NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|472366648|ref|XP_004402861|]
View 

PREDICTED: sulfate transporter [Odobenus rosmarus divergens]

Protein Classification

solute carrier family 26 protein( domain architecture ID 11489705)

solute carrier family 26 protein similar to eukaryotic sulfate transporters such as Arabidopsis thaliana sulfate transporter 1.1, which is a high-affinity H(+)/sulfate cotransporter that mediates the uptake of the environmental sulfate by plant roots under low-sulfur conditions

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
sulP TIGR00815
high affinity sulphate transporter 1; The SulP family is a large and ubiquitous family with ...
96-718 0e+00

high affinity sulphate transporter 1; The SulP family is a large and ubiquitous family with over 30 sequenced members derived from bacteria, fungi, plants and animals. Many organisms including Bacillus subtilis, Synechocystis sp, Saccharomyces cerevisiae, Arabidopsis thaliana and Caenorhabditis elegans possess multiple SulP family paralogues. Many of these proteins are functionally characterized, and all are sulfate uptake transporters. Some transport their substrate with high affinities, while others transport it with relatively low affinities. Most function by SO42- :H+symport, but SO42- :HCO3- antiport has been reported for the rat protein (spP45380). The bacterial proteins vary in size from 434 residues to 566 residues with one exception, a Mycobacterium tuberculosis protein with 784 residues. The eukaryotic proteins vary in size from 611 residues to 893 residues with one exception, a protein designated "early nodulin 70 protein" from Glycine max which is reported to be of 485 residues. Thus, the eukaryotic proteins are almost without exception larger than the prokaryotic proteins. These proteins exhibit 10-13 putative transmembrane a-helical spanners (TMSs) depending on the protein. The phylogenetic tree for the SulP family reveals five principal branches. Three of these are bacterial specific as follows: one bears a single protein from M. tuberculosis; a second bears two proteins, one from M. tuberculosis, the other from Synechocystis sp, and the third bears all remaining prokaryotic proteins. The remaining two clusters bear only eukaryotic proteins with the animal proteins all localized to one branch and the plant and fungal proteins localized to the other. The generalized transport reactions catalyzed by SulP family proteins are: (1) SO42- (out) + nH+ (out) --> SO42- (in) + nH+ (in). (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out). [Transport and binding proteins, Anions]


:

Pssm-ID: 273284 [Multi-domain]  Cd Length: 552  Bit Score: 665.19  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648   96 PVLQWLPKYDLKKnILGDMMSGLIVGILLVPQSIAYSLLAGQEPIYGLYTSFFASIIYFLLGTSRHISVGIFGILCLMIG 175
Cdd:TIGR00815   1 PVLRWLRKYRLKK-FKGDLMAGLTVGILLIPQAIAYAKLAGLPPIYGLYTSFVPPIIYALFGSSRHIAIGPTASVSLLLG 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648  176 EVVDRELHKAGYDtaqnapshlgmvsngsallnqtsdwlcdrscYAIAVGSTVTFMAGVYQVAMGFFQVGFVSVYLSDAL 255
Cdd:TIGR00815  80 SLVQREGLQGLFD-------------------------------DYIRLAFTATLLAGIFQVIMGLLRLGFLIEYLSHAV 128
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648  256 LSGFVTGASFTILTSQAKYLLGLSL-PRSNGVGSLITTWIQIFRNihkaNLCDLITSLLCLLVLLPTKELNEHFKFKLKA 334
Cdd:TIGR00815 129 LVGFTAGAAITIGLSQLKGLLGLSIfVKTDILGVVISTWASLHQN----NWCTLVIGLLFLLFLLATKELGKRNKKLLWA 204
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648  335 PIPTELIVVVAATLASHFGkLNEKYNTSIAGPIPTG--FMPPKAPDWNLIPSLAVDAIAISIIGFAITVSLSEMFAKKHG 412
Cdd:TIGR00815 205 PAPAPLLVVVLATLIVTIG-LHDSQGVSIVGHIPQGlsFFPPITFTWQHLPTLAPDAIAIAIVGLTESILTARVFAAMTG 283
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648  413 YTVKANQEMYAIGFCNIIPSFFHCFTTSAALAKTLVKESTGCQTQLSGVVTALVLLLVLLVIAPLFYSLQKSVLGVITIV 492
Cdd:TIGR00815 284 YEIDANKELVALGIANIVGSFFSCYPATGSLSRTAVNYKAGCKTQLSAIVMAIVVLLVLLVLAPLFYYIPLAALAAIIIS 363
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648  493 NLRGaLRKFKDLPKMWKVSRMDTVIWFVTMLSSALLSTEIGLLIGVCFSMFCVILRTQKPKTSLLGLVEESETFESVSAY 572
Cdd:TIGR00815 364 AAVG-LIDIRELYLLWKADKMDFVVWLGTFLGVVFTSIEIGLLVGVSLSAFFFILRVARPRAAVLGRIPGTEDYENIEQY 442
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648  573 KNLQTKPGIKIFRFVAPLYYINKECFKSALYKKTlnpilvkaaqkkaakrkitketvilsgiqdevsVQLSYDPlelHTV 652
Cdd:TIGR00815 443 PKAQTPPGILIFRVDGPLYFANAEDLKERLLKWL---------------------------------ETLELDP---QII 486
                         570       580       590       600       610       620
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 472366648  653 VIDCSTIQFLDTAGIHTLKEVRRDYEAIGIRVLLAQCNPSVRDSLACGEYFKEEEENLLFYSVYEA 718
Cdd:TIGR00815 487 ILDMSAVPFLDTSGIHALEELFKELKARGIQLLLANPNPAVISTLARAGFVELIGEEHFFPSVHDA 552
 
