|
Name |
Accession |
Description |
Interval |
E-value |
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
354-1093 |
1.18e-16 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 86.26 E-value: 1.18e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 354 KNGIHQAALASFKAEIRHLLERVDQVVREKEKLRSDLDKAEKLKSLMASEVDDHHAAI-ERRNEYN-LRKLDEEYKERIA 431
Cdd:TIGR02168 219 KAELRELELALLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVsELEEEIEeLQKELYALANEIS 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 432 ALKNELRQEREQmLQQVGKQRVELEQEIQKAKTEENYIRDRLALSLKENNRLETELLENAEKLAEYEsltqKLQRSLENV 511
Cdd:TIGR02168 299 RLEQQKQILRER-LANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELE----AELEELESR 373
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 512 LAEKFGDLDPSSAEFFLQEERLAQMRNEYEQQCRLLQDQVDELQSELEEYQAQGRVLRLPLKNSLSEELDGHSGGIEPDQ 591
Cdd:TIGR02168 374 LEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQ 453
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 592 GPGSEECNPLNMSIEAELVIEQMKEQHHRDLCHLRLELEDKVRHYEKQLDDTRVASEQEQAAMKQKYEQGVhtlekrVSE 671
Cdd:TIGR02168 454 EELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSGILGV------LSE 527
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 672 LRSEIADLEGQ-AAVLREAHHKASCRHEEEKRQLQmAFDEEKAQLQE---ELRQEHERELQARLQQAAESFRQEREGLAQ 747
Cdd:TIGR02168 528 LISVDEGYEAAiEAALGGRLQAVVVENLNAAKKAI-AFLKQNELGRVtflPLDSIKGTEIQGNDREILKNIEGFLGVAKD 606
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 748 AAWTEEKVRGLEQSYQEQLLSLEEkhalekeelreelsehhrreLQEGRYESEKLQEENSILRNEITTLNEEDSIS---- 823
Cdd:TIGR02168 607 LVKFDPKLRKALSYLLGGVLVVDD--------------------LDNALELAKKLRPGYRIVTLDGDLVRPGGVITggsa 666
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 824 --NLKLEELNGSQEELWQKIETIEQEKASIQTMVEKLKKQVSDLKIKNQQLDSENIELSQKNSQNKEELKTLNQRlAEML 901
Cdd:TIGR02168 667 ktNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAE-VEQL 745
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 902 CQREEPGACTSEKWEQENASLKEELDhykvQTSTLVSSLEAELSEVKLQTHVMEQENLLLKDELERLKQLHRcpDLSDFQ 981
Cdd:TIGR02168 746 EERIAQLSKELTELEAEIEELEERLE----EAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELT--LLNEEA 819
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 982 QKMSSILSYNEKLLKEKEVLSEELKSCADKLAES-SLLEHRIATMKQEQTAWEEQSESLKSQLAVSQAKVQNLEDVLQNV 1060
Cdd:TIGR02168 820 ANLRERLESLERRIAATERRLEDLEEQIEELSEDiESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEEL 899
|
730 740 750
....*....|....*....|....*....|...
gi 568978938 1061 NLQMAEIESDLQVTRQEKEALKQEVMSLHRQLQ 1093
Cdd:TIGR02168 900 SEELRELESKRSELRRELEELREKLAQLELRLE 932
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
315-847 |
1.01e-14 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 79.60 E-value: 1.01e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 315 QEEGIENSQEILKALDFSLDGNINLTELTLALENELLVTKNG---IHQAALASFKAEIRHLLERVDQVVREKEKLRSDLD 391
Cdd:COG1196 247 ELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAeeyELLAELARLEQDIARLEERRRELEERLEELEEELA 326
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 392 KAEKLKSLMASEVDDHHAAIERRNEyNLRKLDEEYKERIAALKNELRQEREQMLQQVG--KQRVELEQEIQKAKTEENYI 469
Cdd:COG1196 327 ELEEELEELEEELEELEEELEEAEE-ELEEAEAELAEAEEALLEAEAELAEAEEELEElaEELLEALRAAAELAAQLEEL 405
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 470 RDRLALSLKENNRLETELLENAEKLAEYESLTQKLQRSLENVLAEKfgdldpssAEFFLQEERLAQMRNEYEQQCRLLQD 549
Cdd:COG1196 406 EEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEE--------AELEEEEEALLELLAELLEEAALLEA 477
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 550 QVDELQSELEEYQAQGRVLRLPLKNSLSEELDGHSGGIEPDQGPGSEEC-NPLNMSIEAELVIEQMKEQHHRDLCHLRLE 628
Cdd:COG1196 478 ALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVaVLIGVEAAYEAALEAALAAALQNIVVEDDE 557
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 629 LEDKVRHYEKQLDDTRvASEQEQAAMKQKYEQGVHTLEKRVSELRSEIADLEGQAAVLREAHHKASCRHEEEKRQLQMAF 708
Cdd:COG1196 558 VAAAAIEYLKAAKAGR-ATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAAL 636
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 709 DEEKAQLQEELRQEHERELQARLQQAAESFRQEREGLAQAAWTEEKVRGLEQSYQEQLLSLEEKHALEKEELREELSEHH 788
Cdd:COG1196 637 RRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEER 716
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*....
gi 568978938 789 RRELQEGRYESEKLQEENSILRNEITTLNEEDSISNLKLEELNGSQEELWQKIETIEQE 847
Cdd:COG1196 717 LEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLERE 775
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
404-1166 |
2.23e-12 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 72.01 E-value: 2.23e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 404 VDDHHAAIERrneyNLRKLDEEYK--ERIAALKNELRQEREQML----QQVGKQRVELEQEIQKAKTEENYIRDRLALSL 477
Cdd:TIGR02168 191 LEDILNELER----QLKSLERQAEkaERYKELKAELRELELALLvlrlEELREELEELQEELKEAEEELEELTAELQELE 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 478 KENNRLETELLENAEKLAEYESLTQKLQRSLENVLAEKFgdldpssaeffLQEERLAQMRNEYEQqcrlLQDQVDELQSE 557
Cdd:TIGR02168 267 EKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQ-----------ILRERLANLERQLEE----LEAQLEELESK 331
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 558 LEEYQAQgrvlrlplKNSLSEELDghsggiepdqgpgseecnplnmsiEAELVIEQMKEQHHrdlchlrlELEDKVRHYE 637
Cdd:TIGR02168 332 LDELAEE--------LAELEEKLE------------------------ELKEELESLEAELE--------ELEAELEELE 371
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 638 KQLDDTRVASEQEQAAMKQKYEQgVHTLEKRVSELRSEIADLEGQAAVLREAHHKASCRHEEEKRQLQMAFDEEKAQLQE 717
Cdd:TIGR02168 372 SRLEELEEQLETLRSKVAQLELQ-IASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELE 450
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 718 ELRQEHEReLQARLQQAAESFRQEREGLAQAAWTEEKVRGLEQSYQEQLLSLEEKHALEKEELREELSEH-HRRELQEG- 795
Cdd:TIGR02168 451 ELQEELER-LEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSgILGVLSELi 529
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 796 ----RYE-------SEKLQ----EENSILRNEITTLNEEDS-------ISNLKLEELNGSQEELWQKIETIEQEKASIQT 853
Cdd:TIGR02168 530 svdeGYEaaieaalGGRLQavvvENLNAAKKAIAFLKQNELgrvtflpLDSIKGTEIQGNDREILKNIEGFLGVAKDLVK 609
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 854 MVEKLKKQVSDLKIKNQQLDSENIELSQKNSQNKEE-LKTL---------------NQRLAEMLCQREEPGACTS--EKW 915
Cdd:TIGR02168 610 FDPKLRKALSYLLGGVLVVDDLDNALELAKKLRPGYrIVTLdgdlvrpggvitggsAKTNSSILERRREIEELEEkiEEL 689
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 916 EQENASLKEELDHYKVQTSTlvssLEAELSEVKLQTHVMEQENLLLKDELERLKQLHR--CPDLSDFQQKMSSILSYNEK 993
Cdd:TIGR02168 690 EEKIAELEKALAELRKELEE----LEEELEQLRKELEELSRQISALRKDLARLEAEVEqlEERIAQLSKELTELEAEIEE 765
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 994 LLKEKEVLSEELKSCADKLAEsslLEHRIATMKQEQTAWEEQSESLKSQLAVSQAKVQNLEDVLQNVNLQMAEIESDLQV 1073
Cdd:TIGR02168 766 LEERLEEAEEELAEAEAEIEE---LEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLED 842
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 1074 TRQEKEALKQEVMSL---HRQLQNAIDKdwVSETAPHLSGLRGQQRRLSwdkldHLMNEEPQLLCQESKRLQTVVQNTQA 1150
Cdd:TIGR02168 843 LEEQIEELSEDIESLaaeIEELEELIEE--LESELEALLNERASLEEAL-----ALLRSELEELSEELRELESKRSELRR 915
|
810
....*....|....*.
gi 568978938 1151 DLTHSREKVRQLESNL 1166
Cdd:TIGR02168 916 ELEELREKLAQLELRL 931
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
531-1338 |
4.25e-12 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 71.24 E-value: 4.25e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 531 ERLAQMRNEYEQQCRLLQDQVD------ELQSELEEYQAQGRVLRLplkNSLSEELDghsggiepdqgpgseecnplnms 604
Cdd:TIGR02168 189 DRLEDILNELERQLKSLERQAEkaerykELKAELRELELALLVLRL---EELREELE----------------------- 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 605 iEAELVIEQMKEQHHrdlchlrlELEDKVRHYEKQLDDTRVaseqEQAAMKQKYEQgvhtLEKRVSELRSEIADLEGQAA 684
Cdd:TIGR02168 243 -ELQEELKEAEEELE--------ELTAELQELEEKLEELRL----EVSELEEEIEE----LQKELYALANEISRLEQQKQ 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 685 VLREAhhkascRHEEEKRQLQMAFDEEKAQLQEELRQEHERELQARLQQAAESFRQEREGLAQAAWTEEKVRGLEQSYQE 764
Cdd:TIGR02168 306 ILRER------LANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEE 379
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 765 QLLSLEEKHALEKEELREelsehHRRELQEGRYESEKLQEENSILRNEITTLNEEdsISNLKLEELNGSQEELWQKIETI 844
Cdd:TIGR02168 380 QLETLRSKVAQLELQIAS-----LNNEIERLEARLERLEDRRERLQQEIEELLKK--LEEAELKELQAELEELEEELEEL 452
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 845 EQEKASIQTMVEKLKKQvsdLKIKNQQLDSENIELSQKNSQNK------EELKTLNQRLAEMLCQREEPGACTS------ 912
Cdd:TIGR02168 453 QEELERLEEALEELREE---LEEAEQALDAAERELAQLQARLDslerlqENLEGFSEGVKALLKNQSGLSGILGvlseli 529
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 913 ---EKWEQE-NASLKEELDHYKVQTSTLVSSLEAELSEVKLQTHVM-----EQENLLLKDELERLKQ----LHRCPDLSD 979
Cdd:TIGR02168 530 svdEGYEAAiEAALGGRLQAVVVENLNAAKKAIAFLKQNELGRVTFlpldsIKGTEIQGNDREILKNiegfLGVAKDLVK 609
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 980 FQQKMSSILSY--------------NEKLLKEKE-----------VLSEELKSCADKLAESSLLEHR--IATMKQEQTAW 1032
Cdd:TIGR02168 610 FDPKLRKALSYllggvlvvddldnaLELAKKLRPgyrivtldgdlVRPGGVITGGSAKTNSSILERRreIEELEEKIEEL 689
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 1033 EEQSESLKSQLAVSQAKVQNLEDVLQNVNLQMAEIESDLQVTRQEKEALKQEVMSLHRQLQNAidkdwvsetapHLSGLR 1112
Cdd:TIGR02168 690 EEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQL-----------SKELTE 758
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 1113 GQQRRLSWDKLDHLMNEEPQLLCQESKRLQTVVQNTQADLTHSREKVRQLESNLLPTKhQKQLNQPCTVKSTEQEKLTLK 1192
Cdd:TIGR02168 759 LEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLN-EEAANLRERLESLERRIAATE 837
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 1193 RECEQSQKEQSPTSRKV----GQMGSLERGLETIHLENEGLKKKQVRLDEKLMEMQPLRSTVTRSPSSHWD-LQLLQQQA 1267
Cdd:TIGR02168 838 RRLEDLEEQIEELSEDIeslaAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESkRSELRREL 917
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 568978938 1268 CPMvpREQFLQLQQQLLQAEKRSQHLQEELenrTSETNTPQGNQEHLVNLMEERMIEVEQKLKLVKRLLQE 1338
Cdd:TIGR02168 918 EEL--REKLAQLELRLEGLEVRIDNLQERL---SEEYSLTLEEAEALENKIEDDEEEARRRLKRLENKIKE 983
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
380-1060 |
1.10e-11 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 70.17 E-value: 1.10e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 380 VREKEKLR--SDLDKAEKLKSLMASEVDDHHA--AIERRNEYNLRKLDEEYKERIAALKNELRQEREQMLQQVGKQRvel 455
Cdd:PTZ00121 1211 ERKAEEARkaEDAKKAEAVKKAEEAKKDAEEAkkAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAE--- 1287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 456 eqeiQKAKTEEnyirdrlaLSLKENNRLETELLENAEKLAEYESLTQKLQRSLENV-LAEKFGDLDPSSAEFFLQEERLA 534
Cdd:PTZ00121 1288 ----EKKKADE--------AKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKAdAAKKKAEEAKKAAEAAKAEAEAA 1355
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 535 QMRNEYEQQcrllQDQVDELQSELEEYQAQgrvlRLPLKNSLSEELDGHSGGIEPDQGPGSEECNPLNMSIEAELVIEQM 614
Cdd:PTZ00121 1356 ADEAEAAEE----KAEAAEKKKEEAKKKAD----AAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKA 1427
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 615 KEQHHRDLCHLRLELEDKVRHYEKQLDDTRVASE-QEQAAMKQKYEQGVHTLE--KRVSELRSEIADLEGQAAVLR---E 688
Cdd:PTZ00121 1428 EEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEaKKKAEEAKKADEAKKKAEeaKKADEAKKKAEEAKKKADEAKkaaE 1507
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 689 AHHKA-SCRHEEEKRQLQMAFDEEKAQLQEELRQEHERELQARLQQAAESFRQEREGLAQAAWTEEKVRGLEQSYQEQLL 767
Cdd:PTZ00121 1508 AKKKAdEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAK 1587
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 768 SLEEKHALEKEELREELSEHHRREL---QEGRYESEKLQEENSIlRNEITTLNEEDSISNLKLEELNGSQEELWQKIETI 844
Cdd:PTZ00121 1588 KAEEARIEEVMKLYEEEKKMKAEEAkkaEEAKIKAEELKKAEEE-KKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEE 1666
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 845 EQEKASIQTMVEKLKKQVSDLKIKNQQLDSENIELSQKNSQNKEELKtlNQRLAEMLCQREEPGACTSE---KWEQENAS 921
Cdd:PTZ00121 1667 AKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAE--EKKKAEELKKAEEENKIKAEeakKEAEEDKK 1744
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 922 LKEEL---DHYKVQTSTLVSSLEAELSEVKLQTHVMEQENLLLKDELERLKQLHRCPDL-SDFQQKMSSILSYNEKLLKE 997
Cdd:PTZ00121 1745 KAEEAkkdEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDIfDNFANIIEGGKEGNLVINDS 1824
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568978938 998 KEVLSEELKSCADklAESSLLEHRIATMKQEQTAWEEQSESLKSQlAVSQAKVQNLEDVLQNV 1060
Cdd:PTZ00121 1825 KEMEDSAIKEVAD--SKNMQLEEADAFEKHKFNKNNENGEDGNKE-ADFNKEKDLKEDDEEEI 1884
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
359-970 |
1.12e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 69.58 E-value: 1.12e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 359 QAALASFKAEIRHLLERVDQVVREKEKLRSDLDKAEKlkslmasevddhhAAIERRNEYNLRKLDEEYKERIAALKNELR 438
Cdd:COG1196 245 EAELEELEAELEELEAELAELEAELEELRLELEELEL-------------ELEEAQAEEYELLAELARLEQDIARLEERR 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 439 QEREQMLQQVGKQRVELEQEIQKAKTEENYIRDRLALSLKENNRLETELLENAEKLAEYESLTQKLQRSLEnvlaekfgd 518
Cdd:COG1196 312 RELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELE--------- 382
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 519 ldpssaEFFLQEERLAQMRNEYEQQCRLLQDQVDELQSELEEYQAQGRVLRLPLKNSLSEELDghsggiepdqgpgseec 598
Cdd:COG1196 383 ------ELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEE----------------- 439
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 599 nplnmsiEAELVIEQMKEQhhrdlchlrLELEDKVRHYEKQLDDTRVASEQEQAAMKQKYEQgVHTLEKRVSELRSEIAD 678
Cdd:COG1196 440 -------EEEALEEAAEEE---------AELEEEEEALLELLAELLEEAALLEAALAELLEE-LAEAAARLLLLLEAEAD 502
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 679 LEGQAAVLREAHHKASCRHEEEKRQLQMAFDEEKAQLQEE----LRQEHERELQARLQQAAESFRQEREGLAQAAWTEEK 754
Cdd:COG1196 503 YEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAalaaALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKI 582
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 755 VRGLEQSYQEQLLSLEEKHALEKEELREELSEHHRRELQEGRYESEKLQEENSILRneITTLNEEDSISNLKLEELNGSQ 834
Cdd:COG1196 583 RARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRR--AVTLAGRLREVTLEGEGGSAGG 660
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 835 EELWQKIETIEQEKASIQTMVEKLKKQVSDLKIKNQQLDSENIELSQKNSQNKEELKTLNQRLAEMLCQREEPGAcTSEK 914
Cdd:COG1196 661 SLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAERE-ELLE 739
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*.
