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Conserved domains on  [gi|568941378|ref|XP_006505951|]
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protein TEX261 isoform X2 [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Erv26 super family cl04419
Transmembrane adaptor Erv26; Erv26 is an integral membrane protein that is packed into COPII ...
 1-123 1.92e-47

Transmembrane adaptor Erv26; Erv26 is an integral membrane protein that is packed into COPII vesicles and cycles between the ER and Golgi compartments. It directs pro-alkaline phosphatase into endoplasmic reticulum-derived COPII transport vesicles.


The actual alignment was detected with superfamily member pfam04148:

Pssm-ID: 461197  Cd Length: 202  Bit Score: 151.94  E-value: 1.92e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568941378    1 MWFMYVLSWLSLFIQVAFITLAVAAGLYYLAELIEEYTVATSRIIKYMIWFSTAVLIGLYVFERFPTSMIGVGLFTNLVY 80
Cdd:pfam04148   1 MWILPLLSYLGTVVGFLFLTLSIASGLYYLSELVEEHTVPAKRFLTRLIYFIIAIQVLLWLFDGFPFTLTLFSIFSHVVY 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 568941378   81 FGLLQTFPFIMLTSPNFILSCGLVVVNHYLAFQFFAEEYYPFS 123
Cdd:pfam04148  81 LQNLRRFPFVSLTSPLFILSCVLVVLNHYLWFRHFSNPQFRAD 123
 
Name Accession Description Interval E-value
Erv26 pfam04148
Transmembrane adaptor Erv26; Erv26 is an integral membrane protein that is packed into COPII ...
 1-123 1.92e-47

Transmembrane adaptor Erv26; Erv26 is an integral membrane protein that is packed into COPII vesicles and cycles between the ER and Golgi compartments. It directs pro-alkaline phosphatase into endoplasmic reticulum-derived COPII transport vesicles.


Pssm-ID: 461197  Cd Length: 202  Bit Score: 151.94  E-value: 1.92e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568941378    1 MWFMYVLSWLSLFIQVAFITLAVAAGLYYLAELIEEYTVATSRIIKYMIWFSTAVLIGLYVFERFPTSMIGVGLFTNLVY 80
Cdd:pfam04148   1 MWILPLLSYLGTVVGFLFLTLSIASGLYYLSELVEEHTVPAKRFLTRLIYFIIAIQVLLWLFDGFPFTLTLFSIFSHVVY 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 568941378   81 FGLLQTFPFIMLTSPNFILSCGLVVVNHYLAFQFFAEEYYPFS 123
Cdd:pfam04148  81 LQNLRRFPFVSLTSPLFILSCVLVVLNHYLWFRHFSNPQFRAD 123
 
Name Accession Description Interval E-value
Erv26 pfam04148
Transmembrane adaptor Erv26; Erv26 is an integral membrane protein that is packed into COPII ...
 1-123 1.92e-47

Transmembrane adaptor Erv26; Erv26 is an integral membrane protein that is packed into COPII vesicles and cycles between the ER and Golgi compartments. It directs pro-alkaline phosphatase into endoplasmic reticulum-derived COPII transport vesicles.


Pssm-ID: 461197  Cd Length: 202  Bit Score: 151.94  E-value: 1.92e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568941378    1 MWFMYVLSWLSLFIQVAFITLAVAAGLYYLAELIEEYTVATSRIIKYMIWFSTAVLIGLYVFERFPTSMIGVGLFTNLVY 80
Cdd:pfam04148   1 MWILPLLSYLGTVVGFLFLTLSIASGLYYLSELVEEHTVPAKRFLTRLIYFIIAIQVLLWLFDGFPFTLTLFSIFSHVVY 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 568941378   81 FGLLQTFPFIMLTSPNFILSCGLVVVNHYLAFQFFAEEYYPFS 123
Cdd:pfam04148  81 LQNLRRFPFVSLTSPLFILSCVLVVLNHYLWFRHFSNPQFRAD 123
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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