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Conserved domains on  [gi|542147185|ref|XP_005482593|]
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lambda-crystallin homolog isoform X1 [Zonotrichia albicollis]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK06129 super family cl35428
3-hydroxyacyl-CoA dehydrogenase; Validated
 2-310 9.69e-116

3-hydroxyacyl-CoA dehydrogenase; Validated


The actual alignment was detected with superfamily member PRK06129:

Pssm-ID: 235706 [Multi-domain]  Cd Length: 308  Bit Score: 336.24  E-value: 9.69e-116
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185   2 EPSQVTIIGSGLIGRSWAMVFAAGGFRVKLYDIAQEQLTTALENIRKQMQEMEKSGVLKGAlSAEQQLALISVCTDLKAA 81
Cdd:PRK06129   1 PMGSVAIIGAGLIGRAWAIVFARAGHEVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGE-APDAVLARIRVTDSLADA 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185  82 VEGATFIQECTPENLELKKKIFGQLDVIVGDSVILSSSTSCLLPSKLFTGLKHVKQCIVSHPVNPPYFVPLVEIVPHPET 161
Cdd:PRK06129  80 VADADYVQESAPENLELKRALFAELDALAPPHAILASSTSALLASAFTEHLAGRERCLVAHPINPPYLIPVVEVVPAPWT 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185 162 DPSTTERTYALMKKIGQSPVKLNREIEGFVLNRLQYAVISEAWRLVGEGVISPTDLDLVMSDGLGMRYAFIGPLETMHLN 241
Cdd:PRK06129 160 APATLARAEALYRAAGQSPVRLRREIDGFVLNRLQGALLREAFRLVADGVASVDDIDAVIRDGLGLRWSFMGPFETIDLN 239

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 542147185 242 A-EGVSSYCERYAEGMKLVLNTFG-PVPeFSGETVQKVNQALSEKIPVapKALDARRKWRDECLTGLAKLK 310
Cdd:PRK06129 240 ApGGVADYAQRYGPMYRRMAAERGqPVP-WDGELVARVEAERRAALPL--DQLAARQAWRDRRLMALAAHR 307
 
Name Accession Description Interval E-value
PRK06129 PRK06129
3-hydroxyacyl-CoA dehydrogenase; Validated
 2-310 9.69e-116

3-hydroxyacyl-CoA dehydrogenase; Validated


Pssm-ID: 235706 [Multi-domain]  Cd Length: 308  Bit Score: 336.24  E-value: 9.69e-116
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185   2 EPSQVTIIGSGLIGRSWAMVFAAGGFRVKLYDIAQEQLTTALENIRKQMQEMEKSGVLKGAlSAEQQLALISVCTDLKAA 81
Cdd:PRK06129   1 PMGSVAIIGAGLIGRAWAIVFARAGHEVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGE-APDAVLARIRVTDSLADA 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185  82 VEGATFIQECTPENLELKKKIFGQLDVIVGDSVILSSSTSCLLPSKLFTGLKHVKQCIVSHPVNPPYFVPLVEIVPHPET 161
Cdd:PRK06129  80 VADADYVQESAPENLELKRALFAELDALAPPHAILASSTSALLASAFTEHLAGRERCLVAHPINPPYLIPVVEVVPAPWT 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185 162 DPSTTERTYALMKKIGQSPVKLNREIEGFVLNRLQYAVISEAWRLVGEGVISPTDLDLVMSDGLGMRYAFIGPLETMHLN 241
Cdd:PRK06129 160 APATLARAEALYRAAGQSPVRLRREIDGFVLNRLQGALLREAFRLVADGVASVDDIDAVIRDGLGLRWSFMGPFETIDLN 239

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 542147185 242 A-EGVSSYCERYAEGMKLVLNTFG-PVPeFSGETVQKVNQALSEKIPVapKALDARRKWRDECLTGLAKLK 310
Cdd:PRK06129 240 ApGGVADYAQRYGPMYRRMAAERGqPVP-WDGELVARVEAERRAALPL--DQLAARQAWRDRRLMALAAHR 307
FadB COG1250
3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]; 3-hydroxyacyl-CoA ...
 2-240 3.09e-82

3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]; 3-hydroxyacyl-CoA dehydrogenase is part of the Pathway/BioSystem: Fatty acid biosynthesis


Pssm-ID: 440862 [Multi-domain]  Cd Length: 281  Bit Score: 250.03  E-value: 3.09e-82
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185   2 EPSQVTIIGSGLIGRSWAMVFAAGGFRVKLYDIAQEQLTTALENIRKQMQEMEKSGVLKGAlSAEQQLALISVCTDLkAA 81
Cdd:COG1250    1 EIKKVAVIGAGTMGAGIAAVFANAGYEVVLLDISPEALERARARIAKLLDKLVKKGKLTEE-EADAALARITPTTDL-AA 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185  82 VEGATFIQECTPENLELKKKIFGQLDVIVGDSVILSSSTSCLLPSKLFTGLKHVKQCIVSHPVNPPYFVPLVEIVPHPET 161
Cdd:COG1250   79 LADADLVIEAVPEDLDLKQEVFAELDAVAPPDAILASNTSSLSITELAAATKRPERFIGLHFFNPVPLMPLVEVIRGPAT 158

