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Concise Results
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neuroblast differentiation-associated protein AHNAK isoform X1 [Mus musculus]
Protein Classification
List of domain hits
Name
Accession
Description
Interval
E-value
TamB super family
cl34519 Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, ...
4928-5431
4.20e-10
Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, and vesicular transport];
COG2911 :Pssm-ID: 442155 [Multi-domain]
Cd Length: 766
Bit Score: 66.60
E-value: 4.20e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 4928 VE A SGPKIE G N L KGPKVQANLDTP D INIEG - PEAKIKAPSFSVSA ----- PQVSIP D VNVNLKG -------- P KIK G DVP 4993
Cdd:COG2911 58 LD A PEGALS G L L DLVQATLDAEGL D LASSA l DDLDLRSGGNRLTL sgnls AASLDG D LDLDAPD ladlaall P GLA G SLS 137
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 4994 SV GL EGPNI D LQ G PEGKIKF pkfslp KIS A P G VKMEGGSTEI G AQMPSLE G G LS TS D m K L EGPHLS L KG P G vdlp SVDLS 5073
Cdd:COG2911 138 GD GL DSLSL D AD G TLAQHRL ------ DLD A K G EPASLSLALS G GLDRDDG G T LS RL D - F L NTGRWG L AA P A ---- TLSYD 206
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 5074 MPK V SGPD L DMNLK G P - S L K G D LG AS s PSMK L HAPG L D L KGVG gkv HIGA D GVKM SG - IDATTA LS V G APDVTLKG - P SL 5150
Cdd:COG2911 207 DGR V TLGP L CLAGG G S l C L S G T LG GT - LDLQ L RLKN L P L ALLN --- PFLP D DLGL SG t LNGDAD LS G G LANPQGDA s L SL 282
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 5151 Q GDL AVSGDIKCPKVSVATPDVSLEASE G AVK L phmklp QFGISTP G SD - L DINIKG P QVC G ELKGSGM D V NL KGPQISA 5229
Cdd:COG2911 283 S GDL TLNDGLGGLPLGLGDLTLNARLAN G RLT L ------ DLTLDGG G LG t L SLSGSV P LAD G LPPSAPL D G NL RLDNLDL 356
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 5230 ------- P SMDFN L E G p KVK G S L GAA G E L KG P AIG G -- A L PGISIQG P EGNLQMPG I KA sgc DVKLSSGQISGPEIKG D L 5300
Cdd:COG2911 357 allnpll P GVLER L S G - QLN G D L RLS G T L AA P QLN G ql T L DDGRLKL P ALGVRLTD I NL --- RLRFDGDRLTLDGLTA D S 432
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 5301 K G SG L G L H G A V P -------- D IGV KG PSFN V --------- A S PESDFGVSLK GP KVK G G V D V SGG - VSV P DINLGEGHM S 5362
Cdd:COG2911 433 G G GT L T L S G T V D ldglswpa D LTL KG DNLR V lnppdytat V S GDLTLTGTPD GP TLS G N V T V PRA r ITL P ELPPSAVSL S 512
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 5363 ---- V KGSGV E WKGPQVSSS L N LD TS --- K L AGNLHFS G P ---- KIE GD VKGGQ T GLQG P G L S vsgpq G HLESES G KVTF 5431
Cdd:COG2911 513 ddvv V VNRPP E PVPEEEAAG L P LD LD lnv N L GDDVRVR G F glda RLG GD LRLTG T PGGA P R L T ----- G EINLVR G RYNA 587
AsmA super family
cl34531 Uncharacterized conserved protein AsmA involved in outer membrane biogenesis [Cell wall ...
3994-4427
1.60e-06
Uncharacterized conserved protein AsmA involved in outer membrane biogenesis [Cell wall/membrane/envelope biogenesis];
COG2982 :Pssm-ID: 442221 [Multi-domain]
Cd Length: 491
Bit Score: 54.66
E-value: 1.60e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 3994 DL DV S - G P KVDIEGPN V NIEG P E G klkgpk F KM P D L h LK A PKI smp E I DL N L k G P K L K G DVD V slpkvegdlkg P E VDIK 4072
Cdd:COG2982 55 DL SL S l F P WPGVTLGD V TLSN P D G ------ F GG P P L - AS A ERL --- E L DL A L - L P L L S G ELE V ----------- D E ITLD 112
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 4073 GP KVDISA pdm D VH G - PD W HLKMPKMKMPK fsmpgf K AE GPEVDVNLPKAD I D --------- V SG PKVDI D VPDVNIE GP 4142
Cdd:COG2982 113 GP VINLER --- D AD G r AN W DFLLAAAAAAA ------ D AE ASAWSLDIGRLE I T dgrlvydda A SG ADLTL D DLNLTLS GP 183
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 4143 D ---------- AK L K G PKFKM p EMN I KAPKISM P - DFD L H L KGPKVKGDV D -- AS L PKME G E L KGP G IDIK -- CPTVDID 4207
Cdd:COG2982 184 S ldgpfrlsgs GR L N G QPLTL - DGK I GGLLALG P y PLK L D L RSGDLRLSL D gt VD L AGLD G Q L ALS G PSLR dl LALLGVT 262
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 4208 T P dvni E VPEGK L K G pkfkmp DMHIKAPKISMP D FDLN L KGPKVK GD VDLAL --- P NVE GDL KGPEI D I -------- EGP 4276
Cdd:COG2982 263 L P ---- E PGPFS L S G ------ RLTADGDRLRLE D LKGT L GDSDLT GD LSVTG gdr P ALT GDL ASDRL D L ddllpaap AAA 332
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 4277 EGKLKGPKFKV PD VQFKTPQISMS D I D LNVKGPKI K - G D L DI sipkpe GDL KG p KVDIKGPK LD I D TPDIDIH G pe G K L K 4355
Cdd:COG2982 333 AAGAPAAARGL PD APLDLSALRAL D A D VRLSADSL K l G G L PL ------ GDL AA - HLTLDDGR LD L D PLSAGLY G -- G T L S 403
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 569007628 4356 G pkfkmp D L H L K A PK ismpevdlnl KG P K V KGDV --- D V S L PKVEG DL K G PE v DIK G p KVDISA p D VDVH G PDWH 4427
Cdd:COG2982 404 G ------ S L T L D A RG ---------- DP P R V ALKL sls G V D L GPLLP DL A G FD - RLS G - TLNGDL - D LSGT G NSVA 459
PDZ_canonical super family
cl49608 canonical PDZ domain; Canonical PDZ (PSD-95 (Postsynaptic density protein 95), Dlg (Discs ...
23-57
4.58e-04
canonical PDZ domain; Canonical PDZ (PSD-95 (Postsynaptic density protein 95), Dlg (Discs large protein), and ZO-1 (Zonula occludens-1)) domain. PDZ domains usually bind to short specific peptide sequences located at the C-terminal end of their partner proteins known as PDZ binding motifs. These domains can also interact with internal peptide motifs and certain lipids, and can take part in a head-to-tail oligomerization with other PDZ domains. The PDZ superfamily includes canonical PDZ domains as well as those with circular permutations and domain swapping mediated by beta-strands. The canonical PDZ domain contains six beta-strands A-F and two alpha-helices (alpha-helix 1 and 2), arranged in the order: beta-strands A, B, C, alpha-helix 1, beta-strands D, E, alpha-helix 2 and beta-strand F.
cd06716 :Pssm-ID: 483948 [Multi-domain]
Cd Length: 88
Bit Score: 42.26
E-value: 4.58e-04
10 20 30 40
....*....|....*....|....*....|....*....|
gi 569007628 23 GLT IAQ R D D ----- G VF V Q EV MQ NS P AA RT G VVK EGDQI V 57
Cdd:cd06716 18 GLT LCY R T D deedt G IY V S EV DP NS I AA KD G RIR EGDQI L 57
TamB super family
cl34519 Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, ...
2896-3384
7.05e-04
Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, and vesicular transport];
COG2911 :Pssm-ID: 442155 [Multi-domain]
Cd Length: 766
Bit Score: 46.19
E-value: 7.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 2896 PEV D VNLPKAD L DV SG P -------- KV D I D V PD VN -------- IE G p DAKLK G pkfk MPEVNIK A - PKISMPD L N L NL KG 2958
Cdd:COG2911 89 DDL D LRSGGNR L TL SG N lsaasldg DL D L D A PD LA dlaallpg LA G - SLSGD G ---- LDSLSLD A d GTLAQHR L D L DA KG 163
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 2959 PNVKGDVDV S ---------- IPNIE g D L KGPSLDIKS P - K L DVNAPDIDV ------ H G PEGK L K G PKLKMP D MHVSMPKI 3021
Cdd:COG2911 164 EPASLSLAL S ggldrddggt LSRLD - F L NTGRWGLAA P a T L SYDDGRVTL gplcla G G GSLC L S G TLGGTL D LQLRLKNL 242
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 3022 SMPEI ------ DL N L K G s KVK GD V D I SG ---- P KLEGDIKVP --- RVDLKGPEVDISAPKVNIDGKAKKS R FK L pkfnfs 3088
Cdd:COG2911 243 PLALL npflpd DL G L S G - TLN GD A D L SG glan P QGDASLSLS gdl TLNDGLGGLPLGLGDLTLNARLANG R LT L ------ 315
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 3089 GSKVQTPEVDV klkk PDVDITA P KV D INA P EVEVQ G KVKGSKFKMPF L S isspk VSM P D V ELN L K G p KVK GDL DAA G --- 3165
Cdd:COG2911 316 DLTLDGGGLGT ---- LSLSGSV P LA D GLP P SAPLD G NLRLDNLDLAL L N ----- PLL P G V LER L S G - QLN GDL RLS G tla 385
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 3166 - P N L E G DFKGPKVDI K A P D -- V Q L NAPDVDVH gpewnlkmpkmkmpkfg VS G IKAEGPDVAV D LPK G DINIE G p SMNIE G 3242
Cdd:COG2911 386 a P Q L N G QLTLDDGRL K L P A lg V R L TDINLRLR ----------------- FD G DRLTLDGLTA D SGG G TLTLS G - TVDLD G 447
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 3243 PELNVE cpe GS LKG PKFK --- M P EMNIKA pkismp DI DL N L K G PK vkgdvdv SL P KVE G EIK VP EVD I KG P KVDI dvpdv 3319
Cdd:COG2911 448 LSWPAD --- LT LKG DNLR vln P P DYTATV ------ SG DL T L T G TP ------- DG P TLS G NVT VP RAR I TL P ELPP ----- 506
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 569007628 3320 dvhgpdwhlkmpkvkmpkf S MPGFKGEGPE V DVSLPKANIDVSGP --- KV D ID V --- P DV NIE G P -- DA K L K G 3384
Cdd:COG2911 507 ------------------- S AVSLSDDVVV V NRPPEPVPEEEAAG lpl DL D LN V nlg D DV RVR G F gl DA R L G G 560
Herpes_BLLF1 super family
cl37540 Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ...
4591-4783
9.61e-04
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
pfam05109 :Pssm-ID: 282904 [Multi-domain]
Cd Length: 886
Bit Score: 46.06
E-value: 9.61e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 4591 G P KVDIDV P DV N VE G --- P DMKVKG P KFRMPEI N IK AP KIS mpdvdlelk GP K V KG A f D GSV P KIE GT LK G PEIDMKG P G 4667
Cdd:pfam05109 424 A P ESTTTS P TL N TT G faa P NTTTGL P SSTHVPT N LT AP AST --------- GP T V ST A - D VTS P TPA GT TS G ASPVTPS P S 493
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 4668 LDFE G PDA K ls G P NLKM P SLE V SV P KITGPDANVHLK TP KVGISA P K LG G gevdl KG P KVDLE TP SLDVHMES P DINIEG 4747
Cdd:pfam05109 494 PRDN G TES K -- A P DMTS P TSA V TT P TPNATSPTPAVT TP TPNATS P T LG K ----- TS P TSAVT TP TPNATSPT P AVTTPT 566
170 180 190
....*....|....*....|....*....|....*.
gi 569007628 4748 P DVKV P KFK K PKFGFGAKS P KADIKT PTV DV T V P E A 4783
Cdd:pfam05109 567 P NATI P TLG K TSPTSAVTT P TPNATS PTV GE T S P Q A 602
AsmA super family
cl34531 Uncharacterized conserved protein AsmA involved in outer membrane biogenesis [Cell wall ...
1025-1468
2.29e-03
Uncharacterized conserved protein AsmA involved in outer membrane biogenesis [Cell wall/membrane/envelope biogenesis];
COG2982 :Pssm-ID: 442221 [Multi-domain]
Cd Length: 491
Bit Score: 44.26
E-value: 2.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 1025 D VDI S V - P KLDISAP D LN L EG P E G KLKG P KFKMPEM hfkapkvslp DV DL D L kgpkmkgnldms A P KIE GE MKAPDVDIK 1103
Cdd:COG2982 55 D LSL S L f P WPGVTLG D VT L SN P D G FGGP P LASAERL ---------- EL DL A L ------------ L P LLS GE LEVDEITLD 112
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 1104 GP NVDI kap E V D VQ G - PE W SLKMPKMKMPK fsmptl KG E GPDVDVSLPKAT I D --------- V SG PK L DIETSDVS L E GP 1173
Cdd:COG2982 113 GP VINL --- E R D AD G r AN W DFLLAAAAAAA ------ DA E ASAWSLDIGRLE I T dgrlvydda A SG AD L TLDDLNLT L S GP 183
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 1174 E gklkgpkfkm P D MH F KA pkismp DVDLNMK G PKVKG D MDVTVPKIE G EMKV - P D VDIKGPKVDISA p D VD VQ G P D WH L K 1252
Cdd:COG2982 184 S ---------- L D GP F RL ------ SGSGRLN G QPLTL D GKIGGLLAL G PYPL k L D LRSGDLRLSLDG - T VD LA G L D GQ L A 246
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 1253 MPKMKMPKF s MPGFKAEG PE VSLPKADLDVSGPKVDIDVP D VNIEGP D AK L K G --------- P KF kmp EMNIKAPKISMP 1323
Cdd:COG2982 247 LSGPSLRDL - LALLGVTL PE PGPFSLSGRLTADGDRLRLE D LKGTLG D SD L T G dlsvtggdr P AL --- TGDLASDRLDLD 322
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 1324 DL hlk G P KVKGDVDVSL P KVEGD L KGPDI D IKG pkmd IN A P D M DV Q gpdwh L KMPKM K MPKFSM pgfkaegpevdv NLPK 1403
Cdd:COG2982 323 DL --- L P AAPAAAAAGA P AAARG L PDAPL D LSA ---- LR A L D A DV R ----- L SADSL K LGGLPL ------------ GDLA 378
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 569007628 1404 A DIDVSGPKV D IE ap DV S IEGPE G K L K G P --- KFKMPDMHFKA p K I S MPD VDL ----- NIK G PK --- G KADV D AS L 1468
Cdd:COG2982 379 A HLTLDDGRL D LD -- PL S AGLYG G T L S G S ltl DARGDPPRVAL - K L S LSG VDL gpllp DLA G FD rls G TLNG D LD L 451
Name
Accession
Description
Interval
E-value
TamB
COG2911 Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, ...
