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Conserved domains on  [gi|568982489|ref|XP_006516982|]
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lysine-specific histone demethylase 1B isoform X6 [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PLN02328 super family cl33466
lysine-specific histone demethylase 1 homolog
 5-415 1.91e-88

lysine-specific histone demethylase 1 homolog


The actual alignment was detected with superfamily member PLN02328:

Pssm-ID: 215187 [Multi-domain]  Cd Length: 808  Bit Score: 284.96  E-value: 1.91e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489   5 VTVLEAKDRIGGRVwddKSFK----GVVVGR--GPQIVNGCINNPVALMCEQLGISMRKLGERCDLIQEGGRITDPTVDK 78
Cdd:PLN02328 264 VVVLEGRARPGGRV---KTMKmkgdGVVAAAdlGGSVLTGINGNPLGVLARQLGLPLHKVRDICPLYLPDGKAVDAEIDS 340

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489  79 RMDFHFNALLDVVSEWRK---DKTLLQDVPLGEKIEeiyrAFVKESGIQFSELEGQVLQFHLSNLEYACGSSLHQVSARS 155
Cdd:PLN02328 341 KIEASFNKLLDRVCKLRQamiEEVKSVDVNLGTALE----AFRHVYKVAEDPQERMLLNWHLANLEYANASLMSNLSMAY 416

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489 156 WDHNEFFaQFAGDHTLLTPGYSTIIEKLAEGLDIRLKSPVQSIDYTGDEVQVTTTdGMGHSAQKVLVTVPLAILQRGAIQ 235
Cdd:PLN02328 417 WDQDDPY-EMGGDHCFIPGGNDTFVRELAKDLPIFYERTVESIRYGVDGVIVYAG-GQEFHGDMVLCTVPLGVLKKGSIE 494

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489 236 FNPPLSEKKMKAINSLGAGIIEKIALQFPYRFWDSKVqgaDFFGHVPPSASQRGLFAVFYDMDS-QQQSVLMSVITGEAV 314
Cdd:PLN02328 495 FYPELPQRKKDAIQRLGYGLLNKVALLFPYNFWGGEI---DTFGHLTEDPSMRGEFFLFYSYSSvSGGPLLIALVAGDAA 571

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489 315 ASLRTMDDKQVLQQCMGILRELFKEQEI--PEPTKYFVTRWSTEPWIQMAYSFVKTFGSGEAYDIIAEEI-QGTVFFAGE 391
Cdd:PLN02328 572 VKFETLSPVESVKRVLQILRGIFHPKGIvvPDPVQAVCTRWGKDCFTYGSYSYVAVGSSGDDYDILAESVgDGRVFFAGE 651

                        410       420
                 ....*....|....*....|....
gi 568982489 392 ATNRHFPQTVTGAYLSGVREASKI 415
Cdd:PLN02328 652 ATNKQYPATMHGAFLSGMREAANI 675
 
Name Accession Description Interval E-value
PLN02328 PLN02328
lysine-specific histone demethylase 1 homolog
 5-415 1.91e-88

lysine-specific histone demethylase 1 homolog


Pssm-ID: 215187 [Multi-domain]  Cd Length: 808  Bit Score: 284.96  E-value: 1.91e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489   5 VTVLEAKDRIGGRVwddKSFK----GVVVGR--GPQIVNGCINNPVALMCEQLGISMRKLGERCDLIQEGGRITDPTVDK 78
Cdd:PLN02328 264 VVVLEGRARPGGRV---KTMKmkgdGVVAAAdlGGSVLTGINGNPLGVLARQLGLPLHKVRDICPLYLPDGKAVDAEIDS 340

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489  79 RMDFHFNALLDVVSEWRK---DKTLLQDVPLGEKIEeiyrAFVKESGIQFSELEGQVLQFHLSNLEYACGSSLHQVSARS 155
Cdd:PLN02328 341 KIEASFNKLLDRVCKLRQamiEEVKSVDVNLGTALE----AFRHVYKVAEDPQERMLLNWHLANLEYANASLMSNLSMAY 416

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489 156 WDHNEFFaQFAGDHTLLTPGYSTIIEKLAEGLDIRLKSPVQSIDYTGDEVQVTTTdGMGHSAQKVLVTVPLAILQRGAIQ 235
Cdd:PLN02328 417 WDQDDPY-EMGGDHCFIPGGNDTFVRELAKDLPIFYERTVESIRYGVDGVIVYAG-GQEFHGDMVLCTVPLGVLKKGSIE 494

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489 236 FNPPLSEKKMKAINSLGAGIIEKIALQFPYRFWDSKVqgaDFFGHVPPSASQRGLFAVFYDMDS-QQQSVLMSVITGEAV 314
Cdd:PLN02328 495 FYPELPQRKKDAIQRLGYGLLNKVALLFPYNFWGGEI---DTFGHLTEDPSMRGEFFLFYSYSSvSGGPLLIALVAGDAA 571