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 542147185 162 DPSTTERTYALMKKIGQSPVKLNrEIEGFVLNRLQYAVISEAWRLVGEGVISPTDLDLVMSDGLGMRyafIGPLETMHL 240
Cdd:COG1250  159 SDETVATAVAFARRLGKTPVVVK-DTPGFIVNRILVPYLNEAIRLLEEGVASPEDIDAAMRLGFGFP---MGPFELADL 233
3HCDH_N pfam02737
3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; This family also includes lambda ...
 5-184 7.63e-65

3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; This family also includes lambda crystallin.


Pssm-ID: 397037 [Multi-domain]  Cd Length: 180  Bit Score: 202.00  E-value: 7.63e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185    5 QVTIIGSGLIGRSWAMVFAAGGFRVKLYDIAQEQLTTALENIRKQMQEMEKSGVLKgALSAEQQLALISVCTDLKAAVeG 84
Cdd:pfam02737   1 KVAVIGAGTMGAGIAQVFALAGLEVVLVDISEEALEKALERIESSLERLVEKGRIT-EEEVDAALARISFTTDLAAAV-D 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185   85 ATFIQECTPENLELKKKIFGQLDVIVGDSVILSSSTSCLLPSKLFTGLKHVKQCIVSHPVNPPYFVPLVEIVPHPETDPS 164
Cdd:pfam02737  79 ADLVIEAVPENLELKRKLFAELDAIAPPDAILATNTSSLSITELAAATKRPERFIGLHFFNPPPLMPLVEVVRGEKTSPE 158

                         170       180
                  ....*....|....*....|
gi 542147185  165 TTERTYALMKKIGQSPVKLN 184
Cdd:pfam02737 159 TVATTVELAKKIGKTPVVVK 178
fa_ox_alpha_mit TIGR02441
fatty acid oxidation complex, alpha subunit, mitochondrial; Members represent alpha subunit of ...
 6-218 4.16e-14

fatty acid oxidation complex, alpha subunit, mitochondrial; Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) _ 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human (SP:P40939), pig (SP:Q29554), and rat (SP:Q64428). The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).


Pssm-ID: 131494 [Multi-domain]  Cd Length: 737  Bit Score: 72.95  E-value: 4.16e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185    6 VTIIGSGLIGRSWAMVFAAGGFRVKLYDIAQEQLTTALENIRKQMQEMEKSGVLKgALSAEQQLALISVCTDLKaAVEGA 85
Cdd:TIGR02441 338 LAVLGAGLMGAGIAQVSVDKGLKTVLKDATPAGLDRGQQQVFKGLNKKVKRKKIT-SLERDSILSNLTPTLDYS-GFKNA 415

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185   86 TFIQECTPENLELKKKIFGQLDVIVGDSVILSSSTSCLLPSKLFTGLKHVKQCIVSHPVNPPYFVPLVEIVPHPETDPST 165
Cdd:TIGR02441 416 DMVIEAVFEDLSLKHKVIKEVEAVVPPHCIIASNTSALPIKDIAAVSSRPEKVIGMHYFSPVDKMQLLEIITHDGTSKDT 495

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 542147185  166 TERTYALMKKIGQSPVKLnREIEGFVLNRLQYAVISEAWRLVGEGViSPTDLD 218
Cdd:TIGR02441 496 LASAVAVGLKQGKVVIVV-KDGPGFYTTRCLGPMLAEVIRLLQEGV-DPKKLD 546
 
Name Accession Description Interval E-value
PRK06129 PRK06129
3-hydroxyacyl-CoA dehydrogenase; Validated
 2-310 9.69e-116

3-hydroxyacyl-CoA dehydrogenase; Validated


Pssm-ID: 235706 [Multi-domain]  Cd Length: 308  Bit Score: 336.24  E-value: 9.69e-116
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185   2 EPSQVTIIGSGLIGRSWAMVFAAGGFRVKLYDIAQEQLTTALENIRKQMQEMEKSGVLKGAlSAEQQLALISVCTDLKAA 81
Cdd:PRK06129   1 PMGSVAIIGAGLIGRAWAIVFARAGHEVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGE-APDAVLARIRVTDSLADA 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185  82 VEGATFIQECTPENLELKKKIFGQLDVIVGDSVILSSSTSCLLPSKLFTGLKHVKQCIVSHPVNPPYFVPLVEIVPHPET 161
Cdd:PRK06129  80 VADADYVQESAPENLELKRALFAELDALAPPHAILASSTSALLASAFTEHLAGRERCLVAHPINPPYLIPVVEVVPAPWT 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185 162 DPSTTERTYALMKKIGQSPVKLNREIEGFVLNRLQYAVISEAWRLVGEGVISPTDLDLVMSDGLGMRYAFIGPLETMHLN 241
Cdd:PRK06129 160 APATLARAEALYRAAGQSPVRLRREIDGFVLNRLQGALLREAFRLVADGVASVDDIDAVIRDGLGLRWSFMGPFETIDLN 239