4928-5431
4.20e-10
Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442155 [Multi-domain]
Cd Length: 766
Bit Score: 66.60
E-value: 4.20e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 4928 VE A SGPKIE G N L KGPKVQANLDTP D INIEG - PEAKIKAPSFSVSA ----- PQVSIP D VNVNLKG -------- P KIK G DVP 4993
Cdd:COG2911 58 LD A PEGALS G L L DLVQATLDAEGL D LASSA l DDLDLRSGGNRLTL sgnls AASLDG D LDLDAPD ladlaall P GLA G SLS 137
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 4994 SV GL EGPNI D LQ G PEGKIKF pkfslp KIS A P G VKMEGGSTEI G AQMPSLE G G LS TS D m K L EGPHLS L KG P G vdlp SVDLS 5073
Cdd:COG2911 138 GD GL DSLSL D AD G TLAQHRL ------ DLD A K G EPASLSLALS G GLDRDDG G T LS RL D - F L NTGRWG L AA P A ---- TLSYD 206
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 5074 MPK V SGPD L DMNLK G P - S L K G D LG AS s PSMK L HAPG L D L KGVG gkv HIGA D GVKM SG - IDATTA LS V G APDVTLKG - P SL 5150
Cdd:COG2911 207 DGR V TLGP L CLAGG G S l C L S G T LG GT - LDLQ L RLKN L P L ALLN --- PFLP D DLGL SG t LNGDAD LS G G LANPQGDA s L SL 282
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 5151 Q GDL AVSGDIKCPKVSVATPDVSLEASE G AVK L phmklp QFGISTP G SD - L DINIKG P QVC G ELKGSGM D V NL KGPQISA 5229
Cdd:COG2911 283 S GDL TLNDGLGGLPLGLGDLTLNARLAN G RLT L ------ DLTLDGG G LG t L SLSGSV P LAD G LPPSAPL D G NL RLDNLDL 356
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 5230 ------- P SMDFN L E G p KVK G S L GAA G E L KG P AIG G -- A L PGISIQG P EGNLQMPG I KA sgc DVKLSSGQISGPEIKG D L 5300
Cdd:COG2911 357 allnpll P GVLER L S G - QLN G D L RLS G T L AA P QLN G ql T L DDGRLKL P ALGVRLTD I NL --- RLRFDGDRLTLDGLTA D S 432
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 5301 K G SG L G L H G A V P -------- D IGV KG PSFN V --------- A S PESDFGVSLK GP KVK G G V D V SGG - VSV P DINLGEGHM S 5362
Cdd:COG2911 433 G G GT L T L S G T V D ldglswpa D LTL KG DNLR V lnppdytat V S GDLTLTGTPD GP TLS G N V T V PRA r ITL P ELPPSAVSL S 512
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 5363 ---- V KGSGV E WKGPQVSSS L N LD TS --- K L AGNLHFS G P ---- KIE GD VKGGQ T GLQG P G L S vsgpq G HLESES G KVTF 5431
Cdd:COG2911 513 ddvv V VNRPP E PVPEEEAAG L P LD LD lnv N L GDDVRVR G F glda RLG GD LRLTG T PGGA P R L T ----- G EINLVR G RYNA 587
AsmA
COG2982 Uncharacterized conserved protein AsmA involved in outer membrane biogenesis [Cell wall ...
3994-4427
1.60e-06
Uncharacterized conserved protein AsmA involved in outer membrane biogenesis [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442221 [Multi-domain]
Cd Length: 491
Bit Score: 54.66
E-value: 1.60e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 3994 DL DV S - G P KVDIEGPN V NIEG P E G klkgpk F KM P D L h LK A PKI smp E I DL N L k G P K L K G DVD V slpkvegdlkg P E VDIK 4072
Cdd:COG2982 55 DL SL S l F P WPGVTLGD V TLSN P D G ------ F GG P P L - AS A ERL --- E L DL A L - L P L L S G ELE V ----------- D E ITLD 112
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 4073 GP KVDISA pdm D VH G - PD W HLKMPKMKMPK fsmpgf K AE GPEVDVNLPKAD I D --------- V SG PKVDI D VPDVNIE GP 4142
Cdd:COG2982 113 GP VINLER --- D AD G r AN W DFLLAAAAAAA ------ D AE ASAWSLDIGRLE I T dgrlvydda A SG ADLTL D DLNLTLS GP 183
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 4143 D ---------- AK L K G PKFKM p EMN I KAPKISM P - DFD L H L KGPKVKGDV D -- AS L PKME G E L KGP G IDIK -- CPTVDID 4207
Cdd:COG2982 184 S ldgpfrlsgs GR L N G QPLTL - DGK I GGLLALG P y PLK L D L RSGDLRLSL D gt VD L AGLD G Q L ALS G PSLR dl LALLGVT 262
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 4208 T P dvni E VPEGK L K G pkfkmp DMHIKAPKISMP D FDLN L KGPKVK GD VDLAL --- P NVE GDL KGPEI D I -------- EGP 4276
Cdd:COG2982 263 L P ---- E PGPFS L S G ------ RLTADGDRLRLE D LKGT L GDSDLT GD LSVTG gdr P ALT GDL ASDRL D L ddllpaap AAA 332
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 4277 EGKLKGPKFKV PD VQFKTPQISMS D I D LNVKGPKI K - G D L DI sipkpe GDL KG p KVDIKGPK LD I D TPDIDIH G pe G K L K 4355
Cdd:COG2982 333 AAGAPAAARGL PD APLDLSALRAL D A D VRLSADSL K l G G L PL ------ GDL AA - HLTLDDGR LD L D PLSAGLY G -- G T L S 403
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 569007628 4356 G pkfkmp D L H L K A PK ismpevdlnl KG P K V KGDV --- D V S L PKVEG DL K G PE v DIK G p KVDISA p D VDVH G PDWH 4427
Cdd:COG2982 404 G ------ S L T L D A RG ---------- DP P R V ALKL sls G V D L GPLLP DL A G FD - RLS G - TLNGDL - D LSGT G NSVA 459
PDZ2-PDZRN4-like
cd06716 PDZ domain 2 of PDZ domain-containing RING finger protein 4 (PDZRN4), PDZRN3-B, and related ...