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489 315 ASLRTMDDKQVLQQCMGILRELFKEQEI--PEPTKYFVTRWSTEPWIQMAYSFVKTFGSGEAYDIIAEEI-QGTVFFAGE 391
Cdd:PLN02328 572 VKFETLSPVESVKRVLQILRGIFHPKGIvvPDPVQAVCTRWGKDCFTYGSYSYVAVGSSGDDYDILAESVgDGRVFFAGE 651

                        410       420
                 ....*....|....*....|....
gi 568982489 392 ATNRHFPQTVTGAYLSGVREASKI 415
Cdd:PLN02328 652 ATNKQYPATMHGAFLSGMREAANI 675
Amino_oxidase pfam01593
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, ...
 3-415 9.64e-74

Flavin containing amine oxidoreductase; This family consists of various amine oxidases, including maze polyamine oxidase (PAO)and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation; these include various neurotransmitters, neurotoxins and trace amines. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium. PAOs in plants, bacteria and protozoa oxidase spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.


Pssm-ID: 396255 [Multi-domain]  Cd Length: 446  Bit Score: 237.39  E-value: 9.64e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489    3 PSVTVLEAKDRIGGRVWDDKsFKGVVVGRGPQIVNGCiNNPVALMCEQLGI----SMRKLGERCDLIQEGGRITDPTVDk 78
Cdd:pfam01593  15 HDVTVLEARDRVGGRIRTVR-DDGFLIELGAMWFHGA-QPPLLALLKELGLedrlVLPDPAPFYTVLFAGGRRYPGDFR- 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489   79 RMDFHFNALLDVVSEW----------------RKDKTLLQDVPLGEKIEEIYR-AFVKESGIQFSELEGQVLQFHLSNLE 141
Cdd:pfam01593  92 RVPAGWEGLLEFGRLLsipeklrlglaalasdALDEFDLDDFSLAESLLFLGRrGPGDVEVWDRLIDPELFAALPFASGA 171

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489  142 YACGSSLHQVSArSWDHNEFFAQFAGDHTLLTPGYSTIIEKLAE---GLDIRLKSPVQSIDYTGDEVQVTTTDGMGHSAQ 218
Cdd:pfam01593 172 FAGDPSELSAGL-ALPLLWALLGEGGSLLLPRGGLGALPDALAAqllGGDVRLNTRVRSIDREGDGVTVTLTDGEVIEAD 250

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489  219 KVLVTVPLAILQRgaIQFNPPLSEKKMKAINSLGAGIIEKIALQFPYRFWDSKvqgaDFFGHVPPSASQRGLFAVFYDMD 298
Cdd:pfam01593 251 AVIVTVPLGVLKR--ILFTPPLPPEKARAIRNLGYGPVNKVHLEFDRKFWPDL----GLLGLLSELLTGLGTAFSWLTFP 324

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489  299 SQ----QQSVLMSVIT-GEAVASLRTMDDKQVLQQCMGILRELFKEqEIPEPTKYFVTRWSTEPWIQMAYSFVKTFGSGE 373
Cdd:pfam01593 325 NRappgKGLLLLVYVGpGDRARELEGLSDEELLQAVLRDLRKLFGE-EAPEPLRVLVSDWHTDPWPRGSYSLPQYGPGHD 403

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|..
gi 568982489  374 AYDIIAEEIQGTVFFAGEATNRHFPQTVTGAYLSGVREASKI 415
Cdd:pfam01593 404 DYRPLARTPDPGLFFAGEHTSTGYPGTVEGAIESGRRAARAV 445
YobN COG1231
Monoamine oxidase [Amino acid transport and metabolism];
4-417 2.08e-73

Monoamine oxidase [Amino acid transport and metabolism];


Pssm-ID: 440844 [Multi-domain]  Cd Length: 440  Bit Score: 236.36  E-value: 2.08e-73
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489   4 SVTVLEAKDRIGGRVW-DDKSFKGVVVGRGPQIVNGcinNPVALM--CEQLGISMRKL--GERCDLIQEGGRITdptvdk 78
Cdd:COG1231   32 DVTVLEARDRVGGRVWtLRFGDDGLYAELGAMRIPP---SHTNLLalARELGLPLEPFpnENGNALLYLGGKRV------ 102

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489  79 RMDFHFNALLDVVSEWRK-DKTLLQDVPLGEKIEEIY-----RAFVKESGIQFSelegqVLQFHLSNLEYACGSSLHQVS 152
Cdd:COG1231  103 RAGEIAADLRGVAELLAKlLRALAAALDPWAHPAAELdreslAEWLRRNGASPS-----ARRLLGLLGAGEYGADPDELS 177