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 542147185 242 A-EGVSSYCERYAEGMKLVLNTFG-PVPeFSGETVQKVNQALSEKIPVapKALDARRKWRDECLTGLAKLK 310
Cdd:PRK06129 240 ApGGVADYAQRYGPMYRRMAAERGqPVP-WDGELVARVEAERRAALPL--DQLAARQAWRDRRLMALAAHR 307
FadB COG1250
3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]; 3-hydroxyacyl-CoA ...
 2-240 3.09e-82

3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]; 3-hydroxyacyl-CoA dehydrogenase is part of the Pathway/BioSystem: Fatty acid biosynthesis


Pssm-ID: 440862 [Multi-domain]  Cd Length: 281  Bit Score: 250.03  E-value: 3.09e-82
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185   2 EPSQVTIIGSGLIGRSWAMVFAAGGFRVKLYDIAQEQLTTALENIRKQMQEMEKSGVLKGAlSAEQQLALISVCTDLkAA 81
Cdd:COG1250    1 EIKKVAVIGAGTMGAGIAAVFANAGYEVVLLDISPEALERARARIAKLLDKLVKKGKLTEE-EADAALARITPTTDL-AA 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185  82 VEGATFIQECTPENLELKKKIFGQLDVIVGDSVILSSSTSCLLPSKLFTGLKHVKQCIVSHPVNPPYFVPLVEIVPHPET 161
Cdd:COG1250   79 LADADLVIEAVPEDLDLKQEVFAELDAVAPPDAILASNTSSLSITELAAATKRPERFIGLHFFNPVPLMPLVEVIRGPAT 158

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 542147185 162 DPSTTERTYALMKKIGQSPVKLNrEIEGFVLNRLQYAVISEAWRLVGEGVISPTDLDLVMSDGLGMRyafIGPLETMHL 240
Cdd:COG1250  159 SDETVATAVAFARRLGKTPVVVK-DTPGFIVNRILVPYLNEAIRLLEEGVASPEDIDAAMRLGFGFP---MGPFELADL 233
3HCDH_N pfam02737
3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; This family also includes lambda ...
 5-184 7.63e-65

3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; This family also includes lambda crystallin.


Pssm-ID: 397037 [Multi-domain]  Cd Length: 180  Bit Score: 202.00  E-value: 7.63e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185    5 QVTIIGSGLIGRSWAMVFAAGGFRVKLYDIAQEQLTTALENIRKQMQEMEKSGVLKgALSAEQQLALISVCTDLKAAVeG 84
Cdd:pfam02737   1 KVAVIGAGTMGAGIAQVFALAGLEVVLVDISEEALEKALERIESSLERLVEKGRIT-EEEVDAALARISFTTDLAAAV-D 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185   85 ATFIQECTPENLELKKKIFGQLDVIVGDSVILSSSTSCLLPSKLFTGLKHVKQCIVSHPVNPPYFVPLVEIVPHPETDPS 164
Cdd:pfam02737  79 ADLVIEAVPENLELKRKLFAELDAIAPPDAILATNTSSLSITELAAATKRPERFIGLHFFNPPPLMPLVEVVRGEKTSPE 158

                         170       180
                  ....*....|....*....|
gi 542147185  165 TTERTYALMKKIGQSPVKLN 184
Cdd:pfam02737 159 TVATTVELAKKIGKTPVVVK 178
PRK06130 PRK06130
3-hydroxybutyryl-CoA dehydrogenase; Validated
 8-248 1.05e-58

3-hydroxybutyryl-CoA dehydrogenase; Validated


Pssm-ID: 235707 [Multi-domain]  Cd Length: 311  Bit Score: 190.75  E-value: 1.05e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185   8 IIGSGLIGRSWAMVFAAGGFRVKLYDIAQEQLTTALENIRKQMqemeksGVLKGALSAEQQLALISVCTDLKAAVEGATF 87
Cdd:PRK06130   9 IIGAGTMGSGIAALFARKGLQVVLIDVMEGALERARGVIERAL------GVYAPLGIASAGMGRIRMEAGLAAAVSGADL 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185  88 IQECTPENLELKKKIFGQLDVIVGDSVILSSSTSCLLPSKLFTGLKHVKQCIVSHPVNPPYFVPLVEIVPHPETDPSTTE 167
Cdd:PRK06130  83 VIEAVPEKLELKRDVFARLDGLCDPDTIFATNTSGLPITAIAQAVTRPERFVGTHFFTPADVIPLVEVVRGDKTSPQTVA 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185 168 RTYALMKKIGQSPVKLNREIEGFVLNRLQYAVISEAWRLVGEGVISPTDLDLVMSDGLGMRYAFIGPLETMHLNA----E 243
Cdd:PRK06130 163 TTMALLRSIGKRPVLVKKDIPGFIANRIQHALAREAISLLEKGVASAEDIDEVVKWSLGIRLALTGPLEQRDMNGldvhL 242