23-57
4.58e-04
PDZ domain 2 of PDZ domain-containing RING finger protein 4 (PDZRN4), PDZRN3-B, and related domains; PDZ (PSD-95 (Postsynaptic density protein 95), Dlg (Discs large protein), and ZO-1 (Zonula occludens-1)) domain 1 of PDZRN4, PDZRN3-B, and related domains. PDZRN4 (also known as ligand of numb protein X 4, and SEMACAP3-like protein) contains an N-terminal RING domain and two tandem repeat PDZ domains. It is involved in the progression of cancer, including human liver cancer and breast cancer, and may contribute to the tumorigenesis of rectal adenocarcinoma. Danio rerio PDZRN3-B may participate in neurogenesis: the first PDZ domain of Danio rerio Pdzrn3 interacts with Kidins220 (Kinase D-interacting substrate 220 kD, also named Ankyrin Repeat-Rich Membrane Spanning), a crucial mediator of signal transduction in neural tissues. PDZ domains usually bind in a sequence-specific manner to short peptide sequences located at the C-terminal end of their partner proteins (known as PDZ binding motifs). The PDZ superfamily includes canonical PDZ domains as well as those with circular permutations and domain swapping mediated by beta-strands. This PDZRN4-like family PDZ2 domain is a canonical PDZ domain containing six beta-strands A-F and two alpha-helices (alpha-helix 1 and 2), arranged in the order: beta-strands A, B, C, alpha-helix 1, beta-strands D, E, alpha-helix 2 and beta-strand F.
Pssm-ID: 467200 [Multi-domain]
Cd Length: 88
Bit Score: 42.26
E-value: 4.58e-04
10 20 30 40
....*....|....*....|....*....|....*....|
gi 569007628 23 GLT IAQ R D D ----- G VF V Q EV MQ NS P AA RT G VVK EGDQI V 57
Cdd:cd06716 18 GLT LCY R T D deedt G IY V S EV DP NS I AA KD G RIR EGDQI L 57
TamB
COG2911 Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, ...
2896-3384
7.05e-04
Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442155 [Multi-domain]
Cd Length: 766
Bit Score: 46.19
E-value: 7.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 2896 PEV D VNLPKAD L DV SG P -------- KV D I D V PD VN -------- IE G p DAKLK G pkfk MPEVNIK A - PKISMPD L N L NL KG 2958
Cdd:COG2911 89 DDL D LRSGGNR L TL SG N lsaasldg DL D L D A PD LA dlaallpg LA G - SLSGD G ---- LDSLSLD A d GTLAQHR L D L DA KG 163
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 2959 PNVKGDVDV S ---------- IPNIE g D L KGPSLDIKS P - K L DVNAPDIDV ------ H G PEGK L K G PKLKMP D MHVSMPKI 3021
Cdd:COG2911 164 EPASLSLAL S ggldrddggt LSRLD - F L NTGRWGLAA P a T L SYDDGRVTL gplcla G G GSLC L S G TLGGTL D LQLRLKNL 242
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 3022 SMPEI ------ DL N L K G s KVK GD V D I SG ---- P KLEGDIKVP --- RVDLKGPEVDISAPKVNIDGKAKKS R FK L pkfnfs 3088
Cdd:COG2911 243 PLALL npflpd DL G L S G - TLN GD A D L SG glan P QGDASLSLS gdl TLNDGLGGLPLGLGDLTLNARLANG R LT L ------ 315
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 3089 GSKVQTPEVDV klkk PDVDITA P KV D INA P EVEVQ G KVKGSKFKMPF L S isspk VSM P D V ELN L K G p KVK GDL DAA G --- 3165
Cdd:COG2911 316 DLTLDGGGLGT ---- LSLSGSV P LA D GLP P SAPLD G NLRLDNLDLAL L N ----- PLL P G V LER L S G - QLN GDL RLS G tla 385
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 3166 - P N L E G DFKGPKVDI K A P D -- V Q L NAPDVDVH gpewnlkmpkmkmpkfg VS G IKAEGPDVAV D LPK G DINIE G p SMNIE G 3242
Cdd:COG2911 386 a P Q L N G QLTLDDGRL K L P A lg V R L TDINLRLR ----------------- FD G DRLTLDGLTA D SGG G TLTLS G - TVDLD G 447
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 3243 PELNVE cpe GS LKG PKFK --- M P EMNIKA pkismp DI DL N L K G PK vkgdvdv SL P KVE G EIK VP EVD I KG P KVDI dvpdv 3319
Cdd:COG2911 448 LSWPAD --- LT LKG DNLR vln P P DYTATV ------ SG DL T L T G TP ------- DG P TLS G NVT VP RAR I TL P ELPP ----- 506
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 569007628 3320 dvhgpdwhlkmpkvkmpkf S MPGFKGEGPE V DVSLPKANIDVSGP --- KV D ID V --- P DV NIE G P -- DA K L K G 3384
Cdd:COG2911 507 ------------------- S AVSLSDDVVV V NRPPEPVPEEEAAG lpl DL D LN V nlg D DV RVR G F gl DA R L G G 560
Herpes_BLLF1
pfam05109 Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ...
4591-4783
9.61e-04
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain]
Cd Length: 886
Bit Score: 46.06
E-value: 9.61e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 4591 G P KVDIDV P DV N VE G --- P DMKVKG P KFRMPEI N IK AP KIS mpdvdlelk GP K V KG A f D GSV P KIE GT LK G PEIDMKG P G 4667
Cdd:pfam05109 424 A P ESTTTS P TL N TT G faa P NTTTGL P SSTHVPT N LT AP AST --------- GP T V ST A - D VTS P TPA GT TS G ASPVTPS P S 493
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 4668 LDFE G PDA K ls G P NLKM P SLE V SV P KITGPDANVHLK TP KVGISA P K LG G gevdl KG P KVDLE TP SLDVHMES P DINIEG 4747
Cdd:pfam05109 494 PRDN G TES K -- A P DMTS P TSA V TT P TPNATSPTPAVT TP TPNATS P T LG K ----- TS P TSAVT TP TPNATSPT P AVTTPT 566
170 180 190
....*....|....*....|....*....|....*.
gi 569007628 4748 P DVKV P KFK K PKFGFGAKS P KADIKT PTV DV T V P E A 4783
Cdd:pfam05109 567 P NATI P TLG K TSPTSAVTT P TPNATS PTV GE T S P Q A 602
AsmA
COG2982 Uncharacterized conserved protein AsmA involved in outer membrane biogenesis [Cell wall ...