Name Accession Description Interval E-value
sulP TIGR00815
high affinity sulphate transporter 1; The SulP family is a large and ubiquitous family with ...
96-718 0e+00

high affinity sulphate transporter 1; The SulP family is a large and ubiquitous family with over 30 sequenced members derived from bacteria, fungi, plants and animals. Many organisms including Bacillus subtilis, Synechocystis sp, Saccharomyces cerevisiae, Arabidopsis thaliana and Caenorhabditis elegans possess multiple SulP family paralogues. Many of these proteins are functionally characterized, and all are sulfate uptake transporters. Some transport their substrate with high affinities, while others transport it with relatively low affinities. Most function by SO42- :H+symport, but SO42- :HCO3- antiport has been reported for the rat protein (spP45380). The bacterial proteins vary in size from 434 residues to 566 residues with one exception, a Mycobacterium tuberculosis protein with 784 residues. The eukaryotic proteins vary in size from 611 residues to 893 residues with one exception, a protein designated "early nodulin 70 protein" from Glycine max which is reported to be of 485 residues. Thus, the eukaryotic proteins are almost without exception larger than the prokaryotic proteins. These proteins exhibit 10-13 putative transmembrane a-helical spanners (TMSs) depending on the protein. The phylogenetic tree for the SulP family reveals five principal branches. Three of these are bacterial specific as follows: one bears a single protein from M. tuberculosis; a second bears two proteins, one from M. tuberculosis, the other from Synechocystis sp, and the third bears all remaining prokaryotic proteins. The remaining two clusters bear only eukaryotic proteins with the animal proteins all localized to one branch and the plant and fungal proteins localized to the other. The generalized transport reactions catalyzed by SulP family proteins are: (1) SO42- (out) + nH+ (out) --> SO42- (in) + nH+ (in). (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out). [Transport and binding proteins, Anions]


Pssm-ID: 273284 [Multi-domain]  Cd Length: 552  Bit Score: 665.19  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648   96 PVLQWLPKYDLKKnILGDMMSGLIVGILLVPQSIAYSLLAGQEPIYGLYTSFFASIIYFLLGTSRHISVGIFGILCLMIG 175
Cdd:TIGR00815   1 PVLRWLRKYRLKK-FKGDLMAGLTVGILLIPQAIAYAKLAGLPPIYGLYTSFVPPIIYALFGSSRHIAIGPTASVSLLLG 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648  176 EVVDRELHKAGYDtaqnapshlgmvsngsallnqtsdwlcdrscYAIAVGSTVTFMAGVYQVAMGFFQVGFVSVYLSDAL 255
Cdd:TIGR00815  80 SLVQREGLQGLFD-------------------------------DYIRLAFTATLLAGIFQVIMGLLRLGFLIEYLSHAV 128
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648  256 LSGFVTGASFTILTSQAKYLLGLSL-PRSNGVGSLITTWIQIFRNihkaNLCDLITSLLCLLVLLPTKELNEHFKFKLKA 334
Cdd:TIGR00815 129 LVGFTAGAAITIGLSQLKGLLGLSIfVKTDILGVVISTWASLHQN----NWCTLVIGLLFLLFLLATKELGKRNKKLLWA 204
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648  335 PIPTELIVVVAATLASHFGkLNEKYNTSIAGPIPTG--FMPPKAPDWNLIPSLAVDAIAISIIGFAITVSLSEMFAKKHG 412
Cdd:TIGR00815 205 PAPAPLLVVVLATLIVTIG-LHDSQGVSIVGHIPQGlsFFPPITFTWQHLPTLAPDAIAIAIVGLTESILTARVFAAMTG 283
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648  413 YTVKANQEMYAIGFCNIIPSFFHCFTTSAALAKTLVKESTGCQTQLSGVVTALVLLLVLLVIAPLFYSLQKSVLGVITIV 492
Cdd:TIGR00815 284 YEIDANKELVALGIANIVGSFFSCYPATGSLSRTAVNYKAGCKTQLSAIVMAIVVLLVLLVLAPLFYYIPLAALAAIIIS 363
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648  493 NLRGaLRKFKDLPKMWKVSRMDTVIWFVTMLSSALLSTEIGLLIGVCFSMFCVILRTQKPKTSLLGLVEESETFESVSAY 572
Cdd:TIGR00815 364 AAVG-LIDIRELYLLWKADKMDFVVWLGTFLGVVFTSIEIGLLVGVSLSAFFFILRVARPRAAVLGRIPGTEDYENIEQY 442
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648  573 KNLQTKPGIKIFRFVAPLYYINKECFKSALYKKTlnpilvkaaqkkaakrkitketvilsgiqdevsVQLSYDPlelHTV 652
Cdd:TIGR00815 443 PKAQTPPGILIFRVDGPLYFANAEDLKERLLKWL---------------------------------ETLELDP---QII 486
                         570       580       590       600       610       620
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 472366648  653 VIDCSTIQFLDTAGIHTLKEVRRDYEAIGIRVLLAQCNPSVRDSLACGEYFKEEEENLLFYSVYEA 718
Cdd:TIGR00815 487 ILDMSAVPFLDTSGIHALEELFKELKARGIQLLLANPNPAVISTLARAGFVELIGEEHFFPSVHDA 552
Sulfate_transp pfam00916
Sulfate permease family; This family of integral membrane proteins are known as the Sulfate ...
110-521 1.02e-134