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489 153 ARSWDHNEFFAQFAGDHTLLTPGYSTIIEKLAEGL--DIRLKSPVQSIDYTGDEVQVTTTDGMGHSAQKVLVTVPLAILQ 230
Cdd:COG1231  178 LLDLLRYAASAGGGAQQFRIVGGMDQLPRALAAELgdRIRLGAPVTRIRQDGDGVTVTTDDGGTVRADAVIVTVPPSVLR 257

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489 231 RgaIQFNPPLSEKKMKAINSLGAGIIEKIALQFPYRFW--DSKVQGADFfghvppsaSQRGLFAVFYDMDSQQQS--VLM 306
Cdd:COG1231  258 R--IEFDPPLPAAKRAAIQRLPYGAAIKVFLQFDRPFWeeDGLYGGISL--------TDLPIRQTWYPSNGPDGGagVLL 327

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489 307 SVITGEAVASLRTMDDKQVLQQCMGILRELFKEqEIPEPTKYFVTRWSTEPWIQMAYSFVKTFGSGEAYDIIAeEIQGTV 386
Cdd:COG1231  328 GYVGGDDARALAALSPEERVAAALEQLARIFGV-YAAEPVDYVSTDWGRDPWSRGAYAAAPPGQLTAAGPALA-EPDGRI 405

                        410       420       430
                 ....*....|....*....|....*....|.
gi 568982489 387 FFAGEATNRHFPQTVTGAYLSGVREASKIAA 417
Cdd:COG1231  406 HFAGEHTSDEWPGWVEGALESGERAAAEILA 436
 
Name Accession Description Interval E-value
PLN02328 PLN02328
lysine-specific histone demethylase 1 homolog
 5-415 1.91e-88

lysine-specific histone demethylase 1 homolog


Pssm-ID: 215187 [Multi-domain]  Cd Length: 808  Bit Score: 284.96  E-value: 1.91e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489   5 VTVLEAKDRIGGRVwddKSFK----GVVVGR--GPQIVNGCINNPVALMCEQLGISMRKLGERCDLIQEGGRITDPTVDK 78
Cdd:PLN02328 264 VVVLEGRARPGGRV---KTMKmkgdGVVAAAdlGGSVLTGINGNPLGVLARQLGLPLHKVRDICPLYLPDGKAVDAEIDS 340

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489  79 RMDFHFNALLDVVSEWRK---DKTLLQDVPLGEKIEeiyrAFVKESGIQFSELEGQVLQFHLSNLEYACGSSLHQVSARS 155
Cdd:PLN02328 341 KIEASFNKLLDRVCKLRQamiEEVKSVDVNLGTALE----AFRHVYKVAEDPQERMLLNWHLANLEYANASLMSNLSMAY 416

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489 156 WDHNEFFaQFAGDHTLLTPGYSTIIEKLAEGLDIRLKSPVQSIDYTGDEVQVTTTdGMGHSAQKVLVTVPLAILQRGAIQ 235
Cdd:PLN02328 417 WDQDDPY-EMGGDHCFIPGGNDTFVRELAKDLPIFYERTVESIRYGVDGVIVYAG-GQEFHGDMVLCTVPLGVLKKGSIE 494

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489 236 FNPPLSEKKMKAINSLGAGIIEKIALQFPYRFWDSKVqgaDFFGHVPPSASQRGLFAVFYDMDS-QQQSVLMSVITGEAV 314
Cdd:PLN02328 495 FYPELPQRKKDAIQRLGYGLLNKVALLFPYNFWGGEI---DTFGHLTEDPSMRGEFFLFYSYSSvSGGPLLIALVAGDAA 571

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489 315 ASLRTMDDKQVLQQCMGILRELFKEQEI--PEPTKYFVTRWSTEPWIQMAYSFVKTFGSGEAYDIIAEEI-QGTVFFAGE 391
Cdd:PLN02328 572 VKFETLSPVESVKRVLQILRGIFHPKGIvvPDPVQAVCTRWGKDCFTYGSYSYVAVGSSGDDYDILAESVgDGRVFFAGE 651

                        410       420
                 ....*....|....*....|....
gi 568982489 392 ATNRHFPQTVTGAYLSGVREASKI 415
Cdd:PLN02328 652 ATNKQYPATMHGAFLSGMREAANI 675
PLN03000 PLN03000
amine oxidase
 5-416 7.49e-84

amine oxidase


Pssm-ID: 178578 [Multi-domain]  Cd Length: 881  Bit Score: 274.20  E-value: 7.49e-84
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489   5 VTVLEAKDRIGGRVWDDK---SFKGVVVGRGPQIVNGCINNPVALMCEQLGISMRKLGERCDLIQEGGRITDPTVDKRMD 81
Cdd:PLN03000 210 VTVLEGRKRPGGRVYTKKmeaNRVGAAADLGGSVLTGTLGNPLGIIARQLGSSLYKVRDKCPLYRVDGKPVDPDVDLKVE 289