gi 568978938 915 WEQENASLKEELDHYKVQTSTLVSSLEAELSEVKLQTHVMEQENLLLKDELERLKQ 970
Cdd:COG1196 740 ELLEEEELLEEEALEELPEPPDLEELERELERLEREIEALGPVNLLAIEEYEELEE 795
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
344-865 |
5.04e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 67.65 E-value: 5.04e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 344 LALENELLVTKNGIHQAALASFKAEIRHLLERVDQVVREKEKLRSDLDKAEKlkslmasevdDHHAAIERRNEY------ 417
Cdd:COG1196 251 LEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQ----------DIARLEERRRELeerlee 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 418 ------NLRKLDEEYKERIAALKNEL------RQEREQMLQQVGKQRVELEQEIQKAKTEENYIRDRLALSLKENNRLET 485
Cdd:COG1196 321 leeelaELEEELEELEEELEELEEELeeaeeeLEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAA 400
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 486 ELLENAEKLAEYESLTQKLQRSLENVLAEKFGDLDPSSAEfFLQEERLAQMRNEYEQQCRLLQDQVDELQSELEEYQAQG 565
Cdd:COG1196 401 QLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEE-EEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAAL 479
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 566 RVLRLPL------KNSLSEELDGHSGgiePDQGPGSEECNPLNMSIEAELVIEQMKEQHHRDLCHLRLEledkVRHYEKQ 639
Cdd:COG1196 480 AELLEELaeaaarLLLLLEAEADYEG---FLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALA----AALQNIV 552
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 640 LDDTRVASEQEQAAMKQKyeQGVHTLEKRVSELRSEIADLEGQAAVLREAHHKASCRHEEEKRQLQMAFDEEKAQLQEEL 719
Cdd:COG1196 553 VEDDEVAAAAIEYLKAAK--AGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAA 630
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 720 RQEHERELQARLQQAAESFRQEREGLAQAAWTEE---KVRGLEQSYQEQLLSLEEKHALEKEELREELSEHHRRELQEGR 796
Cdd:COG1196 631 RLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGgsrRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELA 710
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568978938 797 YESEKLQEENSILRNEITTLNEEDSISNLKLEELNGSQEELWQKIETIEQEKASIQTMVEKLKKQVSDL 865
Cdd:COG1196 711 EAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEAL 779
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
359-970 |
5.91e-11 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 67.39 E-value: 5.91e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 359 QAALASFKAEIRHLLERVDQVVREKEKLRSDLDKAEKLKSLMASEVddhhaaieRRNEYNLRKLDEEYKERIAALKNELR 438
Cdd:TIGR02168 357 EAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEI--------ERLEARLERLEDRRERLQQEIEELLK 428
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 439 QEREQMLQQVGKQRVELEQEIQKAKTEENYIRDRLALSLKENNRLETELLENAEKLAEYESLTQKLQRSLENVL------ 512
Cdd:TIGR02168 429 KLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEgfsegv 508
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 513 ------AEKFGDLDPSSAEFFlqeerlaQMRNEYEQ------QCRLLQDQVDELQSELEEYQAQ-----GRVLRLPLKNS 575
Cdd:TIGR02168 509 kallknQSGLSGILGVLSELI-------SVDEGYEAaieaalGGRLQAVVVENLNAAKKAIAFLkqnelGRVTFLPLDSI 581
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 576 LSEELDGHSGGIEPDQGPGSEECNPL-NMSIEAELVIEQMkeqhhrdLCHLR--------LELEDKVRHYEK--QLDDTR 644
Cdd:TIGR02168 582 KGTEIQGNDREILKNIEGFLGVAKDLvKFDPKLRKALSYL-------LGGVLvvddldnaLELAKKLRPGYRivTLDGDL 654
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 645 VAS-------------------------EQEQAAMKQKYEQgvhtLEKRVSELRSEIADLEGQAAVLREAHHKASCRHEE 699
Cdd:TIGR02168 655 VRPggvitggsaktnssilerrreieelEEKIEELEEKIAE----LEKALAELRKELEELEEELEQLRKELEELSRQISA 730
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 700 EKRQLQMAFDEEKAQLQEELRQEHER-ELQARLQQAAESFRQEREGLAQAAWTEEKVRGLEQSYQEQLLSLEEKHALEKE 778
Cdd:TIGR02168 731 LRKDLARLEAEVEQLEERIAQLSKELtELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRA 810
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 779 ELREelsehHRRELQEGRYESEKLQEENSILRNEITTLNEEDSISNLKLEELNGSQEELWQKIETIEQEKASIQTMVEKL 858
Cdd:TIGR02168 811 ELTL-----LNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASL 885
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 859 KKQVSDLKIKNQQLDSENIELSQKNSQNKEELKTLNQRLAEMLCQREEPGACTSEKWEQENASLKEELDHYKVQTSTLVS 938
Cdd:TIGR02168 886 EEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKIED 965
|
650 660 670
....*....|....*....|....*....|....*
gi 568978938 939 S---LEAELSEVKLQTHVMEQENLLLKDELERLKQ 970
Cdd:TIGR02168 966 DeeeARRRLKRLENKIKELGPVNLAAIEEYEELKE 1000
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
360-1134 |
1.19e-10 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 66.63 E-value: 1.19e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 360 AALASFKAEIRHLLERVDQVVREKEKLRSDLDkaEKLKSLMASEVDDHHAaiERRNEYNLRKLDEEYKERIAALKNELRQ 439
Cdd:TIGR02169 163 AGVAEFDRKKEKALEELEEVEENIERLDLIID--EKRQQLERLRREREKA--ERYQALLKEKREYEGYELLKEKEALERQ 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 440 ereqmLQQVGKQRVELEQEIQKAKTEENYIRDRLA--------LSLKENNRLETELLENAEKLAEYESLTQKLQRSLEnV 511
Cdd:TIGR02169 239 -----KEAIERQLASLEEELEKLTEEISELEKRLEeieqlleeLNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIA-E 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 512 LAEKFGDLDPSSAEFFLQ----EERLAQMRNEYEQQCRL----------LQDQVDELQSELEEYQAQGRVLRLPLKnSLS 577
Cdd:TIGR02169 313 KERELEDAEERLAKLEAEidklLAEIEELEREIEEERKRrdklteeyaeLKEELEDLRAELEEVDKEFAETRDELK-DYR 391
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 578 EELDGHSGGIEPDQGpgsEECNPLNMSIEAELVIEQMK------EQHHRDLCHLRLELEDKVRHYE---KQLDDTRVASE 648
Cdd:TIGR02169 392 EKLEKLKREINELKR---ELDRLQEELQRLSEELADLNaaiagiEAKINELEEEKEDKALEIKKQEwklEQLAADLSKYE 468
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 649 QEQAAMKQKYEQgvhtLEKRVSELRSEIADLEGQAAVLREAHHKASCRHEEEKRQLQMAFD--EEKAQLQEELRQEHERE 726
Cdd:TIGR02169 469 QELYDLKEEYDR----VEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGtvAQLGSVGERYATAIEVA 544
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 727 LQARLQ-----------QAAESFRQEREGLAQ-------AAWTEEKVRGLEQSYQEQLLSL---EEKHALEKEELREELS 785
Cdd:TIGR02169 545 AGNRLNnvvveddavakEAIELLKRRKAGRATflplnkmRDERRDLSILSEDGVIGFAVDLvefDPKYEPAFKYVFGDTL 624
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 786 EHHRREL---QEGRYESEKLQEE------------NSILRNEITTLNEEDsisnlKLEELNGSQEELWQKIETIEQEKAS 850
Cdd:TIGR02169 625 VVEDIEAarrLMGKYRMVTLEGElfeksgamtggsRAPRGGILFSRSEPA-----ELQRLRERLEGLKRELSSLQSELRR 699
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 851 IQTMVEKLKKQVSDLKIKNQQLDSENIELSQKNSQNKEELKTLNQRLAEMlcqreepgactsekwEQENASLKEELDHyk 930
Cdd:TIGR02169 700 IENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSL---------------EQEIENVKSELKE-- 762
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 931 vqtstlvssLEAELSEVKLQTHVMEQEnlllkdelerLKQLHRCPDLSDFQQKMSSILSYNEKLLKEKEVLSEELKSCAD 1010
Cdd:TIGR02169 763 ---------LEARIEELEEDLHKLEEA----------LNDLEARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNR 823
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 1011 KLAESSLLEHRIATMKQEQTAWEEQSESLKSQLAVSQAKVQNLEDVLQNVNLQMAEIESDLQVTRQEKEALKQEVmslhR 1090
Cdd:TIGR02169 824 LTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQL----R 899
|
810 820 830 840
....*....|....*....|....*....|....*....|....*
gi 568978938 1091 QLQNAIDK-DWVSETAPHLSGLRGQQRRLSWDKLDHLMNEEPQLL 1134
Cdd:TIGR02169 900 ELERKIEElEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDE 944
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
607-940 |
3.57e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 64.96 E-value: 3.57e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 607 AELVIEQMKEQHHRDLCHLRLELEDKVRHYEKQLDDTRVASEQEQAAMKQkyeqgVHTLEKRVSELRSEIADLEGQAAVL 686
Cdd:COG1196 212 AERYRELKEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAE-----LAELEAELEELRLELEELELELEEA 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 687 REAHHKASCRHEEEKRQLQMAfDEEKAQLQEELRQEHERELQARLQQAAESFRQEREgLAQAAWTEEKVRGLEQSYQEQL 766
Cdd:COG1196 287 QAEEYELLAELARLEQDIARL-EERRRELEERLEELEEELAELEEELEELEEELEEL-EEELEEAEEELEEAEAELAEAE 364
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 767 LSLEEKHALEKEElreelsehhRRELQEGRYESEKLQEENSILRNEITTLNEEdsisnlkLEELNGSQEELWQKIETIEQ 846
Cdd:COG1196 365 EALLEAEAELAEA---------EEELEELAEELLEALRAAAELAAQLEELEEA-------EEALLERLERLEEELEELEE 428
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 847 EKASIQTMVEKLKKQVSDLKIKNQQLDSENIELSQKNSQNKEELKTLNQRLAEmlcQREEPGACTSEKWEQENASLKEEL 926
Cdd:COG1196 429 ALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAE---LLEELAEAAARLLLLLEAEADYEG 505
|
330
....*....|....
gi 568978938 927 DHYKVQTSTLVSSL 940
Cdd:COG1196 506 FLEGVKAALLLAGL 519
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
315-1084 |
1.40e-09 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 63.07 E-value: 1.40e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 315 QEEGIENSQEILKALDFSLDGNINLTELTLALENELLVTKNGIHQAALAsfKAEIRHLLERVDQVVREKEKLRSDLDKAE 394
Cdd:pfam02463 276 EEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKK--KAEKELKKEKEEIEELEKELKELEIKREA 353
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 395 KLKSLMASEvddhhaAIERRNEYNLRKLDEEYKERIAALKNELRQEREQMlqqvgkqrvELEQEIQKAKTEENYIRDRLA 474
Cdd:pfam02463 354 EEEEEEELE------KLQEKLEQLEEELLAKKKLESERLSSAAKLKEEEL---------ELKSEEEKEAQLLLELARQLE 418
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 475 LSLKENNRLETELLENAEKLAEYESLTQKLQRSLENVLAEKFGDLDPSSAEFFLQEERLAQMRNEYEQQCRLLQDQVDEL 554
Cdd:pfam02463 419 DLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEER 498
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 555 QSELEEYQAQGRVLRLPLKNSLSEELDGHSGGIEpDQGPGSEECNPLNMSIEAELVIEQMKEQHHRDLCHLRLELEDKVR 634
Cdd:pfam02463 499 SQKESKARSGLKVLLALIKDGVGGRIISAHGRLG-DLGVAVENYKVAISTAVIVEVSATADEVEERQKLVRALTELPLGA 577
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 635 HYEKQLDDTRVASEQEQAAMKQKYEQGVHTLEKRVSELRSEIA-------DLEGQAAVLREAHHKASCRHEEEKRQLQMA 707
Cdd:pfam02463 578 RKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKrakvvegILKDTELTKLKESAKAKESGLRKGVSLEEG 657
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 708 FDEEKAQLQEELRQEHERELQARLQQAAESFRQEREGLAQAAWTEEKVRGLEQSYQEQLLSLEEKHALEKEELREELSEH 787
Cdd:pfam02463 658 LAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEE 737
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 788 HRRELQEGRYESEKLQEENSILRNEITTLNEEDSISNLKLEELNGSQEELWQkietiEQEKASIQTMVEKLKKQVSDLKI 867
Cdd:pfam02463 738 LKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVE-----EEKEEKLKAQEEELRALEEELKE 812
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 868 KNQQLDSENIELSQKnsQNKEELKTLNQRLAEMLCQREEPGACTSEKWEQENASLKEELDHykvQTSTLVSSLEAELSEV 947
Cdd:pfam02463 813 EAELLEEEQLLIEQE--EKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQE---LLLKEEELEEQKLKDE 887
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 948 KLQTHVMEQENLLLKDELERLKQLHRCPDLSDfQQKMSSILSYNEKLLKEKEVLSEELKSCADKLAES-SLLEHRIATMK 1026
Cdd:pfam02463 888 LESKEEKEKEEKKELEEESQKLNLLEEKENEI-EERIKEEAEILLKYEEEPEELLLEEADEKEKEENNkEEEEERNKRLL 966
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*...
gi 568978938 1027 QEQTAWEEQSESLKSQLAVSQAKVQnlEDVLQNVNLQMAEIESDLQVTRQEKEALKQE 1084
Cdd:pfam02463 967 LAKEELGKVNLMAIEEFEEKEERYN--KDELEKERLEEEKKKLIRAIIEETCQRLKEF 1022
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
531-906 |
2.30e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 62.38 E-value: 2.30e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 531 ERLAQMRNEYEQQCRLLQDQVDELQSELEEYQAQGRVLRLpLKNSLSEELDGhsggiepdqgpgseecnpLNMSIEAELV 610
Cdd:TIGR02168 680 EELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRK-ELEELSRQISA------------------LRKDLARLEA 740
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 611 IEQMKEQHHRDLCHLRLELEDKVRHYEKQLDDTR---VASEQEQAAMKQKYEQG---VHTLEKRVSELRSEIADLEGQAA 684
Cdd:TIGR02168 741 EVEQLEERIAQLSKELTELEAEIEELEERLEEAEeelAEAEAEIEELEAQIEQLkeeLKALREALDELRAELTLLNEEAA 820
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 685 VLREAHHKASCRHEEEKRQLQMAfDEEKAQLQEEL-----RQEHERELQARLQQAAESFRQEREGLAQAAwteEKVRGLE 759
Cdd:TIGR02168 821 NLRERLESLERRIAATERRLEDL-EEQIEELSEDIeslaaEIEELEELIEELESELEALLNERASLEEAL---ALLRSEL 896
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 760 QSYQEQLLSLEEKHALEkeelreelsehhRRELQEGRYESEKLQEENSILRNEITTLNEEDSisnlklEELNGSQEELWQ 839
Cdd:TIGR02168 897 EELSEELRELESKRSEL------------RRELEELREKLAQLELRLEGLEVRIDNLQERLS------EEYSLTLEEAEA 958
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568978938 840 KIETIEQEKASIQTMVEKLKKQVSDLKIKNqqLDSEnielsqknsqnkEELKTLNQRLAEMLCQREE 906
Cdd:TIGR02168 959 LENKIEDDEEEARRRLKRLENKIKELGPVN--LAAI------------EEYEELKERYDFLTAQKED 1011
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
531-881 |
3.10e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 61.88 E-value: 3.10e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 531 ERLAQMRNEYEQQCRLLQDQVD------ELQSELEEYQAQGRVLRLplkNSLSEELDghsggiepdqgpgseecnplnms 604
Cdd:COG1196 189 ERLEDILGELERQLEPLERQAEkaeryrELKEELKELEAELLLLKL---RELEAELE----------------------- 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 605 iEAELVIEQMKEQhhrdlchlRLELEDKVRHYEKQLDDTRVASEQEQAAmkqkyeqgVHTLEKRVSELRSEIADLEGQAA 684
Cdd:COG1196 243 -ELEAELEELEAE--------LEELEAELAELEAELEELRLELEELELE--------LEEAQAEEYELLAELARLEQDIA 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 685 VLREAHHKASCRHEE---EKRQLQMAFDEEKAQLQEELRQehERELQARLQQAAESFRQEREGLAQAAWTEEKVRGLEQS 761
Cdd:COG1196 306 RLEERRRELEERLEEleeELAELEEELEELEEELEELEEE--LEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEE 383
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 762 YQEQLLSLEEKHALEKEELREELSEHHRRELQEGRYESEKLQEENSILRNEITTLNEEDSISNLKLEELNGSQEELWQKI 841
Cdd:COG1196 384 LAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLE 463
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 568978938 842 ETIEQEKASIQTMVEKLKKQVSDLKIKNQQLDSENIELSQ 881
Cdd:COG1196 464 LLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADY 503
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
359-689 |
3.70e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 61.61 E-value: 3.70e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 359 QAALASFKAEIRHLLERVDQVVREKEKLRSDLDKAEKLKSLMASEVDDHHAAIERRNEY--NLRKLDEEYKERIAALKNE 436
Cdd:TIGR02168 690 EEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERiaQLSKELTELEAEIEELEER 769
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 437 LRQEREQmLQQVGKQRVELEQEIQKAKTEENYIRDRLALSLKENNRLETELLENAEKLAEYESLTQKLQRSLEnvlaekf 516
Cdd:TIGR02168 770 LEEAEEE-LAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLE------- 841
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 517 gDLDPSSAEFFLQEERLAQMRNEYEQQCRLLQDQVDELQSELEEYQAQGRVLRLPLKNsLSEELDGHSGGIEPDQGpGSE 596
Cdd:TIGR02168 842 -DLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEE-LSEELRELESKRSELRR-ELE 918
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 597 ECNPLNMSIEAELVIEQMKEQHHRD--LCHLRLELEDKVRHYEKQLDDTRVAsEQEQAAMKQK--------------YEQ 660
Cdd:TIGR02168 919 ELREKLAQLELRLEGLEVRIDNLQErlSEEYSLTLEEAEALENKIEDDEEEA-RRRLKRLENKikelgpvnlaaieeYEE 997
|
330 340
....*....|....*....|....*....
