3023
PRK13914
PRK13914 invasion associated endopeptidase;
259-386
3.75e-05
invasion associated endopeptidase;
Pssm-ID: 237555 [Multi-domain]
Cd Length: 481
Bit Score: 47.49
E-value: 3.75e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578810794 259 E KV A S E EEEV P L V vyl KEN AALL TA NGLHLSQNREA Q QSSP AP PP A EVHS PA ADV N Q N LASPSATLT T P T S N SSHNP P AT 338
Cdd:PRK13914 259 E AP A A E KQAA P V V --- KEN TNTN TA TTEKKETTTQQ Q TAPK AP TE A AKPA PA PST N T N ANKTNTNTN T N T N N TNTST P SK 335
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 578810794 339 DV N Q N PPAT vvpqslpl SSIQQ N SSEA Q LP SN GTGPA S K p S TLC A DG Q 386
Cdd:PRK13914 336 NT N T N TNSN -------- TNTNS N TNAN Q GS SN NNSNS S A - S AII A EA Q 374
PHA03247
PHA03247 large tegument protein UL36; Provisional
180-611
1.09e-04
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain]
Cd Length: 3151
Bit Score: 46.86
E-value: 1.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578810794 180 R VN E FTLE S HGQ R GQK P S Q ESLRVL P SSLP G HAP G LSLS S TSL P EPGP P RH P S P qspdrgvpghsme GY S EE A SLLRHLE 259
Cdd:PHA03247 2576 R PS E PAVT S RAR R PDA P P Q SARPRA P VDDR G DPR G PAPP S PLP P DTHA P DP P P P ------------- SP S PA A NEPDPHP 2642
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578810794 260 KVASEEE E V P lvvylk ENAALLTANGLHLSQN R EAQQSSPAP PP AEVHSP AA dvnqnlasp SA T LTTP TS NSSHN PP ATD 339
Cdd:PHA03247 2643 PPTVPPP E R P ------ RDDPAPGRVSRPRRAR R LGRAAQASS PP QRPRRR AA --------- RP T VGSL TS LADPP PP PPT 2707
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578810794 340 VNQN P P A T V VPQS LP LSSIQQNSSEAQ LP SNGTG PA SK ----- P STLCADGQ P QAP A EEVRCSTLLIDKVST P ATT T STF 414
Cdd:PHA03247 2708 PEPA P H A L V SATP LP PGPAAARQASPA LP AAPAP PA VP agpat P GGPARPAR P PTT A GPPAPAPPAAPAAGP P RRL T RPA 2787
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578810794 415 SREATLIPS S R P PAS D FMSSSLLI d IQ P NTLVVS A DQEMSGRAAA T TPTKVYS evhftl AK PP SVVNRTARPF G IQ APGG 494
Cdd:PHA03247 2788 VASLSESRE S L P SPW D PADPPAAV - LA P AAALPP A ASPAGPLPPP T SAQPTAP ------ PP PP GPPPPSLPLG G SV APGG 2860
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578810794 495 T sqmerspmlerrh FGEKA P APQ P PSL P DRSP RP QRHIMS R s P M V E R RMMGQRS P -- AS ER R P LGNFTA PP TYTETLSTA 572
Cdd:PHA03247 2861 D ------------- VRRRP P SRS P AAK P AAPA RP PVRRLA R - P A V S R STESFAL P pd QP ER P P QPQAPP PP QPQPQPPPP 2926
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 578810794 573 P LASWVRS PP -- SYSV L Y P SS DP KSSHLKGQ AVP ASKT G I L 611
Cdd:PHA03247 2927 P QPQPPPP PP pr PQPP L A P TT DP AGAGEPSG AVP QPWL G A L 2967
PHA03247
PHA03247 large tegument protein UL36; Provisional
294-596
3.14e-04
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain]
Cd Length: 3151
Bit Score: 45.31
E-value: 3.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578810794 294 A Q Q S SPA P P -- PA EVHS PA ADVNQNLASPS A TLT T PTSNSSHN PPA TDVNQN P PATVV P QSLP LS SIQQNSSEAQL P SNG 371
Cdd:PHA03247 2728 A R Q A SPA L P aa PA PPAV PA GPATPGGPARP A RPP T TAGPPAPA PPA APAAGP P RRLTR P AVAS LS ESRESLPSPWD P ADP 2807
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578810794 372 TGPASK P STLCADGQPQ A PAEEVRC S TLLIDKVST P ATTTSTFSREATLI P ---- SS RPP A sdfmsssllidi QPNTLVV 447
Cdd:PHA03247 2808 PAAVLA P AAALPPAASP A GPLPPPT S AQPTAPPPP P GPPPPSLPLGGSVA P ggdv RR RPP S ------------ RSPAAKP 2875
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578810794 448 S A DQEMSG R AA A TTPTKVYS E vhf TL A K PP SVVN R TAR P FGIQA P GGTS Q MERS P MLERRH fg EKA P A PQPP SL P DRS P R 527
Cdd:PHA03247 2876 A A PARPPV R RL A RPAVSRST E --- SF A L PP DQPE R PPQ P QAPPP P QPQP Q PPPP P QPQPPP -- PPP P R PQPP LA P TTD P A 2950
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578810794 528 PQRHIMSRS P ------ M V ER R MMGQ R SPASERR P LGNFT A PP T YTE T LSTAP - LA SW VR S -------- PP SY S V --- L Y P 589
Cdd:PHA03247 2951 GAGEPSGAV P qpwlga L V PG R VAVP R FRVPQPA P SREAP A SS T PPL T GHSLS r VS SW AS S lalheetd PP PV S L kqt L W P 3030
....*..