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489  82 FHFNALLDVVSEWRK---DKTLlqDVPLGEKIEeiyrAFVKESGIQFSELEGQVLQFHLSNLEYACGSSLHQVSARSWDH 158
Cdd:PLN03000 290 VAFNQLLDKASKLRQlmgDVSM--DVSLGAALE----TFRQVSGNDVATEEMGLFNWHLANLEYANAGLVSKLSLAFWDQ 363

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489 159 NEFFaQFAGDHTLLTPGYSTIIEKLAEGLDIRLKSPVQSIDYTGDEVQVTTTDGMgHSAQKVLVTVPLAILQRGAIQFNP 238
Cdd:PLN03000 364 DDPY-DMGGDHCFLPGGNGRLVQALAENVPILYEKTVQTIRYGSNGVKVIAGNQV-YEGDMVLCTVPLGVLKNGSIKFVP 441

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489 239 PLSEKKMKAINSLGAGIIEKIALQFPYRFWDSKVqgaDFFGHVPPSASQRGLFAVFYDMDS-QQQSVLMSVITGEAVASL 317
Cdd:PLN03000 442 ELPQRKLDCIKRLGFGLLNKVAMLFPYVFWSTDL---DTFGHLTEDPNYRGEFFLFYSYAPvAGGPLLIALVAGEAAHKF 518

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489 318 RTMDDKQVLQQCMGILRELFKEQEI--PEPTKYFVTRWSTEPWIQMAYSFVKTFGSGEAYDIIAEEI-QGTVFFAGEATN 394
Cdd:PLN03000 519 ETMPPTDAVTRVLHILRGIYEPQGInvPDPLQTVCTRWGGDPFSLGSYSNVAVGASGDDYDILAESVgDGRLFFAGEATT 598

                        410       420
                 ....*....|....*....|..
gi 568982489 395 RHFPQTVTGAYLSGVREASKIA 416
Cdd:PLN03000 599 RRYPATMHGAFVTGLREAANMA 620
PLN02976 PLN02976
amine oxidase
 4-415 7.61e-81

amine oxidase


Pssm-ID: 215527 [Multi-domain]  Cd Length: 1713  Bit Score: 271.36  E-value: 7.61e-81
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489    4 SVTVLEAKDRIGGRVWDDKSFKGVVVGRGPQIVNGC--------INNPVALMCEQLGISMRKLGERCDL--IQEGGRITD 73
Cdd:PLN02976  718 SVTVLEARSRIGGRVYTDRSSLSVPVDLGASIITGVeadvaterRPDPSSLICAQLGLELTVLNSDCPLydVVTGEKVPA 797

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489   74 pTVDKRMDFHFNALLD----VVSE-----------------------------WRKDKTLLQDVPL--GEKIEEIYRAFV 118
Cdd:PLN02976  798 -DLDEALEAEYNSLLDdmvlLVAQkgehamkmsledgleyalkrrrmprpgvdIDETELGNAADDLydSASTGVDGGHCE 876

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489  119 KESGIQF-SELEGQVLQFHLSNLEYACGSSLHQVSARSWDHNEFFAQFAGDHTLLTPGYSTIIEKLAEGLDIRLKSPVQS 197
Cdd:PLN02976  877 KESKEDVlSPLERRVMNWHFAHLEYGCAALLKEVSLPYWNQDDVYGGFGGAHCMIKGGYSNVVESLAEGLDIHLNHVVTD 956

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489  198 IDYTGDE----------VQVTTTDGMGHSAQKVLVTVPLAILQRGAIQFNPPLSEKKMKAINSLGAGIIEKIALQFPYRF 267
Cdd:PLN02976  957 VSYGSKDagasgssrkkVKVSTSNGSEFLGDAVLITVPLGCLKAETIKFSPPLPDWKYSSIQRLGFGVLNKVVLEFPEVF 1036

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489  268 WDSKVqgaDFFGHVPPSASQRGLFAVFYDMDSQQQS-VLMSVITGEAVASLRTMDDKQVLQQCMGILRELFKEQEIPEPT 346
Cdd:PLN02976 1037 WDDSV---DYFGATAEETDLRGQCFMFWNVKKTVGApVLIALVVGKAAIDGQSMSSSDHVNHALMVLRKLFGEALVPDPV 1113

                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568982489  347 KYFVTRWSTEPWIQMAYSFVKTFGSGEAYDIIAEEIQGTVFFAGEATNRHFPQTVTGAYLSGVREASKI 415
Cdd:PLN02976 1114 ASVVTDWGRDPFSYGAYSYVAIGASGEDYDILGRPVENCLFFAGEATCKEHPDTVGGAMMSGLREAVRI 1182
PLN02529 PLN02529
lysine-specific histone demethylase 1
 5-415 2.34e-79

lysine-specific histone demethylase 1


Pssm-ID: 178144 [Multi-domain]  Cd Length: 738  Bit Score: 259.44  E-value: 2.34e-79
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489   5 VTVLEAKDRIGGRVWDDK-SFKG--VVVGRGPQIVNGCINNPVALMCEQLGISMRKLGERCDLIQEGGRITDPTVDKRMD 81
Cdd:PLN02529 186 VVVLEGRNRPGGRVYTQKmGRKGqfAAVDLGGSVITGIHANPLGVLARQLSIPLHKVRDNCPLYKPDGALVDKEIDSNIE 265

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489  82 FHFNALLDVVSEWRK-DKTLLQDVPLGEKIEEIYRAFvkesGIQFSELEGQVLQFHLSNLEYACGSSLHQVSARSWDHNE 160
Cdd:PLN02529 266 FIFNKLLDKVTELRQiMGGFANDISLGSVLERLRQLY----GVARSTEERQLLDWHLANLEYANAGCLSDLSAAYWDQDD 341

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489 161 FFaQFAGDHTLLTPGYSTIIEKLAEGLDIRLKSPVQSIDYTGDEVQVTTTDGMgHSAQKVLVTVPLAILQRGAIQFNPPL 240
Cdd:PLN02529 342 PY-EMGGDHCFLAGGNWRLINALCEGVPIFYGKTVDTIKYGNDGVEVIAGSQV-FQADMVLCTVPLGVLKKRTIRFEPEL 419

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489 241 SEKKMKAINSLGAGIIEKIALQFPYRFWDSKVqgaDFFGHVPPSASQRGLFAVFYDMDS-QQQSVLMSVITGEAVASLRT 319
Cdd:PLN02529 420 PRRKLAAIDRLGFGLLNKVAMVFPSVFWGEEL---DTFGCLNESSNKRGEFFLFYGYHTvSGGPALVALVAGEAAQRFEN 496

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489 320 MDDKQVLQQCMGILRELF--KEQEIPEPTKYFVTRWSTEPWIQMAYSFVKTFGSGEAYDIIAEEIQGTVFFAGEATNRHF 397
Cdd:PLN02529 497 TDPSTLLHRVLSVLRGIYnpKGINVPDPIQTICTRWGSDPLSYGSYSHVRVQSSGSDYDILAESVSGRLFFAGEATTRQY 576

                        410
                 ....*....|....*...
gi 568982489 398 PQTVTGAYLSGVREASKI 415
Cdd:PLN02529 577 PATMHGAFLSGLREASRI 594
Amino_oxidase pfam01593
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, ...
 3-415 9.64e-74

Flavin containing amine oxidoreductase; This family consists of various amine oxidases, including maze polyamine oxidase (PAO)and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation; these include various neurotransmitters, neurotoxins and trace amines. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium. PAOs in plants, bacteria and protozoa oxidase spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.


Pssm-ID: 396255 [Multi-domain]  Cd Length: 446  Bit Score: 237.39  E-value: 9.64e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489    3 PSVTVLEAKDRIGGRVWDDKsFKGVVVGRGPQIVNGCiNNPVALMCEQLGI----SMRKLGERCDLIQEGGRITDPTVDk 78
Cdd:pfam01593  15 HDVTVLEARDRVGGRIRTVR-DDGFLIELGAMWFHGA-QPPLLALLKELGLedrlVLPDPAPFYTVLFAGGRRYPGDFR- 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489   79 RMDFHFNALLDVVSEW----------------RKDKTLLQDVPLGEKIEEIYR-AFVKESGIQFSELEGQVLQFHLSNLE 141
Cdd:pfam01593  92 RVPAGWEGLLEFGRLLsipeklrlglaalasdALDEFDLDDFSLAESLLFLGRrGPGDVEVWDRLIDPELFAALPFASGA 171

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489  142 YACGSSLHQVSArSWDHNEFFAQFAGDHTLLTPGYSTIIEKLAE---GLDIRLKSPVQSIDYTGDEVQVTTTDGMGHSAQ 218
Cdd:pfam01593 172 FAGDPSELSAGL-ALPLLWALLGEGGSLLLPRGGLGALPDALAAqllGGDVRLNTRVRSIDREGDGVTVTLTDGEVIEAD 250

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489  219 KVLVTVPLAILQRgaIQFNPPLSEKKMKAINSLGAGIIEKIALQFPYRFWDSKvqgaDFFGHVPPSASQRGLFAVFYDMD 298
Cdd:pfam01593 251 AVIVTVPLGVLKR--ILFTPPLPPEKARAIRNLGYGPVNKVHLEFDRKFWPDL----GLLGLLSELLTGLGTAFSWLTFP 324

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489  299 SQ----QQSVLMSVIT-GEAVASLRTMDDKQVLQQCMGILRELFKEqEIPEPTKYFVTRWSTEPWIQMAYSFVKTFGSGE 373
Cdd:pfam01593 325 NRappgKGLLLLVYVGpGDRARELEGLSDEELLQAVLRDLRKLFGE-EAPEPLRVLVSDWHTDPWPRGSYSLPQYGPGHD 403