Sulfate permease family; This family of integral membrane proteins are known as the Sulfate Permease (SulP) family. SulP is a large family found in all domains of life. Although sulfate is a commonly transported ion there are many other activities in this family. See the TCDB description for a comprehensive summary.


Pssm-ID: 459995 [Multi-domain]  Cd Length: 379  Bit Score: 402.78  E-value: 1.02e-134
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648  110 ILGDMMSGLIVGILLVPQSIAYSLLAGQEPIYGLYTSFFASIIYFLLGTSRHISVGIFGILCLMIGEVVDRELHKagydt 189
Cdd:pfam00916   1 LKGDLIAGITVAILAIPQALAYAILAGLPPIYGLYSSFVPGFVYALFGTSRHLAIGPVAVLSLMVGAAIAKLAAK----- 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648  190 aqnapshlgmvsngsallnqtsdwlcdRSCYAIAVGSTVTFMAGVYQVAMGFFQVGFVSVYLSDALLSGFVTGASFTILT 269
Cdd:pfam00916  76 ---------------------------DPELGIALAFTLTFLAGIIQLALGLLRLGFLVTFLSHAVISGFMGGAAIVILL 128
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648  270 SQAKYLLGLSLprSNGVGSLITTWIQIFRNIHKANLCDLITSLLCLLVLLPTKELNEHFKFKLKAPIPTELIVVVAATLA 349
Cdd:pfam00916 129 SQLKVLLGLTN--FSGPGYVVSVLQSLFTNLDKVNLATLVLGLLVLVILLFTKELGKKYKKLFWIPAPAPLVAVVLATLV 206
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648  350 SHFGKLNEKYNTSIAGPIPTGFMPPKAP--DWNLIPSLAVDAIAISIIGFAITVSLSEMFAKKHGYTVKANQEMYAIGFC 427
Cdd:pfam00916 207 SAIFDLLRRYGVKIVGEIPSGLPPFSLPkfSWSLLSALLPDALAIAIVGLLEAIAISKSFAKKKGYEVDSNQELVALGFA 286
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648  428 NIIPSFFHCFTTSAALAKTLVKESTGCQTQLSGVVTALVLLLVLLVIAPLFYSLQKSVLGVITIVNLRGaLRKFKDLPKM 507
Cdd:pfam00916 287 NILSGLFGGYPATGAFSRSAVNIKAGAKTPLSGIIMAVIVLLVLLFLTPLFAYIPKAVLAAIIIVAGKG-LIDYRELKHL 365
                         410
                  ....*....|....
gi 472366648  508 WKVSRMDTVIWFVT 521
Cdd:pfam00916 366 WRLSKLDFLIWLAT 379
SUL1 COG0659
Sulfate permease or related transporter, MFS superfamily [Inorganic ion transport and ...
107-723 2.47e-87

Sulfate permease or related transporter, MFS superfamily [Inorganic ion transport and metabolism];