gi 568978938 661 gvhtLEKRVSELRSEIADLEGQAAVLREA 689
Cdd:TIGR02168 998 ----LKERYDFLTAQKEDLTEAKETLEEA 1022
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
358-978 |
8.83e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 60.46 E-value: 8.83e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 358 HQAALASFKAEIRHLLERVDQVVREKEKLRSDLDKAEKLKSLMASEVDDHHAAIER-RNEYN-LRKLDEEYKERIAALKN 435
Cdd:TIGR02168 293 LANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEElKEELEsLEAELEELEAELEELES 372
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 436 ELRQEREQMLQQVGKqRVELEQEIQKAKTEENYIRDRLALSLKENNRLETELLENAEKLAEYESLTQKLQRS-LENVLAE 514
Cdd:TIGR02168 373 RLEELEEQLETLRSK-VAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEeLEEELEE 451
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 515 KFGDLDPSSAEFFLQEERLAQMRNE---YEQQCRLLQDQVDELQSELEEYQAQGRVLRLPLKNSlsEELDGHSG----GI 587
Cdd:TIGR02168 452 LQEELERLEEALEELREELEEAEQAldaAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQ--SGLSGILGvlseLI 529
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 588 EPDQG------------------PGSEECN-----------------PLNMSIEAELVIEQMKE-QHHRDLCHLRLELED 631
Cdd:TIGR02168 530 SVDEGyeaaieaalggrlqavvvENLNAAKkaiaflkqnelgrvtflPLDSIKGTEIQGNDREIlKNIEGFLGVAKDLVK 609
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 632 KVRHYEKQ----LDDTRVASEQEQAAMKQKY----------------------------EQGVHTLEKRVSELRSEIADL 679
Cdd:TIGR02168 610 FDPKLRKAlsylLGGVLVVDDLDNALELAKKlrpgyrivtldgdlvrpggvitggsaktNSSILERRREIEELEEKIEEL 689
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 680 EGQAAVLREAHHKAscrhEEEKRQLQMAFDEEKAQLQEELRQEHERELQARLQQAAESFRQEREGLAQAAWTEEKVRGLE 759
Cdd:TIGR02168 690 EEKIAELEKALAEL----RKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEE 765
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 760 QSYQEQLLSLEEKHALEKEELREELSEHHRRELQEGRYESEKLQEENSILRNEITTLNEEDSISNLKLEELNGSQEELWQ 839
Cdd:TIGR02168 766 LEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEE 845
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 840 KIETIEQEkasiqtmVEKLKKQVSDLKIKNQQLDSENIELSQKNSQNKEELKTLNQRLAEMLCQREEpgactsekWEQEN 919
Cdd:TIGR02168 846 QIEELSED-------IESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRE--------LESKR 910
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 920 ASLKEELDHYKvqtsTLVSSLEAELSEVKLQ-THVMEQENLLLKDELERLKQLHRCPDLS 978
Cdd:TIGR02168 911 SELRRELEELR----EKLAQLELRLEGLEVRiDNLQERLSEEYSLTLEEAEALENKIEDD 966
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
355-901 |
1.36e-08 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 59.54 E-value: 1.36e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 355 NGIHQAALasfKA-EIRHLLERVDQVVREKEKLRSDLDKAEKLKSLMAS-----EVDDHHAAIERRNEyNLRKLDEEY-- 426
Cdd:COG4913 238 ERAHEALE---DArEQIELLEPIRELAERYAAARERLAELEYLRAALRLwfaqrRLELLEAELEELRA-ELARLEAELer 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 427 -KERIAALKNELRQEREQMLQQVGKQRVELEQEIQKAKTEENYIRDRLALSLKENNRLETELLENAEKLAEYESLTQKLQ 505
Cdd:COG4913 314 lEARLDALREELDELEAQIRGNGGDRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALL 393
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 506 RSLENVLAEkfgdldpssaefflQEERLAQMRNEYEQqcrlLQDQVDELQSELEEYQAQG-----RVLRlpLKNSLSEEL 580
Cdd:COG4913 394 EALEEELEA--------------LEEALAEAEAALRD----LRRELRELEAEIASLERRKsnipaRLLA--LRDALAEAL 453
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 581 dghsgGIEPDQGPgseecnplnmsIEAELVieQMKEQHH-------RDLCHLRLEL------EDKVRHY------EKQLD 641
Cdd:COG4913 454 -----GLDEAELP-----------FVGELI--EVRPEEErwrgaieRVLGGFALTLlvppehYAAALRWvnrlhlRGRLV 515
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 642 DTRVASEQEQAAMKQKYEQG-VHTLEKRVSELRSEIADLEGQA-----------------AVLREAHHKAS-CRHE---- 698
Cdd:COG4913 516 YERVRTGLPDPERPRLDPDSlAGKLDFKPHPFRAWLEAELGRRfdyvcvdspeelrrhprAITRAGQVKGNgTRHEkddr 595
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 699 -EEKRQLQMAFD---------EEKAQLQEELR--QEHERELQARLQQAAESfRQEREGLAQAAWTEEKVRGLeqsyQEQL 766
Cdd:COG4913 596 rRIRSRYVLGFDnraklaaleAELAELEEELAeaEERLEALEAELDALQER-REALQRLAEYSWDEIDVASA----EREI 670
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 767 LSLEEKhalekeelreelsehhRRELQEGRYESEKLQEENSILRNEITTLNEEdsisnlkLEELNGSQEELWQKIETIEQ 846
Cdd:COG4913 671 AELEAE----------------LERLDASSDDLAALEEQLEELEAELEELEEE-------LDELKGEIGRLEKELEQAEE 727
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 568978938 847 EKASIQTMVEKLKK-----QVSDLKIKNQQLDSENIE------LSQKNSQNKEELKTLNQRLAEML 901
Cdd:COG4913 728 ELDELQDRLEAAEDlarleLRALLEERFAAALGDAVErelrenLEERIDALRARLNRAEEELERAM 793
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
697-1405 |
1.81e-08 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 59.30 E-value: 1.81e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 697 HEEEKRQLQMAfdEEKAQLQEELRQEHERELQARLQQAAESFRQEREGLAQAAWTEEKVRGLEQSYQEQLLSLEEKHALe 776
Cdd:TIGR02168 195 LNELERQLKSL--ERQAEKAERYKELKAELRELELALLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEE- 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 777 keelreelsehHRRELQEGRYESEKLQEENSILRNEITTLN-------EEDSISNLKLEELNGSQEELWQKIETIEQEKA 849
Cdd:TIGR02168 272 -----------LRLEVSELEEEIEELQKELYALANEISRLEqqkqilrERLANLERQLEELEAQLEELESKLDELAEELA 340
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 850 SIQTMVEKLKKQVSDLKIKNQQLDSENIELSQKNSQNKEELKTLNQRLAEMLCQREepgacTSEKWEQENASLKEELDHY 929
Cdd:TIGR02168 341 ELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIA-----SLNNEIERLEARLERLEDR 415
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 930 KVQTSTLVSSLEAELSEVKLQTHvmeQENLLLKDELErlkqlhrcpdlsdfqqkmssilsynEKLLKEKEVLSEELKSca 1009
Cdd:TIGR02168 416 RERLQQEIEELLKKLEEAELKEL---QAELEELEEEL-------------------------EELQEELERLEEALEE-- 465
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 1010 dklaesslLEHRIATMKQEQTAWEEQSESLKSQLAVSQAKVQNLEDVLQNVNLQMAEIE---------SDLQVTRQEKEA 1080
Cdd:TIGR02168 466 --------LREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSglsgilgvlSELISVDEGYEA 537
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 1081 LKQEVMSLHRQLQNAIDKDWVSETAPHLSglRGQQRRLSWDKLDHLMNEEPQLLCQESKRLQTVVQNTQADLTHSREKVR 1160
Cdd:TIGR02168 538 AIEAALGGRLQAVVVENLNAAKKAIAFLK--QNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLR 615
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 1161 QLESNLLPTKH-----------QKQLNQPCTVKSTEQEKLTlkreceqSQKEQSPTSRKvGQMGSLERGLETIHLENEgL 1229
Cdd:TIGR02168 616 KALSYLLGGVLvvddldnalelAKKLRPGYRIVTLDGDLVR-------PGGVITGGSAK-TNSSILERRREIEELEEK-I 686
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 1230 KKKQVRLDEKLMEMQPLRSTVTRSPSSHWDLQLLQQQAcpmvpREQFLQLQQQLLQAEKRSQHLQEELEnRTSETNTPQG 1309
Cdd:TIGR02168 687 EELEEKIAELEKALAELRKELEELEEELEQLRKELEEL-----SRQISALRKDLARLEAEVEQLEERIA-QLSKELTELE 760
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 1310 NQEHLVNLMEERMIEVEQKLKLVKRLLQEKVNQLKEQLCKNTKT----DAVVKDLYVENAQLLKALEMTEQRQKTAEKRN 1385
Cdd:TIGR02168 761 AEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREAldelRAELTLLNEEAANLRERLESLERRIAATERRL 840
|
730 740
....*....|....*....|
gi 568978938 1386 FLLEEKIASLSTIVRNLAPA 1405
Cdd:TIGR02168 841 EDLEEQIEELSEDIESLAAE 860
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
760-1059 |
2.33e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 58.79 E-value: 2.33e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 760 QSYQEQLLSLEEKHALEKEELREELSEHHRRELQEGRYESEKLQEENSILRNEITTLNEEDSISNLKLEELNGSQEELWQ 839
Cdd:COG1196 216 RELKEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 840 KIETIEQEKASiqtmvekLKKQVSDLKIKNQQLDSENIELSQKNSQNKEELKTLNQRLAEMLCQREEPGAC---TSEKWE 916
Cdd:COG1196 296 ELARLEQDIAR-------LEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAElaeAEEALL 368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 917 QENASLKEELDHYKVQTSTLVSSLEAELSEVKLQTHVMEQENLLLKDELERLKQLhrcpdlsdfQQKMSSILSYNEKLLK 996
Cdd:COG1196 369 EAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEEL---------EELEEALAELEEEEEE 439
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568978938 997 EKEVLSEELKSCADKLAESSLLEHRIATMKQEQTAWEEQSESLKSQLAVSQAKVQNLEDVLQN 1059
Cdd:COG1196 440 EEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEAD 502
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
347-899 |
2.93e-08 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 58.54 E-value: 2.93e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 347 ENELLVTKNGIHQAALASFKAEIRHLLERVDQVVREKEKLRSDLDKAEKLKSLMASEVDDHHAAIERrneynlrkldeey 426
Cdd:TIGR02169 365 ELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAG------------- 431
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 427 kerIAALKNELRQEREQMLQQVGKQRVELEQEIQKAKTEENYIRDRLAlslkENNRLETELLENAEKLAEYESLTQKLQ- 505
Cdd:TIGR02169 432 ---IEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKE----EYDRVEKELSKLQRELAEAEAQARASEe 504
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 506 RSLENVLAEKFgdLDPSSAEFFLQEERLAQMRNEYEQQCRL-----LQDQV---DELQSELEEYQAQ---GRVLRLPLKN 574
Cdd:TIGR02169 505 RVRGGRAVEEV--LKASIQGVHGTVAQLGSVGERYATAIEVaagnrLNNVVvedDAVAKEAIELLKRrkaGRATFLPLNK 582
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 575 SLSEELDGHSGGIEPDQGPGSE--ECNP-----LNMSIEAELVIEQMkEQHHRDLCHLRL-----ELEDKV-----RHYE 637
Cdd:TIGR02169 583 MRDERRDLSILSEDGVIGFAVDlvEFDPkyepaFKYVFGDTLVVEDI-EAARRLMGKYRMvtlegELFEKSgamtgGSRA 661
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 638 KQLDDTRVASEQEQAAMKQKYEQGvhtLEKRVSELRSEIADLEGQAAVLREAHHKASCRHEEEKRQLQMAfDEEKAQLQE 717
Cdd:TIGR02169 662 PRGGILFSRSEPAELQRLRERLEG---LKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQL-EQEEEKLKE 737
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 718 ELrQEHERELQArLQQAAESFRQEREGLA--------QAAWTEEKVRGLEQSY--------QEQLLSLEEKHALEKEELR 781
Cdd:TIGR02169 738 RL-EELEEDLSS-LEQEIENVKSELKELEarieeleeDLHKLEEALNDLEARLshsripeiQAELSKLEEEVSRIEARLR 815
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 782 EELSEHHRRELQEGRYESEK--LQEENSILRNEITTLNEEDSISNLKLEELNGSQEELWQKIETIEQEKASIQTMVEKLK 859
Cdd:TIGR02169 816 EIEQKLNRLTLEKEYLEKEIqeLQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELE 895
|
570 580 590 600
....*....|....*....|....*....|....*....|
gi 568978938 860 KQVSDLKIKNQQLDSENIELSQKNSQNKEELKTLNQRLAE 899
Cdd:TIGR02169 896 AQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSE 935
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
359-1023 |
3.94e-08 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 58.16 E-value: 3.94e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 359 QAALASFKAEIRHLLERVDQVVREKEKLRSDLDKAEKLKSLMASEVDDHHAAIERRNEyNLRKLDEEYKERIAALkNELR 438
Cdd:TIGR02169 293 KEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERK-RRDKLTEEYAELKEEL-EDLR 370
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 439 QEREQMLQQVGKQRVEL---EQEIQKAKTEENYIRDRLALSLKENNRLETELLENAEKLAEYESLTQKLQRSLENV---L 512
Cdd:TIGR02169 371 AELEEVDKEFAETRDELkdyREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKaleI 450
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 513 AEKFGDLDPSSAEFFLQEERLAQMRNEYEQqcrlLQDQVDELQSELEEYQAQGRVLRLPLKNS------LSEELDGHSGG 586
Cdd:TIGR02169 451 KKQEWKLEQLAADLSKYEQELYDLKEEYDR----VEKELSKLQRELAEAEAQARASEERVRGGraveevLKASIQGVHGT 526
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 587 IEPDQGPGSEECNPL---------NMSIEAELV----IEQMKE---------------QHHRDLCHLRL----------- 627
Cdd:TIGR02169 527 VAQLGSVGERYATAIevaagnrlnNVVVEDDAVakeaIELLKRrkagratflplnkmrDERRDLSILSEdgvigfavdlv 606
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 628 ELEDKVRHYEKQ-LDDTRVASEQEQAAMkqkyeqgvHTLEKRVSELRSEIADLEGQAAVLREAHHKASCRHEEEKRQLQM 706
Cdd:TIGR02169 607 EFDPKYEPAFKYvFGDTLVVEDIEAARR--------LMGKYRMVTLEGELFEKSGAMTGGSRAPRGGILFSRSEPAELQR 678
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 707 ------AFDEEKAQLQEELR--QEHERELQARLQQAAESFRQEREGLAQAAWTEEKVRGLEQSYQEQLLSLEEKHALEKE 778
Cdd:TIGR02169 679 lrerleGLKRELSSLQSELRriENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKS 758
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 779 ELREELSEHHRRELQEGRYESEKLQEENSILRNEITTLNEEDSISNLKLEELNGSQEELWQKIETIEQEKASIQTMVEKL 858
Cdd:TIGR02169 759 ELKELEARIEELEEDLHKLEEALNDLEARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQEL 838
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 859 KKQVSDLKIK----NQQLDSENIELSQKNSQNKE---ELKTLNQRLAEMLCQREEPGACTSE---KWEQENASLKEELDH 928
Cdd:TIGR02169 839 QEQRIDLKEQiksiEKEIENLNGKKEELEEELEEleaALRDLESRLGDLKKERDELEAQLRElerKIEELEAQIEKKRKR 918
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 929 YKVQTSTLvSSLEAELSEVKLQTHVMEQENLLLKDELERLKQLHRCpdlsdfQQKMSSILSYNEKLLKEKEVLSEELKSC 1008
Cdd:TIGR02169 919 LSELKAKL-EALEEELSEIEDPKGEDEEIPEEELSLEDVQAELQRV------EEEIRALEPVNMLAIQEYEEVLKRLDEL 991
|
730
....*....|....*....
gi 568978938 1009 ADKLA----ESSLLEHRIA 1023
Cdd:TIGR02169 992 KEKRAkleeERKAILERIE 1010
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
427-1004 |
3.98e-08 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 58.15 E-value: 3.98e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 427 KERIAALKNELRQEREQMLQQVGKQRVELEQ------EIQKAKTEENYIRDRLALSLKENNRLETELLENAEKLAEYESL 500
Cdd:PRK03918 188 TENIEELIKEKEKELEEVLREINEISSELPElreeleKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEER 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 501 TQKLQRSLEnVLAEKFGDLdPSSAEFFLQEERLAQMRNEYEQQCRLLQDQVDELQSELEEYQAqgRVLRLPLKNSLSEEL 580
Cdd:PRK03918 268 IEELKKEIE-ELEEKVKEL-KELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEE--RIKELEEKEERLEEL 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 581 DGHSGGIEPDQGPGSEECNPLNmsiEAELVIEQMKEQHHRDLCHLRLELEDKVRHYEKQlddtrvaseqeqaamKQKYEQ 660
Cdd:PRK03918 344 KKKLKELEKRLEELEERHELYE---EAKAKKEELERLKKRLTGLTPEKLEKELEELEKA---------------KEEIEE 405
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 661 GVHTLEKRVSELRSEIADLEGQAAVLREAHHKAS-CRH---EEEKRQLQMAFDEEKAQLQEELRQEHERElqarlqqaaE 736
Cdd:PRK03918 406 EISKITARIGELKKEIKELKKAIEELKKAKGKCPvCGReltEEHRKELLEEYTAELKRIEKELKEIEEKE---------R 476
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 737 SFRQEREGLAQAAWTEEKVRGLEQSYqEQLLSLEEKhalekeelreeLSEHHRRELQEGRYESEKLQEENSILRNEITTL 816
Cdd:PRK03918 477 KLRKELRELEKVLKKESELIKLKELA-EQLKELEEK-----------LKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSL 544
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 817 NEEDSisnlKLEELNGSQEELWQKIETIEQEKASIQTMVEKLK-KQVSDLKIKNQQLDS---ENIELSQKNSQNKEELKT 892
Cdd:PRK03918 545 KKELE----KLEELKKKLAELEKKLDELEEELAELLKELEELGfESVEELEERLKELEPfynEYLELKDAEKELEREEKE 620
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 893 LnQRLAEMLCQREEPGACTSEKWEQENASLKEELDHYKVQT-----------STLVSSLEAELSEVKLQTHVMEQENLLL 961
Cdd:PRK03918 621 L-KKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEEEyeelreeylelSRELAGLRAELEELEKRREEIKKTLEKL 699
|
570 580 590 600
....*....|....*....|....*....|....*....|...