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|..
gi 568982489  374 AYDIIAEEIQGTVFFAGEATNRHFPQTVTGAYLSGVREASKI 415
Cdd:pfam01593 404 DYRPLARTPDPGLFFAGEHTSTGYPGTVEGAIESGRRAARAV 445
YobN COG1231
Monoamine oxidase [Amino acid transport and metabolism];
4-417 2.08e-73

Monoamine oxidase [Amino acid transport and metabolism];


Pssm-ID: 440844 [Multi-domain]  Cd Length: 440  Bit Score: 236.36  E-value: 2.08e-73
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489   4 SVTVLEAKDRIGGRVW-DDKSFKGVVVGRGPQIVNGcinNPVALM--CEQLGISMRKL--GERCDLIQEGGRITdptvdk 78
Cdd:COG1231   32 DVTVLEARDRVGGRVWtLRFGDDGLYAELGAMRIPP---SHTNLLalARELGLPLEPFpnENGNALLYLGGKRV------ 102

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489  79 RMDFHFNALLDVVSEWRK-DKTLLQDVPLGEKIEEIY-----RAFVKESGIQFSelegqVLQFHLSNLEYACGSSLHQVS 152
Cdd:COG1231  103 RAGEIAADLRGVAELLAKlLRALAAALDPWAHPAAELdreslAEWLRRNGASPS-----ARRLLGLLGAGEYGADPDELS 177

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489 153 ARSWDHNEFFAQFAGDHTLLTPGYSTIIEKLAEGL--DIRLKSPVQSIDYTGDEVQVTTTDGMGHSAQKVLVTVPLAILQ 230
Cdd:COG1231  178 LLDLLRYAASAGGGAQQFRIVGGMDQLPRALAAELgdRIRLGAPVTRIRQDGDGVTVTTDDGGTVRADAVIVTVPPSVLR 257

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489 231 RgaIQFNPPLSEKKMKAINSLGAGIIEKIALQFPYRFW--DSKVQGADFfghvppsaSQRGLFAVFYDMDSQQQS--VLM 306
Cdd:COG1231  258 R--IEFDPPLPAAKRAAIQRLPYGAAIKVFLQFDRPFWeeDGLYGGISL--------TDLPIRQTWYPSNGPDGGagVLL 327

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489 307 SVITGEAVASLRTMDDKQVLQQCMGILRELFKEqEIPEPTKYFVTRWSTEPWIQMAYSFVKTFGSGEAYDIIAeEIQGTV 386
Cdd:COG1231  328 GYVGGDDARALAALSPEERVAAALEQLARIFGV-YAAEPVDYVSTDWGRDPWSRGAYAAAPPGQLTAAGPALA-EPDGRI 405

                        410       420       430
                 ....*....|....*....|....*....|.
gi 568982489 387 FFAGEATNRHFPQTVTGAYLSGVREASKIAA 417
Cdd:COG1231  406 HFAGEHTSDEWPGWVEGALESGERAAAEILA 436
PLN02268 PLN02268
probable polyamine oxidase
 5-415 6.17e-62

probable polyamine oxidase


Pssm-ID: 177909 [Multi-domain]  Cd Length: 435  Bit Score: 206.08  E-value: 6.17e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489   5 VTVLEAKDRIGGRVWDDKSFkGVVVGRGPQIVNG-CINNPVALMCEQLGISM-RKLG----------ERCDLIQEGGRIT 72
Cdd:PLN02268  26 VTLLESRDRIGGRVHTDYSF-GFPVDMGASWLHGvCNENPLAPLIGRLGLPLyRTSGdnsvlydhdlESYALFDMDGNQV 104

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489  73 DPTVDKRMDFHFNALLDVVSEWRKDKTllQDVPLgekIEEIYRAFVKESGIQFSELEGQVLQFHLSNLEYACGSSLHQVS 152
Cdd:PLN02268 105 PQELVTKVGETFERILEETEKVRDEHE--EDMSL---LQAISIVLERHPELRLEGLAHEVLQWYLCRMEGWFAADADTIS 179

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489 153 ARSWDHNEFFAqfaGDHTLLTPGYSTIIEKLAEGLDIRLKSPVQSIDYTGDEVQVTTTDGMGHSAQKVLVTVPLAILQRG 232
Cdd:PLN02268 180 LKSWDQEELLE---GGHGLMVRGYDPVINTLAKGLDIRLNHRVTKIVRRYNGVKVTVEDGTTFVADAAIIAVPLGVLKAN 256

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489 233 AIQFNPPLSEKKMKAINSLGAGIIEKIALQFPYRFWDSkvqgADFFGHVPPSASQRGLFAVFYdmDSQQQSVLMSVITGE 312
Cdd:PLN02268 257 IIKFEPELPEWKEEAISDLGVGIENKIALHFDSVFWPN----VEFLGVVAPTSYGCSYFLNLH--KATGHPVLVYMPAGR 330