                 ....*
gi 542147185 244 GVSSY 248
Cdd:PRK06130 243 AVASY 247
PRK07531 PRK07531
carnitine 3-dehydrogenase;
3-277 8.96e-53

carnitine 3-dehydrogenase;


Pssm-ID: 236044 [Multi-domain]  Cd Length: 495  Bit Score: 180.32  E-value: 8.96e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185   3 PSQVTIIGSGLIGRSWAMVFAAGGFRVKLYDI---AQEQLTTALENIRKQMqemekSGVLKGALSAEQQLaliSVCTDLK 79
Cdd:PRK07531   4 IMKAACIGGGVIGGGWAARFLLAGIDVAVFDPhpeAERIIGEVLANAERAY-----AMLTDAPLPPEGRL---TFCASLA 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185  80 AAVEGATFIQECTPENLELKKKIFGQLDVIVGDSVILSSSTSCLLPSKLFTGLKHVKQCIVSHPVNPPYFVPLVEIVPHP 159
Cdd:PRK07531  76 EAVAGADWIQESVPERLDLKRRVLAEIDAAARPDALIGSSTSGFLPSDLQEGMTHPERLFVAHPYNPVYLLPLVELVGGG 155

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185 160 ETDPSTTERTYALMKKIGQSPVKLNREIEGFVLNRLQYAVISEAWRLVGEGVISPTDLDLVMSDGLGMRYAFIGPLETMH 239
Cdd:PRK07531 156 KTSPETIRRAKEILREIGMKPVHIAKEIDAFVGDRLLEALWREALWLVKDGIATTEEIDDVIRYSFGLRWAQMGLFETYR 235

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*....
gi 542147185 240 LnAEGVSsyceryaeGMKLVLNTFGP-----------VPEFSGETVQKV 277
Cdd:PRK07531 236 I-AGGEA--------GMRHFLAQFGPclkwpwtklmdVPDLDDALVDKI 275
PRK07066 PRK07066
L-carnitine dehydrogenase;
9-304 2.04e-47

L-carnitine dehydrogenase;


Pssm-ID: 168796 [Multi-domain]  Cd Length: 321  Bit Score: 161.93  E-value: 2.04e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185   9 IGSGLIGRSWAMVFAAGGFRVKLYDIAQEQLTTALENIRKQMQEMEKSGVLKGAlsAEQQLALISVctdLKAAVEGATFI 88
Cdd:PRK07066  13 IGSGVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGA--SPARLRFVAT---IEACVADADFI 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185  89 QECTPENLELKKKIFGQLDVIVGDSVILSSSTSCLLPSKLFTGLKHVKQCIVSHPVNPPYFVPLVEIVPHPETDPSTTER 168
Cdd:PRK07066  88 QESAPEREALKLELHERISRAAKPDAIIASSTSGLLPTDFYARATHPERCVVGHPFNPVYLLPLVEVLGGERTAPEAVDA 167

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185 169 TYALMKKIGQSPVKLNREIEGFVLNRLQYAVISEAWRLVGEGVISPTDLDLVMSDGLGMRYAFIGPLETMHLNA--EGVS 246
Cdd:PRK07066 168 AMGIYRALGMRPLHVRKEVPGFIADRLLEALWREALHLVNEGVATTGEIDDAIRFGAGIRWSFMGTFLTYTLAGgdAGMR 247

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 542147185 247 SYCERYAEGMKLVLnTFGPVPEFSGETVQKVNQALSEKipVAPKALDARRKWRDECLT 304
Cdd:PRK07066 248 HFMQQFGPALELPW-TKLVAPELTDALIDRVVEGTAEQ--QGPRSIKALERYRDECIT 302
PRK05808 PRK05808
3-hydroxybutyryl-CoA dehydrogenase; Validated
 1-235 7.15e-42