1025-1468
2.29e-03
Uncharacterized conserved protein AsmA involved in outer membrane biogenesis [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442221 [Multi-domain]
Cd Length: 491
Bit Score: 44.26
E-value: 2.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 1025 D VDI S V - P KLDISAP D LN L EG P E G KLKG P KFKMPEM hfkapkvslp DV DL D L kgpkmkgnldms A P KIE GE MKAPDVDIK 1103
Cdd:COG2982 55 D LSL S L f P WPGVTLG D VT L SN P D G FGGP P LASAERL ---------- EL DL A L ------------ L P LLS GE LEVDEITLD 112
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 1104 GP NVDI kap E V D VQ G - PE W SLKMPKMKMPK fsmptl KG E GPDVDVSLPKAT I D --------- V SG PK L DIETSDVS L E GP 1173
Cdd:COG2982 113 GP VINL --- E R D AD G r AN W DFLLAAAAAAA ------ DA E ASAWSLDIGRLE I T dgrlvydda A SG AD L TLDDLNLT L S GP 183
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 1174 E gklkgpkfkm P D MH F KA pkismp DVDLNMK G PKVKG D MDVTVPKIE G EMKV - P D VDIKGPKVDISA p D VD VQ G P D WH L K 1252
Cdd:COG2982 184 S ---------- L D GP F RL ------ SGSGRLN G QPLTL D GKIGGLLAL G PYPL k L D LRSGDLRLSLDG - T VD LA G L D GQ L A 246
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 1253 MPKMKMPKF s MPGFKAEG PE VSLPKADLDVSGPKVDIDVP D VNIEGP D AK L K G --------- P KF kmp EMNIKAPKISMP 1323
Cdd:COG2982 247 LSGPSLRDL - LALLGVTL PE PGPFSLSGRLTADGDRLRLE D LKGTLG D SD L T G dlsvtggdr P AL --- TGDLASDRLDLD 322
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 1324 DL hlk G P KVKGDVDVSL P KVEGD L KGPDI D IKG pkmd IN A P D M DV Q gpdwh L KMPKM K MPKFSM pgfkaegpevdv NLPK 1403
Cdd:COG2982 323 DL --- L P AAPAAAAAGA P AAARG L PDAPL D LSA ---- LR A L D A DV R ----- L SADSL K LGGLPL ------------ GDLA 378
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 569007628 1404 A DIDVSGPKV D IE ap DV S IEGPE G K L K G P --- KFKMPDMHFKA p K I S MPD VDL ----- NIK G PK --- G KADV D AS L 1468
Cdd:COG2982 379 A HLTLDDGRL D LD -- PL S AGLYG G T L S G S ltl DARGDPPRVAL - K L S LSG VDL gpllp DLA G FD rls G TLNG D LD L 451
DUF4097
pfam13349 Putative adhesin; This has a putative all-beta structure with a twenty-residue repeat with a ...
2912-3109
8.11e-03
Putative adhesin; This has a putative all-beta structure with a twenty-residue repeat with a highly conserved repeating GD, gly-asp, motif. It may form part of a bacterial adhesin.
Pssm-ID: 433135 [Multi-domain]
Cd Length: 246
Bit Score: 41.54
E-value: 8.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 2912 PK VDI D VPD V NIEGP D AKLKGP kfkmpe VNI K APKI S MPDLNLN LK gp NV KGD v DVS I PNIE GD LKGPSLDI K SP KL DVN 2991
Cdd:pfam13349 73 PK DYL D DLT V KTSSG D ISVSDN ------ LAL K DVIL S SNSGDIT LK -- NV SAE - NLT I KSTS GD VSIDGSSA K KS KL ITT 143
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 2992 AP DID VHG pe GKL K GPK LK MPDMHVSM pki S MPE I DLN LK GSKVK GD V D I S G P K l EGDIK vpr VD LKGPEV D ISA P KVNI 3071
Cdd:pfam13349 144 SG DID LNN -- VSG K DLD LK STSGDINV --- S NTT I AGS LK ITATS GD I D L S L P D - SASFG --- VD ASSTSG D VTI P YKFD 214
170 180 190
....*....|....*....|....*....|....*...
gi 569007628 3072 DGKAKKS R FK lp KF N FS G SKV qtpe VD VKLKKP D VDIT 3109
Cdd:pfam13349 215 EEGTEEN R IY -- GT N GN G KHK ---- VD ISTSSG D ITVR 246
Name
Accession
Description
Interval
E-value
TamB
COG2911 Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, ...
4928-5431
4.20e-10
Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442155 [Multi-domain]
Cd Length: 766
Bit Score: 66.60
E-value: 4.20e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 4928 VE A SGPKIE G N L KGPKVQANLDTP D INIEG - PEAKIKAPSFSVSA ----- PQVSIP D VNVNLKG -------- P KIK G DVP 4993
Cdd:COG2911 58 LD A PEGALS G L L DLVQATLDAEGL D LASSA l DDLDLRSGGNRLTL sgnls AASLDG D LDLDAPD ladlaall P GLA G SLS 137
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 4994 SV GL EGPNI D LQ G PEGKIKF pkfslp KIS A P G VKMEGGSTEI G AQMPSLE G G LS TS D m K L EGPHLS L KG P G vdlp SVDLS 5073
Cdd:COG2911 138 GD GL DSLSL D AD G TLAQHRL ------ DLD A K G EPASLSLALS G GLDRDDG G T LS RL D - F L NTGRWG L AA P A ---- TLSYD 206
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 5074 MPK V SGPD L DMNLK G P - S L K G D LG AS s PSMK L HAPG L D L KGVG gkv HIGA D GVKM SG - IDATTA LS V G APDVTLKG - P SL 5150
Cdd:COG2911 207 DGR V TLGP L CLAGG G S l C L S G T LG GT - LDLQ L RLKN L P L ALLN --- PFLP D DLGL SG t LNGDAD LS G G LANPQGDA s L SL 282
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 5151 Q GDL AVSGDIKCPKVSVATPDVSLEASE G AVK L phmklp QFGISTP G SD - L DINIKG P QVC G ELKGSGM D V NL KGPQISA 5229
Cdd:COG2911 283 S GDL TLNDGLGGLPLGLGDLTLNARLAN G RLT L ------ DLTLDGG G LG t L SLSGSV P LAD G LPPSAPL D G NL RLDNLDL 356
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 5230 ------- P SMDFN L E G p KVK G S L GAA G E L KG P AIG G -- A L PGISIQG P EGNLQMPG I KA sgc DVKLSSGQISGPEIKG D L 5300
Cdd:COG2911 357 allnpll P GVLER L S G - QLN G D L RLS G T L AA P QLN G ql T L DDGRLKL P ALGVRLTD I NL --- RLRFDGDRLTLDGLTA D S 432
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 5301 K G SG L G L H G A V P -------- D IGV KG PSFN V --------- A S PESDFGVSLK GP KVK G G V D V SGG - VSV P DINLGEGHM S 5362
Cdd:COG2911 433 G G GT L T L S G T V D ldglswpa D LTL KG DNLR V lnppdytat V S GDLTLTGTPD GP TLS G N V T V PRA r ITL P ELPPSAVSL S 512
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 5363 ---- V KGSGV E WKGPQVSSS L N LD TS --- K L AGNLHFS G P ---- KIE GD VKGGQ T GLQG P G L S vsgpq G HLESES G KVTF 5431
Cdd:COG2911 513 ddvv V VNRPP E PVPEEEAAG L P LD LD lnv N L GDDVRVR G F glda RLG GD LRLTG T PGGA P R L T ----- G EINLVR G RYNA 587
AsmA
COG2982 Uncharacterized conserved protein AsmA involved in outer membrane biogenesis [Cell wall ...