gi 578810794 590 SS D PKS S 596
Cdd:PHA03247 3031 PD D TED S 3037
PRK12323
PRK12323 DNA polymerase III subunit gamma/tau;
753-956
1.32e-03
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain]
Cd Length: 700
Bit Score: 42.94
E-value: 1.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578810794 753 P SPTMSL P SSWKY P TN A PG A FRVASRSPARTP PA SLYHGYLPENG V LRPEPTKQ P PYQLRPSLFVL S PIKEPAKVS P RA A 832
Cdd:PRK12323 374 P ATAAAA P VAQPA P AA A AP A AAAPAPAAPPAA PA AAPAAAAAARA V AAAPARRS P APEALAAARQA S ARGPGGAPA P AP A 453
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578810794 833 SP A K P SS l DLV P NLPKGALPPSP A LPR P S R SS P GLYTS P GQ D SLQ P TAVS PP YGGDIS P VS P SR A WSPRAKQA prpsf ST 912
Cdd:PRK12323 454 PA A A P AA - AAR P AAAGPRPVAAA A AAA P A R AA P AAAPA P AD D DPP P WEEL PP EFASPA P AQ P DA A PAGWVAES ----- IP 527
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 578810794 913 RN A GIEAQ D RR E S L PTS P PWT P g A S R PPSSLDGW V S P G P WEPGR 956
Cdd:PRK12323 528 DP A TADPD D AF E T L APA P AAA P - A P R AAAATEPV V A P R P PRASA 570
PRK07764
PRK07764 DNA polymerase III subunits gamma and tau; Validated
797-993
1.99e-03
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain]
Cd Length: 824
Bit Score: 42.28
E-value: 1.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578810794 797 G VLR P EPTKQ P PYQL RP S lfvl S P IKEP A KVS P RA A SP A KPSSLDLVPNL P KG A l P P SPALPRPSRSSPGLYTSPGQDSL 876
Cdd:PRK07764 599 G PPA P ASSGP P EEAA RP A ---- A P AAPA A PAA P AP A GA A AAPAEASAAPA P GV A - A P EHHPKHVAVPDASDGGDGWPAKA 673
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578810794 877 QPT A VSP P YGGDISPVSPSR A WSPR A KQ AP R P SFSTR nag IEAQ D RRESL P TSPPWTPG A SR P PSSLDGWVS P G P WE P GR 956
Cdd:PRK07764 674 GGA A PAA P PPAPAPAAPAAP A GAAP A QP AP A P AATPP --- AGQA D DPAAQ P PQAAQGAS A PS P AADDPVPLP P E P DD P PD 750
170 180 190
....*....|....*....|....*....|....*..
gi 578810794 957 GSSMSSP PP L PP P P PMSPSWSERSVSPLRP E T E ARPP 993
Cdd:PRK07764 751 PAGAPAQ PP P PP A P APAAAPAAAPPPSPPS E E E EMAE 787
PHA03307
PHA03307 transcriptional regulator ICP4; Provisional
794-1117
3.86e-03
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain]
Cd Length: 1352
Bit Score: 41.70
E-value: 3.86e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578810794 794 P EN G VLRPE P TKQPPYQLRP SL FV L S P IKEPAKV SP RAAS P AK P SSLDLV P NLPKGALP P S P A L PRPS R SSPGLYTS P GQ 873
Cdd:PHA03307 71 P PP G PGTEA P ANESRSTPTW SL ST L A P ASPAREG SP TPPG P SS P DPPPPT P PPASPPPS P A P D L SEML R PVGSPGPP P AA 150
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578810794 874 DSLQPT A VSPP ------ YGGDISPVSP S RAWSP RA KQA P RPSFSTRNAGIE A QD R re SLPT S P P WTPG AS R P pssldgwv 947
Cdd:PHA03307 151 SPPAAG A SPAA vasdaa SSRQAALPLS S PEETA RA PSS P PAEPPPSTPPAA A SP R -- PPRR S S P ISAS AS S P -------- 220
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578810794 948 S P G P WEPGRGSSMS S PPPLPPPPPMSPS W SERSVS PL RPETEARP P S R QLQ A LLA rnii N AARRKSASPR S AGAENP R PF 1027
Cdd:PHA03307 221 A P A P GRSAADDAGA S SSDSSSSESSGCG W GPENEC PL PRPAPITL P T R IWE A SGW ---- N GPSSRPGPAS S SSSPRE R SP 296
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578810794 1028 SP PRAP P PPP P P P PP P PRMR S PQPA R PG S AAVPGAAFAPIPRSPLPA GPS SC tsp RSP L P AP P R P FLYRR SP TDSDVSLD 1107
Cdd:PHA03307 297 SP SPSS P GSG P A P SS P RASS S SSSS R ES S SSSTSSSSESSRGAAVSP GPS PS --- RSP S P SR P P P PADPS SP RKRPRPSR 373
330
....*....|
gi 578810794 1108 SED S G A K S P G 1117
Cdd:PHA03307 374 APS S P A A S A G 383
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