3-hydroxybutyryl-CoA dehydrogenase; Validated


Pssm-ID: 180269 [Multi-domain]  Cd Length: 282  Bit Score: 146.26  E-value: 7.15e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185   1 MEPSQVTIIGSGLIGRSWAMVFAAGGFRVKLYDIAQEQLTTALENIRKQMQEMEKsgvlKGALSAEQQ---LALISVCTD 77
Cdd:PRK05808   1 MGIQKIGVIGAGTMGNGIAQVCAVAGYDVVMVDISDAAVDRGLATITKSLDRLVK----KGKMTEADKeaaLARITGTTD 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185  78 LKAAVEgATFIQECTPENLELKKKIFGQLDVIVGDSVILSSSTSCLLPSKLFTGLKHVKQCIVSHPVNPPYFVPLVEIVP 157
Cdd:PRK05808  77 LDDLKD-ADLVIEAATENMDLKKKIFAQLDEIAKPEAILATNTSSLSITELAAATKRPDKVIGMHFFNPVPVMKLVEIIR 155

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 542147185 158 HPETDPSTTERTYALMKKIGQSPVKLNrEIEGFVLNRLQYAVISEAWRLVGEGVISPTDLDLVMSdgLGMRYAfIGPL 235
Cdd:PRK05808 156 GLATSDATHEAVEALAKKIGKTPVEVK-NAPGFVVNRILIPMINEAIFVLAEGVATAEDIDEGMK--LGCNHP-IGPL 229
PRK08269 PRK08269
3-hydroxybutyryl-CoA dehydrogenase; Validated
 14-236 9.22e-41

3-hydroxybutyryl-CoA dehydrogenase; Validated


Pssm-ID: 181340 [Multi-domain]  Cd Length: 314  Bit Score: 144.43  E-value: 9.22e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185  14 IGRSWAMVFAAGGFRVKLYDI------AQEQL-TTALENIRKQMQEMEKSGVLKGAlSAEQQLALISVCT--DLKAAVEG 84
Cdd:PRK08269   1 MGQGIALAFAFAGHDVTLIDFkprdaaGWRALdAEARAEIERTLAALVALGRIDAA-QADAVLARIAVVArdGAADALAD 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185  85 ATFIQECTPENLELKKKIFGQLDVIVGDSVILSSSTSCLLPSKLFTGLKHVKQCIVSHPVNPPYFVPLVEIVPHPETDPS 164
Cdd:PRK08269  80 ADLVFEAVPEVLDAKREALRWLGRHVDADAIIASTTSTFLVTDLQRHVAHPERFLNAHWLNPAYLMPLVEVSPSDATDPA 159

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 542147185 165 TTERTYALMKKIGQSPVKLnREIEGFVLNRLQYAVISEAWRLVGEGVISPTDLDLVMSDGLGMRYAFIGPLE 236
Cdd:PRK08269 160 VVDRLAALLERIGKVPVVC-GPSPGYIVPRIQALAMNEAARMVEEGVASAEDIDKAIRTGFGLRFAVLGLLE 230
PRK08268 PRK08268
3-hydroxy-acyl-CoA dehydrogenase; Validated
 1-246 1.69e-40

3-hydroxy-acyl-CoA dehydrogenase; Validated


Pssm-ID: 236211 [Multi-domain]  Cd Length: 507  Bit Score: 147.69  E-value: 1.69e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185   1 MEPSQVT--IIGSGLIGRSWAMVFAAGGFRVKLYDIAQEQLTTALENIRKQMQEMeksgVLKGALSAEQ---QLALISVC 75
Cdd:PRK08268   3 ALPSIATvaVIGAGAMGAGIAQVAAQAGHTVLLYDARAGAAAAARDGIAARLAKL----VEKGKLTAEQadaALARLRPV 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185  76 TDLkAAVEGATFIQECTPENLELKKKIFGQLDVIVGDSVILSSSTSCLLPSKLFTGLKHVKQCIVSHPVNPpyfVPL--- 152
Cdd:PRK08268  79 EAL-ADLADCDLVVEAIVERLDVKQALFAQLEAIVSPDCILATNTSSLSITAIAAALKHPERVAGLHFFNP---VPLmkl 154

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185 153 VEIVPHPETDPSTTERTYALMKKIGQSPVKLnREIEGFVLNRLQYAVISEAWRLVGEGVISPTDLDLVMSDGLGMRyafI 232
Cdd:PRK08268 155 VEVVSGLATDPAVADALYALARAWGKTPVRA-KDTPGFIVNRAARPYYTEALRVLEEGVADPATIDAILREAAGFR---M 230

                        250
                 ....*....|....
gi 542147185 233 GPLETMHLNAEGVS 246
Cdd:PRK08268 231 GPFELMDLIGLDVN 244
PRK09260 PRK09260
3-hydroxyacyl-CoA dehydrogenase;
5-236 3.94e-40

3-hydroxyacyl-CoA dehydrogenase;