Pssm-ID: 440424 [Multi-domain]  Cd Length: 529  Bit Score: 284.69  E-value: 2.47e-87
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648 107 KKNILGDMMSGLIVGILLVPQSIAYSLLAGQEPIYGLYTSFFASIIYFLLGTSRHISVGIFGILCLMIGEVVdrelhkAG 186
Cdd:COG0659    4 RSNLRGDLLAGLTVALVALPLALAFAIAAGLPPEAGLYAAIVGGIVYALFGGSRLLISGPTAALAVVVAAAV------AP 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648 187 YDTAQNApshlgmvsngsallnqtsdwlcdrscyaiavgSTVTFMAGVYQVAMGFFQVGFVSVYLSDALLSGFVTGASFT 266
Cdd:COG0659   78 LGSLALL--------------------------------LAATLLAGVLQLLLGLLRLGRLARFIPRPVIVGFLAGIAIL 125
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648 267 ILTSQAKYLLGLSLPRsngvGSLITTWIQIFRNIHKANLCDLITSLLCLLVLLPTKelnehfkfKLKAPIPTELIVVVAA 346
Cdd:COG0659  126 IILGQLPHLLGLPAPG----GSFLEKLAALLAALGEINPPTLALGLLTLAILLLLP--------RLLKRIPGPLVAVVLG 193
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648 347 TLASHFGKLNekynTSIAGPIPTGFMPPKAPDWNL--IPSLAVDAIAISIIGFAITVSLSEMFAKKHGYTVKANQEMYAI 424
Cdd:COG0659  194 TLLVWLLGLD----VATVGEIPSGLPSFSLPDFSLetLRALLPPALTIALVGSIESLLTARAVDAMTGTRSDPNRELIAQ 269
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648 425 GFCNIIPSFFHCFTTSAALAKTLVKESTGCQTQLSGVVTALVLLLVLLVIAPLFYSLQKSVL-GVITIVNLRgaLRKFKD 503
Cdd:COG0659  270 GLANIASGLFGGLPVTGSISRSAVNVKAGARTRLSGIVHALFLLLVLLFLAPLLAYIPLAALaAILIVVGIG--LIDWRS 347
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648 504 LPKMWKVSRMDTVIWFVTMLSSALLSTEIGLLIGVCFSMFCVILRTQKPKTSLlgLVEESETFESVSAYKNLQTKPGIKI 583
Cdd:COG0659  348 FRRLWRAPRSDFLVMLVTFLVTVFTDLLIGVLVGVLLSLLLFLRRVSRPHVVV--LRVPGTHFRNVERHPEAETGPGVLV 425
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648 584 FRFVAPLYYINKECFKSALYKktlnpilvkaaqkkaakrkitketvilsgIQDEVSVqlsydplelhtVVIDCSTIQFLD 663
Cdd:COG0659  426 YRLDGPLFFGNAERLKERLDA-----------------------------LAPDPRV-----------VILDLSAVPFID 465
                        570       580       590       600       610       620
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648 664 TAGIHTLKEVRRDYEAIGIRVLLAQCNPSVRDSLACGEYFKEEEENLLFYSVYEAVAFAE 723
Cdd:COG0659  466 ATALEALEELAERLRARGITLELAGLKPPVRDLLERAGLLDELGEERVFPDLDEALEAAE 525
STAS cd06844
Sulphate Transporter and Anti-Sigma factor antagonist domain found in the C-terminal region of ...
573-710 2.55e-33

Sulphate Transporter and Anti-Sigma factor antagonist domain found in the C-terminal region of sulphate transporters as well as in bacterial and archaeal proteins involved in the regulation of sigma factors; The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain is found in the C-terminal region of sulphate transporters as well as in bacterial and archaeal proteins involved in the regulation of sigma factors, like anti-anti-sigma factors and "stressosome" components. The sigma factor regulators are involved in protein-protein interaction which is regulated by phosphorylation.


Pssm-ID: 132911 [Multi-domain]  Cd Length: 100  Bit Score: 123.36  E-value: 2.55e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648 573 KNLQTKPGIKIFRFVAPLYYINKECFKSALYKKTLNPILvkaaqkkaakrkitketvilsgiqdevsvqlsydplelHTV 652
Cdd:cd06844    1 VPLEKVDDYWVVRLEGELDHHSVEQFKEELLHNITNVAG--------------------------------------KTI 42
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 472366648 653 VIDCSTIQFLDTAGIHTLKEVRRDYEAIGIRVLLAQCNPSVRDSLACGEYFKEEEENL 710
Cdd:cd06844   43 VIDISALEFMDSSGTGVLLERSRLAEAVGGQFVLTGISPAVRITLTESGLDKG*ATAL 100
PRK11660 PRK11660
putative transporter; Provisional
100-460 1.55e-15

putative transporter; Provisional


Pssm-ID: 183265 [Multi-domain]  Cd Length: 568  Bit Score: 80.38  E-value: 1.55e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648 100 WLPKYDLKKnILGDMMSGLIVGILLVPQSIAYSLLAGQEPIYGLYTSFFASIIYFLLGTSRhisVGIFG-------ILcl 172
Cdd:PRK11660  20 WKEKYTAAR-FTRDLIAGITVGIIAIPLAMALAIASGVPPQYGLYTAAVAGIVIALTGGSR---FSVSGptaafvvIL-- 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648 173 migevvdrelhkagYDTAQnapsHLGMvsngSALLnqtsdwlcdrscyaIAvgstvTFMAGVYQVAMGFFQVGFVSVYLS 252
Cdd:PRK11660  94 --------------YPVSQ----QFGL----AGLL--------------VA-----TLMSGIILILMGLARLGRLIEYIP 132
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648 253 DALLSGFVTGASFTILTSQAKYLLGLSLPR--SNGVGSLITtwiqIFRNIHKANLCDLITSLLCLLVLLptkelnehFKF 330
Cdd:PRK11660 133 LSVTLGFTSGIGIVIATLQIKDFFGLQMAHvpEHYLEKVGA----LFQALPTINWGDALIGIVTLGVLI--------LWP 200
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648 331 KLKAPIPTELIVVVAATLAS----HFG----KLNEKYNTSIA-GPIPTGfMPPKAPD------------------WNLIP 383
Cdd:PRK11660 201 RLKIRLPGHLPALLAGTAVMgvlnLLGghvaTIGSRFHYVLAdGSQGNG-IPPLLPQfvlpwnlpgadgqpftlsWDLIR 279
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648 384 SLAVDAIAISIIGfAI-----TVSLSEMFAKKHgytvKANQEMYAIGFCNIIPSFFHCFTTSAALAKTLVKESTGCQTQL 458
Cdd:PRK11660 280 ALLPAAFSMAMLG-AIesllcAVVLDGMTGTKH----SANSELVGQGLGNIVAPFFGGITATAAIARSAANVRAGATSPI 354