3994-4427
1.60e-06
Uncharacterized conserved protein AsmA involved in outer membrane biogenesis [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442221 [Multi-domain]
Cd Length: 491
Bit Score: 54.66
E-value: 1.60e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 3994 DL DV S - G P KVDIEGPN V NIEG P E G klkgpk F KM P D L h LK A PKI smp E I DL N L k G P K L K G DVD V slpkvegdlkg P E VDIK 4072
Cdd:COG2982 55 DL SL S l F P WPGVTLGD V TLSN P D G ------ F GG P P L - AS A ERL --- E L DL A L - L P L L S G ELE V ----------- D E ITLD 112
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 4073 GP KVDISA pdm D VH G - PD W HLKMPKMKMPK fsmpgf K AE GPEVDVNLPKAD I D --------- V SG PKVDI D VPDVNIE GP 4142
Cdd:COG2982 113 GP VINLER --- D AD G r AN W DFLLAAAAAAA ------ D AE ASAWSLDIGRLE I T dgrlvydda A SG ADLTL D DLNLTLS GP 183
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 4143 D ---------- AK L K G PKFKM p EMN I KAPKISM P - DFD L H L KGPKVKGDV D -- AS L PKME G E L KGP G IDIK -- CPTVDID 4207
Cdd:COG2982 184 S ldgpfrlsgs GR L N G QPLTL - DGK I GGLLALG P y PLK L D L RSGDLRLSL D gt VD L AGLD G Q L ALS G PSLR dl LALLGVT 262
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 4208 T P dvni E VPEGK L K G pkfkmp DMHIKAPKISMP D FDLN L KGPKVK GD VDLAL --- P NVE GDL KGPEI D I -------- EGP 4276
Cdd:COG2982 263 L P ---- E PGPFS L S G ------ RLTADGDRLRLE D LKGT L GDSDLT GD LSVTG gdr P ALT GDL ASDRL D L ddllpaap AAA 332
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 4277 EGKLKGPKFKV PD VQFKTPQISMS D I D LNVKGPKI K - G D L DI sipkpe GDL KG p KVDIKGPK LD I D TPDIDIH G pe G K L K 4355
Cdd:COG2982 333 AAGAPAAARGL PD APLDLSALRAL D A D VRLSADSL K l G G L PL ------ GDL AA - HLTLDDGR LD L D PLSAGLY G -- G T L S 403
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 569007628 4356 G pkfkmp D L H L K A PK ismpevdlnl KG P K V KGDV --- D V S L PKVEG DL K G PE v DIK G p KVDISA p D VDVH G PDWH 4427
Cdd:COG2982 404 G ------ S L T L D A RG ---------- DP P R V ALKL sls G V D L GPLLP DL A G FD - RLS G - TLNGDL - D LSGT G NSVA 459
TamB
COG2911 Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, ...
5041-5296
1.72e-06
Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442155 [Multi-domain]
Cd Length: 766
Bit Score: 54.66
E-value: 1.72e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 5041 SL E G GLSTS D MKLEGPH L SLK gpg VD L PSV DL SM --------- PKV SG P - DL D MN L K G ---- P S L K G D L GASSPSM KL H A 5106
Cdd:COG2911 328 SL S G SVPLA D GLPPSAP L DGN --- LR L DNL DL AL lnpllpgvl ERL SG Q l NG D LR L S G tlaa P Q L N G Q L TLDDGRL KL P A 404
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 5107 P G LD L KGVGGKVHIGA D GVKMS G ID A TTA --- L SVGA p D V T L K G P S LQG DL AVS GD ikcp KVS V --------- ATP D VS L 5174
Cdd:COG2911 405 L G VR L TDINLRLRFDG D RLTLD G LT A DSG ggt L TLSG - T V D L D G L S WPA DL TLK GD ---- NLR V lnppdytat VSG D LT L 479
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 5175 EAS ------ E G A V KL P -- HMK LP QFGI S TPGSDL D INIKG -- P QVCG E LKGS G MDVN L KG p QISAPS m D FNLE G PKVKGS 5244
Cdd:COG2911 480 TGT pdgptl S G N V TV P ra RIT LP ELPP S AVSLSD D VVVVN rp P EPVP E EEAA G LPLD L DL - NVNLGD - D VRVR G FGLDAR 557
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 569007628 5245 LG AAGE L K G PA i GGA L pgisiq GPE G NLQMPG -- IK A S G CDVKLSS G Q I -- S GP EI 5296
Cdd:COG2911 558 LG GDLR L T G TP - GGA P ------ RLT G EINLVR gr YN A Y G QRLTIER G S I tf N GP PL 606
AsmA
COG2982 Uncharacterized conserved protein AsmA involved in outer membrane biogenesis [Cell wall ...
4934-5304
9.03e-05
Uncharacterized conserved protein AsmA involved in outer membrane biogenesis [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442221 [Multi-domain]
Cd Length: 491
Bit Score: 48.88
E-value: 9.03e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 4934 K I E G N L K --- G P KVQAN L D tp D INIEG P EAKIKA P S fs V SA PQVSI p D VNV nlk G P KIK G D -- V PSVG L E GP N I D L Q --- 5005
Cdd:COG2982 51 T I D G D L S lsl F P WPGVT L G -- D VTLSN P DGFGGP P L -- A SA ERLEL - D LAL --- L P LLS G E le V DEIT L D GP V I N L E rda 122
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 5006 ---------- GPEGKIKFPKF S LPKISAPGVKMEG G S -------------- TEIGAQM -- PSL E G GLS - TSDMK L E G PH L 5058
Cdd:COG2982 123 dgranwdfll AAAAAAADAEA S AWSLDIGRLEITD G R lvyddaasgadltl DDLNLTL sg PSL D G PFR l SGSGR L N G QP L 202
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 5059 S L K G P - G VD L PSVDLSM - PKVSGP DL DMN L K G ---- PS L K G D L GA S S PS MK -- L HAP G LD L KGV G ----- G KVHIGA D GV 5125
Cdd:COG2982 203 T L D G K i G GL L ALGPYPL k LDLRSG DL RLS L D G tvdl AG L D G Q L AL S G PS LR dl L ALL G VT L PEP G pfsls G RLTADG D RL 282
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 5126 KMSGI datt ALSV G ap D VT L K G --------- P S L Q GDLA v S GDIKCPKVSV A T P - DVSLE A SEG A VK LP HMK L PQFGIS t 5195
Cdd:COG2982 283 RLEDL ---- KGTL G -- D SD L T G dlsvtggdr P A L T GDLA - S DRLDLDDLLP A A P a AAAAG A PAA A RG LP DAP L DLSALR - 354
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 5196 p GS D L D INIKG pqvc GE LK GS G M ------- DVN L KGPQISAPSMDFN L E G PKVK GSL ----------- GAAGE L K G PAI G 5257
Cdd:COG2982 355 - AL D A D VRLSA ---- DS LK LG G L plgdlaa HLT L DDGRLDLDPLSAG L Y G GTLS GSL tldargdpprv ALKLS L S G VDL G 429
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 569007628 5258 GA LP GISIQGP - E G N L QM pgikasgc D VK LS SGQI S GPEIKGD L K GS G 5304
Cdd:COG2982 430 PL LP DLAGFDR l S G T L NG -------- D LD LS GTGN S VAALLAS L N GS A 469
PDZ2-PDZRN4-like
cd06716 PDZ domain 2 of PDZ domain-containing RING finger protein 4 (PDZRN4), PDZRN3-B, and related ...
23-57
4.58e-04
PDZ domain 2 of PDZ domain-containing RING finger protein 4 (PDZRN4), PDZRN3-B, and related domains; PDZ (PSD-95 (Postsynaptic density protein 95), Dlg (Discs large protein), and ZO-1 (Zonula occludens-1)) domain 1 of PDZRN4, PDZRN3-B, and related domains. PDZRN4 (also known as ligand of numb protein X 4, and SEMACAP3-like protein) contains an N-terminal RING domain and two tandem repeat PDZ domains. It is involved in the progression of cancer, including human liver cancer and breast cancer, and may contribute to the tumorigenesis of rectal adenocarcinoma. Danio rerio PDZRN3-B may participate in neurogenesis: the first PDZ domain of Danio rerio Pdzrn3 interacts with Kidins220 (Kinase D-interacting substrate 220 kD, also named Ankyrin Repeat-Rich Membrane Spanning), a crucial mediator of signal transduction in neural tissues. PDZ domains usually bind in a sequence-specific manner to short peptide sequences located at the C-terminal end of their partner proteins (known as PDZ binding motifs). The PDZ superfamily includes canonical PDZ domains as well as those with circular permutations and domain swapping mediated by beta-strands. This PDZRN4-like family PDZ2 domain is a canonical PDZ domain containing six beta-strands A-F and two alpha-helices (alpha-helix 1 and 2), arranged in the order: beta-strands A, B, C, alpha-helix 1, beta-strands D, E, alpha-helix 2 and beta-strand F.
Pssm-ID: 467200 [Multi-domain]
Cd Length: 88
Bit Score: 42.26
E-value: 4.58e-04
10 20 30 40
....*....|....*....|....*....|....*....|
gi 569007628 23 GLT IAQ R D D ----- G VF V Q EV MQ NS P AA RT G VVK EGDQI V 57
Cdd:cd06716 18 GLT LCY R T D deedt G IY V S EV DP NS I AA KD G RIR EGDQI L 57
TamB
COG2911 Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, ...
2896-3384
7.05e-04
Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442155 [Multi-domain]
Cd Length: 766
Bit Score: 46.19
E-value: 7.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 2896 PEV D VNLPKAD L DV SG P -------- KV D I D V PD VN -------- IE G p DAKLK G pkfk MPEVNIK A - PKISMPD L N L NL KG 2958
Cdd:COG2911 89 DDL D LRSGGNR L TL SG N lsaasldg DL D L D A PD LA dlaallpg LA G - SLSGD G ---- LDSLSLD A d GTLAQHR L D L DA KG 163
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 2959 PNVKGDVDV S ---------- IPNIE g D L KGPSLDIKS P - K L DVNAPDIDV ------ H G PEGK L K G PKLKMP D MHVSMPKI 3021
Cdd:COG2911 164 EPASLSLAL S ggldrddggt LSRLD - F L NTGRWGLAA P a T L SYDDGRVTL gplcla G G GSLC L S G TLGGTL D LQLRLKNL 242
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 3022 SMPEI ------ DL N L K G s KVK GD V D I SG ---- P KLEGDIKVP --- RVDLKGPEVDISAPKVNIDGKAKKS R FK L pkfnfs 3088
Cdd:COG2911 243 PLALL npflpd DL G L S G - TLN GD A D L SG glan P QGDASLSLS gdl TLNDGLGGLPLGLGDLTLNARLANG R LT L ------ 315
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 3089 GSKVQTPEVDV klkk PDVDITA P KV D INA P EVEVQ G KVKGSKFKMPF L S isspk VSM P D V ELN L K G p KVK GDL DAA G --- 3165
Cdd:COG2911 316 DLTLDGGGLGT ---- LSLSGSV P LA D GLP P SAPLD G NLRLDNLDLAL L N ----- PLL P G V LER L S G - QLN GDL RLS G tla 385
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 3166 - P N L E G DFKGPKVDI K A P D -- V Q L NAPDVDVH gpewnlkmpkmkmpkfg VS G IKAEGPDVAV D LPK G DINIE G p SMNIE G 3242
Cdd:COG2911 386 a P Q L N G QLTLDDGRL K L P A lg V R L TDINLRLR ----------------- FD G DRLTLDGLTA D SGG G TLTLS G - TVDLD G 447
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 3243 PELNVE cpe GS LKG PKFK --- M P EMNIKA pkismp DI DL N L K G PK vkgdvdv SL P KVE G EIK VP EVD I KG P KVDI dvpdv 3319
Cdd:COG2911 448 LSWPAD --- LT LKG DNLR vln P P DYTATV ------ SG DL T L T G TP ------- DG P TLS G NVT VP RAR I TL P ELPP ----- 506
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 569007628 3320 dvhgpdwhlkmpkvkmpkf S MPGFKGEGPE V DVSLPKANIDVSGP --- KV D ID V --- P DV NIE G P -- DA K L K G 3384
Cdd:COG2911 507 ------------------- S AVSLSDDVVV V NRPPEPVPEEEAAG lpl DL D LN V nlg D DV RVR G F gl DA R L G G 560
Herpes_BLLF1
pfam05109 Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ...
4591-4783
9.61e-04
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain]
Cd Length: 886
Bit Score: 46.06
E-value: 9.61e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 4591 G P KVDIDV P DV N VE G --- P DMKVKG P KFRMPEI N IK AP KIS mpdvdlelk GP K V KG A f D GSV P KIE GT LK G PEIDMKG P G 4667
Cdd:pfam05109 424 A P ESTTTS P TL N TT G faa P NTTTGL P SSTHVPT N LT AP AST --------- GP T V ST A - D VTS P TPA GT TS G ASPVTPS P S 493
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 4668 LDFE G PDA K ls G P NLKM P SLE V SV P KITGPDANVHLK TP KVGISA P K LG G gevdl KG P KVDLE TP SLDVHMES P DINIEG 4747
Cdd:pfam05109 494 PRDN G TES K -- A P DMTS P TSA V TT P TPNATSPTPAVT TP TPNATS P T LG K ----- TS P TSAVT TP TPNATSPT P AVTTPT 566
170 180 190
....*....|....*....|....*....|....*.
gi 569007628 4748 P DVKV P KFK K PKFGFGAKS P KADIKT PTV DV T V P E A 4783
Cdd:pfam05109 567 P NATI P TLG K TSPTSAVTT P TPNATS PTV GE T S P Q A 602
PDZ_canonical
cd00136 canonical PDZ domain; Canonical PDZ (PSD-95 (Postsynaptic density protein 95), Dlg (Discs ...
23-57
1.65e-03
canonical PDZ domain; Canonical PDZ (PSD-95 (Postsynaptic density protein 95), Dlg (Discs large protein), and ZO-1 (Zonula occludens-1)) domain. PDZ domains usually bind to short specific peptide sequences located at the C-terminal end of their partner proteins known as PDZ binding motifs. These domains can also interact with internal peptide motifs and certain lipids, and can take part in a head-to-tail oligomerization with other PDZ domains. The PDZ superfamily includes canonical PDZ domains as well as those with circular permutations and domain swapping mediated by beta-strands. The canonical PDZ domain contains six beta-strands A-F and two alpha-helices (alpha-helix 1 and 2), arranged in the order: beta-strands A, B, C, alpha-helix 1, beta-strands D, E, alpha-helix 2 and beta-strand F.