Pssm-ID: 236434 [Multi-domain]  Cd Length: 288  Bit Score: 141.85  E-value: 3.94e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185   5 QVTIIGSGLIGRSWAMVFAAGGFRVKLYDIAQEQLTTAleniRKQMQEMEKSGVLKGALSAEQQ---LALISVCTDLKAA 81
Cdd:PRK09260   3 KLVVVGAGVMGRGIAYVFAVSGFQTTLVDIKQEQLESA----QQEIASIFEQGVARGKLTEAARqaaLARLSYSLDLKAA 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185  82 VEGATFIQECTPENLELKKKIFGQLDVIVGDSVILSSSTSCLLPSKLFTGLKHVKQCIVSHPVNPPYFVPLVEIVPHPET 161
Cdd:PRK09260  79 VADADLVIEAVPEKLELKKAVFETADAHAPAECYIATNTSTMSPTEIASFTKRPERVIAMHFFNPVHKMKLVELIRGLET 158

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 542147185 162 DPSTTERTYALMKKIGQSPVKLNrEIEGFVLNRLQYAVISEAWRLVGEGVISPTDLDLVMSdgLGMRYAfIGPLE 236
Cdd:PRK09260 159 SDETVQVAKEVAEQMGKETVVVN-EFPGFVTSRISALVGNEAFYMLQEGVATAEDIDKAIR--LGLNFP-MGPLE 229
PLN02545 PLN02545
3-hydroxybutyryl-CoA dehydrogenase
 6-236 2.75e-38

3-hydroxybutyryl-CoA dehydrogenase


Pssm-ID: 215300 [Multi-domain]  Cd Length: 295  Bit Score: 137.17  E-value: 2.75e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185   6 VTIIGSGLIGRSWAMVFAAGGFRVKLYDIAQEQLTTALENIRKQMQEMEKSGVLKGAlSAEQQLALISVCTDLkAAVEGA 85
Cdd:PLN02545   7 VGVVGAGQMGSGIAQLAAAAGMDVWLLDSDPAALSRGLDSISSSLARLVKKGKMSQE-EADATLGRIRCTTNL-EELRDA 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185  86 TFIQECTPENLELKKKIFGQLDVIVGDSVILSSSTSCLLPSKLFTGLKHVKQCIVSHPVNPPYFVPLVEIVPHPETDPST 165
Cdd:PLN02545  85 DFIIEAIVESEDLKKKLFSELDRICKPSAILASNTSSISITRLASATQRPQQVIGMHFMNPPPIMKLVEIIRGADTSDEV 164

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 542147185 166 TERTYALMKKIGQSPVKlNREIEGFVLNRLQYAVISEAWRLVGEGVISPTDLDLVMSDGLGMRyafIGPLE 236
Cdd:PLN02545 165 FDATKALAERFGKTVVC-SQDYPGFIVNRILMPMINEAFYALYTGVASKEDIDTGMKLGTNHP---MGPLH 231
PRK08293 PRK08293
3-hydroxyacyl-CoA dehydrogenase;
1-238 5.46e-36

3-hydroxyacyl-CoA dehydrogenase;


Pssm-ID: 181359 [Multi-domain]  Cd Length: 287  Bit Score: 130.83  E-value: 5.46e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185   1 MEPSQVTIIGSGLIGRSWAMVFAAGGFRVKLYDIAQEQLTTALENIRKQMQEMEKSGVLKGALSAEQQLALISVCTDLKA 80
Cdd:PRK08293   1 MDIKNVTVAGAGVLGSQIAFQTAFHGFDVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITLTTDLAE 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185  81 AVEGATFIQECTPENLELKKKIFGQLDVIVGDSVILSSSTSCLLPSKL--FTGlkHVKQCIVSHPVNPPYFVPLVEIVPH 158
Cdd:PRK08293  81 AVKDADLVIEAVPEDPEIKGDFYEELAKVAPEKTIFATNSSTLLPSQFaeATG--RPEKFLALHFANEIWKNNTAEIMGH 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185 159 PETDPSTTERTYALMKKIGQSPVKLNREIEGFVLNRLQYAVISEAWRLVGEGVISPTDLDLVMSDGLGMRyafIGPLETM 238
Cdd:PRK08293 159 PGTDPEVFDTVVAFAKAIGMVPIVLKKEQPGYILNSLLVPFLSAALALWAKGVADPETIDKTWMIATGAP---MGPFGIL 235
PRK06035 PRK06035
3-hydroxyacyl-CoA dehydrogenase; Validated
 1-240 2.79e-28