gi 568978938 962 KDELERLKQLHRcpDLSDFQQKMSSILSYNEKLLKEKEVLSEE 1004
Cdd:PRK03918 700 KEELEEREKAKK--ELEKLEKALERVEELREKVKKYKALLKER 740
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
381-860 |
7.26e-08 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 57.08 E-value: 7.26e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 381 REKEKLRSDLDKAEKLKSLMASEVDDHHAAIERRNEYnlrkldEEYKERIAALKNELRQEREQMLQQvgKQRVELEQEIQ 460
Cdd:COG4717 64 RKPELNLKELKELEEELKEAEEKEEEYAELQEELEEL------EEELEELEAELEELREELEKLEKL--LQLLPLYQELE 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 461 KAKTEENYIRDRLalslkenNRLETELLENAEKLAEYESLTQKLQRsLENVLAEKFGDLDPSSAE----FFLQEERLAQM 536
Cdd:COG4717 136 ALEAELAELPERL-------EELEERLEELRELEEELEELEAELAE-LQEELEELLEQLSLATEEelqdLAEELEELQQR 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 537 RNEYEQQCRLLQDQVDELQSELEEYQAQGRVLRLPLKNSLSEELDGHSGGIEPDQGPGSEECNPLNMSIEAELVIEQMke 616
Cdd:COG4717 208 LAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGL-- 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 617 qhhrdLCHLRLELEDKVRHYEKQLDDTRVASEQEQAAmKQKYEQGVHTLEKRVSELRSEIADLEGQAAVLREAHHKAscR 696
Cdd:COG4717 286 -----LALLFLLLAREKASLGKEAEELQALPALEELE-EEELEELLAALGLPPDLSPEELLELLDRIEELQELLREA--E 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 697 HEEEKRQLQmAFDEEKAQLQEELRQEHERELQARLQQAAEsfRQEreglaqaawTEEKVRGLEQSYQEQLLSLEEKHALE 776
Cdd:COG4717 358 ELEEELQLE-ELEQEIAALLAEAGVEDEEELRAALEQAEE--YQE---------LKEELEELEEQLEELLGELEELLEAL 425
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 777 KEELREELSEHHRRELQEGRYESEKLQEENSILRNEITTLNEEDSISNLKLEelngsQEELWQKIETIEQEKASIQTMVE 856
Cdd:COG4717 426 DEEELEEELEELEEELEELEEELEELREELAELEAELEQLEEDGELAELLQE-----LEELKAELRELAEEWAALKLALE 500
|
....
gi 568978938 857 KLKK 860
Cdd:COG4717 501 LLEE 504
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
359-564 |
7.91e-08 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 57.23 E-value: 7.91e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 359 QAALASFKAEIRHLLERVDQVVREKEKLRSDLDkaeklkslmasEVDDHHAAIERRNEYNLRKLD-EEYKERIAALKNEL 437
Cdd:COG4913 609 RAKLAALEAELAELEEELAEAEERLEALEAELD-----------ALQERREALQRLAEYSWDEIDvASAEREIAELEAEL 677
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 438 RQERE--QMLQQVGKQRVELEQEIQKAKTEENYIRDRLALSLKENNRLETELLENAEKLAEYESLTQKLQRSLenvLAEK 515
Cdd:COG4913 678 ERLDAssDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRAL---LEER 754
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 568978938 516 FGDLdpssaeffLQEERLAQMRNEYEQQCRLLQDQVDELQSELEEYQAQ 564
Cdd:COG4913 755 FAAA--------LGDAVERELRENLEERIDALRARLNRAEEELERAMRA 795
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
403-1082 |
1.79e-07 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 55.89 E-value: 1.79e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 403 EVDDHHAAIERRNEYNLRKLDEEYKERIAALKNELRQEREQMLQQ---VGKQRVELEQEIQKAKTEENY---IRDRLALS 476
Cdd:pfam15921 60 ELDSPRKIIAYPGKEHIERVLEEYSHQVKDLQRRLNESNELHEKQkfyLRQSVIDLQTKLQEMQMERDAmadIRRRESQS 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 477 LKE-NNRLETEL--LENAEKLAE---YESLTQ-----KLQRSLENVLAEKFG---DLDPSSAEFFLQEERLAQMR----- 537
Cdd:pfam15921 140 QEDlRNQLQNTVheLEAAKCLKEdmlEDSNTQieqlrKMMLSHEGVLQEIRSilvDFEEASGKKIYEHDSMSTMHfrslg 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 538 NEYEQQCRLLQDQVDELQSELEEYQAQGRVLRLPLKNSLSEELDGHSGGIEP------------DQGPGSEECNPLNMSI 605
Cdd:pfam15921 220 SAISKILRELDTEISYLKGRIFPVEDQLEALKSESQNKIELLLQQHQDRIEQliseheveitglTEKASSARSQANSIQS 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 606 EAELVIEQMKEQHHRDLCHL----------RLEL-------EDKVRHYEKQLddTRVASEQEQA-AMKQKYEQGVHTLEK 667
Cdd:pfam15921 300 QLEIIQEQARNQNSMYMRQLsdlestvsqlRSELreakrmyEDKIEELEKQL--VLANSELTEArTERDQFSQESGNLDD 377
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 668 RVSELRSEIADLEGQAAVLREAHHKASCRHEEEK---RQLQMAFDEEKAQLQ--EELRQEHERELQARLQQAAESFRQER 742
Cdd:pfam15921 378 QLQKLLADLHKREKELSLEKEQNKRLWDRDTGNSitiDHLRRELDDRNMEVQrlEALLKAMKSECQGQMERQMAAIQGKN 457
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 743 EGL-------AQAAWTEEKVRGLEQSYQEQLLSLEEkhALEKEELREELSEHHRRELQEGRYESEKLQEENSILRNEITT 815
Cdd:pfam15921 458 ESLekvssltAQLESTKEMLRKVVEELTAKKMTLES--SERTVSDLTASLQEKERAIEATNAEITKLRSRVDLKLQELQH 535
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 816 L-NEEDSISN---------LKLEELNGSQEELWQKIETIEQ--------------EKASIQTMVEKLKKQVSDLKIKNQQ 871
Cdd:pfam15921 536 LkNEGDHLRNvqtecealkLQMAEKDKVIEILRQQIENMTQlvgqhgrtagamqvEKAQLEKEINDRRLELQEFKILKDK 615
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 872 LDSENIELSQKNSQNK-EELKTLN---QRLAEMLCQREEpgactSEKWEQENASLKEELDHYKVQTSTLVSSLEAELSEV 947
Cdd:pfam15921 616 KDAKIRELEARVSDLElEKVKLVNagsERLRAVKDIKQE-----RDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEM 690
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 948 KLQTHVMEQENLLLKDELERLKQLHRCPDLSDFQ--------QKMSSILSYNEKLLKEKEVLSEELKSCADK-----LAE 1014
Cdd:pfam15921 691 ETTTNKLKMQLKSAQSELEQTRNTLKSMEGSDGHamkvamgmQKQITAKRGQIDALQSKIQFLEEAMTNANKekhflKEE 770
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568978938 1015 SSLLEHRIATMKQEQTAWEEQSESLKSQLAVSQAKVQNLEDVLQNVNLQMAEIESDLQvtRQEKEALK 1082
Cdd:pfam15921 771 KNKLSQELSTVATEKNKMAGELEVLRSQERRLKEKVANMEVALDKASLQFAECQDIIQ--RQEQESVR 836
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
456-1242 |
2.20e-07 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 55.83 E-value: 2.20e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 456 EQEIQKAKTEENYirDRLALSLKENNRLETELLENAEKLAEYESLTQKLQRSLENVLAEKFGDLDPSSAEFFLQEERLAQ 535
Cdd:TIGR02168 176 ETERKLERTRENL--DRLEDILNELERQLKSLERQAEKAERYKELKAELRELELALLVLRLEELREELEELQEELKEAEE 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 536 MRNEYEQQCRLLQDQVDELQSELEEYQAQgrvlrlplKNSLSEELDGHSGGIEPdqgpgseecnplnmsieaelvIEQMK 615
Cdd:TIGR02168 254 ELEELTAELQELEEKLEELRLEVSELEEE--------IEELQKELYALANEISR---------------------LEQQK 304
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 616 EQHHRDLCHLRLELEDkvrhYEKQLddtrvaseQEQAAMKQKYEQGVHTLEKRVSELRSEIADLEGQAAVLREAHhKASC 695
Cdd:TIGR02168 305 QILRERLANLERQLEE----LEAQL--------EELESKLDELAEELAELEEKLEELKEELESLEAELEELEAEL-EELE 371
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 696 RHEEEKRQLQMAFDEEKAQLQEEL-----RQEHERELQARLQQAAESFRQEREGLAQAAWTEEKVRGLEQSYQEQLLSLE 770
Cdd:TIGR02168 372 SRLEELEEQLETLRSKVAQLELQIaslnnEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEE 451
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 771 EKHALEKEELREELSEHHRRELQEGRYESE-KLQEENSILRNEITTLNEEDSISN------LKLEELNGSQEELWQKIET 843
Cdd:TIGR02168 452 LQEELERLEEALEELREELEEAEQALDAAErELAQLQARLDSLERLQENLEGFSEgvkallKNQSGLSGILGVLSELISV 531
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 844 IEQEKASIQTM------------VEKLKKQVSDLKIKNQQ------LDSENIELSQKNSQNKEELKTLNQRLAEMLCQRE 905
Cdd:TIGR02168 532 DEGYEAAIEAAlggrlqavvvenLNAAKKAIAFLKQNELGrvtflpLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFD 611
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 906 EPGACTSEKW----------EQENASLKEELDHYK-------------------VQTSTLVSSLEAELSEVKLQTHVMEQ 956
Cdd:TIGR02168 612 PKLRKALSYLlggvlvvddlDNALELAKKLRPGYRivtldgdlvrpggvitggsAKTNSSILERRREIEELEEKIEELEE 691
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 957 ENLLLKDELERLKQLhrcpdlsdfQQKMSSILSYNEKLLKEKEVLSEELKSCADKL-AESSLLEHRIATMKQEQTAWEEQ 1035
Cdd:TIGR02168 692 KIAELEKALAELRKE---------LEELEEELEQLRKELEELSRQISALRKDLARLeAEVEQLEERIAQLSKELTELEAE 762
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 1036 SESLKSQLAVSQAKVQNLEDVLQNVNLQMAEIESDLQVTRQEKEALKQEVMSLHRQLQNAIDKDWVSETAPHLSGLRGQQ 1115
Cdd:TIGR02168 763 IEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLED 842
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 1116 RRLSWDKldhlMNEEPQLLCQESKRLQTVVQNTQADLTHSREKVRQLESNLLPTKHQKQlNQPCTVKSTEQEKLTLKREC 1195
Cdd:TIGR02168 843 LEEQIEE----LSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELE-ELSEELRELESKRSELRREL 917
|
810 820 830 840
....*....|....*....|....*....|....*....|....*..
gi 568978938 1196 EQSQKEqsptsrkvgqmgslergLETIHLENEGLKKKQVRLDEKLME 1242
Cdd:TIGR02168 918 EELREK-----------------LAQLELRLEGLEVRIDNLQERLSE 947
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
664-1007 |
3.10e-07 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 55.03 E-value: 3.10e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 664 TLEKRVSELRSEIADLEGQaavlreahhKASCRHEEEKRQLQMAfDEEKAQLQEELRQEHERelQARLQQAAESFRQERE 743
Cdd:TIGR04523 285 ELEKQLNQLKSEISDLNNQ---------KEQDWNKELKSELKNQ-EKKLEEIQNQISQNNKI--ISQLNEQISQLKKELT 352
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 744 GLAQAAWT-----EEKVRGLE------QSYQEQLLSLEEK---------HALEKEELREELSEHHRRELQEGRYESEKLQ 803
Cdd:TIGR04523 353 NSESENSEkqrelEEKQNEIEklkkenQSYKQEIKNLESQindleskiqNQEKLNQQKDEQIKKLQQEKELLEKEIERLK 432
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 804 EENSILRNEITTLNEEDSISNLKLEELNGSQEELWQKIETIEQEKASIQTMVEKLKKQvsdLKIKNQQLDseniELSQKN 883
Cdd:TIGR04523 433 ETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKE---LKSKEKELK----KLNEEK 505
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 884 SQNKEELKTLNQRLAEMLCQREEPGACTSEKwEQENASLKEELDhyKVQTSTLVSSLEAELSEVKLQTHVMEQENLLLKD 963
Cdd:TIGR04523 506 KELEEKVKDLTKKISSLKEKIEKLESEKKEK-ESKISDLEDELN--KDDFELKKENLEKEIDEKNKEIEELKQTQKSLKK 582
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 568978938 964 ELERLKQLhrcpdLSDFQQKMSSILSYNEKLLKEKEVLSEELKS 1007
Cdd:TIGR04523 583 KQEEKQEL-----IDQKEKEKKDLIKEIEEKEKKISSLEKELEK 621
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
361-869 |
5.51e-07 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 54.28 E-value: 5.51e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 361 ALASFKAEIRHLLERVDQVVREKEKLRSDLDKAEKLKSLMASEVDDHHAAIERRNEYNLR-----KLDEEYKERIAALKN 435
Cdd:PRK02224 238 EADEVLEEHEERREELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDllaeaGLDDADAEAVEARRE 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 436 ELRQEREQMLQQVGKQRV---ELEQEIQKAKTEENYIRDRLALSLKENNRLETELLENAEKLAEYESLTQKLQRSLENvL 512
Cdd:PRK02224 318 ELEDRDEELRDRLEECRVaaqAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEE-L 396
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 513 AEKFGDL--DPSSAEFFLQE-----ERLAQMRNEYEQQCRLLQDQVDELQSELEEYQAQ--GRvlrlPLKNSlseeldGH 583
Cdd:PRK02224 397 RERFGDApvDLGNAEDFLEElreerDELREREAELEATLRTARERVEEAEALLEAGKCPecGQ----PVEGS------PH 466
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 584 SGGIEPDQGPGSEecnplnmsIEAELviEQMKEQhhRDLCHLRLELEDKVRHYEKQLDDTRVASEQEQAAMKQKyEQGVH 663
Cdd:PRK02224 467 VETIEEDRERVEE--------LEAEL--EDLEEE--VEEVEERLERAEDLVEAEDRIERLEERREDLEELIAER-RETIE 533
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 664 TLEKRVSELRSEIADLEGQAAVLREAHHKASCRHEEEKRQLQmAFDEEKAQLQEEL-RQEHERELQARLQQAAESFRQER 742
Cdd:PRK02224 534 EKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVA-ELNSKLAELKERIeSLERIRTLLAAIADAEDEIERLR 612
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 743 EGLAQAAWTEEKVRGLEQSYQEQLLSLEEKH-------ALEKEELREELSEHHRRELQEGRYESEKLQEENSILRNEITT 815
Cdd:PRK02224 613 EKREALAELNDERRERLAEKRERKRELEAEFdearieeAREDKERAEEYLEQVEEKLDELREERDDLQAEIGAVENELEE 692
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....
gi 568978938 816 LNEedsisnlkLEELNGSQEELWQKIETIEQEKASIQTMVEKLKkqvSDLKIKN 869
Cdd:PRK02224 693 LEE--------LRERREALENRVEALEALYDEAEELESMYGDLR---AELRQRN 735
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
811-1240 |
1.19e-06 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 53.10 E-value: 1.19e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 811 NEITTLNEEDSISNLKLEELNGSQEELWQKIETIEQEKASIQTMVEKLKKQ-------VSDLKIKNQ---QLDSENIELS 880
Cdd:TIGR04523 145 TEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKllklellLSNLKKKIQknkSLESQISELK 224
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 881 QKNSQNKEELKTLNQRLAEM---LCQREEPGACTSEKWEQENASLKEELDHYKvQTSTLVSSLEAELSEVKLQTHVMEQE 957
Cdd:TIGR04523 225 KQNNQLKDNIEKKQQEINEKtteISNTQTQLNQLKDEQNKIKKQLSEKQKELE-QNNKKIKELEKQLNQLKSEISDLNNQ 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 958 -----NLLLKDELERLKQLHRC--PDLSDFQQKMSSILSYNEKLLKEKEVLSEELKSCADKLAESsllEHRIATMKQEQT 1030
Cdd:TIGR04523 304 keqdwNKELKSELKNQEKKLEEiqNQISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEK---QNEIEKLKKENQ 380
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 1031 AWEEQSESLKSQLAVSQAKVQNLEDVLQNVNLQMAEIESDLQVTRQEKEALKQEVMSLHRQLQNAIDKDWVSETAPHLSG 1110
Cdd:TIGR04523 381 SYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLD 460
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 1111 LRGQQRRLSWDKLDHLMNEEPQLLCQESKRLQTVVQntqaDLTHSREKVRQLESNLlptkhqKQLNQPCTVKSTEQEKLT 1190
Cdd:TIGR04523 461 NTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEK----ELKKLNEEKKELEEKV------KDLTKKISSLKEKIEKLE 530
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 568978938 1191 ---LKRECEQSQKEQSPTSRKVG--------QMGSLERGLETIHLENEGLKKKQVRLDEKL 1240
Cdd:TIGR04523 531 sekKEKESKISDLEDELNKDDFElkkenlekEIDEKNKEIEELKQTQKSLKKKQEEKQELI 591
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
800-1093 |
1.68e-06 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 52.98 E-value: 1.68e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 800 EKLQEENSILR-----NEITTLNEED--SISNLKLEELNGSQEELWQKIETIEQEkASIQ-----TMVEKLKKQVSDL-K 866
Cdd:PLN02939 71 ENGQLENTSLRtvmelPQKSTSSDDDhnRASMQRDEAIAAIDNEQQTNSKDGEQL-SDFQledlvGMIQNAEKNILLLnQ 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 867 IKNQQLDSENIELSQKNSQNKEeLKTLNQRLAEMLCQRE--EPGACTSEKWEQENASLKEELDHYKVQTSTLVSSLEAEL 944
Cdd:PLN02939 150 ARLQALEDLEKILTEKEALQGK-INILEMRLSETDARIKlaAQEKIHVEILEEQLEKLRNELLIRGATEGLCVHSLSKEL 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 945 SEVKLqthvmeqENLLLKDELERLKQlhrcpDLSDFQQKMSSILsyneKLLKEKEVLSEELKSCADKLAESSLLEHRIAT 1024
Cdd:PLN02939 229 DVLKE-------ENMLLKDDIQFLKA-----ELIEVAETEERVF----KLEKERSLLDASLRELESKFIVAQEDVSKLSP 292
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568978938 1025 MKQEqtAWEEQSESLKSQLAVSQAKVQNLEDVL-QNVNL--QMAEIESDLQVTRQEK------EALKQEVMSLHRQLQ 1093
Cdd:PLN02939 293 LQYD--CWWEKVENLQDLLDRATNQVEKAALVLdQNQDLrdKVDKLEASLKEANVSKfssykvELLQQKLKLLEERLQ 368
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
698-1091 |
3.90e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 51.31 E-value: 3.90e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 698 EEEKRQLQMAFDEEKAQLQEELRQEHERELQARLQQAAESFRQEREGLAQAAWTEEKVRGLEQSyQEQLLSLEEKhalek 777
Cdd:COG4717 74 KELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLYQELEAL-EAELAELPER----- 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 778 eelrEELSEHHRRELQEGRYESEKLQEENSILRNEITTLNEEDSISNLK-LEELNGSQEELWQKIETIEQEKASIQTMVE 856
Cdd:COG4717 148 ----LEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEeLQDLAEELEELQQRLAELEEELEEAQEELE 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 857 KLKKQVSDLkiknqQLDSENIELSQKNSQNKEELKTLNQRLA----------------------------EMLCQREEPG 908
Cdd:COG4717 224 ELEEELEQL-----ENELEAAALEERLKEARLLLLIAAALLAllglggsllsliltiagvlflvlgllalLFLLLAREKA 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 909 ACTSEKWEQENASLKEELDHYKVQTSTLVSSLEAELSEVKLQTHVMEQENLllKDELERLKQLHRCPDLSDFQQKMSSIL 988
Cdd:COG4717 299 SLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEEL--QELLREAEELEEELQLEELEQEIAALL 376
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 989 SYNE-----------KLLKEKEVLSEELKSCADKLAESSLLEHRIATMKQEqTAWEEQSESLKSQLAVSQAKVQNLEDVL 1057
Cdd:COG4717 377 AEAGvedeeelraalEQAEEYQELKEELEELEEQLEELLGELEELLEALDE-EELEEELEELEEELEELEEELEELREEL 455
|
410 420 430
....*....|....*....|....*....|....*.
gi 568978938 1058 QNVNLQMAEIESD--LQVTRQEKEALKQEVMSLHRQ 1091
Cdd:COG4717 456 AELEAELEQLEEDgeLAELLQELEELKAELRELAEE 491
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
833-1120 |
6.70e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.15 E-value: 6.70e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 833 SQEELWQKIETIEQEKASIQTMVEKLKKQVSDLKIKNQQLDSENIELSQKNSQNKEELKTLNQRLAEMlcqreepgacts 912
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAEL------------ 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 913 ekwEQENASLKEELDhykvqtstlvsSLEAELSEVKLQTHVMEQENlllkdeleRLKQLHRCPDLSDFQQKMSSILSYNE 992
Cdd:COG4942 89 ---EKEIAELRAELE-----------AQKEELAELLRALYRLGRQP--------PLALLLSPEDFLDAVRRLQYLKYLAP 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 993 KLLKEKEVLSEELKscadklaessllehRIATMKQEQtawEEQSESLKSQLAVSQAKVQNLEDVLQNVNLQMAEIESDLQ 1072
Cdd:COG4942 147 ARREQAEELRADLA--------------ELAALRAEL---EAERAELEALLAELEEERAALEALKAERQKLLARLEKELA 209
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 568978938 1073 VTRQEKEALKQEVMSLHRQLQNAIDKDWVSETAPHLSGLRGQQRRLSW 1120
Cdd:COG4942 210 ELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAGFAALKGKLPW 257
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
368-581 |
7.07e-06 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 50.70 E-value: 7.07e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 368 EIRHLLERVDQVVREKEKLRSDLDKAEKLKSLMASEVDDHHAAIERRNEYNLRKLDEEYKERIAALkNELRQEREQMLQQ 447
Cdd:PRK05771 44 RLRKLRSLLTKLSEALDKLRSYLPKLNPLREEKKKVSVKSLEELIKDVEEELEKIEKEIKELEEEI-SELENEIKELEQE 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 448 vgKQRVE----LEQEIQKAKTEENYIrdRLALSLKENNRLETELLENAEKLAEYESLTQKL------QRSLENVLAEKFG 517
Cdd:PRK05771 123 --IERLEpwgnFDLDLSLLLGFKYVS--VFVGTVPEDKLEELKLESDVENVEYISTDKGYVyvvvvvLKELSDEVEEELK 198
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 568978938 518 DLDPSSAEFFlQEERLAQMRNEYEQQCRLLQDQVDELQSELEEYQAQGRVLRLPLKNSLSEELD 581
Cdd:PRK05771 199 KLGFERLELE-EEGTPSELIREIKEELEEIEKERESLLEELKELAKKYLEELLALYEYLEIELE 261
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
606-816 |
7.37e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 50.68 E-value: 7.37e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 606 EAELVIEQMKE--QHHRDLCHLR------LELEDKVRHYEKQLDDTRVASEQEQAAMKQKYEQGVHTLEKRVSELRSEIA 677
Cdd:COG4913 226 AADALVEHFDDleRAHEALEDAReqiellEPIRELAERYAAARERLAELEYLRAALRLWFAQRRLELLEAELEELRAELA 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 678 DLEGQAAVLREAHHKASCRHEEEKRQLQMAFDEEKAQLQEELRQEhERELQaRLQQAAESFRQEREGL-AQAAWTEEKVR 756
Cdd:COG4913 306 RLEAELERLEARLDALREELDELEAQIRGNGGDRLEQLEREIERL-ERELE-ERERRRARLEALLAALgLPLPASAEEFA 383
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 757 GLEQSYQEQLLSLEEKHALekeelreelsehHRRELQEGRYESEKLQEENSILRNEITTL 816
Cdd:COG4913 384 ALRAEAAALLEALEEELEA------------LEEALAEAEAALRDLRRELRELEAEIASL 431
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
307-505 |
1.73e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 49.24 E-value: 1.73e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 307 VERILDTWQEEGIE-NSQEILKALDFsLDGNINLTELTL-ALENELLVTKNgihQAALASFKAEIRHLLERVDQVVREKE 384
Cdd:COG3206 154 ANALAEAYLEQNLElRREEARKALEF-LEEQLPELRKELeEAEAALEEFRQ---KNGLVDLSEEAKLLLQQLSELESQLA 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 385 KLRSDLDKAE----------KLKSLMASEVDDHHAAIERRNEYN-----LRKLDEEYKE---RIAALKNELRQEREQMLQ 446
Cdd:COG3206 230 EARAELAEAEarlaalraqlGSGPDALPELLQSPVIQQLRAQLAeleaeLAELSARYTPnhpDVIALRAQIAALRAQLQQ 309
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 568978938 447 QVGKQRVELEQEIQKAKTEENYIRDRLAlslkennRLETELLENAEKLAEYESLTQKLQ 505
Cdd:COG3206 310 EAQRILASLEAELEALQAREASLQAQLA-------QLEARLAELPELEAELRRLEREVE 361
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
424-971 |
1.91e-05 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 49.27 E-value: 1.91e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 424 EEYKERIAALKNELRQEREqmlqqvGKQRVELEQEIQKAKTEENYIRDRLalslkenNRLETELLENAEKLAEYESLTQK 503
Cdd:PRK02224 165 EEYRERASDARLGVERVLS------DQRGSLDQLKAQIEEKEEKDLHERL-------NGLESELAELDEEIERYEEQREQ 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 504 LQRSLEN---VLAEkfgdldpssaefflQEERLAQMrNEYEQQCRLLQDQVDELQSELEEYQAQGRVLRLPLKnSLSEEL 580
Cdd:PRK02224 232 ARETRDEadeVLEE--------------HEERREEL-ETLEAEIEDLRETIAETEREREELAEEVRDLRERLE-ELEEER 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 581 DGHSGGIEPDqgpgseecnplnmSIEAELVIEQmkeqhhrdlchlRLELEDKVRHYEKQLDDTRVASEQ--EQAamkQKY 658
Cdd:PRK02224 296 DDLLAEAGLD-------------DADAEAVEAR------------REELEDRDEELRDRLEECRVAAQAhnEEA---ESL 347
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 659 EQGVHTLEKRVSELRSEIADLEGQAAVLREAHHKASCRHEE---EKRQLQMAFD------EEKAQLQEELRQEHER---- 725
Cdd:PRK02224 348 REDADDLEERAEELREEAAELESELEEAREAVEDRREEIEEleeEIEELRERFGdapvdlGNAEDFLEELREERDElrer 427
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 726 --ELQARLQQAAESFRQEREGLA--------QAAWTEEKVRGLEQsYQEQLLSLEEKHALEKEELREELSEHHR-RELQE 794
Cdd:PRK02224 428 eaELEATLRTARERVEEAEALLEagkcpecgQPVEGSPHVETIEE-DRERVEELEAELEDLEEEVEEVEERLERaEDLVE 506
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 795 GRYESEKLQEENSILRNEITTLNEEDSISNLKLEELNGSQEELWQKIETIEQEKASIQTMVEKLKKQVSDLKIKNQQLDS 874
Cdd:PRK02224 507 AEDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKE 586
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 875 E-----NIELSQKNSQNKE-ELKTLNQR---LAEMLCQREEPGACTSEKWEQENASLK----EELDHYKVQTSTLVSSLE 941
Cdd:PRK02224 587 RiesleRIRTLLAAIADAEdEIERLREKreaLAELNDERRERLAEKRERKRELEAEFDeariEEAREDKERAEEYLEQVE 666
|
570 580 590
....*....|....*....|....*....|
gi 568978938 942 AELSEVKLQTHVMEQENLLLKDELERLKQL 971
Cdd:PRK02224 667 EKLDELREERDDLQAEIGAVENELEELEEL 696
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
667-1166 |
4.39e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 48.37 E-value: 4.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 667 KRVSELRSEIADLEGQAAVL----------REAHHKAScRHEEEKRQLQMAFDEEKAQLQEELRQEHERELQaRLQQAAE 736
Cdd:COG4913 235 DDLERAHEALEDAREQIELLepirelaeryAAARERLA-ELEYLRAALRLWFAQRRLELLEAELEELRAELA-RLEAELE 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 737 SFRQEREGLaqaawtEEKVRGLEQSYQE----QLLSLEekhalekeelreelsehhrRELQEGRYESEKLQEENSILRNE 812
Cdd:COG4913 313 RLEARLDAL------REELDELEAQIRGnggdRLEQLE-------------------REIERLERELEERERRRARLEAL 367
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 813 ITTLNEEDSISNLKLEELngsQEELWQKIETIEQEKASIQTMVEKLKKQVSDLKIKNQQLDSENIELSQKNSQNKEELKT 892
Cdd:COG4913 368 LAALGLPLPASAEEFAAL---RAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSNIPARLLA 444
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 893 LNQRLAEMLCQREE--PGAC-------TSEKWEQ---------------------------ENASLKEELDHYKVQTST- 935
Cdd:COG4913 445 LRDALAEALGLDEAelPFVGelievrpEEERWRGaiervlggfaltllvppehyaaalrwvNRLHLRGRLVYERVRTGLp 524
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 936 ---LVSSLEAELSEvKLQTHVMEQENLLlKDELERLKQLHRCPDLSDFQQKMSSI----LSYNEKLLKEK---------- 998
Cdd:COG4913 525 dpeRPRLDPDSLAG-KLDFKPHPFRAWL-EAELGRRFDYVCVDSPEELRRHPRAItragQVKGNGTRHEKddrrrirsry 602
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 999 ----------EVLSEELKSCADKLAEsslLEHRIATMKQEQTAWEEQSESLKSQLAVS---------QAKVQNLEDVLQN 1059
Cdd:COG4913 603 vlgfdnraklAALEAELAELEEELAE---AEERLEALEAELDALQERREALQRLAEYSwdeidvasaEREIAELEAELER 679
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 1060 VNL----------QMAEIESDLQVTRQEKEALKQEVMSLHRQLQNAidKDWVSETAPHLSGLRGQQRRLSWDKLDHLMNE 1129
Cdd:COG4913 680 LDAssddlaaleeQLEELEAELEELEEELDELKGEIGRLEKELEQA--EEELDELQDRLEAAEDLARLELRALLEERFAA 757
|
570 580 590
....*....|....*....|....*....|....*..
gi 568978938 1130 EPQllcqeSKRLQTVVQNTQADLTHSREKVRQLESNL 1166
Cdd:COG4913 758 ALG-----DAVERELRENLEERIDALRARLNRAEEEL 789
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
631-864 |
4.66e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.45 E-value: 4.66e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 631 DKVRHYEKQLDDTRVASEQEQAAMKQ------KYEQGVHTLEKRVSELRSEIADLEGQAAVLREAHHKAscrhEEEKRQL 704
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAAlkkeekALLKQLAALERRIAALARRIRALEQELAALEAELAEL----EKEIAEL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 705 QMAFDEEKAQLQEELRQehereLQARLQQAAESFRQEREGLAQAAWTEEKVRGLEQSYQEQLLSLEEKHALEKEElreel 784
Cdd:COG4942 96 RAELEAQKEELAELLRA-----LYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAAL----- 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 785 sehhRRELQEGRYESEKLQEEnsiLRNEITTLNEEDSISNLKLEELNGSQEELWQKIETIEQEKASIQTMVEKLKKQVSD 864
Cdd:COG4942 166 ----RAELEAERAELEALLAE---LEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAA 238
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
442-1124 |
5.37e-05 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 47.91 E-value: 5.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 442 EQMLQQVGKQRVELEQEIQKAKTE-ENYIRDRLALSLKENNRLETELLENAEKlaEYESLTQKLQRSlenvlaeKFGDLD 520
Cdd:pfam12128 199 KSMIVAILEDDGVVPPKSRLNRQQvEHWIRDIQAIAGIMKIRPEFTKLQQEFN--TLESAELRLSHL-------HFGYKS 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 521 PSSAEFFLQEERlAQMRNEYEQQCRLLQDQVDELQSELEE---------YQAQGRVLRLPLKNSLSEELDGHSGGIEPDQ 591
Cdd:pfam12128 270 DETLIASRQEER-QETSAELNQLLRTLDDQWKEKRDELNGelsaadaavAKDRSELEALEDQHGAFLDADIETAAADQEQ 348
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 592 GPG-SEECNPLNMSIEAEL-VIEQMKEQHHRDLCHLRLELEDKVRHYEKQLDDTRvaseqeqaamkqkyeqgvhtlEKRV 669
Cdd:pfam12128 349 LPSwQSELENLEERLKALTgKHQDVTAKYNRRRSKIKEQNNRDIAGIKDKLAKIR---------------------EARD 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 670 SELRSEIADLEGQAAVLREAHHKASCRHEEEKRQLQMAFDEEKAQL-------QEELRQEHERELQARLQQAAESFRQER 742
Cdd:pfam12128 408 RQLAVAEDDLQALESELREQLEAGKLEFNEEEYRLKSRLGELKLRLnqatatpELLLQLENFDERIERAREEQEAANAEV 487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 743 EGLAQAAWTEEKVR--GLEQSYQEQLLSLEEKHALEKEELREELSEHH-----RRELQEGRYESEKLQEENSILRNEITT 815
Cdd:pfam12128 488 ERLQSELRQARKRRdqASEALRQASRRLEERQSALDELELQLFPQAGTllhflRKEAPDWEQSIGKVISPELLHRTDLDP 567
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 816 LNEEDSIS--------NLKLEELN-----GSQEELWQKIETIEQekaSIQTMVEKLKKQVSDLKIKNQQLDSENIELSQK 882
Cdd:pfam12128 568 EVWDGSVGgelnlygvKLDLKRIDvpewaASEEELRERLDKAEE---ALQSAREKQAAAEEQLVQANGELEKASREETFA 644
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 883 NSQNKEELKTLNQRLAEMlcqreepgactsekwEQENASLKEELDHYKVQTSTLVSSLEAELSEVKLQTHVMEQENLLLK 962
Cdd:pfam12128 645 RTALKNARLDLRRLFDEK---------------QSEKDKKNKALAERKDSANERLNSLEAQLKQLDKKHQAWLEEQKEQK 709
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 963 DELERLKQLHRCPDLSDFQQKMSSIlsyNEKLLKEKEVLSEELKSC----ADKLAESSLLEHRIATMKQEQTAWEEQSEs 1038
Cdd:pfam12128 710 REARTEKQAYWQVVEGALDAQLALL---KAAIAARRSGAKAELKALetwyKRDLASLGVDPDVIAKLKREIRTLERKIE- 785
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 1039 lksQLAVSQAKVQNLEDVLQ--------NVNLQMAEIESDLQVTRQEKEALKQEVMSLHRQLQNAID--KDWVSETAPHL 1108
Cdd:pfam12128 786 ---RIAVRRQEVLRYFDWYQetwlqrrpRLATQLSNIERAISELQQQLARLIADTKLRRAKLEMERKasEKQQVRLSENL 862
|
730
....*....|....*.
gi 568978938 1109 SGLRGQQRRLSWDKLD 1124
Cdd:pfam12128 863 RGLRCEMSKLATLKED 878
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
425-1248 |
5.91e-05 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 47.66 E-value: 5.91e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 425 EYKERIAALKNELRQEREQMLQQVGKQRVELEQE----IQKAKTEENYirdrlalslkeNNRLETELLENAEKLAEYESL 500
Cdd:pfam02463 166 RLKRKKKEALKKLIEETENLAELIIDLEELKLQElklkEQAKKALEYY-----------QLKEKLELEEEYLLYLDYLKL 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 501 TQKLQRSLENVLAEKFGDLDPSSAEFFLQEERLAQMRNEYEQQCRLLQDQ--VDELQSELEEYQAQGRVLRLPLKNSLSE 578
Cdd:pfam02463 235 NEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQeeELKLLAKEEEELKSELLKLERRKVDDEE 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 579 ELDGHsggiepdqgpgseECNPLNMSIEAELVIEQMKEQHHRDLCHLRLELEDKVRHYEKQLDDTRVASEQEQAAMKQKY 658
Cdd:pfam02463 315 KLKES-------------EKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKL 381
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 659 EQGVHTLEKRVSELRSEIADLEGQAAVLREAHHKASCRHEEEKRQLQMAFDEEKAQLQEELRQEHERELQARLQQAAESF 738
Cdd:pfam02463 382 ESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLL 461
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 739 RQEREGLAQAAWTEEKVRGLEQSYQEQLLSLEEKHALEKEELREELSEHHRRELQEGRYESEKLQEENSILRNEITTLNE 818
Cdd:pfam02463 462 KDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENY 541
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 819 EDSISNLKLEELNGSQEELWQKIETIEQEKASIQTMveKLKKQVSDLKIKNQQLDSENIELSQKNSQNKEELKTLNQRLA 898
Cdd:pfam02463 542 KVAISTAVIVEVSATADEVEERQKLVRALTELPLGA--RKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDD 619
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 899 EMLCQREEPGACTSEKWEQENASLKEELDHYKVQTS---TLVSSLEAELSEVKLQTHVMEQENLLLKDELERLKQLHRCP 975
Cdd:pfam02463 620 KRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEeglAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQL 699
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 976 DLSDFQQKMSSILsynEKLLKEKEVLSEELKSCADKLA--ESSLLEHRIATMKQEQTAWEEQSESLKSQLAVSQAKVQNL 1053
Cdd:pfam02463 700 EIKKKEQREKEEL---KKLKLEAEELLADRVQEAQDKIneELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKEL 776
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 1054 EDVLQNVNLQMAEIESDLQVTRQEKEALKQEVMSLHRQLQNAIDKdwvsetaphLSGLRGQQRRLSWDKLDHLMNEEPQL 1133
Cdd:pfam02463 777 AEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQ---------LLIEQEEKIKEEELEELALELKEEQK 847
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 1134 LCQESKRLQTVVQNTQADLTHSREKVRQLESNLLPTKHQKQLNQPCTVKSTEQEKLTLKRECEQSQKEQSPTSRKVGQMG 1213
Cdd:pfam02463 848 LEKLAEEELERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEA 927
|
810 820 830
....*....|....*....|....*....|....*
gi 568978938 1214 SLERGLETIHLENEGLKKKQVRLDEKLMEMQPLRS 1248
Cdd:pfam02463 928 EILLKYEEEPEELLLEEADEKEKEENNKEEEEERN 962
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
359-560 |
6.43e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.07 E-value: 6.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 359 QAALASFKAEIRHLLERVDQVVREKEKLRSDLDKAEKLKSLMASEVDDHHAAIERRNEyNLRKLdeeyKERIAALKNELR 438
Cdd:COG4942 26 EAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEA-ELAEL----EKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 439 QEREQMLQQVGKQ-----------------------RVELEQEIQKAKTEEnyiRDRLALSLKENNRLETELLENAEKLA 495
Cdd:COG4942 101 AQKEELAELLRALyrlgrqpplalllspedfldavrRLQYLKYLAPARREQ---AEELRADLAELAALRAELEAERAELE 177
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568978938 496 EYESLTQKLQRSLENVLAEKFGDLDPSSAEFFLQEERLAQMRNEYEQqcrlLQDQVDELQSELEE 560
Cdd:COG4942 178 ALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEE----LEALIARLEAEAAA 238
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
710-1379 |
8.34e-05 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 47.27 E-value: 8.34e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 710 EEKAQLQEELRQEHERELQARLQQAAESFRQEREGLAQAAWTEEKVRGLEQSYQEQLlsleekhalekeelreelseHHR 789
Cdd:TIGR00618 200 TLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYLTQKREAQEEQL--------------------KKQ 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 790 RELQEGRYESEKLQEENSILRNEITTLNEEDSISNL-----KLEELNGSQEELWQKIETIEQEKASIQTMVEKLKKQVSD 864
Cdd:TIGR00618 260 QLLKQLRARIEELRAQEAVLEETQERINRARKAAPLaahikAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSS 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 865 LKIKN---QQLDSENIELSQKNSQ------NKEELKTLNQRLAEMLCQREepgacTSEKWEQENASLKEELDHYKVQTST 935
Cdd:TIGR00618 340 IEEQRrllQTLHSQEIHIRDAHEVatsireISCQQHTLTQHIHTLQQQKT-----TLTQKLQSLCKELDILQREQATIDT 414
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 936 LVSS-------LEAELSEVKLQTHVMEQENLLLKDELERLKQLHRcpdlsdFQQKMSSILSYNEKLLKEKEVLSEELKSC 1008
Cdd:TIGR00618 415 RTSAfrdlqgqLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKI------HLQESAQSLKEREQQLQTKEQIHLQETRK 488
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 1009 ADKLAESSLLEHRIATMKQEQTAWEEQSESLKSQLAVSQAKVQNLEDVLQNVNLQMAEIESDLQVTRQEKEALKQEVMSL 1088
Cdd:TIGR00618 489 KAVVLARLLELQEEPCPLCGSCIHPNPARQDIDNPGPLTRRMQRGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEI 568
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 1089 HRQLQNAIDKDwvSETAPHLSGLRGQQRRLSwDKLDHLMNEEPQLLCqESKRLQTVVQNTQADLTHSRE--KVRQLESNL 1166
Cdd:TIGR00618 569 QQSFSILTQCD--NRSKEDIPNLQNITVRLQ-DLTEKLSEAEDMLAC-EQHALLRKLQPEQDLQDVRLHlqQCSQELALK 644
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 1167 LPTKHQKQLNQP------CTVKSTEQEKLTLKRECEQSQKEQSPTSRKVGQMGSLERGLETIHLENEGLKKKQVRLDEKL 1240
Cdd:TIGR00618 645 LTALHALQLTLTqervreHALSIRVLPKELLASRQLALQKMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREFNEIE 724
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 1241 MEMQPLRSTVTRSPSSHWDLQ--LLQQQACPMVPREQFLQLQQQLLQAE----KRSQHLQEELENRTSETNTPQGNQEHL 1314
Cdd:TIGR00618 725 NASSSLGSDLAAREDALNQSLkeLMHQARTVLKARTEAHFNNNEEVTAAlqtgAELSHLAAEIQFFNRLREEDTHLLKTL 804
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568978938 1315 VNLMEERMIEVEQKLKLVKRLLQEKVNQLKEQLCKNTKTDAVVKDLYVENAQLLKALEMTEQRQK 1379
Cdd:TIGR00618 805 EAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLGEITHQLLKYEECSKQLAQLTQEQA 869
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
612-1361 |
8.69e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 47.44 E-value: 8.69e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 612 EQMKEQHHRDLCHLRLELEDKVRHYEKQLDDTRVASEQEQAAMKQKYEQGVHTLEKRVSELRSEIADlegqaavlreahh 691
Cdd:PTZ00121 1096 AFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEARKAEDAKRVEIARKAED------------- 1162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 692 kasCRHEEEKRQLQMAFDEEKAQLQEELRQEHERELQARLQQAAESFRQEREGLAQAAWTEEKVRGLE--------QSYQ 763
Cdd:PTZ00121 1163 ---ARKAEEARKAEDAKKAEAARKAEEVRKAEELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEavkkaeeaKKDA 1239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 764 EQLLSLEEKHALEKEELREELSEHHRRELQEGRYESEKLQEENSILRNEITTLNE-EDSISNLKLEELNGSQEELwQKIE 842
Cdd:PTZ00121 1240 EEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEaKKAEEKKKADEAKKKAEEA-KKAD 1318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 843 TIEQEKASIQTMVEKLKKQVSDLKIKNQQLDSENIELSQKNSQNKEELKTLNQRLAEMLCQREEPGACTSEKWEQENASL 922
Cdd:PTZ00121 1319 EAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKK 1398
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 923 KEELDHYKVQTSTLVSSLEAELSEVKLQTHVMEQENLLLKDELERLKqlhrcpdlSDFQQKMSSILSYNEKLLK--EKEV 1000
Cdd:PTZ00121 1399 KAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKK--------ADEAKKKAEEAKKAEEAKKkaEEAK 1470
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 1001 LSEELKSCADKLAESSLLEHRIATMKQEQTAWEEQSESLKSQLAVSQAkvqnlEDVLQNVNLQMAEIESDLQVTRQEKEA 1080
Cdd:PTZ00121 1471 KADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKA-----EEAKKADEAKKAEEAKKADEAKKAEEK 1545
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 1081 LKQEVMSLHRQLQNAIDKDWVSETAphlsglRGQQRRLSWDKLDHLMNEEPQLLCQESKRLQTVVQNTQADLTHSREKVR 1160
Cdd:PTZ00121 1546 KKADELKKAEELKKAEEKKKAEEAK------KAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAK 1619
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 1161 QLESNLLPTKHQKQLNQPCTVKSTEQekltlKRECEQSQKEQSPTSRKVGQMGSLE----RGLETIHLENEGLKKKQVRL 1236
Cdd:PTZ00121 1620 IKAEELKKAEEEKKKVEQLKKKEAEE-----KKKAEELKKAEEENKIKAAEEAKKAeedkKKAEEAKKAEEDEKKAAEAL 1694
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 1237 DEKLMEMQPLRstvtrspsshwdlQLLQQQACPMVPREQFLQLQQQLLQAEKRSQHLQEELENRTSETNTPQGNQEHLVN 1316
Cdd:PTZ00121 1695 KKEAEEAKKAE-------------ELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAH 1761
|
730 740 750 760
....*....|....*....|....*....|....*....|....*
gi 568978938 1317 LMEERMIEVEQKLKLVKRLLQEKVNqlKEQLCKNTKTDAVVKDLY 1361
Cdd:PTZ00121 1762 LKKEEEKKAEEIRKEKEAVIEEELD--EEDEKRRMEVDKKIKDIF 1804
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
523-1099 |
1.06e-04 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 46.89 E-value: 1.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 523 SAEFFLQEERLAQMRNEYEQQCRLLQDQVDELQSELE----------------------------EYQAQGRVLRLPLKN 574
Cdd:TIGR00618 241 SHAYLTQKREAQEEQLKKQQLLKQLRARIEELRAQEAvleetqerinrarkaaplaahikavtqiEQQAQRIHTELQSKM 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 575 SLSEELDGHSGGIEPDQGPGSEECNPLNMSIEAELVIEQMKEQHHRDLCHLRLELEDKvRHYEKQLDDTRVASEQEQ--A 652
Cdd:TIGR00618 321 RSRAKLLMKRAAHVKQQSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLT-QHIHTLQQQKTTLTQKLQslC 399
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 653 AMKQKYEQGVHTLEKRVSELRSEIADLegqaavlreAHHKASCRHEEEKRQLQMAFDEEKAQLQeELRQEHERELQARLQ 732
Cdd:TIGR00618 400 KELDILQREQATIDTRTSAFRDLQGQL---------AHAKKQQELQQRYAELCAAAITCTAQCE-KLEKIHLQESAQSLK 469
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 733 QAAESFRQEREGLAQAA--WTEEKVRGLEQSYQEQLLSLEEKHALEKEELREELSEHHRReLQEGRYESEKLQEENSILR 810
Cdd:TIGR00618 470 EREQQLQTKEQIHLQETrkKAVVLARLLELQEEPCPLCGSCIHPNPARQDIDNPGPLTRR-MQRGEQTYAQLETSEEDVY 548
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 811 NEITTLNEEDSISNLKLEELNGSQEELWQKIETIEQEKASIQTMVEKLKKQV-SDLKIKNQQLDSENIELSQKNsqnkEE 889
Cdd:TIGR00618 549 HQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTeKLSEAEDMLACEQHALLRKLQ----PE 624
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 890 LKTLNQRLAEMLCQREEPGACTSEKWEQENASLKEELDHykvqtSTLVSSLEAELSEVKlqthvmeqENLLLKDELERLK 969
Cdd:TIGR00618 625 QDLQDVRLHLQQCSQELALKLTALHALQLTLTQERVREH-----ALSIRVLPKELLASR--------QLALQKMQSEKEQ 691
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 970 QLHRCPDLSDFQQKMSSILSYNEKLLKEKEVLSEELKScadklaESSLLEHRIATMKQEQTAWEEQSESLKSQLAVSQAK 1049
Cdd:TIGR00618 692 LTYWKEMLAQCQTLLRELETHIEEYDREFNEIENASSS------LGSDLAAREDALNQSLKELMHQARTVLKARTEAHFN 765
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|
gi 568978938 1050 VQNLEDVLQNVNLQMAEIESDLQVTRQEKEALKQEVMSLHRQLQNAIDKD 1099
Cdd:TIGR00618 766 NNEEVTAALQTGAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSD 815
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1018-1256 |
1.12e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 46.30 E-value: 1.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 1018 LEHRIATMKQEQTAWEEQSESLKSQLAVSQAKVQNLEDVLQNVNLQMAEIESDLQVTRQEKEALKQEVMSLHRQLQNAID 1097
Cdd:COG4942 32 LQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELAELLR 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 1098 KDWVSETAPHLSGLrgqqrrlswdkldhLMNEEPQLLCQESKRLQTVVQNTQADLTHSREKVRQLEsnllpTKHQKQLNQ 1177
Cdd:COG4942 112 ALYRLGRQPPLALL--------------LSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELA-----ALRAELEAE 172
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568978938 1178 PCTVKSTEQEKLTLKRECEQSQKEQSPTSRKvgqmgsLERGLETIHLENEGLKKKQVRLDEKLMEMQPLRSTVTRSPSS 1256
Cdd:COG4942 173 RAELEALLAELEEERAALEALKAERQKLLAR------LEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPA 245
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
789-1105 |
1.63e-04 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 45.66 E-value: 1.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 789 RRELQEGRYESEKLQEENSILRNEITTLNEEDSISNLKLEELNGSQEELWQKIETIEQEKASIQTMVEKLKKQVSDLKIK 868
Cdd:COG4372 51 REELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQEEAEELQEELEELQKERQDLEQQ 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 869 NQQLDSENIELSQKNSQNKEELKTLNQRLAEMlcqREEPGACTSEKWEQENASLKEELDHYKVQTSTLVSSLEAELSEVK 948
Cdd:COG4372 131 RKQLEAQIAELQSEIAEREEELKELEEQLESL---QEELAALEQELQALSEAEAEQALDELLKEANRNAEKEEELAEAEK 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 949 LQthvmEQENLLLKDELERLKQLHRCPDLSDFQQKMSSILSYNEKLLKEKEVLSEELKSCADKLAESSLLEHRIATMKQE 1028
Cdd:COG4372 208 LI----ESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEELELAILVEKDTEEEELEIAAL 283
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568978938 1029 QTAWEEQSESLKSQLAVSQAKVQNLEDVLQNVNLQMAEIESDLQVTRQEKEALKQEVMSLHRQLQNAIDKDWVSETA 1105
Cdd:COG4372 284 ELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLELALAILLAELADLLQLLLVGLLDNDVLELLS 360
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
438-1005 |
1.90e-04 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 45.94 E-value: 1.90e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 438 RQEREQMLQQVGKQRVELEQeiQKAKTEENYIRDRLALSLKENNRLETELLENAEKLAEYESLTQKL---QRSLENVLAE 514
Cdd:pfam01576 2 RQEEEMQAKEEELQKVKERQ--QKAESELKELEKKHQQLCEEKNALQEQLQAETELCAEAEEMRARLaarKQELEEILHE 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 515 KFGDLDPssaefflQEERLAQMRNEYEQqcrlLQDQVDELQSELEEYQAQGRVLRLPlKNSLSEELDGHSGGI---EPDQ 591
Cdd:pfam01576 80 LESRLEE-------EEERSQQLQNEKKK----MQQHIQDLEEQLDEEEAARQKLQLE-KVTTEAKIKKLEEDIlllEDQN 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 592 GPGSEECNPLNMSIEAELVIEQMKEQHHRDLCHLRL-------ELEDKVRHYEKqlddtrvaSEQEQAAMKQKYEQGVHT 664
Cdd:pfam01576 148 SKLSKERKLLEERISEFTSNLAEEEEKAKSLSKLKNkheamisDLEERLKKEEK--------GRQELEKAKRKLEGESTD 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 665 LEKRVSELRSEIADLEGQAAVLREAHHKASCRHEEE---KRQLQMAFDEEKAQLQEeLRQEHERELQAR---------LQ 732
Cdd:pfam01576 220 LQEQIAELQAQIAELRAQLAKKEEELQAALARLEEEtaqKNNALKKIRELEAQISE-LQEDLESERAARnkaekqrrdLG 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 733 QAAESFRQEREGLAQAAWTEEKVRGLEQSYQEQLLSLEEKHALEKEELREELSEHHRRELQEGRYESEK----------- 801
Cdd:pfam01576 299 EELEALKTELEDTLDTTAAQQELRSKREQEVTELKKALEEETRSHEAQLQEMRQKHTQALEELTEQLEQakrnkanleka 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 802 ---LQEENSILRNEITTLNEEDSISNLKLEELNGSQEELWQKIETIEQEKASIQTMVEKLKKQVSDLKIKNQQLDSENIE 878
Cdd:pfam01576 379 kqaLESENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQARLSESERQRAELAEKLSKLQSELESVSSLLNEAEGKNIK 458
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 879 LSQKNSQNKEELKTLNQRLAEMLCQREEPGAcTSEKWEQENASLKEELDHYKVQTSTL---VSSLEAELSEVKLQthvME 955
Cdd:pfam01576 459 LSKDVSSLESQLQDTQELLQEETRQKLNLST-RLRQLEDERNSLQEQLEEEEEAKRNVerqLSTLQAQLSDMKKK---LE 534
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|
gi 568978938 956 QENLLLKDELERLKQLHRcpDLSDFQQKMSSILSYNEKLLKEKEVLSEEL 1005
Cdd:pfam01576 535 EDAGTLEALEEGKKRLQR--ELEALTQQLEEKAAAYDKLEKTKNRLQQEL 582
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
789-1384 |
2.02e-04 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 46.05 E-value: 2.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 789 RRELQEGRYESEKLQEENSILRNEITTLNEEDSISNLKLEELNGSQEELWQKIETIEQEKASIQTMVEKLKKQVSDLKIK 868
Cdd:PRK01156 151 RKKILDEILEINSLERNYDKLKDVIDMLRAEISNIDYLEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNA 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 869 NQQLDSENIELSQKNSQnKEELKTLNQRLAEMLCQREEPgactsekwEQENASLKE-ELDHYKVQTSTLVSSLEAELSEV 947
Cdd:PRK01156 231 MDDYNNLKSALNELSSL-EDMKNRYESEIKTAESDLSME--------LEKNNYYKElEERHMKIINDPVYKNRNYINDYF 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 948 KLQTHVMEQENLL--LKDELERLKQLHRcpDLSDFQQkmssilSYNEKLLKEKEVlsEELKSCADKLAESSL-------- 1017
Cdd:PRK01156 302 KYKNDIENKKQILsnIDAEINKYHAIIK--KLSVLQK------DYNDYIKKKSRY--DDLNNQILELEGYEMdynsylks 371
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 1018 LEHRIATMKQEQTAWEEQSESLKSQLAVSQAKVQNLEDVLQNVNLQMAEIESDLQVTRQEKEALKQEVMSLHRQLQNAID 1097
Cdd:PRK01156 372 IESLKKKIEEYSKNIERMSAFISEILKIQEIDPDAIKKELNEINVKLQDISSKVSSLNQRIRALRENLDELSRNMEMLNG 451
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 1098 KDWVSETAPHLSGlrgqqrrlswDKLDHLMNEepqlLCQESKRLQTVVQNTQADLTHSREKVRQLESnllptkhqkqlnq 1177
Cdd:PRK01156 452 QSVCPVCGTTLGE----------EKSNHIINH----YNEKKSRLEEKIREIEIEVKDIDEKIVDLKK------------- 504
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 1178 pctvksteqekltLKRECEQSQKEQSPTSRKvgQMGSLERGLETIHLENEGLKKKQVRLDEKLMEMQPLRSTVTRSPSSH 1257
Cdd:PRK01156 505 -------------RKEYLESEEINKSINEYN--KIESARADLEDIKIKINELKDKHDKYEEIKNRYKSLKLEDLDSKRTS 569
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 1258 WDLQLLQQQACPM-VPREQFLQLQQQLLQAEKRSQHLQEELENRTSETNTPQGNQEHLVNLMEERMIEVEQKlKLVKRLL 1336
Cdd:PRK01156 570 WLNALAVISLIDIeTNRSRSNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSIREIENEANNLNNKYNEIQEN-KILIEKL 648
|
570 580 590 600
....*....|....*....|....*....|....*....|....*...