                 ..
gi 472366648 459 SG 460
Cdd:PRK11660 355 SA 356
 
Name Accession Description Interval E-value
sulP TIGR00815
high affinity sulphate transporter 1; The SulP family is a large and ubiquitous family with ...
96-718 0e+00

high affinity sulphate transporter 1; The SulP family is a large and ubiquitous family with over 30 sequenced members derived from bacteria, fungi, plants and animals. Many organisms including Bacillus subtilis, Synechocystis sp, Saccharomyces cerevisiae, Arabidopsis thaliana and Caenorhabditis elegans possess multiple SulP family paralogues. Many of these proteins are functionally characterized, and all are sulfate uptake transporters. Some transport their substrate with high affinities, while others transport it with relatively low affinities. Most function by SO42- :H+symport, but SO42- :HCO3- antiport has been reported for the rat protein (spP45380). The bacterial proteins vary in size from 434 residues to 566 residues with one exception, a Mycobacterium tuberculosis protein with 784 residues. The eukaryotic proteins vary in size from 611 residues to 893 residues with one exception, a protein designated "early nodulin 70 protein" from Glycine max which is reported to be of 485 residues. Thus, the eukaryotic proteins are almost without exception larger than the prokaryotic proteins. These proteins exhibit 10-13 putative transmembrane a-helical spanners (TMSs) depending on the protein. The phylogenetic tree for the SulP family reveals five principal branches. Three of these are bacterial specific as follows: one bears a single protein from M. tuberculosis; a second bears two proteins, one from M. tuberculosis, the other from Synechocystis sp, and the third bears all remaining prokaryotic proteins. The remaining two clusters bear only eukaryotic proteins with the animal proteins all localized to one branch and the plant and fungal proteins localized to the other. The generalized transport reactions catalyzed by SulP family proteins are: (1) SO42- (out) + nH+ (out) --> SO42- (in) + nH+ (in). (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out). [Transport and binding proteins, Anions]


Pssm-ID: 273284 [Multi-domain]  Cd Length: 552  Bit Score: 665.19  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648   96 PVLQWLPKYDLKKnILGDMMSGLIVGILLVPQSIAYSLLAGQEPIYGLYTSFFASIIYFLLGTSRHISVGIFGILCLMIG 175
Cdd:TIGR00815   1 PVLRWLRKYRLKK-FKGDLMAGLTVGILLIPQAIAYAKLAGLPPIYGLYTSFVPPIIYALFGSSRHIAIGPTASVSLLLG 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648  176 EVVDRELHKAGYDtaqnapshlgmvsngsallnqtsdwlcdrscYAIAVGSTVTFMAGVYQVAMGFFQVGFVSVYLSDAL 255
Cdd:TIGR00815  80 SLVQREGLQGLFD-------------------------------DYIRLAFTATLLAGIFQVIMGLLRLGFLIEYLSHAV 128
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648  256 LSGFVTGASFTILTSQAKYLLGLSL-PRSNGVGSLITTWIQIFRNihkaNLCDLITSLLCLLVLLPTKELNEHFKFKLKA 334
Cdd:TIGR00815 129 LVGFTAGAAITIGLSQLKGLLGLSIfVKTDILGVVISTWASLHQN----NWCTLVIGLLFLLFLLATKELGKRNKKLLWA 204
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648  335 PIPTELIVVVAATLASHFGkLNEKYNTSIAGPIPTG--FMPPKAPDWNLIPSLAVDAIAISIIGFAITVSLSEMFAKKHG 412
Cdd:TIGR00815 205 PAPAPLLVVVLATLIVTIG-LHDSQGVSIVGHIPQGlsFFPPITFTWQHLPTLAPDAIAIAIVGLTESILTARVFAAMTG 283
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648  413 YTVKANQEMYAIGFCNIIPSFFHCFTTSAALAKTLVKESTGCQTQLSGVVTALVLLLVLLVIAPLFYSLQKSVLGVITIV 492
Cdd:TIGR00815 284 YEIDANKELVALGIANIVGSFFSCYPATGSLSRTAVNYKAGCKTQLSAIVMAIVVLLVLLVLAPLFYYIPLAALAAIIIS 363
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648  493 NLRGaLRKFKDLPKMWKVSRMDTVIWFVTMLSSALLSTEIGLLIGVCFSMFCVILRTQKPKTSLLGLVEESETFESVSAY 572
Cdd:TIGR00815 364 AAVG-LIDIRELYLLWKADKMDFVVWLGTFLGVVFTSIEIGLLVGVSLSAFFFILRVARPRAAVLGRIPGTEDYENIEQY 442
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648  573 KNLQTKPGIKIFRFVAPLYYINKECFKSALYKKTlnpilvkaaqkkaakrkitketvilsgiqdevsVQLSYDPlelHTV 652
Cdd:TIGR00815 443 PKAQTPPGILIFRVDGPLYFANAEDLKERLLKWL---------------------------------ETLELDP---QII 486
                         570       580       590       600       610       620
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 472366648  653 VIDCSTIQFLDTAGIHTLKEVRRDYEAIGIRVLLAQCNPSVRDSLACGEYFKEEEENLLFYSVYEA 718
Cdd:TIGR00815 487 ILDMSAVPFLDTSGIHALEELFKELKARGIQLLLANPNPAVISTLARAGFVELIGEEHFFPSVHDA 552
Sulfate_transp pfam00916
Sulfate permease family; This family of integral membrane proteins are known as the Sulfate ...
110-521 1.02e-134