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489 313 AVASLRTMDDKQVLQQCMGILRELFKEQeiPEPTKYFVTRWSTEPWIQMAYSFVKTFGSGEAYDIIAEEIqGTVFFAGEA 392
Cdd:PLN02268 331 LARDIEKLSDEAAANFAMSQLKKMLPDA--TEPVQYLVSRWGSDPNSLGCYSYDLVGKPHDLYERLRAPV-DNLFFAGEA 407

                        410       420
                 ....*....|....*....|...
gi 568982489 393 TNRHFPQTVTGAYLSGVREASKI 415
Cdd:PLN02268 408 TSSDFPGSVHGAYSTGVMAAEEC 430
PLN02676 PLN02676
polyamine oxidase
 5-415 4.88e-39

polyamine oxidase


Pssm-ID: 215362 [Multi-domain]  Cd Length: 487  Bit Score: 146.40  E-value: 4.88e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489   5 VTVLEAKDRIGGRVwDDKSFKGVVVGRGP---QIVNGCINNPVALMCEQLGisMRKLGERCDLI------QEGGRITDPT 75
Cdd:PLN02676  53 ILILEATDRIGGRM-RKANFAGVSVELGAnwvEGVGGPESNPIWELANKLK--LRTFYSDFDNLssniykQDGGLYPKKV 129

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489  76 VDKRMDfhfnaLLDVVSEWrkdKTLLQDVPLGEKIEEIyrafvkeSGIQFSELEGQ--------VLQFHLSNLEYA---C 144
Cdd:PLN02676 130 VQKSMK-----VADASDEF---GENLSISLSAKKAVDI-------SILTAQRLFGQvpktplemVIDYYNYDYEFAeppR 194

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489 145 GSSLHQVSARSwdhneFFAQFAGDHTLLTP--GYSTIIEKLAEG---------LDIRLK--SPVQSIDYTGDEVQVTTTD 211
Cdd:PLN02676 195 VTSLKNTEPNP-----TFVDFGEDEYFVADprGYESLVYYLAEQflstksgkiTDPRLKlnKVVREISYSKNGVTVKTED 269

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489 212 GMGHSAQKVLVTVPLAILQRGAIQFNPPLSEKKMKAINSLGAGIIEKIALQFPYRFWDSKvQGADFFGHvppSASQRGLF 291
Cdd:PLN02676 270 GSVYRAKYVIVSVSLGVLQSDLIKFKPPLPDWKIEAIYQFDMAVYTKIFLKFPYKFWPSG-PGTEFFLY---AHERRGYY 345

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489 292 AVFYDMDSQQ--QSVLMSVITGEAVASLRTMDDKQVLQQCMGILRELFKEQeIPEPTKYFVTRWSTEPWIQMAYSFVKTF 369
Cdd:PLN02676 346 PFWQHLENEYpgSNVLFVTVTDEESRRIEQQPDSETKAEIMEVLRKMFGPN-IPEATDILVPRWWSNRFFKGSYSNWPIG 424

                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*.
gi 568982489 370 GSGEAYDIIAEEIqGTVFFAGEATNRHFPQTVTGAYLSGVrEASKI 415
Cdd:PLN02676 425 VSRYEFDQIRAPV-GRVYFTGEHTSEKYNGYVHGAYLAGI-DTAND 468
PLN02568 PLN02568
polyamine oxidase
 5-415 6.52e-34

polyamine oxidase


Pssm-ID: 215308 [Multi-domain]  Cd Length: 539  Bit Score: 132.65  E-value: 6.52e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489   5 VTVLEAKDRIGGRVwDDKSFKGVVVGRGPQIVNGCINNPV--------ALMCEQLGISMRKLGERCDLIQEGGRITDPTV 76
Cdd:PLN02568  36 LTVVEGGDRIGGRI-NTSEFGGERIEMGATWIHGIGGSPVykiaqeagSLESDEPWECMDGFPDRPKTVAEGGFEVDPSI 114

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489  77 DKRMDFHFNALLDVVSEWRKDKTLLQDVPLGEKIE----------------------EIYRAFVKE-------SGIQFSE 127
Cdd:PLN02568 115 VESISTLFRGLMDDAQGKLIEPSEVDEVDFVKLAAkaarvcesggggsvgsflrrglDAYWDSVSAdeqikgyGGWSRKL 194

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489 128 LEGQVLQFHlSNLEyACGSSLHQVSARSWDHNEFFAQFAGDHTLLTPGYSTIIEKLAEGLD---IRLKSPVQSIDYTGDE 204
Cdd:PLN02568 195 LEEAIFTMH-ENTQ-RTYTSADDLSTLDLAAESEYRMFPGEEITIAKGYLSVIEALASVLPpgtIQLGRKVTRIEWQDEP 272