gi 568978938 1337 QEKVNQLKEQLcknTKTDAVVKDLYVENAQLLKalemTEQRQKTAEKR 1384
Cdd:PRK01156 649 RGKIDNYKKQI---AEIDSIIPDLKEITSRIND----IEDNLKKSRKA 689
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
438-749 |
2.86e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 45.71 E-value: 2.86e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 438 RQEREQMLQQVGKQRVELeQEIQKAKTEENYIRDRLALSLKENNRLETELLenaeklAEYESLTQKLQRSLENV-LAEKF 516
Cdd:COG3096 277 ANERRELSERALELRREL-FGARRQLAEEQYRLVEMARELEELSARESDLE------QDYQAASDHLNLVQTALrQQEKI 349
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 517 G--DLDPSSAEFFLQE-----ERLAQMRNEYEQQCRLLQDQVDELQSELEEYQ-----AQGRVL-------RLPLKNSLS 577
Cdd:COG3096 350 EryQEDLEELTERLEEqeevvEEAAEQLAEAEARLEAAEEEVDSLKSQLADYQqaldvQQTRAIqyqqavqALEKARALC 429
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 578 EELDghsggIEPDqgpgseecnplnmSIEAELVIEQMKEQhhrdlchlrlELEDKVRHYEKQLDDTRVASEQEQAAMK-- 655
Cdd:COG3096 430 GLPD-----LTPE-------------NAEDYLAAFRAKEQ----------QATEEVLELEQKLSVADAARRQFEKAYElv 481
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 656 ----------QKYEQGVHTLEK---------RVSELRSEIADLEGQAAVLREAHHKAS--CRHEEEKRQLQMAFDEEKAQ 714
Cdd:COG3096 482 ckiageversQAWQTARELLRRyrsqqalaqRLQQLRAQLAELEQRLRQQQNAERLLEefCQRIGQQLDAAEELEELLAE 561
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 568978938 715 LQEEL-----RQEHERELQARLQQAAESFRQEREGLAQAA 749
Cdd:COG3096 562 LEAQLeeleeQAAEAVEQRSELRQQLEQLRARIKELAARA 601
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
378-929 |
4.27e-04 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 44.96 E-value: 4.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 378 QVVREKEKLRSDLDKAEKLKSLMASEVDDHHAAIERRNEYNLRKLDEEYKERIAALKNELRQEREQMlQQVGKQRVELEQ 457
Cdd:TIGR00618 264 QLRARIEELRAQEAVLEETQERINRARKAAPLAAHIKAVTQIEQQAQRIHTELQSKMRSRAKLLMKR-AAHVKQQSSIEE 342
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 458 EIQKAKT---EENYIRDR--LALSLKENNRLETELLENAEKLAE-YESLTQKLQ--RSLENVLAEKFGDLDPSSAEFFLQ 529
Cdd:TIGR00618 343 QRRLLQTlhsQEIHIRDAheVATSIREISCQQHTLTQHIHTLQQqKTTLTQKLQslCKELDILQREQATIDTRTSAFRDL 422
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 530 EERLAQMRNEYEQQCRLLQDQVDELQSELEEYQAQGRVLRLPLK--NSLSEELDGHSGGIEPDQGPGSEECNPLNMSIEA 607
Cdd:TIGR00618 423 QGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQslKEREQQLQTKEQIHLQETRKKAVVLARLLELQEE 502
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 608 ELVIEQMKEQHHRDL---------CHLRLELEDKVRHYEKQLDDT---------RVASEQEQAAMKQKYEQGVHTLEKRV 669
Cdd:TIGR00618 503 PCPLCGSCIHPNPARqdidnpgplTRRMQRGEQTYAQLETSEEDVyhqltserkQRASLKEQMQEIQQSFSILTQCDNRS 582
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 670 SE----LRSEIADLEGQAAVLREAHHKASCRHEEEKRQLQMAFDEEKAQLQEELRQEHERELQARLQQAAESFRQEREGL 745
Cdd:TIGR00618 583 KEdipnLQNITVRLQDLTEKLSEAEDMLACEQHALLRKLQPEQDLQDVRLHLQQCSQELALKLTALHALQLTLTQERVRE 662
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 746 AQAAWTEEKVRGLEQSYQEQLLSLEEKHALEKEELREELSEHHRRELQEGRYESEKL-QEENSILRNEITTLNEEDSISN 824
Cdd:TIGR00618 663 HALSIRVLPKELLASRQLALQKMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREfNEIENASSSLGSDLAAREDALN 742
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 825 LKLEELNGSQEELWQKIETIEQEKASIQTMVEKLKKQVSDLK----IKNQQLDSENIELSQKNSQNKEELKTLNQRL--- 897
Cdd:TIGR00618 743 QSLKELMHQARTVLKARTEAHFNNNEEVTAALQTGAELSHLAaeiqFFNRLREEDTHLLKTLEAEIGQEIPSDEDILnlq 822
|
570 580 590
....*....|....*....|....*....|..
gi 568978938 898 AEMLCQREEPGACTSEKWEQENASLKEELDHY 929
Cdd:TIGR00618 823 CETLVQEEEQFLSRLEEKSATLGEITHQLLKY 854
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
446-765 |
5.08e-04 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 44.73 E-value: 5.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 446 QQVGKQRVELEQEIQKAKTEENYIRDRLALSLKENNRlETELLENAEKLAEYESLTQKLQRSLENVLaekfgdldpssae 525
Cdd:pfam17380 289 QQEKFEKMEQERLRQEKEEKAREVERRRKLEEAEKAR-QAEMDRQAAIYAEQERMAMERERELERIR------------- 354
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 526 fflQEERLAQMRNEYEQQCRLLQDQVDELQSELEEYQAQGRVLRLPLKNSLSEELDGHSGGIEPDQGPGSEECNPLNMSI 605
Cdd:pfam17380 355 ---QEERKRELERIRQEEIAMEISRMRELERLQMERQQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAEQEE 431
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 606 EAELVIEQMKEQHHRDLCHLRLEledkvrHYEKQLDDTRVASEQEQAAMKQKYEQGVHTLEKRVSELRSEIADLEGQA-- 683
Cdd:pfam17380 432 ARQREVRRLEEERAREMERVRLE------EQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRKILEKELEErk 505
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 684 -AVLREAHHKASCRHEEEKRQLQMAFDEEKAQLQEELRQEHERELQARLQQAAESFRQEREGLAQAAWTEEKVRGLEQSY 762
Cdd:pfam17380 506 qAMIEEERKRKLLEKEMEERQKAIYEEERRREAEEERRKQQEMEERRRIQEQMRKATEERSRLEAMEREREMMRQIVESE 585
|
...
gi 568978938 763 QEQ 765
Cdd:pfam17380 586 KAR 588
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
531-765 |
6.51e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 44.52 E-value: 6.51e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 531 ERLAQMRNEYEQQCRLLQDQVDELQSELEEYQAQGRVLRLpLKNSLSEELDghsggiepdqgpgseecnplNMSIEAELV 610
Cdd:COG4913 613 AALEAELAELEEELAEAEERLEALEAELDALQERREALQR-LAEYSWDEID--------------------VASAEREIA 671
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 611 ieqmkeqhhrdlchlrlELEDKVRHYEKQLDDTRVASEQEQAamkqkyeqgvhtLEKRVSELRSEIADLEGQAAVLREAH 690
Cdd:COG4913 672 -----------------ELEAELERLDASSDDLAALEEQLEE------------LEAELEELEEELDELKGEIGRLEKEL 722
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568978938 691 HKASCRHEEEKRQLQMAFDEEKAQLQEELRQEHERELQ-ARLQQAAESFRQEREGLAQAAW-TEEKVRGLEQSYQEQ 765
Cdd:COG4913 723 EQAEEELDELQDRLEAAEDLARLELRALLEERFAAALGdAVERELRENLEERIDALRARLNrAEEELERAMRAFNRE 799
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
616-1043 |
8.15e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 43.90 E-value: 8.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 616 EQHHRDLCHLRLELEDKVRHYEKQLDDTRVASEQEQAAMKQKYEqgvhtLEKRVSELRSEIADLEGQAAVLreahhkasc 695
Cdd:PRK03918 161 ENAYKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEE-----VLREINEISSELPELREELEKL--------- 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 696 rhEEEKRQLQMAFDE-EKAQLQEELRQEHERELQARLQQAAESFRQEREGLAQaawTEEKVRGLE--QSYQEQLLSLEEk 772
Cdd:PRK03918 227 --EKEVKELEELKEEiEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEE---LEEKVKELKelKEKAEEYIKLSE- 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 773 halekeelreelsehHRRELQEGRYESEKLQEENSILRNEITTLNEEDSISNLKLEELNGSQEELWQKIETIE------Q 846
Cdd:PRK03918 301 ---------------FYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEerhelyE 365
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 847 EKASIQTMVEKLKKQVSDLKIknQQLDSENIELSQKNSQNKEELKTLNQRLAEMLCQREE-----------PGACTSEKW 915
Cdd:PRK03918 366 EAKAKKEELERLKKRLTGLTP--EKLEKELEELEKAKEEIEEEISKITARIGELKKEIKElkkaieelkkaKGKCPVCGR 443
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 916 EQENASLKEELDHYKVQtstlVSSLEAELSEVKLQTHVMEQENLLLKDELERLKQLHRCPDLSDFQQKMSSILS-YN--- 991
Cdd:PRK03918 444 ELTEEHRKELLEEYTAE----LKRIEKELKEIEEKERKLRKELRELEKVLKKESELIKLKELAEQLKELEEKLKkYNlee 519
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 992 --------EKLLKEKEVLSEELKSCADKLAESSLLEHRIATMKQEQTAWEEQSESLKSQL 1043
Cdd:PRK03918 520 lekkaeeyEKLKEKLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKEL 579
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
428-564 |
9.48e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.21 E-value: 9.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 428 ERIAALKNELRQEREQmLQQVGKQRVELEQEIQKAKTEENYIRDRLALSLKENNRLETELLENAEKLAEYESLTQKLQRS 507
Cdd:COG4942 20 DAAAEAEAELEQLQQE-IAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 508 LEN---------VLAEKFGDLDPS----SAEFFLQEERLAQMRNEYEQQcrlLQDQVDELQSELEEYQAQ 564
Cdd:COG4942 99 LEAqkeelaellRALYRLGRQPPLalllSPEDFLDAVRRLQYLKYLAPA---RREQAEELRADLAELAAL 165
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
339-906 |
1.02e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 43.79 E-value: 1.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 339 LTELTLALENELlvtknGIHQAALASFKAEIRHLLERVDQVVRE--KEKLRSDLDKAEKLKSLMASEV--DDHHAAIERR 414
Cdd:PRK04863 454 ATEELLSLEQKL-----SVAQAAHSQFEQAYQLVRKIAGEVSRSeaWDVARELLRRLREQRHLAEQLQqlRMRLSELEQR 528
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 415 --NEYNLRKLDEEYKERI------AALKNELRQEREQMLQ-------QVGKQRVELEQEIQKAKTEENYIRDRLALSLKE 479
Cdd:PRK04863 529 lrQQQRAERLLAEFCKRLgknlddEDELEQLQEELEARLEslsesvsEARERRMALRQQLEQLQARIQRLAARAPAWLAA 608
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 480 NNRLETELLENAEKLAEYESLTQKLQRSLEnvlaekfgdldpssaefflQEERLAQMRNEYEQQCRLLQDQVDELQ---- 555
Cdd:PRK04863 609 QDALARLREQSGEEFEDSQDVTEYMQQLLE-------------------RERELTVERDELAARKQALDEEIERLSqpgg 669
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 556 SELEEYQAQ----GRVLrlplknsLSEELDGhsggIEPDQGPG-SEECNPLNMSI---EAELVIEQMKEQhhrDLCHLRL 627
Cdd:PRK04863 670 SEDPRLNALaerfGGVL-------LSEIYDD----VSLEDAPYfSALYGPARHAIvvpDLSDAAEQLAGL---EDCPEDL 735
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 628 ELedkVRHYEKQLDDTRVASEQEQAAMKQKYEQgvhtLEKRVSELRSE-----------IADLEGQAAVLREAHHKASCR 696
Cdd:PRK04863 736 YL---IEGDPDSFDDSVFSVEELEKAVVVKIAD----RQWRYSRFPEVplfgraarekrIEQLRAEREELAERYATLSFD 808
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 697 HEEEKRQLQ-----------MAFDEEKAQLQEELRQEHeRELQARLQQAAESFRQEREGLAQAawtEEKVRGLEQSYQEQ 765
Cdd:PRK04863 809 VQKLQRLHQafsrfigshlaVAFEADPEAELRQLNRRR-VELERALADHESQEQQQRSQLEQA---KEGLSALNRLLPRL 884
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 766 LLSLEEkhalekeelreelseHHRRELQEGRYESEKLQEENSILRNEITTLNeedsisnlKLEELNGSQEELWQKIETIE 845
Cdd:PRK04863 885 NLLADE---------------TLADRVEEIREQLDEAEEAKRFVQQHGNALA--------QLEPIVSVLQSDPEQFEQLK 941
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568978938 846 QEKASIQTMVEKLKKQVSDLKIKNQQLD----SENIELSQKNSQNKEELKtlnQRLAEMLCQREE 906
Cdd:PRK04863 942 QDYQQAQQTQRDAKQQAFALTEVVQRRAhfsyEDAAEMLAKNSDLNEKLR---QRLEQAEQERTR 1003
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
787-1248 |
1.04e-03 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 43.57 E-value: 1.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 787 HHRRELQEGRYESEKLQEEnsilrneittLNEEDSISNLKLEELNGSQEELWQKIETIEQEKASIQTMVEKLKKQVSDLK 866
Cdd:pfam15921 75 HIERVLEEYSHQVKDLQRR----------LNESNELHEKQKFYLRQSVIDLQTKLQEMQMERDAMADIRRRESQSQEDLR 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 867 iknQQLDSENIELSQKNSQNKEELKTLNQRLAEMLCQREEPGACTSEKW----EQENASLKEELDHYKVQT---STLVSS 939
Cdd:pfam15921 145 ---NQLQNTVHELEAAKCLKEDMLEDSNTQIEQLRKMMLSHEGVLQEIRsilvDFEEASGKKIYEHDSMSTmhfRSLGSA 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 940 LEAELSEVKLQTHVMEQENLLLKDELERLKqlhrcpdlSDFQQKMSSILSYN----EKLLKEKEV----LSEELKSCADK 1011
Cdd:pfam15921 222 ISKILRELDTEISYLKGRIFPVEDQLEALK--------SESQNKIELLLQQHqdriEQLISEHEVeitgLTEKASSARSQ 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 1012 LAE-SSLLEHRIATMKQEQTAWEEQSESLKSQLAVSQAKVQN----LEDVLQNVNLQMAEIESDLQVTRQEKEALKQEVM 1086
Cdd:pfam15921 294 ANSiQSQLEIIQEQARNQNSMYMRQLSDLESTVSQLRSELREakrmYEDKIEELEKQLVLANSELTEARTERDQFSQESG 373
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 1087 SLHRQLQNAIDKdwVSETAPHLSGLRGQQRRLsWDK-------LDHLMNEEPQlLCQESKRLQTVVQNTQADL------- 1152
Cdd:pfam15921 374 NLDDQLQKLLAD--LHKREKELSLEKEQNKRL-WDRdtgnsitIDHLRRELDD-RNMEVQRLEALLKAMKSECqgqmerq 449
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 1153 -------THSREKVRQLESNLLPTKHQKQLnqpcTVKSTEQEKLTLkrecEQSQKEQSPTSrkvgqmGSLERGLETIHLE 1225
Cdd:pfam15921 450 maaiqgkNESLEKVSSLTAQLESTKEMLRK----VVEELTAKKMTL----ESSERTVSDLT------ASLQEKERAIEAT 515
|
490 500
....*....|....*....|...
gi 568978938 1226 NEGLKKKQVRLDEKLMEMQPLRS 1248
Cdd:pfam15921 516 NAEITKLRSRVDLKLQELQHLKN 538
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
701-925 |
1.28e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 43.19 E-value: 1.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 701 KRQLQMAFDEEKaqlQEELRQEHE---RELQARLQ-QAAESFRQ------------------EREGLAQAAWTEEKVRGL 758
Cdd:pfam17380 286 ERQQQEKFEKME---QERLRQEKEekaREVERRRKlEEAEKARQaemdrqaaiyaeqermamERERELERIRQEERKREL 362
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 759 EQSYQEQLLSLEEKHALEKEELREELSEHH--RRELQEGRyeSEKLQEEN---SILRNEITTLNEEDSISNLKLEELNGS 833
Cdd:pfam17380 363 ERIRQEEIAMEISRMRELERLQMERQQKNErvRQELEAAR--KVKILEEErqrKIQQQKVEMEQIRAEQEEARQREVRRL 440
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 834 QEELWQKIETIEQEKASIQTMVEKLKKQVSDLKIKNQQLDSENIELSQKNSQNKEEL-KTLNQRLAEMLCQREEPGACTS 912
Cdd:pfam17380 441 EEERAREMERVRLEEQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRKILeKELEERKQAMIEEERKRKLLEK 520
|
250
....*....|...