Sulfate permease family; This family of integral membrane proteins are known as the Sulfate Permease (SulP) family. SulP is a large family found in all domains of life. Although sulfate is a commonly transported ion there are many other activities in this family. See the TCDB description for a comprehensive summary.


Pssm-ID: 459995 [Multi-domain]  Cd Length: 379  Bit Score: 402.78  E-value: 1.02e-134
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648  110 ILGDMMSGLIVGILLVPQSIAYSLLAGQEPIYGLYTSFFASIIYFLLGTSRHISVGIFGILCLMIGEVVDRELHKagydt 189
Cdd:pfam00916   1 LKGDLIAGITVAILAIPQALAYAILAGLPPIYGLYSSFVPGFVYALFGTSRHLAIGPVAVLSLMVGAAIAKLAAK----- 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648  190 aqnapshlgmvsngsallnqtsdwlcdRSCYAIAVGSTVTFMAGVYQVAMGFFQVGFVSVYLSDALLSGFVTGASFTILT 269
Cdd:pfam00916  76 ---------------------------DPELGIALAFTLTFLAGIIQLALGLLRLGFLVTFLSHAVISGFMGGAAIVILL 128
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648  270 SQAKYLLGLSLprSNGVGSLITTWIQIFRNIHKANLCDLITSLLCLLVLLPTKELNEHFKFKLKAPIPTELIVVVAATLA 349
Cdd:pfam00916 129 SQLKVLLGLTN--FSGPGYVVSVLQSLFTNLDKVNLATLVLGLLVLVILLFTKELGKKYKKLFWIPAPAPLVAVVLATLV 206
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648  350 SHFGKLNEKYNTSIAGPIPTGFMPPKAP--DWNLIPSLAVDAIAISIIGFAITVSLSEMFAKKHGYTVKANQEMYAIGFC 427
Cdd:pfam00916 207 SAIFDLLRRYGVKIVGEIPSGLPPFSLPkfSWSLLSALLPDALAIAIVGLLEAIAISKSFAKKKGYEVDSNQELVALGFA 286
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648  428 NIIPSFFHCFTTSAALAKTLVKESTGCQTQLSGVVTALVLLLVLLVIAPLFYSLQKSVLGVITIVNLRGaLRKFKDLPKM 507
Cdd:pfam00916 287 NILSGLFGGYPATGAFSRSAVNIKAGAKTPLSGIIMAVIVLLVLLFLTPLFAYIPKAVLAAIIIVAGKG-LIDYRELKHL 365
                         410
                  ....*....|....
gi 472366648  508 WKVSRMDTVIWFVT 521
Cdd:pfam00916 366 WRLSKLDFLIWLAT 379
SUL1 COG0659
Sulfate permease or related transporter, MFS superfamily [Inorganic ion transport and ...
107-723 2.47e-87

Sulfate permease or related transporter, MFS superfamily [Inorganic ion transport and metabolism];


