NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|511926625|ref|XP_004782432|]
View 

X antigen family member 3-like isoform X2 [Mustela putorius furo]

Protein Classification

GAGE domain-containing protein( domain architecture ID 10530748)

GAGE domain-containing protein

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
GAGE pfam05831
GAGE protein; This family consists of several GAGE and XAGE proteins which are found ...
 1-103 3.94e-30

GAGE protein; This family consists of several GAGE and XAGE proteins which are found exclusively in humans. The function of this family is unknown although they have been implicated in human cancers.


:

Pssm-ID: 461753  Cd Length: 107  Bit Score: 103.61  E-value: 3.94e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511926625    1 MSGRARSRSKPK-RKDDPGSTQRVGT---QKPRVEKPKQKEAPPESRDMKPEPGKEVEAPPAAQGPDLKADLQKLPQAEA 76
Cdd:pfam05831   1 MSGRVRSRSRSRgRGDDQESSQLVGPvvaQQPSDEQPQQEEPPTESQDITPGQEREDEGASAIQGPELEADLQELALEKT 80

                          90       100
                  ....*....|....*....|....*..
gi 511926625   77 GRVTGYHPGVKGRNLPFLEPIKMPRAG 103
Cdd:pfam05831  81 GGERGDGPDVKGKTLPNLEPVKMPEAG 107
 
Name Accession Description Interval E-value
GAGE pfam05831
GAGE protein; This family consists of several GAGE and XAGE proteins which are found ...
 1-103 3.94e-30

GAGE protein; This family consists of several GAGE and XAGE proteins which are found exclusively in humans. The function of this family is unknown although they have been implicated in human cancers.


Pssm-ID: 461753  Cd Length: 107  Bit Score: 103.61  E-value: 3.94e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511926625    1 MSGRARSRSKPK-RKDDPGSTQRVGT---QKPRVEKPKQKEAPPESRDMKPEPGKEVEAPPAAQGPDLKADLQKLPQAEA 76
Cdd:pfam05831   1 MSGRVRSRSRSRgRGDDQESSQLVGPvvaQQPSDEQPQQEEPPTESQDITPGQEREDEGASAIQGPELEADLQELALEKT 80

                          90       100
                  ....*....|....*....|....*..
gi 511926625   77 GRVTGYHPGVKGRNLPFLEPIKMPRAG 103
Cdd:pfam05831  81 GGERGDGPDVKGKTLPNLEPVKMPEAG 107
 
Name Accession Description Interval E-value
GAGE pfam05831
GAGE protein; This family consists of several GAGE and XAGE proteins which are found ...
 1-103 3.94e-30

GAGE protein; This family consists of several GAGE and XAGE proteins which are found exclusively in humans. The function of this family is unknown although they have been implicated in human cancers.


Pssm-ID: 461753  Cd Length: 107  Bit Score: 103.61  E-value: 3.94e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511926625    1 MSGRARSRSKPK-RKDDPGSTQRVGT---QKPRVEKPKQKEAPPESRDMKPEPGKEVEAPPAAQGPDLKADLQKLPQAEA 76
Cdd:pfam05831   1 MSGRVRSRSRSRgRGDDQESSQLVGPvvaQQPSDEQPQQEEPPTESQDITPGQEREDEGASAIQGPELEADLQELALEKT 80

                          90       100
                  ....*....|....*....|....*..
gi 511926625   77 GRVTGYHPGVKGRNLPFLEPIKMPRAG 103
Cdd:pfam05831  81 GGERGDGPDVKGKTLPNLEPVKMPEAG 107
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH