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Conserved domains on  [gi|568929474|ref|XP_006503333|]
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transmembrane protein 54 isoform X1 [Mus musculus]

Protein Classification

BCLP domain-containing protein( domain architecture ID 10574154)

BCLP domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
BCLP pfam12304
Beta-casein like protein; This protein is found in eukaryotes. Proteins in this family are ...
18-177 5.53e-58

Beta-casein like protein; This protein is found in eukaryotes. Proteins in this family are typically between 216 to 240 amino acids in length. This protein has two conserved sequence motifs: VLR and TRIY. BCLP is associated with cell morphology and a regulation of growth pattern of tumor. It is found in adenocarcinomas of uterine cervical tissues.


:

Pssm-ID: 463527  Cd Length: 184  Bit Score: 180.52  E-value: 5.53e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568929474   18 MKTGLVLVVLGHVSFIAAAVLHGTMLRFVATTSDAVVLQYCAVDILSVTSAIV--------------------RWTVFSL 77
Cdd:pfam12304   1 MKMGLALILVGHVNFILGALVHGTVLRHVSVPRDAITLEYAVSNVIAVVSGLLgiisgivaivlsrnlknkplHWALLVV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568929474   78 SVACALLSLTCALGLLASIAVTFATKGRALLAACTFENPELP--TLAPDCPFDPTRIYSSSLCLWAISLIFCLAESMSAV 155
Cdd:pfam12304  81 SLLNALLSAACAVGLLVSIVLTIANQGRNLLTHCNFTNLPASlsSITNECPFDPTRIYSTTLALWVPLILLCAVEAVFSV 160
                         170       180
                  ....*....|....*....|..
gi 568929474  156 RCAQLMHGLLELRPWWGKSCHH 177
Cdd:pfam12304 161 RCFAVCLSLLGLGPCRKRYRRK 182
 
Name Accession Description Interval E-value
BCLP pfam12304
Beta-casein like protein; This protein is found in eukaryotes. Proteins in this family are ...
18-177 5.53e-58

Beta-casein like protein; This protein is found in eukaryotes. Proteins in this family are typically between 216 to 240 amino acids in length. This protein has two conserved sequence motifs: VLR and TRIY. BCLP is associated with cell morphology and a regulation of growth pattern of tumor. It is found in adenocarcinomas of uterine cervical tissues.


Pssm-ID: 463527  Cd Length: 184  Bit Score: 180.52  E-value: 5.53e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568929474   18 MKTGLVLVVLGHVSFIAAAVLHGTMLRFVATTSDAVVLQYCAVDILSVTSAIV--------------------RWTVFSL 77
Cdd:pfam12304   1 MKMGLALILVGHVNFILGALVHGTVLRHVSVPRDAITLEYAVSNVIAVVSGLLgiisgivaivlsrnlknkplHWALLVV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568929474   78 SVACALLSLTCALGLLASIAVTFATKGRALLAACTFENPELP--TLAPDCPFDPTRIYSSSLCLWAISLIFCLAESMSAV 155
Cdd:pfam12304  81 SLLNALLSAACAVGLLVSIVLTIANQGRNLLTHCNFTNLPASlsSITNECPFDPTRIYSTTLALWVPLILLCAVEAVFSV 160
                         170       180
                  ....*....|....*....|..
gi 568929474  156 RCAQLMHGLLELRPWWGKSCHH 177
Cdd:pfam12304 161 RCFAVCLSLLGLGPCRKRYRRK 182
 
Name Accession Description Interval E-value
BCLP pfam12304
Beta-casein like protein; This protein is found in eukaryotes. Proteins in this family are ...
18-177 5.53e-58

Beta-casein like protein; This protein is found in eukaryotes. Proteins in this family are typically between 216 to 240 amino acids in length. This protein has two conserved sequence motifs: VLR and TRIY. BCLP is associated with cell morphology and a regulation of growth pattern of tumor. It is found in adenocarcinomas of uterine cervical tissues.


Pssm-ID: 463527  Cd Length: 184  Bit Score: 180.52  E-value: 5.53e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568929474   18 MKTGLVLVVLGHVSFIAAAVLHGTMLRFVATTSDAVVLQYCAVDILSVTSAIV--------------------RWTVFSL 77
Cdd:pfam12304   1 MKMGLALILVGHVNFILGALVHGTVLRHVSVPRDAITLEYAVSNVIAVVSGLLgiisgivaivlsrnlknkplHWALLVV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568929474   78 SVACALLSLTCALGLLASIAVTFATKGRALLAACTFENPELP--TLAPDCPFDPTRIYSSSLCLWAISLIFCLAESMSAV 155
Cdd:pfam12304  81 SLLNALLSAACAVGLLVSIVLTIANQGRNLLTHCNFTNLPASlsSITNECPFDPTRIYSTTLALWVPLILLCAVEAVFSV 160
                         170       180
                  ....*....|....*....|..
gi 568929474  156 RCAQLMHGLLELRPWWGKSCHH 177
Cdd:pfam12304 161 RCFAVCLSLLGLGPCRKRYRRK 182
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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