Pssm-ID: 440424 [Multi-domain]  Cd Length: 529  Bit Score: 284.69  E-value: 2.47e-87
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648 107 KKNILGDMMSGLIVGILLVPQSIAYSLLAGQEPIYGLYTSFFASIIYFLLGTSRHISVGIFGILCLMIGEVVdrelhkAG 186
Cdd:COG0659    4 RSNLRGDLLAGLTVALVALPLALAFAIAAGLPPEAGLYAAIVGGIVYALFGGSRLLISGPTAALAVVVAAAV------AP 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648 187 YDTAQNApshlgmvsngsallnqtsdwlcdrscyaiavgSTVTFMAGVYQVAMGFFQVGFVSVYLSDALLSGFVTGASFT 266
Cdd:COG0659   78 LGSLALL--------------------------------LAATLLAGVLQLLLGLLRLGRLARFIPRPVIVGFLAGIAIL 125
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648 267 ILTSQAKYLLGLSLPRsngvGSLITTWIQIFRNIHKANLCDLITSLLCLLVLLPTKelnehfkfKLKAPIPTELIVVVAA 346
Cdd:COG0659  126 IILGQLPHLLGLPAPG----GSFLEKLAALLAALGEINPPTLALGLLTLAILLLLP--------RLLKRIPGPLVAVVLG 193
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648 347 TLASHFGKLNekynTSIAGPIPTGFMPPKAPDWNL--IPSLAVDAIAISIIGFAITVSLSEMFAKKHGYTVKANQEMYAI 424
Cdd:COG0659  194 TLLVWLLGLD----VATVGEIPSGLPSFSLPDFSLetLRALLPPALTIALVGSIESLLTARAVDAMTGTRSDPNRELIAQ 269
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648 425 GFCNIIPSFFHCFTTSAALAKTLVKESTGCQTQLSGVVTALVLLLVLLVIAPLFYSLQKSVL-GVITIVNLRgaLRKFKD 503
Cdd:COG0659  270 GLANIASGLFGGLPVTGSISRSAVNVKAGARTRLSGIVHALFLLLVLLFLAPLLAYIPLAALaAILIVVGIG--LIDWRS 347
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648 504 LPKMWKVSRMDTVIWFVTMLSSALLSTEIGLLIGVCFSMFCVILRTQKPKTSLlgLVEESETFESVSAYKNLQTKPGIKI 583
Cdd:COG0659  348 FRRLWRAPRSDFLVMLVTFLVTVFTDLLIGVLVGVLLSLLLFLRRVSRPHVVV--LRVPGTHFRNVERHPEAETGPGVLV 425
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648 584 FRFVAPLYYINKECFKSALYKktlnpilvkaaqkkaakrkitketvilsgIQDEVSVqlsydplelhtVVIDCSTIQFLD 663
Cdd:COG0659  426 YRLDGPLFFGNAERLKERLDA-----------------------------LAPDPRV-----------VILDLSAVPFID 465
                        570       580       590       600       610       620
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648 664 TAGIHTLKEVRRDYEAIGIRVLLAQCNPSVRDSLACGEYFKEEEENLLFYSVYEAVAFAE 723
Cdd:COG0659  466 ATALEALEELAERLRARGITLELAGLKPPVRDLLERAGLLDELGEERVFPDLDEALEAAE 525
STAS cd06844
Sulphate Transporter and Anti-Sigma factor antagonist domain found in the C-terminal region of ...
573-710 2.55e-33

Sulphate Transporter and Anti-Sigma factor antagonist domain found in the C-terminal region of sulphate transporters as well as in bacterial and archaeal proteins involved in the regulation of sigma factors; The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain is found in the C-terminal region of sulphate transporters as well as in bacterial and archaeal proteins involved in the regulation of sigma factors, like anti-anti-sigma factors and "stressosome" components. The sigma factor regulators are involved in protein-protein interaction which is regulated by phosphorylation.


Pssm-ID: 132911 [Multi-domain]  Cd Length: 100  Bit Score: 123.36  E-value: 2.55e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648 573 KNLQTKPGIKIFRFVAPLYYINKECFKSALYKKTLNPILvkaaqkkaakrkitketvilsgiqdevsvqlsydplelHTV 652
Cdd:cd06844    1 VPLEKVDDYWVVRLEGELDHHSVEQFKEELLHNITNVAG--------------------------------------KTI 42
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 472366648 653 VIDCSTIQFLDTAGIHTLKEVRRDYEAIGIRVLLAQCNPSVRDSLACGEYFKEEEENL 710
Cdd:cd06844   43 VIDISALEFMDSSGTGVLLERSRLAEAVGGQFVLTGISPAVRITLTESGLDKG*ATAL 100
STAS_SulP_like_sulfate_transporter cd07042
Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, ...
572-715 3.05e-20

Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, plays a role in the function and regulation of the transport activity, proposed general NTP binding function; The SulP family is a large and diverse family of anion transporters, with members from eubacteria, plants, fungi, and mammals. They contain 10 to 14 transmembrane helices which form the catalytic core of the protein and a C-terminal extension, the STAS (Sulphate Transporter and AntiSigma factor antagonist) domain which plays a role in the function and regulation of the transport activity. The STAS domain is found in the C-terminal region of sulphate transporters and bacterial anti-sigma factor antagonists. It has been suggested that this domain may have a general NTP binding function.