gi 568978938 913 EKWEQENASLKEE 925
Cdd:pfam17380 521 EMEERQKAIYEEE 533
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
646-957 |
1.99e-03 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 42.57 E-value: 1.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 646 ASEQEQAAMKQKYEQGVHTLEKRVSELRSEIADLEGQAAVLREAHHKASCRHEEEKRqLQMAFDEEKAQL--QEELRQEH 723
Cdd:pfam07888 52 AANRQREKEKERYKRDREQWERQRRELESRVAELKEELRQSREKHEELEEKYKELSA-SSEELSEEKDALlaQRAAHEAR 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 724 ERELQARLQQAAESFRQEREGLAQAAWTEEKVRGLEQSYQEQLLSLEEKhalekEELREELSEHHRRELQEGRYESEKLQ 803
Cdd:pfam07888 131 IRELEEDIKTLTQRVLERETELERMKERAKKAGAQRKEEEAERKQLQAK-----LQQTEEELRSLSKEFQELRNSLAQRD 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 804 EENSILRNEITTLNEEDSISNLKLEELNGSQEELwqkiETIEQEKASIQTMVEKLKKQVSDLKiknQQLDSENIELSQKN 883
Cdd:pfam07888 206 TQVLQLQDTITTLTQKLTTAHRKEAENEALLEEL----RSLQERLNASERKVEGLGEELSSMA---AQRDRTQAELHQAR 278
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568978938 884 SQNKEelktLNQRLAEM-LCQREEPGactseKWEQENASLKE--ELDHYKVQT-STLVSSLEAELSEVKLQTHVMEQE 957
Cdd:pfam07888 279 LQAAQ----LTLQLADAsLALREGRA-----RWAQERETLQQsaEADKDRIEKlSAELQRLEERLQEERMEREKLEVE 347
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
682-1095 |
2.06e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 42.63 E-value: 2.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 682 QAAVLREAHHKA-SCRHEEEKRQLQMAfdEEKAQLQEElrqehERELQARLQQAAESFRQEREGLAQAawteEKVrgleQ 760
Cdd:COG3096 286 RALELRRELFGArRQLAEEQYRLVEMA--RELEELSAR-----ESDLEQDYQAASDHLNLVQTALRQQ----EKI----E 350
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 761 SYQEQLLSLEEKhalekeelreelsehhRRELQEGRYESEKLQEENsilrnEITTLNEEDSISNLK---------LEELN 831
Cdd:COG3096 351 RYQEDLEELTER----------------LEEQEEVVEEAAEQLAEA-----EARLEAAEEEVDSLKsqladyqqaLDVQQ 409
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 832 GSQEELWQKIETIEQEKASIQT---MVEKLKKQVSDLKIKNQQLDSENIELSQKNSQNKEELKTLNQRLAemLCQREEPG 908
Cdd:COG3096 410 TRAIQYQQAVQALEKARALCGLpdlTPENAEDYLAAFRAKEQQATEEVLELEQKLSVADAARRQFEKAYE--LVCKIAGE 487
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 909 ACTSEKWEQENASLKE--ELDHYKVQtstlVSSLEAELSEvkLQTHVMEQENLllkdelERLkqlhrcpdLSDFQQKMSS 986
Cdd:COG3096 488 VERSQAWQTARELLRRyrSQQALAQR----LQQLRAQLAE--LEQRLRQQQNA------ERL--------LEEFCQRIGQ 547
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 987 ILSYNEKLLKEKEVLSEELKSCADKLAESS-----------LLEHRIATMKQEQTAW---EEQSESLKSQLAVSQAKVQN 1052
Cdd:COG3096 548 QLDAAEELEELLAELEAQLEELEEQAAEAVeqrselrqqleQLRARIKELAARAPAWlaaQDALERLREQSGEALADSQE 627
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 568978938 1053 LEDVLQnvnlQMAEIESDLQVTRQEKEALKQEVMSLHRQLQNA 1095
Cdd:COG3096 628 VTAAMQ----QLLEREREATVERDELAARKQALESQIERLSQP 666
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
702-1392 |
2.88e-03 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 42.27 E-value: 2.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 702 RQLQMAFDEEKAQLQEELRqehERELQARLQQAAESFRQEREGLAQAAWTEEKVRGleqsyQEQLLSLEEKHALEKEELR 781
Cdd:pfam02463 145 EIIAMMKPERRLEIEEEAA---GSRLKRKKKEALKKLIEETENLAELIIDLEELKL-----QELKLKEQAKKALEYYQLK 216
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 782 EELsehhrRELQEGRYESEKLQEENSILRNEITTLNEEDSISNLKLEELNGSQEELWQKIETIEQEKASIQTMVEKLKKQ 861
Cdd:pfam02463 217 EKL-----ELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLL 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 862 VSDLKIKNQQL---------DSENIELSQKNSQNKEELKTLNQRLAEMLCQREEPGACTSEKWEQENASLKEELDHYKVQ 932
Cdd:pfam02463 292 AKEEEELKSELlklerrkvdDEEKLKESEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQL 371
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 933 TSTLVSSL----EAELSEVKLQTHVMEQENLLLKDELERLKQLHRCPDLSDFQQKMSSILSYNEKLLKEKEVLSEELKSC 1008
Cdd:pfam02463 372 EEELLAKKklesERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKE 451
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 1009 ADKLAESSLLEHRIATMKQEQTAWEEQSESLKSQLAVSQAKVQNLEDVLQNVNLQMAEIESDLQVTRQEKEALKQEVMSL 1088
Cdd:pfam02463 452 ELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRL 531
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 1089 HRQLQNAIDKDWVSETAPHLSGLRGQQRRLSWDKLDHLMNEEPQLLCQESKRLQTVVQNTQADLTHSREKVRQLESNLLP 1168
Cdd:pfam02463 532 GDLGVAVENYKVAISTAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKA 611
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 1169 TKHQKQLNQPCTVKSTEQEKLTLKRECEQSQKEQSPTSRKVGQMGSL-ERGLETIHLENEGLKKKQVRLDEKLMEMQPLR 1247
Cdd:pfam02463 612 TLEADEDDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLaEKSEVKASLSELTKELLEIQELQEKAESELAK 691
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 1248 STVTRSPSSHWDLQLLQQQACPMVPREQFLQLQQQLLQAEKRSQHLQEELENRTSETNTPQGNQEHLVNLMEERMIEVEQ 1327
Cdd:pfam02463 692 EEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSL 771
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568978938 1328 KLKLvKRLLQEKVNQLKEQLCKNTKTDAVVKDLYVENAQLLKALEMTEQRQKTAEKRNFLLEEKI 1392
Cdd:pfam02463 772 KEKE-LAEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEEL 835
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
629-733 |
4.52e-03 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 41.38 E-value: 4.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 629 LEDKVRHYEKQLDDTRVASEQEQAAMKQKYEQGVHTLEKRVSELRSEIADLEGQAAVLREAHHKASCRHEEEKRQLQM-- 706
Cdd:COG2433 382 LEELIEKELPEEEPEAEREKEHEERELTEEEEEIRRLEEQVERLEAEVEELEAELEEKDERIERLERELSEARSEERRei 461
|
90 100 110
....*....|....*....|....*....|....*.
gi 568978938 707 -------AFDEEKAQLQEELRQEHER--ELQARLQQ 733
Cdd:COG2433 462 rkdreisRLDREIERLERELEEERERieELKRKLER 497
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
359-535 |
4.67e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 40.97 E-value: 4.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 359 QAALASFKAEIRHLLERVDQVVREKEKLRSDLDKAEKlkslmasEVDDHHAAIERRNEyNLRKLDEEYKERIAALKNELR 438
Cdd:COG3883 29 QAELEAAQAELDALQAELEELNEEYNELQAELEALQA-------EIDKLQAEIAEAEA-EIEERREELGERARALYRSGG 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 439 Q-----------------EREQMLQQVGKQRVELEQEIQKAKTEENYIRDRLALSLKENNRLETELLENAEKLAEYESLT 501
Cdd:COG3883 101 SvsyldvllgsesfsdflDRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAELEAQQAEQ 180
|
170 180 190
....*....|....*....|....*....|....
gi 568978938 502 QKLQRSLENVLAEKFGDLDPSSAEFFLQEERLAQ 535
Cdd:COG3883 181 EALLAQLSAEEAAAEAQLAELEAELAAAEAAAAA 214
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
431-901 |
5.48e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 41.29 E-value: 5.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 431 AALKNELRQEREQMLQQVGKQRVELEQEIQKAKTEenyiRDRLALSLKENNRLETELLENAEKLAEYESLTQKLQRSLEn 510
Cdd:COG4717 45 AMLLERLEKEADELFKPQGRKPELNLKELKELEEE----LKEAEEKEEEYAELQEELEELEEELEELEAELEELREELE- 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 511 vLAEKFGDLDPSSAEFFLQEERLAQMRNEYEQqcrlLQDQVDELQSELEEYQAQGRVLRlPLKNSLSEELDGHSGGIEpd 590
Cdd:COG4717 120 -KLEKLLQLLPLYQELEALEAELAELPERLEE----LEERLEELRELEEELEELEAELA-ELQEELEELLEQLSLATE-- 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 591 qgpgseecNPLNMSIEAELVIEQMKEQHHRDLCHLRLELED---KVRHYEKQLDDTRVASEQEQAAMKQKYEQGVHTLEK 667
Cdd:COG4717 192 --------EELQDLAEELEELQQRLAELEEELEEAQEELEEleeELEQLENELEAAALEERLKEARLLLLIAAALLALLG 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 668 RVSELRSEIADLEGQAAVLREAHHKASCRHEEEKRQLQMAFDE-----EKAQLQEELRQEHERELQARLQQAAESFRQER 742
Cdd:COG4717 264 LGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEElqalpALEELEEEELEELLAALGLPPDLSPEELLELL 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 743 EGLAQAAWTEEKVRGLEQSYQEQLLsleEKHALEKEELREELSEHHRRELQEGRYESEKLQEENSILRNEITTLNEEdsi 822
Cdd:COG4717 344 DRIEELQELLREAEELEEELQLEEL---EQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGE--- 417
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568978938 823 snLKLEELNGSQEELWQKIETIEQEKASIQTMVEKLKKQVSDLKIKNQQLdseniELSQKNSQNKEELKTLNQRLAEML 901
Cdd:COG4717 418 --LEELLEALDEEELEEELEELEEELEELEEELEELREELAELEAELEQL-----EEDGELAELLQELEELKAELRELA 489
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
316-738 |
6.07e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 40.91 E-value: 6.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 316 EEGIENSQEILKALDFSLDgninltELTLALENELLVTKNGIHQAALASFKAEIRHLLERVDQVVREKEKLRSDLDKAEK 395
Cdd:COG4717 101 EEELEELEAELEELREELE------KLEKLLQLLPLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAE 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 396 LKSLMASEVDDHHAAIERRNEYNLRKLdEEYKERIAALKNEL---RQEREQMLQQVGKQRVELEQEIQKAKTEENYIRDR 472
Cdd:COG4717 175 LQEELEELLEQLSLATEEELQDLAEEL-EELQQRLAELEEELeeaQEELEELEEELEQLENELEAAALEERLKEARLLLL 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 473 LALSLKENNRLETELLENAEKLAEYESLTQKL-------QRSLENVLAEKFGDLDPSSAEFFLQEERLAQMRNEYEQQCR 545
Cdd:COG4717 254 IAAALLALLGLGGSLLSLILTIAGVLFLVLGLlallfllLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPD 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 546 LLQDQVDELQSELEEYQAQGRVLRlplknSLSEELDghsggIEPDQGPGSEECNPLNMSIEAELVIEQMKEQHHRDLCHL 625
Cdd:COG4717 334 LSPEELLELLDRIEELQELLREAE-----ELEEELQ-----LEELEQEIAALLAEAGVEDEEELRAALEQAEEYQELKEE 403
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 626 RLELEDKVR-HYEKQLDDTRVASEQEQAAMKQKYEQGVHTLEKRVSELRSEIADLEGQAAVLREAH--HKASCRHEEEKR 702
Cdd:COG4717 404 LEELEEQLEeLLGELEELLEALDEEELEEELEELEEELEELEEELEELREELAELEAELEQLEEDGelAELLQELEELKA 483
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 568978938 703 QLQMAFDEEKA-----QLQEELRQEHERELQARLQQAAESF 738
Cdd:COG4717 484 ELRELAEEWAAlklalELLEEAREEYREERLPPVLERASEY 524
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
377-1080 |
6.93e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 41.28 E-value: 6.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 377 DQVVREKEKLRSDLDKAEKLKSLMASEV--DDHHAAIERRNEYNLRK-------LDEEYKERIAALKNELRQEREQMLQQ 447
Cdd:PTZ00121 1039 DDVLKEKDIIDEDIDGNHEGKAEAKAHVgqDEGLKPSYKDFDFDAKEdnradeaTEEAFGKAEEAKKTETGKAEEARKAE 1118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 448 VGKQRVELEQEIQKAKTEENYIRDRLALSLKENNRLE-TELLENAEKL-----AEYESLTQKLQRSLENVLAE---KFGD 518
Cdd:PTZ00121 1119 EAKKKAEDARKAEEARKAEDARKAEEARKAEDAKRVEiARKAEDARKAeearkAEDAKKAEAARKAEEVRKAEelrKAED 1198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 519 LDPSSAEFFLQEERLAQMRNEYEQQCRLLQ-DQVDELQSELEEYQAQGRVLRLPLKNSLSEELDGHSGgiEPDQGPGSEE 597
Cdd:PTZ00121 1199 ARKAEAARKAEEERKAEEARKAEDAKKAEAvKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFA--RRQAAIKAEE 1276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 598 CNPLNMSIEAElviEQMKEQHHRdlchlRLELEDKVRHYEKQLDDTRVASEQEQAAMKQKyeqgvhtleKRVSELRSEIA 677
Cdd:PTZ00121 1277 ARKADELKKAE---EKKKADEAK-----KAEEKKKADEAKKKAEEAKKADEAKKKAEEAK---------KKADAAKKKAE 1339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 678 DLEGQAAVLR---EAHHKASCRHEEEKRQLQMAFDEEKAQLQEELRQEHERELQARLQQAAESFRQEREGLAQAAWTEEK 754
Cdd:PTZ00121 1340 EAKKAAEAAKaeaEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKK 1419
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 755 VRGLEQSYQEQLLSLEEKHALEKEELREELSehhRRELQEGRYESEKLQEENSILRNEITTLNEEDSisnlKLEELNGSQ 834
Cdd:PTZ00121 1420 ADEAKKKAEEKKKADEAKKKAEEAKKADEAK---KKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAK----KADEAKKKA 1492
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 835 EELWQKIEtiEQEKAsiqtmvEKLKKQVSDLKIKNQQLDSENIELSQKNSQNKEELKTLNQRLAEMLCQREEPGAcTSEK 914
Cdd:PTZ00121 1493 EEAKKKAD--EAKKA------AEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKK-AEEK 1563
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 915 WEQENASLKEELDHYKVQTSTLVSSLEAELSEVKLQTHVMEQE---NLLLKDELERLK--QLHRCPDLSDFQQKMSSILS 989
Cdd:PTZ00121 1564 KKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKmkaEEAKKAEEAKIKaeELKKAEEEKKKVEQLKKKEA 1643
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 990 YNEKLLKEKEVLSEELKSCADKLAESSLLEHRIA-TMKQEQTAWEEQSESLKSQL----AVSQAKVQNLEDVLQNVNLQM 1064
Cdd:PTZ00121 1644 EEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAeEAKKAEEDEKKAAEALKKEAeeakKAEELKKKEAEEKKKAEELKK 1723
|
730
....*....|....*.
gi 568978938 1065 AEIESDLQVTRQEKEA 1080
Cdd:PTZ00121 1724 AEEENKIKAEEAKKEA 1739
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
368-548 |
8.08e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 40.71 E-value: 8.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 368 EIRHLLERVDQvvrekekLRSDLDKAEKLkslmaseVDDHHAAIERRNEYNLR-KLDEEYKERIAALKNELRQEREQMLQ 446
Cdd:COG3096 506 SQQALAQRLQQ-------LRAQLAELEQR-------LRQQQNAERLLEEFCQRiGQQLDAAEELEELLAELEAQLEELEE 571
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 447 QV---GKQRVELEQEIQKAKTEENYIRDRLALSLKENNRLETELLENAEKLAEYESLTQKLQRSLENvlaekfgdldpsS 523
Cdd:COG3096 572 QAaeaVEQRSELRQQLEQLRARIKELAARAPAWLAAQDALERLREQSGEALADSQEVTAAMQQLLER------------E 639
|
170 180
....*....|....*....|....*
gi 568978938 524 AEFFLQEERLAQMRNEYEQQCRLLQ 548
Cdd:COG3096 640 REATVERDELAARKQALESQIERLS 664
|
|
| RecN |
COG0497 |
DNA repair ATPase RecN [Replication, recombination and repair]; |
431-564 |
8.17e-03 |
|
DNA repair ATPase RecN [Replication, recombination and repair];
Pssm-ID: 440263 [Multi-domain] Cd Length: 555 Bit Score: 40.44 E-value: 8.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 431 AALKNELRQEREQmLQQVGKQRVELEQEIQKAKTEENYIR------DRLALSLKENNRLETEL--LENAEKLAEyesltq 502
Cdd:COG0497 154 EELLEEYREAYRA-WRALKKELEELRADEAERARELDLLRfqleelEAAALQPGEEEELEEERrrLSNAEKLRE------ 226
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 503 KLQRSLEnVLAEkfgdlDPSSAEFFLQE-----ERLAQMRNEYEQQCRLLQD---QVDELQSELEEYQAQ 564
Cdd:COG0497 227 ALQEALE-ALSG-----GEGGALDLLGQalralERLAEYDPSLAELAERLESaliELEEAASELRRYLDS 290
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
800-1016 |
9.23e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 40.13 E-value: 9.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 800 EKLQEENSILRNEITTLNEEdsisnlkLEELNGSQEELWQKIETIEQEKASIQTMVEKLKKQVSDLKIKNQQLDSENIEL 879
Cdd:COG4942 23 AEAEAELEQLQQEIAELEKE-------LAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAEL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568978938 880 SQKNSQNKEELKTL---------NQRLAEMLCQREEPGACTSEKWEQE-NASLKEELDHYKVQTSTLvSSLEAELSEVKL 949
Cdd:COG4942 96 RAELEAQKEELAELlralyrlgrQPPLALLLSPEDFLDAVRRLQYLKYlAPARREQAEELRADLAEL-AALRAELEAERA 174
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568978938 950 QTHVMEQENLLLKDELERLKQLHRcPDLSDFQQKMSSILSYNEKLLKEKEVLSEELKSCADKLAESS 1016
Cdd:COG4942 175 ELEALLAELEEERAALEALKAERQ-KLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAA 240
|
|
| |