Pssm-ID: 467153 [Multi-domain]
Cd Length: 81
Bit Score: 40.60
E-value: 1.65e-03
10 20 30
....*....|....*....|....*....|....*...
gi 569007628 23 G LT I A --- QRDD G V FV QE V MQNS PAAR T G VVKE GD Q I V 57
Cdd:cd00136 13 G FS I R ggk DGGG G I FV SR V EPGG PAAR D G RLRV GD R I L 50
AsmA
COG2982 Uncharacterized conserved protein AsmA involved in outer membrane biogenesis [Cell wall ...
1025-1468
2.29e-03
Uncharacterized conserved protein AsmA involved in outer membrane biogenesis [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442221 [Multi-domain]
Cd Length: 491
Bit Score: 44.26
E-value: 2.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 1025 D VDI S V - P KLDISAP D LN L EG P E G KLKG P KFKMPEM hfkapkvslp DV DL D L kgpkmkgnldms A P KIE GE MKAPDVDIK 1103
Cdd:COG2982 55 D LSL S L f P WPGVTLG D VT L SN P D G FGGP P LASAERL ---------- EL DL A L ------------ L P LLS GE LEVDEITLD 112
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 1104 GP NVDI kap E V D VQ G - PE W SLKMPKMKMPK fsmptl KG E GPDVDVSLPKAT I D --------- V SG PK L DIETSDVS L E GP 1173
Cdd:COG2982 113 GP VINL --- E R D AD G r AN W DFLLAAAAAAA ------ DA E ASAWSLDIGRLE I T dgrlvydda A SG AD L TLDDLNLT L S GP 183
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 1174 E gklkgpkfkm P D MH F KA pkismp DVDLNMK G PKVKG D MDVTVPKIE G EMKV - P D VDIKGPKVDISA p D VD VQ G P D WH L K 1252
Cdd:COG2982 184 S ---------- L D GP F RL ------ SGSGRLN G QPLTL D GKIGGLLAL G PYPL k L D LRSGDLRLSLDG - T VD LA G L D GQ L A 246
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 1253 MPKMKMPKF s MPGFKAEG PE VSLPKADLDVSGPKVDIDVP D VNIEGP D AK L K G --------- P KF kmp EMNIKAPKISMP 1323
Cdd:COG2982 247 LSGPSLRDL - LALLGVTL PE PGPFSLSGRLTADGDRLRLE D LKGTLG D SD L T G dlsvtggdr P AL --- TGDLASDRLDLD 322
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 1324 DL hlk G P KVKGDVDVSL P KVEGD L KGPDI D IKG pkmd IN A P D M DV Q gpdwh L KMPKM K MPKFSM pgfkaegpevdv NLPK 1403
Cdd:COG2982 323 DL --- L P AAPAAAAAGA P AAARG L PDAPL D LSA ---- LR A L D A DV R ----- L SADSL K LGGLPL ------------ GDLA 378
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 569007628 1404 A DIDVSGPKV D IE ap DV S IEGPE G K L K G P --- KFKMPDMHFKA p K I S MPD VDL ----- NIK G PK --- G KADV D AS L 1468
Cdd:COG2982 379 A HLTLDDGRL D LD -- PL S AGLYG G T L S G S ltl DARGDPPRVAL - K L S LSG VDL gpllp DLA G FD rls G TLNG D LD L 451
AsmA
COG2982 Uncharacterized conserved protein AsmA involved in outer membrane biogenesis [Cell wall ...
2972-3308
2.32e-03
Uncharacterized conserved protein AsmA involved in outer membrane biogenesis [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442221 [Multi-domain]
Cd Length: 491
Bit Score: 44.26
E-value: 2.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 2972 I E GDL kgp SL DI k S P KLD V NAP D IDVHG P E G KLKG P KLKMPDM hvsmpkismp E I DL N L kgskvkgdvdis G P K L E G DIK 3051
Cdd:COG2982 52 I D GDL --- SL SL - F P WPG V TLG D VTLSN P D G FGGP P LASAERL ---------- E L DL A L ------------ L P L L S G ELE 105
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 3052 V PRVD L K GP EVDI -------------- S A PKVNI D GK A KKSRFKLPKFNFSGSKV -- QTPEVDVK L KKP D VDI T APKVDI 3115
Cdd:COG2982 106 V DEIT L D GP VINL erdadgranwdfll A A AAAAA D AE A SAWSLDIGRLEITDGRL vy DDAASGAD L TLD D LNL T LSGPSL 185
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 3116 NA P - EVEVQ G KVK G SKFKM ----- PF L SISS ---- PKVSMP D VE L N L K G ---- PKVK G D L DAA GP N L ------------- 3168
Cdd:COG2982 186 DG P f RLSGS G RLN G QPLTL dgkig GL L ALGP yplk LDLRSG D LR L S L D G tvdl AGLD G Q L ALS GP S L rdllallgvtlpe 265
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 3169 ------ E G DFKGPKVDIKAP D VQLNAP D V D VH G --------- P EW -- N L KMPKMKMPKFG --- VSGIK A EG P DV A VD LP K 3228
Cdd:COG2982 266 pgpfsl S G RLTADGDRLRLE D LKGTLG D S D LT G dlsvtggdr P AL tg D L ASDRLDLDDLL paa PAAAA A GA P AA A RG LP D 345
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 3229 GDINIEG - PSMNI egpelnvecp EGS L KGPKF K MPEMNI --------- KAPKISMPDIDLN L K G PKVK G ---- D VDVSL P 3294
Cdd:COG2982 346 APLDLSA l RALDA ---------- DVR L SADSL K LGGLPL gdlaahltl DDGRLDLDPLSAG L Y G GTLS G sltl D ARGDP P 415
410
....*....|....
gi 569007628 3295 K V EGEIKVPE VD IK 3308
Cdd:COG2982 416 R V ALKLSLSG VD LG 429
DUF4097
pfam13349 Putative adhesin; This has a putative all-beta structure with a twenty-residue repeat with a ...
2912-3109
8.11e-03
Putative adhesin; This has a putative all-beta structure with a twenty-residue repeat with a highly conserved repeating GD, gly-asp, motif. It may form part of a bacterial adhesin.
Pssm-ID: 433135 [Multi-domain]
Cd Length: 246
Bit Score: 41.54
E-value: 8.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 2912 PK VDI D VPD V NIEGP D AKLKGP kfkmpe VNI K APKI S MPDLNLN LK gp NV KGD v DVS I PNIE GD LKGPSLDI K SP KL DVN 2991
Cdd:pfam13349 73 PK DYL D DLT V KTSSG D ISVSDN ------ LAL K DVIL S SNSGDIT LK -- NV SAE - NLT I KSTS GD VSIDGSSA K KS KL ITT 143
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569007628 2992 AP DID VHG pe GKL K GPK LK MPDMHVSM pki S MPE I DLN LK GSKVK GD V D I S G P K l EGDIK vpr VD LKGPEV D ISA P KVNI 3071
Cdd:pfam13349 144 SG DID LNN -- VSG K DLD LK STSGDINV --- S NTT I AGS LK ITATS GD I D L S L P D - SASFG --- VD ASSTSG D VTI P YKFD 214
170 180 190
....*....|....*....|....*....|....*...
gi 569007628 3072 DGKAKKS R FK lp KF N FS G SKV qtpe VD VKLKKP D VDIT 3109
Cdd:pfam13349 215 EEGTEEN R IY -- GT N GN G KHK ---- VD ISTSSG D ITVR 246
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