3-hydroxyacyl-CoA dehydrogenase; Validated


Pssm-ID: 180361 [Multi-domain]  Cd Length: 291  Bit Score: 110.73  E-value: 2.79e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185   1 MEPSQVTIIGSGLIGRSWAMVFAAGGFRVKLYDIAQEQLTTALENIRKQMQEMeKSGVLKGALS---AEQQLALISVCTD 77
Cdd:PRK06035   1 MDIKVIGVVGSGVMGQGIAQVFARTGYDVTIVDVSEEILKNAMELIESGPYGL-RNLVEKGKMSedeAKAIMARIRTSTS 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185  78 LkAAVEGATFIQECTPENLELKKKIFGQLDVIVGDSVILSSSTSCLLPSKLFTGLKHVKQCIVSHPVNPPYFVPLVEIVP 157
Cdd:PRK06035  80 Y-ESLSDADFIVEAVPEKLDLKRKVFAELERNVSPETIIASNTSGIMIAEIATALERKDRFIGMHWFNPAPVMKLIEVVR 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185 158 HPETDPSTTERTYALMKKIGQSPVKLNrEIEGFVLNRLQYAVISEAWRLVGEGVISPTDLDLVMSdglgMRYAF-IGPLE 236
Cdd:PRK06035 159 AALTSEETFNTTVELSKKIGKIPIEVA-DVPGFFTTRFIEGWLLEAIRSFEIGIATIKDIDEMCK----LAFGFpMGPFE 233


                 ....
gi 542147185 237 TMHL 240
Cdd:PRK06035 234 LMDI 237
PRK07530 PRK07530
3-hydroxybutyryl-CoA dehydrogenase; Validated
 1-236 6.36e-27

3-hydroxybutyryl-CoA dehydrogenase; Validated


Pssm-ID: 181018 [Multi-domain]  Cd Length: 292  Bit Score: 107.02  E-value: 6.36e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185   1 MEPSQVTIIGSGLIGRSWAMVFAAGGFRVKLYDIAQEQLTTALENIRKQMQEMeksgVLKGALSAEQQ---LALISVCTD 77
Cdd:PRK07530   2 MAIKKVGVIGAGQMGNGIAHVCALAGYDVLLNDVSADRLEAGLATINGNLARQ----VAKGKISEEARaaaLARISTATD 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185  78 LkAAVEGATFIQECTPENLELKKKIFGQLDVIVGDSVILSSSTSCLLPSKLFTGLKHVKQCIVSHPVNPpyfVP---LVE 154
Cdd:PRK07530  78 L-EDLADCDLVIEAATEDETVKRKIFAQLCPVLKPEAILATNTSSISITRLASATDRPERFIGIHFMNP---VPvmkLVE 153

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185 155 IVPHPETDPSTTERTYALMKKIGQSPVkLNREIEGFVLNRLQYAVISEAWRLVGEGVISPTDLDLVMSdgLGMRYAfIGP 234
Cdd:PRK07530 154 LIRGIATDEATFEAAKEFVTKLGKTIT-VAEDFPAFIVNRILLPMINEAIYTLYEGVGSVEAIDTAMK--LGANHP-MGP 229


                 ..
gi 542147185 235 LE 236
Cdd:PRK07530 230 LE 231
PRK07819 PRK07819
3-hydroxybutyryl-CoA dehydrogenase; Validated
 5-235 1.32e-23

3-hydroxybutyryl-CoA dehydrogenase; Validated


Pssm-ID: 181133 [Multi-domain]  Cd Length: 286  Bit Score: 97.75  E-value: 1.32e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185   5 QVTIIGSGLIGRSWAMVFAAGGFRVKLYDIAQEQLTTALENIRKQMQEmeksGVLKGALS---AEQQLALISVCTDLkAA 81
Cdd:PRK07819   7 RVGVVGAGQMGAGIAEVCARAGVDVLVFETTEELATAGRNRIEKSLER----AVSRGKLTereRDAALARLRFTTDL-GD 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185  82 VEGATFIQECTPENLELKKKIFGQLDVIVGD-SVILSSSTSCLLPSKLFTGLKHVKQCIVSHPVNPPYFVPLVEIVPHPE 160
Cdd:PRK07819  82 FADRQLVIEAVVEDEAVKTEIFAELDKVVTDpDAVLASNTSSIPIMKLAAATKRPGRVLGLHFFNPVPVLPLVELVPTLV 161

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 542147185 161 TDPSTTERTYALMKKI-GQSPVKlNREIEGFVLNRLQYAVISEAWRLVGEGVISPTDLDLVMSDGLG--MryafiGPL 235
Cdd:PRK07819 162 TSEATVARAEEFASDVlGKQVVR-AQDRSGFVVNALLVPYLLSAIRMVESGFATAEDIDKAMVLGCAhpM-----GPL 233
fadJ PRK11154
fatty acid oxidation complex subunit alpha FadJ;
6-211 1.36e-16

fatty acid oxidation complex subunit alpha FadJ;


Pssm-ID: 236864 [Multi-domain]  Cd Length: 708  Bit Score: 80.33  E-value: 1.36e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185   6 VTIIGSGLIGRSWAMVFAA-GGFRVKLYDIAQEQLTTALENIRKQMQEMEKSGVLKgALSAEQQLALISVCTDLKAaVEG 84
Cdd:PRK11154 312 VGVLGGGLMGGGIAYVTATkAGLPVRIKDINPQGINHALKYSWDLLDKKVKRRHLK-PSERDKQMALISGTTDYRG-FKH 389