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489 205 VQVTTTDGMGHSAQKVLVTVPLAILQRGAIQ----FNPPLSEKKMKAINSLGAGIIEKIALQFPYRFwDSKVQGADFFgh 280
Cdd:PLN02568 273 VKLHFADGSTMTADHVIVTVSLGVLKAGIGEdsglFSPPLPDFKTDAISRLGFGVVNKLFVELSPRP-DGSPEDVAKF-- 349

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489 281 vpPSasqrgLFAVFYDMDSQQQ---------------------SVLMSVITGEAVASLRTMDDKQVLQQCMGILRELFKE 339
Cdd:PLN02568 350 --PF-----LQMAFHRSDSEARhdkipwwmrrtasicpihknsSVLLSWFAGKEALELEKLSDEEIIRGVQTTLSSFLKR 422

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489 340 QEIPEP---------------------TKYFVTRWSTEPWIQMAYSFVKTFGSGEAYDIIAEEIQGT------------V 386
Cdd:PLN02568 423 RVAGLGsqshplcnggassndgsrwkfVKVLKSKWGTDPLFLGSYSYVAVGSSGDDLDRMAEPLPRIsdhdqaggpplqL 502

                        490       500
                 ....*....|....*....|....*....
gi 568982489 387 FFAGEATNRHFPQTVTGAYLSGVREASKI 415
Cdd:PLN02568 503 LFAGEATHRTHYSTTHGAYFSGLREANRL 531
HemY COG1232
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ...
 4-353 8.99e-11

Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis


Pssm-ID: 440845 [Multi-domain]  Cd Length: 443  Bit Score: 63.31  E-value: 8.99e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489   4 SVTVLEAKDRIGGRVwddKSF--KGVVVGRGPQIVngCINNPVAL-MCEQLGIS--MRKLGERCDLIQEGGRITD-PTvd 77
Cdd:COG1232   26 EVTVLEASDRVGGLI---RTVevDGFRIDRGPHSF--LTRDPEVLeLLRELGLGdeLVWPNTRKSYIYYGGKLHPlPQ-- 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489  78 KRMDFHFNALLDVVSEWR-------KDKTLLQDVPLGEKI-----EEIYRAFVKE--SGIQFSELEGQVLQF---HLSNL 140
Cdd:COG1232   99 GPLALLRSPLLSLAGKLRallellaPRRPPGEDESLAEFVrrrfgREVYERLVEPllEGVYAGDPDELSADWafpRLKRL 178

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489 141 EYACGSSLHQVSA--RSWDHNEFFAQFAGdhtlltpGYSTIIEKLAEGL---DIRLKSPVQSIDYTGDEVQVTTTDGMGH 215
Cdd:COG1232  179 ELEHGSLIKGALAlrKGAKAGEVFGYLRG-------GLGTLVEALAEALeagEIRLGTRVTAIEREGGGWRVTTSDGETI 251

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489 216 SAQKVLVTVPLAILQRgAIQFNPPLSEKKMKAINSLGAGIiekIALQFPyrfwDSKVQGADFFGHVPPSASQRGLFAVFY 295
Cdd:COG1232  252 EADAVVSATPAPALAR-LLAPLPPEVAAALAGIPYASVAV---VALGFD----RPDLPPPDGFGWLVPRDEGVPILAVTF 323

                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 568982489 296 ------DMDSQQQSVLMSVITGEAVASLRTMDDKQVLQQCMGILRELFKEQeiPEPTKYFVTRW 353
Cdd:COG1232  324 ssnkwpHRAPDGKVLLRLEVGGAGDPELWQLSDEELVALALADLRKLLGID--AEPVDTRVVRW 385
PRK07233 PRK07233
hypothetical protein; Provisional
 175-253 3.71e-10

hypothetical protein; Provisional


Pssm-ID: 235977 [Multi-domain]  Cd Length: 434  Bit Score: 61.44  E-value: 3.71e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568982489 175 GYSTIIEKLAE-----GLDIRLKSPVQSIDYTGDEVQVTTTDGMGHSAQKVLVTVPLAILQRgaiqFNPPLSEK---KMK 246
Cdd:PRK07233 196 GFATLIDALAEaiearGGEIRLGTPVTSVVIDGGGVTGVEVDGEEEDFDAVISTAPPPILAR----LVPDLPADvlaRLR 271


                 ....*..
gi 568982489 247 AINSLGA 253
Cdd:PRK07233 272 RIDYQGV 278
NAD_binding_8 pfam13450
NAD(P)-binding Rossmann-like domain;
4-51 1.48e-03

NAD(P)-binding Rossmann-like domain;


Pssm-ID: 433218 [Multi-domain]  Cd Length: 67  Bit Score: 36.74  E-value: 1.48e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*...
gi 568982489    4 SVTVLEAKDRIGGRvWDDKSFKGVVVGRGPQIVNGCINNPVALMCEQL 51
Cdd:pfam13450  21 RVLVLEKRDRLGGN-AYSYRVPGYVFDYGAHIFHGSDEPNVRDLLDEL 67
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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