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Conserved domains on  [gi|568928935|ref|XP_006503077|]
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transmembrane protein 125 isoform X1 [Mus musculus]

Protein Classification

TMEM125 domain-containing protein( domain architecture ID 10633440)

TMEM125 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
TMEM125 pfam15109
TMEM125 protein family; The function of this family of transmembrane proteins, TMEM125, has ...
 15-125 5.37e-43

TMEM125 protein family; The function of this family of transmembrane proteins, TMEM125, has not, as yet, been determined. Members of this family are as yet uncharacterized. This family of proteins is found in eukaryotes. Proteins in this family are typically between 55 and 232 amino acids in length.


:

Pssm-ID: 464508  Cd Length: 111  Bit Score: 140.34  E-value: 5.37e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568928935   15 VLAEQVELWWSQQPRRSLLCFSVAVILVAGCGAGGVALLSSTSSRSGEWRLAVGTVLCLLALLVLVKQLMSSAVQDMNCI 94
Cdd:pfam15109   1 ILEEQVELWWFRDPRRSLLCYCVSVALILGLGLGGVGLLSTTSSRSGEWRLAVGTTLCLLALLVLLKQLLSSAVQDMNCV 80

                          90       100       110
                  ....*....|....*....|....*....|.
gi 568928935   95 RQAQHVALLRSGGGADAVVVLLSGFVLLVTG 125
Cdd:pfam15109  81 RSRRRIDQLRSGGGADPLLLLATGLAVLVCG 111
 
Name Accession Description Interval E-value
TMEM125 pfam15109
TMEM125 protein family; The function of this family of transmembrane proteins, TMEM125, has ...
 15-125 5.37e-43

TMEM125 protein family; The function of this family of transmembrane proteins, TMEM125, has not, as yet, been determined. Members of this family are as yet uncharacterized. This family of proteins is found in eukaryotes. Proteins in this family are typically between 55 and 232 amino acids in length.


Pssm-ID: 464508  Cd Length: 111  Bit Score: 140.34  E-value: 5.37e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568928935   15 VLAEQVELWWSQQPRRSLLCFSVAVILVAGCGAGGVALLSSTSSRSGEWRLAVGTVLCLLALLVLVKQLMSSAVQDMNCI 94
Cdd:pfam15109   1 ILEEQVELWWFRDPRRSLLCYCVSVALILGLGLGGVGLLSTTSSRSGEWRLAVGTTLCLLALLVLLKQLLSSAVQDMNCV 80

                          90       100       110
                  ....*....|....*....|....*....|.
gi 568928935   95 RQAQHVALLRSGGGADAVVVLLSGFVLLVTG 125
Cdd:pfam15109  81 RSRRRIDQLRSGGGADPLLLLATGLAVLVCG 111
 
Name Accession Description Interval E-value
TMEM125 pfam15109
TMEM125 protein family; The function of this family of transmembrane proteins, TMEM125, has ...
 15-125 5.37e-43

TMEM125 protein family; The function of this family of transmembrane proteins, TMEM125, has not, as yet, been determined. Members of this family are as yet uncharacterized. This family of proteins is found in eukaryotes. Proteins in this family are typically between 55 and 232 amino acids in length.


Pssm-ID: 464508  Cd Length: 111  Bit Score: 140.34  E-value: 5.37e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568928935   15 VLAEQVELWWSQQPRRSLLCFSVAVILVAGCGAGGVALLSSTSSRSGEWRLAVGTVLCLLALLVLVKQLMSSAVQDMNCI 94
Cdd:pfam15109   1 ILEEQVELWWFRDPRRSLLCYCVSVALILGLGLGGVGLLSTTSSRSGEWRLAVGTTLCLLALLVLLKQLLSSAVQDMNCV 80

                          90       100       110
                  ....*....|....*....|....*....|.
gi 568928935   95 RQAQHVALLRSGGGADAVVVLLSGFVLLVTG 125
Cdd:pfam15109  81 RSRRRIDQLRSGGGADPLLLLATGLAVLVCG 111
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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