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185  85 ATFIQECTPENLELKKKIFGQLDVIVGDSVILSSSTSCLLPSKLFTGLKHVKQCIVSHPVNPPYFVPLVEIVPHPETDPS 164
Cdd:PRK11154 390 ADVVIEAVFEDLALKQQMVAEVEQNCAPHTIFASNTSSLPIGQIAAAAARPEQVIGLHYFSPVEKMPLVEVIPHAKTSAE 469

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*..
gi 542147185 165 TTERTYALMKKIGQSPVKLnREIEGFVLNRLQYAVISEAWRLVGEGV 211
Cdd:PRK11154 470 TIATTVALAKKQGKTPIVV-RDGAGFYVNRILAPYINEAARLLLEGE 515
3HCDH pfam00725
3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; This family also includes lambda ...
 189-241 1.21e-15

3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; This family also includes lambda crystallin. Some proteins include two copies of this domain.


Pssm-ID: 395588 [Multi-domain]  Cd Length: 97  Bit Score: 71.09  E-value: 1.21e-15
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 542147185  189 GFVLNRLQYAVISEAWRLVGEGVISPTDLDLVMSDGLGMRYAFIGPLETMHLN 241
Cdd:pfam00725   1 GFVVNRLLAPYLNEAIRLVEEGVATPEDIDAAMRLGLGLPMGPFELSDLVGLD 53
fa_ox_alpha_mit TIGR02441
fatty acid oxidation complex, alpha subunit, mitochondrial; Members represent alpha subunit of ...
 6-218 4.16e-14

fatty acid oxidation complex, alpha subunit, mitochondrial; Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) _ 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human (SP:P40939), pig (SP:Q29554), and rat (SP:Q64428). The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).


Pssm-ID: 131494 [Multi-domain]  Cd Length: 737  Bit Score: 72.95  E-value: 4.16e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185    6 VTIIGSGLIGRSWAMVFAAGGFRVKLYDIAQEQLTTALENIRKQMQEMEKSGVLKgALSAEQQLALISVCTDLKaAVEGA 85
Cdd:TIGR02441 338 LAVLGAGLMGAGIAQVSVDKGLKTVLKDATPAGLDRGQQQVFKGLNKKVKRKKIT-SLERDSILSNLTPTLDYS-GFKNA 415

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185   86 TFIQECTPENLELKKKIFGQLDVIVGDSVILSSSTSCLLPSKLFTGLKHVKQCIVSHPVNPPYFVPLVEIVPHPETDPST 165
Cdd:TIGR02441 416 DMVIEAVFEDLSLKHKVIKEVEAVVPPHCIIASNTSALPIKDIAAVSSRPEKVIGMHYFSPVDKMQLLEIITHDGTSKDT 495

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 542147185  166 TERTYALMKKIGQSPVKLnREIEGFVLNRLQYAVISEAWRLVGEGViSPTDLD 218
Cdd:TIGR02441 496 LASAVAVGLKQGKVVIVV-KDGPGFYTTRCLGPMLAEVIRLLQEGV-DPKKLD 546
TyrA COG0287
Prephenate dehydrogenase [Amino acid transport and metabolism]; Prephenate dehydrogenase is ...
 5-93 9.04e-04

Prephenate dehydrogenase [Amino acid transport and metabolism]; Prephenate dehydrogenase is part of the Pathway/BioSystem: Aromatic amino acid biosynthesis


Pssm-ID: 440056 [Multi-domain]  Cd Length: 278  Bit Score: 40.11  E-value: 9.04e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185   5 QVTIIGSGLIGRSWAMVFAAGGF--RVKLYDIAQEQLTTALEnirkqmqemeksgvlkgalsaeqqLALI-SVCTDLKAA 81
Cdd:COG0287    3 RIAIIGLGLIGGSLALALKRAGLahEVVGVDRSPETLERALE------------------------LGVIdRAATDLEEA 58

                         90
                 ....*....|..
gi 542147185  82 VEGATFIQECTP 93
Cdd:COG0287   59 VADADLVVLAVP 70
PRK08268 PRK08268
3-hydroxy-acyl-CoA dehydrogenase; Validated
 151-236 3.51e-03

3-hydroxy-acyl-CoA dehydrogenase; Validated


Pssm-ID: 236211 [Multi-domain]  Cd Length: 507  Bit Score: 39.06  E-value: 3.51e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542147185 151 PLVEIVPHPETDPSTTERTYALMKKIGQsPVKLNREIEGFVLNRLQYAVISEAWRLVGEGVISPTDLDLVMSDGLGmrYA 230
Cdd:PRK08268 379 KRRTLMAAPATSPAARDAAHALFQQDGK-AVSVIRDSPGFVAQRTVAMIVNEAADIAQQGIASPADIDLAMRLGLN--YP 455


                 ....*.
gi 542147185 231 FiGPLE 236
Cdd:PRK08268 456 L-GPLA 460
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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