Pssm-ID: 132913 [Multi-domain]  Cd Length: 107  Bit Score: 86.14  E-value: 3.05e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648 572 YKNLQTKPGIKIFRFVAPLYYINKECFKSALYKKTLnpilvkaaqkkaakrkitketvilsgiqdevsvqlsyDPLELHT 651
Cdd:cd07042    1 YPLAEEPPGVLIYRIDGPLFFGNAEYFKDRLLRLVD-------------------------------------EDPPLKV 43
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 472366648 652 VVIDCSTIQFLDTAGIHTLKEVRRDYEAIGIRVLLAQCNPSVRDSLACGEYFKEEEENLLFYSV 715
Cdd:cd07042   44 VILDLSAVNFIDSTAAEALEELVKDLRKRGVELYLAGLNPQVRELLERAGLLDEIGEENFFPTL 107
STAS pfam01740
STAS domain; The STAS (after Sulphate Transporter and AntiSigma factor antagonist) domain is ...
572-718 5.38e-17

STAS domain; The STAS (after Sulphate Transporter and AntiSigma factor antagonist) domain is found in the C terminal region of Sulphate transporters and bacterial antisigma factor antagonists. It has been suggested that this domain may have a general NTP binding function.


Pssm-ID: 426404 [Multi-domain]  Cd Length: 106  Bit Score: 76.88  E-value: 5.38e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648  572 YKNLQTKPGIKIFRFVAPLYYINKECFKSALYKKTLNPilvkaaqkkaakrkitketvilsgiqdevsvqlsydplELHT 651
Cdd:pfam01740   1 YPEAEEIPGILILRLDGPLDFANAESLRERLLRALEEG--------------------------------------EIKH 42
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 472366648  652 VVIDCSTIQFLDTAGIHTLKEVRRDYEAIGIRVLLAQCNPSVRDSLACGEYFkeeEENLLFYSVYEA 718
Cdd:pfam01740  43 VVLDLSAVPFIDSSGLGALEELYKELRRRGVELVLVGPSPEVARTLEKTGLD---DIIKIFPTVAEA 106
PRK11660 PRK11660
putative transporter; Provisional
100-460 1.55e-15

putative transporter; Provisional


Pssm-ID: 183265 [Multi-domain]  Cd Length: 568  Bit Score: 80.38  E-value: 1.55e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648 100 WLPKYDLKKnILGDMMSGLIVGILLVPQSIAYSLLAGQEPIYGLYTSFFASIIYFLLGTSRhisVGIFG-------ILcl 172
Cdd:PRK11660  20 WKEKYTAAR-FTRDLIAGITVGIIAIPLAMALAIASGVPPQYGLYTAAVAGIVIALTGGSR---FSVSGptaafvvIL-- 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648 173 migevvdrelhkagYDTAQnapsHLGMvsngSALLnqtsdwlcdrscyaIAvgstvTFMAGVYQVAMGFFQVGFVSVYLS 252
Cdd:PRK11660  94 --------------YPVSQ----QFGL----AGLL--------------VA-----TLMSGIILILMGLARLGRLIEYIP 132
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648 253 DALLSGFVTGASFTILTSQAKYLLGLSLPR--SNGVGSLITtwiqIFRNIHKANLCDLITSLLCLLVLLptkelnehFKF 330
Cdd:PRK11660 133 LSVTLGFTSGIGIVIATLQIKDFFGLQMAHvpEHYLEKVGA----LFQALPTINWGDALIGIVTLGVLI--------LWP 200
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648 331 KLKAPIPTELIVVVAATLAS----HFG----KLNEKYNTSIA-GPIPTGfMPPKAPD------------------WNLIP 383
Cdd:PRK11660 201 RLKIRLPGHLPALLAGTAVMgvlnLLGghvaTIGSRFHYVLAdGSQGNG-IPPLLPQfvlpwnlpgadgqpftlsWDLIR 279
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 472366648 384 SLAVDAIAISIIGfAI-----TVSLSEMFAKKHgytvKANQEMYAIGFCNIIPSFFHCFTTSAALAKTLVKESTGCQTQL 458
Cdd:PRK11660 280 ALLPAAFSMAMLG-AIesllcAVVLDGMTGTKH----SANSELVGQGLGNIVAPFFGGITATAAIARSAANVRAGATSPI 354

                 ..
gi 472366648 459 SG 460
Cdd:PRK11660 355 SA 356
SpoIIAA COG1366
Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Signal transduction ...
650-697 5.02e-05

Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Signal transduction mechanisms];


Pssm-ID: 440977 [Multi-domain]  Cd Length: 93  Bit Score: 42.53  E-value: 5.02e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*...
gi 472366648 650 HTVVIDCSTIQFLDTAGIHTLKEVRRDYEAIGIRVLLAQCNPSVRDSL 697
Cdd:COG1366   40 RRVVLDLSGVTFIDSSGLGALLSLAKAARLLGGRLVLVGVSPAVARVL 87
STAS_anti-anti-sigma_factors cd07043
Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key ...
650-695 3.14e-04

Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation; Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.


Pssm-ID: 132914 [Multi-domain]  Cd Length: 99  Bit Score: 40.58  E-value: 3.14e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*.
gi 472366648 650 HTVVIDCSTIQFLDTAGIHTLKEVRRDYEAIGIRVLLAQCNPSVRD 695
Cdd:cd07043   39 RRLVLDLSGVTFIDSSGLGVLLGAYKRARAAGGRLVLVNVSPAVRR 84
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH