NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1191819213|ref|XP_003483090|]
View 

olfactory receptor 4D2 [Sus scrofa]

Protein Classification

olfactory receptor 4D-like( domain architecture ID 11610407)

olfactory receptor (OR) 4D-like such as human olfactory receptor 4D9 and related proteins in other mammals; ORs play a central role in olfaction, the sense of smell, and belong to the class A rhodopsin-like family of seven-transmembrane G protein-coupled receptors (7TM GPCRs)

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
7tmA_OR4D-like cd15936
olfactory receptor 4D and related proteins, member of the class A family of ...
35-291 2.37e-149

olfactory receptor 4D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


:

Pssm-ID: 320602 [Multi-domain]  Cd Length: 267  Bit Score: 419.82  E-value: 2.37e-149
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15936    11 YLTTWLGNLLIIITVISDPHLHTPMYFLLANLAFLDISFSSVTAPKMLSDLLSQTKTISFNGCMAQMFFFHFTGGAEVFL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15936    91 LSVMAYDRYIAIHKPLHYLTIMNQGVCTGLVAGSWLGGFAHSIVQVALLLQLPFCGPNVLDNFYCDVPQVIKLACTDTFL 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYSVILVMLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPFTSFPMDKAVSIS 274
Cdd:cd15936   171 LELLMVSNSGLVTLLIFFILLISYTVILVKIRTHVTEGKRKALSTCASQITVVTLIFVPCIYIYARPFQTFPMDKAVSVL 250
                         250
                  ....*....|....*..
gi 1191819213 275 HTVLTPMLNPLIYTLRN 291
Cdd:cd15936   251 YTVITPMLNPMIYTLRN 267
 
Name Accession Description Interval E-value
7tmA_OR4D-like cd15936
olfactory receptor 4D and related proteins, member of the class A family of ...
35-291 2.37e-149

olfactory receptor 4D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320602 [Multi-domain]  Cd Length: 267  Bit Score: 419.82  E-value: 2.37e-149
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15936    11 YLTTWLGNLLIIITVISDPHLHTPMYFLLANLAFLDISFSSVTAPKMLSDLLSQTKTISFNGCMAQMFFFHFTGGAEVFL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15936    91 LSVMAYDRYIAIHKPLHYLTIMNQGVCTGLVAGSWLGGFAHSIVQVALLLQLPFCGPNVLDNFYCDVPQVIKLACTDTFL 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYSVILVMLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPFTSFPMDKAVSIS 274
Cdd:cd15936   171 LELLMVSNSGLVTLLIFFILLISYTVILVKIRTHVTEGKRKALSTCASQITVVTLIFVPCIYIYARPFQTFPMDKAVSVL 250
                         250
                  ....*....|....*..
gi 1191819213 275 HTVLTPMLNPLIYTLRN 291
Cdd:cd15936   251 YTVITPMLNPMIYTLRN 267
7tm_4 pfam13853
Olfactory receptor; The members of this family are transmembrane olfactory receptors.
35-301 9.98e-32

Olfactory receptor; The members of this family are transmembrane olfactory receptors.


Pssm-ID: 404695  Cd Length: 278  Bit Score: 119.53  E-value: 9.98e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:pfam13853   5 YLIIFLGNGTILFVIKTESSLHQPMYLFLAMLALIDLGLSASTLPTVLGIFWFGLREISFEACLTQMFFIHKFSIMESAV 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:pfam13853  85 LLAMAVDRFVAICSPLRYTTILTNPVISRIGLGVSVRSFILVLPLPFLLRRLPFCGHHVLSHSYCLHMGLARLSCADIKV 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LE----FLMISNSGMLVLIwflfLLISYSVIL-VMLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPFTSFPMDK 269
Cdd:pfam13853 165 NNiyglFVVTSTFGIDSLL----IVLSYGLILrTVLGIASREGRLKALNTCGSHVCAVLAFYTPMIGLSMVHRFGHNVPP 240
                         250       260       270
                  ....*....|....*....|....*....|....*.
gi 1191819213 270 AVSI----SHTVLTPMLNPLIYTLRNQEMQAAVKRL 301
Cdd:pfam13853 241 LLQImmanAYLFFPPVLNPIVYSVKTKQIRDCVKRM 276
 
Name Accession Description Interval E-value
7tmA_OR4D-like cd15936
olfactory receptor 4D and related proteins, member of the class A family of ...
35-291 2.37e-149

olfactory receptor 4D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320602 [Multi-domain]  Cd Length: 267  Bit Score: 419.82  E-value: 2.37e-149
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15936    11 YLTTWLGNLLIIITVISDPHLHTPMYFLLANLAFLDISFSSVTAPKMLSDLLSQTKTISFNGCMAQMFFFHFTGGAEVFL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15936    91 LSVMAYDRYIAIHKPLHYLTIMNQGVCTGLVAGSWLGGFAHSIVQVALLLQLPFCGPNVLDNFYCDVPQVIKLACTDTFL 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYSVILVMLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPFTSFPMDKAVSIS 274
Cdd:cd15936   171 LELLMVSNSGLVTLLIFFILLISYTVILVKIRTHVTEGKRKALSTCASQITVVTLIFVPCIYIYARPFQTFPMDKAVSVL 250
                         250
                  ....*....|....*..
gi 1191819213 275 HTVLTPMLNPLIYTLRN 291
Cdd:cd15936   251 YTVITPMLNPMIYTLRN 267
7tmA_OR4-like cd15226
olfactory receptor family 4 and related proteins, member of the class A family of ...
35-291 3.25e-129

olfactory receptor family 4 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 4 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320354 [Multi-domain]  Cd Length: 267  Bit Score: 368.84  E-value: 3.25e-129
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15226    11 YVATVLGNLLIVVTVTSDPHLHSPMYFLLANLSFIDLCLSSFATPKMICDLLREHKTISFGGCMAQIFFLHFFGGSEMVL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15226    91 LIAMAFDRYVAICKPLHYLTIMSPRMCILLVVASWIIGFIHSLSQLAFVVNLPFCGPNVVDSFFCDLPLVIKLACTDTYV 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYSVILVMLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPFTSFPMDKAVSIS 274
Cdd:cd15226   171 LELMVVANSGLISLVCFLLLLISYIVILVTVRKHSSGGSSKALSTCSAHITVVVLFFGPCIFIYVWPFSTFPVDKFLAVF 250
                         250
                  ....*....|....*..
gi 1191819213 275 HTVLTPMLNPLIYTLRN 291
Cdd:cd15226   251 YTVITPLLNPIIYTLRN 267
7tmA_OR4A-like cd15939
olfactory receptor 4A and related proteins, member of the class A family of ...
35-291 1.01e-123

olfactory receptor 4A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4A, 4C, 4P, 4S, 4X and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320605 [Multi-domain]  Cd Length: 267  Bit Score: 354.98  E-value: 1.01e-123
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15939    11 YLATVLGNLLIVVTIKASQTLGSPMYFFLSYLSFIDICYSSTTAPKLIVDLLSERKTISFNGCMTQLFAEHFFGGAEIFL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15939    91 LTVMAYDRYVAICKPLHYTTIMNRRVCGLLVGVAWVGGFLHSTIQILLTLQLPFCGPNVIDHFFCDLFPLLKLACTDTYV 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYSVILVMLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPFTSFPMDKAVSIS 274
Cdd:cd15939   171 IGLLVVANSGLICLLSFLILLISYIVILYSLRTHSSEGRRKALSTCGSHITVVVLFFVPCIFIYMRPVTTFPIDKVVAVF 250
                         250
                  ....*....|....*..
gi 1191819213 275 HTVLTPMLNPLIYTLRN 291
Cdd:cd15939   251 YTIITPMLNPLIYTLRN 267
7tmA_OR4N-like cd15937
olfactory receptor 4N, 4M, and related proteins, member of the class A family of ...
35-291 3.82e-111

olfactory receptor 4N, 4M, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4N, 4M, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320603  Cd Length: 267  Bit Score: 322.84  E-value: 3.82e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15937    11 YLIILPGNILIILTIQGDPQLGSPMYFFLANLALLDICYSSITPPKMLADFFSERKTISYGGCMAQLFFLHFLGAAEMFL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15937    91 LVAMAYDRYVAICKPLHYTTVVNRRVCCVLVGASWAGGFIHSIIQVALIIRLPFCGPNVLDNFFCDITQVIKLACTNTYT 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYSVILVMLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPFTSFPMDKAVSIS 274
Cdd:cd15937   171 VELLMFSNSGLVILLCFLLLLISYAFLLAKLRTHSSKGKSKAASTCITHIIIVFVMFGPAIYIYARPFRSFPMDKVVAVF 250
                         250
                  ....*....|....*..
gi 1191819213 275 HTVLTPMLNPLIYTLRN 291
Cdd:cd15937   251 HTVIFPLLNPMIYTLRN 267
7tmA_OR cd13954
olfactory receptors, member of the class A family of seven-transmembrane G protein-coupled ...
35-291 5.58e-109

olfactory receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320092 [Multi-domain]  Cd Length: 270  Bit Score: 317.50  E-value: 5.58e-109
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd13954    11 YLLTLLGNLLIILLVRLDSRLHTPMYFFLSNLSFLDICYTSVTVPKMLANLLSGDKTISFSGCLTQLYFFFSLGGTECFL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd13954    91 LAVMAYDRYVAICHPLHYPTIMNKRVCILLAAGSWLIGFLNSLIHTVLISQLPFCGSNVINHFFCDIPPLLKLSCSDTSL 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYSVILV-MLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARP--FTSFPMDKAV 271
Cdd:cd13954   171 NELVIFILAGFVGLGSFLLTLVSYIYIIStILKIPSAEGRQKAFSTCASHLTVVSLFYGTIIFMYVRPssSYSSDLDKVV 250
                         250       260
                  ....*....|....*....|
gi 1191819213 272 SISHTVLTPMLNPLIYTLRN 291
Cdd:cd13954   251 SVFYTVVTPMLNPIIYSLRN 270
7tmA_OR4Q3-like cd15935
olfactory receptor 4Q3 and related proteins, member of the class A family of ...
35-291 2.58e-104

olfactory receptor 4Q3 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 4Q3 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320601 [Multi-domain]  Cd Length: 268  Bit Score: 305.53  E-value: 2.58e-104
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRL-HTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVF 113
Cdd:cd15935    11 YAAILLGNLLIVVTVHADPHLlQSPMYFFLANLSLIDMTLGSVAVPKVLADLLTCGRTISFGGCMAQLFFLHFLGGSEML 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 114 FLSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTS 193
Cdd:cd15935    91 LLTLMAYDRYVAICHPLRYLAVMNRQLCIKLLAACWAGGFLHSATQAALVLRLPFCGPNELDNFYCDVPQVIKLACMDTY 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 194 VLEFLMISNSGMLVLIWFLFLLISYSVILVMLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPFTSFPMDKAVSI 273
Cdd:cd15935   171 VVEVLMVANSGLLSLVCFLVLLVSYGIILTTLRGRFREGGGKALSTCSSHLTVVSLIFVPCIFVYLRPFSSSSVDKVASV 250
                         250
                  ....*....|....*...
gi 1191819213 274 SHTVLTPMLNPLIYTLRN 291
Cdd:cd15935   251 FYTLITPALNPLIYTLRN 268
7tmA_OR4E-like cd15940
olfactory receptor 4E and related proteins, member of the class A family of ...
35-291 2.75e-104

olfactory receptor 4E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4E and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320606 [Multi-domain]  Cd Length: 267  Bit Score: 305.52  E-value: 2.75e-104
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15940    11 YLLTLSGNILIMITIVMDPRLHTPMYFFLSNLSFIDICHSSVTVPKMLSDLLSEEKTISFNGCVTQLFFLHLFACTEIFL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15940    91 LTIMAYDRYVAICNPLHYPTVMNHKVCLWLVAALWLGGTVHSLAQTFLTIRLPYCGPNEIDSFFCDVPPVIKLACTDTYL 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYSVILVMLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPFTSFPMDKAVSIS 274
Cdd:cd15940   171 IDILIVSNSGLISLVCFVALLGSYIVILVSLRKRSTEGRRKALSTCASHLTVVTLFFGPCIFIYTRPSTSFSEDKVVSVF 250
                         250
                  ....*....|....*..
gi 1191819213 275 HTVLTPMLNPLIYTLRN 291
Cdd:cd15940   251 YTVVTPLLNPIIYTLRN 267
7tmA_OR10A-like cd15225
olfactory receptor subfamily 10A and related proteins, member of the class A family of ...
35-298 1.23e-102

olfactory receptor subfamily 10A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10A, 10C, 10H, 10J, 10V, 10R, 10J, 10W, among others, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320353  Cd Length: 277  Bit Score: 301.68  E-value: 1.23e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15225    11 YLVTLLGNLLIILITKVDPALHTPMYFFLRNLSFLEICYTSVIVPKMLVNLLSEDKTISFLGCATQMFFFLFLGGTECFL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15225    91 LAAMAYDRYVAICNPLRYTLIMNRRVCLQLVAGSWLSGILVSLGQTTLIFSLPFCGSNEINHFFCDIPPVLKLACADTSL 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYSVILV-MLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPFTSF--PMDKAV 271
Cdd:cd15225   171 NEIAIFVASVLVILVPFLLILVSYIFIIStILKIPSAEGRRKAFSTCSSHLIVVTLFYGCASFTYLRPKSSYspETDKLL 250
                         250       260
                  ....*....|....*....|....*..
gi 1191819213 272 SISHTVLTPMLNPLIYTLRNQEMQAAV 298
Cdd:cd15225   251 SLFYTVVTPMLNPIIYSLRNKEVKGAL 277
7tmA_OR4Q2-like cd15938
olfactory receptor 4Q2 and related proteins, member of the class A family of ...
35-291 1.70e-101

olfactory receptor 4Q2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 4Q2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320604 [Multi-domain]  Cd Length: 265  Bit Score: 298.32  E-value: 1.70e-101
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15938    11 YTMVLVGNLLIMVTVRSDPKLSSPMYFLLGNLSFLDLCYSTVTCPKMLVDFLSQRKAISYEACIAQLFFLHFVGAAEMFL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15938    91 LTVMAYDRYVAICKPLHYTTIMSRRLCWVLVAASWAGGFLHSIVQTLLTIQLPFCGPNQVNNFFCDVPPVIKLACTDTCV 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYSVILVMLgaHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPFTSFPMDKAVSIS 274
Cdd:cd15938   171 TELLMVSNSGLISTVCFVVLVTSYTTILVTI--RSTEGRRKALSTCASHLMVVTLFFGPCIFIYARPFSTFPVDKHVSVL 248
                         250
                  ....*....|....*..
gi 1191819213 275 HTVLTPMLNPLIYTLRN 291
Cdd:cd15938   249 YNVITPMLNPLIYTLRN 265
7tmA_OR5-like cd15230
olfactory receptor family 5 and related proteins, member of the class A family of ...
35-291 2.15e-100

olfactory receptor family 5 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 5, some subfamilies from families 8 and 9, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320358  Cd Length: 270  Bit Score: 295.57  E-value: 2.15e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15230    11 YLITLVGNLGMIVLIRIDSRLHTPMYFFLSNLSFVDICYSSVITPKMLVNFLSEKKTISFAGCAAQFFFFAVFGTTECFL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15230    91 LAAMAYDRYVAICNPLLYTVIMSKRVCIQLVAGSYLCGFVNSIVHTSSTFSLSFCGSNVINHFFCDIPPLLKLSCSDTHI 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYSVILV-MLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPFTSFPM--DKAV 271
Cdd:cd15230   171 NELVLFAFSGFIGLSTLLIILISYLYILItILRIRSAEGRRKAFSTCASHLTAVSLFYGTLIFMYLRPSSSYSLdqDKVV 250
                         250       260
                  ....*....|....*....|
gi 1191819213 272 SISHTVLTPMLNPLIYTLRN 291
Cdd:cd15230   251 SVFYTVVIPMLNPLIYSLRN 270
7tmA_OR5V1-like cd15231
olfactory receptor subfamily 5V1 and related proteins, member of the class A family of ...
35-298 2.35e-95

olfactory receptor subfamily 5V1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5V1 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320359 [Multi-domain]  Cd Length: 277  Bit Score: 283.00  E-value: 2.35e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15231    11 YLVTLLGNLLIITLVLLDSHLHTPMYFFLSNLSFLDICYTSVTVPKMLVNLLRERKTISYIGCLAQLFFFVSFVGTECLL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15231    91 LAVMAYDRYVAICNPLHYAVIMSRKVCLQLAAASWLCGFLNSAVHTVLTFRLSFCGSNQISHFFCDIPPLLKLSCSDTSL 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYSVILV-MLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPFTSFPMDKA--V 271
Cdd:cd15231   171 NEVLLLVASVFIGLTPFLFIVISYVYIIStILKIRSAEGRRKAFSTCASHLTVVTLFYGTAIFNYNRPSSGYSLDKDtlI 250
                         250       260
                  ....*....|....*....|....*..
gi 1191819213 272 SISHTVLTPMLNPLIYTLRNQEMQAAV 298
Cdd:cd15231   251 SVLYSIVTPMLNPIIYSLRNKEVKGAL 277
7tmA_OR6C-like cd15912
olfactory receptor subfamily 6C and related proteins, member of the class A family of ...
35-291 6.76e-94

olfactory receptor subfamily 6C and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6C, 6X, 6J, 6T, 6V, 6M, 9A, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320578  Cd Length: 270  Bit Score: 278.98  E-value: 6.76e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15912    11 YLLTLLGNLLIITITLVDHRLHTPMYFFLRNFSFLEILFTSVVIPKMLANLLSGKKTISFAGCFAQSFFYFFLGTTEFFL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15912    91 LAVMSFDRYVAICNPLHYPTIMNSRVCLQLVLGSWVGGFLLILPPTILVFQLPFCGPNVINHFFCDSGPLLKLSCSDTRL 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYSVILV-MLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPFT--SFPMDKAV 271
Cdd:cd15912   171 IELLDFILASVVLLGSLLLTIVSYIYIIStILRIPSASGRQKAFSTCASHLTVVSIFYGSCIFMYVRPSQssSLDLNKVV 250
                         250       260
                  ....*....|....*....|
gi 1191819213 272 SISHTVLTPMLNPLIYTLRN 291
Cdd:cd15912   251 ALLNTVVTPLLNPFIYTLRN 270
7tmA_OR8S1-like cd15229
olfactory receptor subfamily 8S1 and related proteins, member of the class A family of ...
35-298 3.62e-93

olfactory receptor subfamily 8S1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 8S1 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320357 [Multi-domain]  Cd Length: 277  Bit Score: 277.56  E-value: 3.62e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15229    11 YLLTLLGNLLIMLVIRADSHLHTPMYFFLSHLSFLDICYSSVTVPKMLENLLSERKTISVEGCIAQIFFFFFFAGTEAFL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15229    91 LSAMAYDRYAAICHPLHYVQIMSKQVCVQLVGGAWALGFLYALINTLLLLNLHFCGPNEINHFSCELPSLLPLSCSDTFA 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYS-VILVMLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARP--FTSFPMDKAV 271
Cdd:cd15229   171 NKMVLLTSSVIFGLGSFLLTLVSYIhIISTILRIRSAEGRSKAFSTCSSHLTVVGLFYGTGFFRYLRPnsASSSVLDRVF 250
                         250       260
                  ....*....|....*....|....*..
gi 1191819213 272 SISHTVLTPMLNPLIYTLRNQEMQAAV 298
Cdd:cd15229   251 SIQYSILTPMLNPIIYSLKNKEVKAAL 277
7tmA_OR5AP2-like cd15943
olfactory receptor subfamily 5AP2 and related proteins, member of the class A family of ...
11-301 1.39e-92

olfactory receptor subfamily 5AP2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AP2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320609 [Multi-domain]  Cd Length: 295  Bit Score: 276.94  E-value: 1.39e-92
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  11 EFVFLGLSQTRELQLFLFLVVLFVYTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKK 90
Cdd:cd15943     1 EFILLGLTDNPELQVILFAVFLVIYLITLVGNLGMIVLIRLDSRLHTPMYFFLSHLSFLDLCYSSAITPKMLVNFLAENK 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  91 TISYEGCMAQLFFFHFLGGAMVFFLSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCG 170
Cdd:cd15943    81 TISFTGCAAQMYFFVAFATTECFLLAVMAYDRYVAICNPLLYTVIMSPRVCIQLVAGSYLIGFVNALIQTICTFRLPFCG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 171 PNVLDNFYCDVPQVLRLACTDTSVLEFLMISNSGMLVLIWFLFLLISYSVILV-MLGAHSGQARRKAASTCTTHIVVVSM 249
Cdd:cd15943   161 SNVINHFFCDVPPLLKLSCSDTHVNEIVLFAFAIFLGIFTSLEILVSYVYILSaILRIHSSEGRRKAFSTCASHLMAVTI 240
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1191819213 250 VFIPSIYLYARPFTSFPM--DKAVSISHTVLTPMLNPLIYTLRNQEMQAAVKRL 301
Cdd:cd15943   241 FYGTTLFMYLRPSSSYSLdqDKVVSVFYTVVIPMLNPLIYSLRNKEVKDALRRI 294
7tmA_OR5AK3-like cd15408
olfactory receptor subfamily 5AK3, 5AU1, and related proteins, member of the class A family of ...
12-294 2.81e-92

olfactory receptor subfamily 5AK3, 5AU1, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AK3, 5AU1, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320530  Cd Length: 287  Bit Score: 275.74  E-value: 2.81e-92
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  12 FVFLGLSQTRELQLFLFLVVLFVYTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKT 91
Cdd:cd15408     1 FILLGFTDQPELQVLLFVVFLLIYVITLVGNLGMILLIRLDSRLHTPMYFFLSHLSFLDICYSSTITPKTLLNLLAERKV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  92 ISYEGCMAQLFFFHFLGGAMVFFLSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGP 171
Cdd:cd15408    81 ISFTGCLTQLYFYAVFATTECYLLAAMAYDRYVAICNPLLYTVIMSQRVCVSLVAGSYLAGFLNSTVHTGFILRLSFCGS 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 172 NVLDNFYCDVPQVLRLACTDTSVLEFLMISNSGMLVLIWFLFLLISYSVILV-MLGAHSGQARRKAASTCTTHIVVVSMV 250
Cdd:cd15408   161 NVINHFFCDGPPLLALSCSDTSLNEMLLFAFVGFNVLTTTLVILISYTYILAtILRMRSAEGRHKAFSTCASHLTAVTLF 240
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 1191819213 251 FIPSIYLYARPFTSFPM--DKAVSISHTVLTPMLNPLIYTLRNQEM 294
Cdd:cd15408   241 YGSLAFMYLRPSSRYSLdlDKVASVFYTVVIPMLNPLIYSLRNKEV 286
7tmA_OR1A-like cd15235
olfactory receptor subfamily 1A and related proteins, member of the class A family of ...
35-298 6.34e-91

olfactory receptor subfamily 1A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 1A, 1B, 1K, 1L, 1Q and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320363 [Multi-domain]  Cd Length: 278  Bit Score: 271.79  E-value: 6.34e-91
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15235    12 YLLTLLGNLLIVLLIRSDPRLHTPMYFFLSHLSLVDICFTSTTVPKMLANLLSGSKTISYAGCLAQMYFFIAFGNTDSFL 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15235    92 LAVMAYDRYVAICHPLHYATVMSPKRCLLLVAGSWLLSHLHSLLHTLLMSRLSFCGSNEIPHFFCDLQPLLKLSCSDTSL 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYSVILV-MLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPFTSFPMDKA--V 271
Cdd:cd15235   172 NELLIFTEGAVVVLGPFLLIVLSYARILAaVLKVPSAAGRRKAFSTCGSHLTVVALFYGTIIGVYFQPSSSYSADKDrvA 251
                         250       260
                  ....*....|....*....|....*..
gi 1191819213 272 SISHTVLTPMLNPLIYTLRNQEMQAAV 298
Cdd:cd15235   252 TVMYTVVTPMLNPFIYSLRNKDVKGAL 278
7tmA_OR9K2-like cd15419
olfactory receptor subfamily 9K2 and related proteins, member of the class A family of ...
35-300 4.53e-90

olfactory receptor subfamily 9K2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes transmembrane olfactory receptor subfamily 9K2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320541  Cd Length: 279  Bit Score: 269.95  E-value: 4.53e-90
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15419    11 YMVTVLGNIGMIIIISTDSRLHTPMYFFLMNLSFLDLCYSSVIAPKALANFLSESKTISYNGCAAQFFFFSLFGTTEGFL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15419    91 LAAMAYDRFIAICNPLLYPVIMSRRVCVQLVAGSYLCGCINSIIQTSFTFSLSFCGSNEIDHFFCDVPPLLKLSCSDTFI 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYSVILV-MLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARP-FTSFP-MDKAV 271
Cdd:cd15419   171 NELVMFVLCGLIIVSTILVILVSYAYILStILRIPSAEGRKKAFSTCASHLTAVSLFYGTVFFMYAQPgAVSSPeQSKVV 250
                         250       260
                  ....*....|....*....|....*....
gi 1191819213 272 SISHTVLTPMLNPLIYTLRNQEMQAAVKR 300
Cdd:cd15419   251 SVFYTLVIPMLNPLIYSLRNKDVKEALKR 279
7tmA_OR13H-like cd15431
olfactory receptor subfamily 13H and related proteins, member of the class A family of ...
35-291 1.85e-89

olfactory receptor subfamily 13H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 13H and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320548 [Multi-domain]  Cd Length: 269  Bit Score: 267.94  E-value: 1.85e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15431    11 YLVTLLGNGLIILLIRVDSQLHTPMYFFLSNLSFLDICYTTSSVPQMLVNCLSDRPTISYSRCLAQMYISLFLGITECLL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISqLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15431    91 LAVMAYDRFVAICNPLRYTLIMSWRVCIQLAAGSWVSAFLLTVI-PVLTMPLHFCGPNVINHFFCEVQALLKLACSDTSL 169
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYSVILV-MLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARP-FTSFP-MDKAV 271
Cdd:cd15431   170 NEILMFATSIFTLLLPFSFILVSYIRIGVaVLRIRSAEGRRKAFSTCGSHLTVVTIFYGTAIFMYLRPqSKSSSdQDKII 249
                         250       260
                  ....*....|....*....|
gi 1191819213 272 SISHTVLTPMLNPLIYTLRN 291
Cdd:cd15431   250 SVFYGVVTPMLNPLIYSLRN 269
7tmA_OR10D-like cd15228
olfactory receptor subfamily 10D and related proteins, member of the class A family of ...
35-297 2.59e-89

olfactory receptor subfamily 10D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 10D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320356 [Multi-domain]  Cd Length: 275  Bit Score: 267.76  E-value: 2.59e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15228    11 YLCTLLGNLLILSAILSDPRLHTPMYFFLCNLSVFDIGFSSVSTPKMLAYLWGQSRVISLGGCMSQVFFYHFLGSTECLL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15228    91 YTVMAYDRYVAICHPLRYLLIMNRRVCALLAAGTWITSSFHATILTSLTFTLPYCGSNVVDYFFCDIFPVLKLACADTSI 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYSVILV-MLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPFTSFPMDKAVSI 273
Cdd:cd15228   171 AETVSFTNVGLVPLTCFLLILASYVRIVIsILKMRSAEGRRKAFSTCSSHLTVVTLFFGPCALIYTQPTPSPVLVTPVQI 250
                         250       260
                  ....*....|....*....|....
gi 1191819213 274 SHTVLTPMLNPLIYTLRNQEMQAA 297
Cdd:cd15228   251 FNNVVTPMLNPLIYTLRNKEVKAA 274
7tmA_OR14-like cd15227
olfactory receptor family 14 and related proteins, member of the class A family of ...
35-291 3.67e-89

olfactory receptor family 14 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 14 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320355  Cd Length: 270  Bit Score: 267.01  E-value: 3.67e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15227    11 YLAALTGNLLIITVVTLDHHLHTPMYFFLKNLSFLDLCYISVTVPKSIANSLTNTRSISFLGCVAQVFLFIFFAASELAL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15227    91 LTVMAYDRYVAICHPLHYEVIMNRGACVQMAAASWLSGLLYGALHTANTFSLPFCGSNVIHQFFCDIPQLLKLSCSDTYL 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYSVIL-VMLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPFTSFP--MDKAV 271
Cdd:cd15227   171 NEIGVLVLSVCLGLGCFVFIIVSYVHIFsTVLRIPSAQGRSKAFSTCLPHLIVVSLFLSTGSFAYLKPPSDSPslLDLLL 250
                         250       260
                  ....*....|....*....|
gi 1191819213 272 SISHTVLTPMLNPLIYTLRN 291
Cdd:cd15227   251 SVFYSVVPPTLNPIIYSLRN 270
7tmA_OR2-like cd15237
olfactory receptor family 2 and related proteins, member of the class A family of ...
35-291 4.13e-89

olfactory receptor family 2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 2 and 13, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320365 [Multi-domain]  Cd Length: 270  Bit Score: 267.22  E-value: 4.13e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15237    11 YLLTLLGNGLIILLIWLDSRLHTPMYFFLSNLSLLDICYTTSTVPQMLVHLLSEHKTISFVGCAAQMFFFLALGVTECVL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15237    91 LAVMAYDRYVAICNPLRYSVIMSRRVCVRLAATSWASGFLNSLVLTSLTLRLPFCGPNHINHFFCEAPAVLKLACADTSL 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYSVIL-VMLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPFTSFP--MDKAV 271
Cdd:cd15237   171 NEAVIFVTSVLVLLIPFSLILASYIRILaTILRIQSAEGRKKAFSTCASHLTVVTLFYGTAIFMYMRPHSTHSpdQDKMI 250
                         250       260
                  ....*....|....*....|
gi 1191819213 272 SISHTVLTPMLNPLIYTLRN 291
Cdd:cd15237   251 SVFYTIVTPMLNPLIYSLRN 270
7tmA_OR11A-like cd15911
olfactory receptor subfamily 11A and related proteins, member of the class A family of ...
35-291 6.13e-89

olfactory receptor subfamily 11A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 11A and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320577  Cd Length: 270  Bit Score: 266.66  E-value: 6.13e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15911    11 YIVTMAGNILIIVLVVADRHLHTPMYFFLGNLSCLEICYTSTILPRMLASLLTGDRTISVSGCIVQFYFFGSLAATECYL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15911    91 LAVMSYDRYLAICKPLHYASLMNGRLCLQLAAGSWISGFLASTITVILMSQLTFCGPNEIDHFFCDFAPLLKLSCSDTSL 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYSVILVM-LGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPFTSFP--MDKAV 271
Cdd:cd15911   171 VELVTFILSSIVTLPPFLLTLTSYICIISTiLRIPSTTGRQKAFSTCSSHLIVVTIFYGTLIIVYVVPSTNTSrdLNKVF 250
                         250       260
                  ....*....|....*....|
gi 1191819213 272 SISHTVLTPMLNPLIYTLRN 291
Cdd:cd15911   251 SLFYTVLTPLVNPLIYSLRN 270
7tmA_OR2T-like cd15421
olfactory receptor subfamily 2T and related proteins, member of the class A family of ...
35-297 3.10e-88

olfactory receptor subfamily 2T and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamilies 2T, 2M, 2L, 2V, 2Z, 2AE, 2AG, 2AK, 2AJ, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320543  Cd Length: 277  Bit Score: 265.18  E-value: 3.10e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15421    11 FLVALTGNALLILLIWLDSRLHTPMYFLLSQLSLMDLMLISTTVPKMATNFLSGRKSISFVGCGTQIFFFLTLGGAECLL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15421    91 LALMAYDRYVAICHPLRYPVLMSPRVCLLMAAGSWLGGSLNSLIHTVYTMHFPYCGSREIHHFFCEVPALLKLSCADTSA 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYSVILV-MLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARP--FTSFPMDKAV 271
Cdd:cd15421   171 YETVVYVSGVLFLLIPFSLILASYALILLtVLRMRSAEGRKKALATCSSHLTVVSLYYGPAIFTYMRPgsYHSPEQDKVV 250
                         250       260
                  ....*....|....*....|....*.
gi 1191819213 272 SISHTVLTPMLNPLIYTLRNQEMQAA 297
Cdd:cd15421   251 SVFYTILTPMLNPLIYSLRNKEVLGA 276
7tmA_OR12D-like cd15915
olfactory receptor subfamily 12D and related proteins, member of the class A family of ...
35-291 4.61e-87

olfactory receptor subfamily 12D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 12D and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320581 [Multi-domain]  Cd Length: 271  Bit Score: 261.86  E-value: 4.61e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15915    11 YLASLLGNGAILAVVIAEPRLHSPMYFFLGNLSCLDIFYSSVTVPKMLAGLLSEHKTISFQGCISQLHFFHFLGSSEAML 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15915    91 LAVMAYDRYVAICNPLRYTVIMNPQVCLLLAVACWVTGFFHALMHTVMTSRLPFCGPNKINHFFCDIKPLLKLACGDTSL 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYSVIL--VMLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPFT--SFPMDKA 270
Cdd:cd15915   171 NLWLLNIVTGSIALGTFILTLLSYIYIIsfLLLKVRSKEGRHKAFSTCASHLTVVLLLYGPALFTYIRPSSgdSLEQDRI 250
                         250       260
                  ....*....|....*....|.
gi 1191819213 271 VSISHTVLTPMLNPLIYTLRN 291
Cdd:cd15915   251 VALLYTVVTPVLNPLIYTLRN 271
7tmA_OR13-like cd15232
olfactory receptor family 13 and related proteins, member of the class A family of ...
35-291 2.05e-86

olfactory receptor family 13 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 13 (subfamilies 13A1 and 13G1) and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320360 [Multi-domain]  Cd Length: 270  Bit Score: 260.27  E-value: 2.05e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15232    11 YAAALTGNSLIILAISTSPKLHTPMYFFLVNLSLVDIICTSTVVPKLLQNLLTERKTISFGGCMAQLYFFTWSLGSELLL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15232    91 LTAMAYDRYVAICHPLHYSTIMRKEVCVGLATGVWAIGMLNSAVHTGLMLRLSFCGPNIINHFFCEIPPLLLLSCSDTSL 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYSVILV-MLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPFTSFPM--DKAV 271
Cdd:cd15232   171 NEIMAFVADVFFGVGNFLLTLTSYGFIIRsILRIRSTEGKKKAFSTCSSHLIVVSLYYSTVIYTYIRPSSSYSPekDKVV 250
                         250       260
                  ....*....|....*....|
gi 1191819213 272 SISHTVLTPMLNPLIYTLRN 291
Cdd:cd15232   251 AVLYSVVTPTLNPLIYSLRN 270
7tmA_OR5A1-like cd15417
olfactory receptor subfamily 5A1 and related proteins, member of the class A family of ...
35-300 2.77e-86

olfactory receptor subfamily 5A1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5A1, 5A2, 5AN1, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320539  Cd Length: 279  Bit Score: 260.27  E-value: 2.77e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15417    11 YLVTLLWNLGLIILIRMDSHLHTPMYFFLSNLSFVDICYSSSITPKMLSDFFREQKTISFVGCATQYFVFSGMGLTECFL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15417    91 LAAMAYDRYVAICNPLLYSVIMSPRLCVQLVAGAYLGGFLNSLIQTVSMFQLSFCGPNVIDHFFCDIPPLLSLSCSDTFI 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYSVILV-MLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPFTSFPM--DKAV 271
Cdd:cd15417   171 SQVVLFLVAVLFGVFSVLVVLISYGYIIStILKIRSAKGRSKAFNTCASHLTAVTLFYGTGLFVYLRPSSSHSQdqDKVA 250
                         250       260
                  ....*....|....*....|....*....
gi 1191819213 272 SISHTVLTPMLNPLIYTLRNQEMQAAVKR 300
Cdd:cd15417   251 SVFYTVVIPMLNPLIYSLRNKEIKDALKR 279
7tmA_OR10G-like cd15916
olfactory receptor subfamily 10G and related proteins, member of the class A family of ...
35-298 4.98e-86

olfactory receptor subfamily 10G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 10G, 10S, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320582 [Multi-domain]  Cd Length: 276  Bit Score: 259.30  E-value: 4.98e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEK-KTISYEGCMAQLFFFHFLGGAMVF 113
Cdd:cd15916    11 YLLTVLGNLLILLTVWVDSHLHRPMYIFLGHLSFLDMWLSTVTVPKMLAGFLEPGgKVISFGGCVAQLYFFHFLGSTECF 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 114 FLSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTS 193
Cdd:cd15916    91 LYTLMAYDRYLAICHPLHYPTIMTGRLCTRLATGTWVAGSLHSAIHTSLTFRLPFCGPNRIDYFFCDIPPLLKLACADTT 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 194 VLEFLMISNSGMLVLIWFLFLLISYSVIL-VMLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPFTSFPMDKAVS 272
Cdd:cd15916   171 INELVIFASIGVVALGCFILILLSYGNIVrAILRIRTAEGRRRAFSTCASHLIVVLCFYVPCVFIYLRPGSKEALDGVIA 250
                         250       260
                  ....*....|....*....|....*.
gi 1191819213 273 ISHTVLTPMLNPLIYTLRNQEMQAAV 298
Cdd:cd15916   251 VFYTVVTPLLNPLIYTLRNKEVKTAL 276
7tmA_OR1_7-like cd15918
olfactory receptor families 1, 7, and related proteins, member of the class A family of ...
35-291 5.93e-86

olfactory receptor families 1, 7, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 1 and 7, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320584 [Multi-domain]  Cd Length: 270  Bit Score: 259.08  E-value: 5.93e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15918    11 YLVTVLGNLLIILAIGSDSHLHTPMYFFLANLSLVDICFTSTTVPKMLVNIQTQSKSISYAGCLTQMYFFLLFGDLDNFL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15918    91 LAVMAYDRYVAICHPLHYTTIMSPRLCILLVAASWVITNLHSLLHTLLMARLSFCASNEIPHFFCDLNPLLKLSCSDTHL 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYS-VILVMLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPFTSFPM--DKAV 271
Cdd:cd15918   171 NELVILVLGGLVGLVPFLCILVSYVrIVSAVLRIPSAGGKWKAFSTCGSHLSVVSLFYGTVIGVYLSPPSSHSAskDSVA 250
                         250       260
                  ....*....|....*....|
gi 1191819213 272 SISHTVLTPMLNPLIYTLRN 291
Cdd:cd15918   251 AVMYTVVTPMLNPFIYSLRN 270
7tmA_OR8H-like cd15411
olfactory receptor subfamily 8H and related proteins, member of the class A family of ...
35-300 1.26e-84

olfactory receptor subfamily 8H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8H, 8I, 5F and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320533 [Multi-domain]  Cd Length: 279  Bit Score: 256.09  E-value: 1.26e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15411    11 YVITVMGNLGMILLIRADSQLHTPMYFFLSNLSFVDFCYSSTITPKALENFLSGRKAISFAGCFVQMYFFIALATTECFL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15411    91 LGLMAYDRYVAICNPLLYTVVMSRRVCLKLAAGSYAAGFLNSLIHTTLISRLSFCGSNVINHFFCDTPPLLKLSCSDTHV 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYSVIL-VMLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPFTSFP--MDKAV 271
Cdd:cd15411   171 NEMLIFILAGLTLVGSLLIILVSYTYILsTILKIRSAEGRRKAFSTCASHLTAVTIFYGTGIFTYLRPSSSYSlgQDKVA 250
                         250       260
                  ....*....|....*....|....*....
gi 1191819213 272 SISHTVLTPMLNPLIYTLRNQEMQAAVKR 300
Cdd:cd15411   251 SVFYTVVIPMLNPLIYSLRNKEVKNALRR 279
7tmA_OR5D-like cd15410
olfactory receptor subfamily 5D and related proteins, member of the class A family of ...
12-301 2.35e-84

olfactory receptor subfamily 5D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5D, 5L, 5W, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320532  Cd Length: 294  Bit Score: 255.66  E-value: 2.35e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  12 FVFLGLSQTRELQLFLFLVVLFVYTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKT 91
Cdd:cd15410     1 FILLGFTDYPELQVPLFLVFLAIYGITLLGNLGMIVLIKIDPKLHTPMYFFLSHLSFVDFCYSSVIAPKMLVNFLAEDKA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  92 ISYEGCMAQLFFFHFLGGAMVFFLSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGP 171
Cdd:cd15410    81 ISYSGCMLQFFFFCTFVVTESFLLAVMAYDRYVAICNPLLYTVIMSRKLCVLLVAGSYLWGIVCSLIHTCGLLRLSFCGS 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 172 NVLDNFYCDVPQVLRLACTDTSVLEFLMISNSGMLVLIWFLFLLISYSVILV-MLGAHSGQARRKAASTCTTHIVVVSMV 250
Cdd:cd15410   161 NVINHFFCDLPPLLSLSCSDTYLNELLLFIFGSLNEASTLLIILTSYVFIIVtILRIRSAEGRQKAFSTCASHLTAITIF 240
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1191819213 251 FIPSIYLYARPFTSFPM--DKAVSISHTVLTPMLNPLIYTLRNQEMQAAVKRL 301
Cdd:cd15410   241 HGTILFMYCRPSSSYSLdtDKVASVFYTVVIPMLNPLIYSLRNKDVKDALRKL 293
7tmA_OR2B-like cd15947
olfactory receptor subfamily 2B and related proteins, member of the class A family of ...
35-291 8.91e-83

olfactory receptor subfamily 2B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 2 (subfamilies 2B, 2C, 2G, 2H, 2I, 2J, 2W, 2Y) and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320613 [Multi-domain]  Cd Length: 270  Bit Score: 251.00  E-value: 8.91e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15947    11 YLLTLLGNTAIILLSLLDPRLHTPMYFFLSNLSFLDLCFTTSIVPQMLVNLWGPDKTISYGGCVTQLYIFLWLGSTECVL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15947    91 LAVMAFDRYVAVCRPLHYTVIMHPRLCVQLAALSWLSGLANSLLQTTLTLQLPLCGHHTLDHFFCEVPALIKLACVDTTF 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYSVIL-VMLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPFTSFPMD--KAV 271
Cdd:cd15947   171 NELELFVASVFFLLVPLSLILVSYGFIArAVLRIKSAEGRRKAFGTCSSHLLVVSLFYGTAIYMYLQPPSSYSQDqgKFI 250
                         250       260
                  ....*....|....*....|
gi 1191819213 272 SISHTVLTPMLNPLIYTLRN 291
Cdd:cd15947   251 SLFYTVVTPTLNPLIYTLRN 270
7tmA_OR2A-like cd15420
olfactory receptor subfamily 2A and related proteins, member of the class A family of ...
35-297 1.50e-82

olfactory receptor subfamily 2A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2A and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320542 [Multi-domain]  Cd Length: 277  Bit Score: 250.71  E-value: 1.50e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15420    11 YIFTLLGNGLILGLIWLDSRLHTPMYFFLSHLAVVDICYASSTVPHMLGNLLKQRKTISFAGCGTQMYLFLALAHTECVL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15420    91 LAVMSYDRYVAICHPLRYTVIMNWRVCTTLAATSWACGFLLALVHVVLLLRLPFCGPNEVNHFFCEILAVLKLACADTWI 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYSVILV-MLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPFTSFP--MDKAV 271
Cdd:cd15420   171 NEILIFAGCVFILLGPFSLILISYLHILAaILKIQSAEGRRKAFSTCSSHLCVVGLFYGTAMFMYMVPGSSNSaeQEKIL 250
                         250       260
                  ....*....|....*....|....*.
gi 1191819213 272 SISHTVLTPMLNPLIYTLRNQEMQAA 297
Cdd:cd15420   251 SLFYSLFNPMLNPLIYSLRNKQVKGA 276
7tmA_OR2F-like cd15429
olfactory receptor subfamily 2F and related proteins, member of the class A family of ...
35-297 5.03e-82

olfactory receptor subfamily 2F and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2F and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320546 [Multi-domain]  Cd Length: 277  Bit Score: 249.24  E-value: 5.03e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15429    11 YLLTLLGNFLIILLIRLDPRLHTPMYFFLSHLSFLDICYTTSVVPQMLAHFLAEHKTISFASCVAQLFISLALGGTEFIL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15429    91 LAVMAYDRYVAVCHPLRYTVIMSGGLCIQLAAASWTSGFLNSLVQTAFTFRLPFCGHNTINHFSCELLAVVRLACVDTSL 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYSVILV-MLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARP--FTSFPMDKAV 271
Cdd:cd15429   171 NEVAILVSSVVVLLTPCFLVLLSYIHIISaILRIRSSEGRHKAFSTCASHLTVVSLCYGTAIFTYMRPrsGSSALQEKMI 250
                         250       260
                  ....*....|....*....|....*.
gi 1191819213 272 SISHTVLTPMLNPLIYTLRNQEMQAA 297
Cdd:cd15429   251 SLFYAVVTPMLNPLIYSLRNKEVKGA 276
7tmA_OR5H-like cd15409
olfactory receptor subfamily 5H and related proteins, member of the class A family of ...
35-300 8.43e-82

olfactory receptor subfamily 5H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5H, 5K, 5AC, 5T and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320531 [Multi-domain]  Cd Length: 279  Bit Score: 248.86  E-value: 8.43e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15409    11 YLITLVGNLGLIALIWKDSHLHTPMYFFLGNLAFADACTSSSVTPKMLVNFLSKNKMISFSGCAAQFFFFGFSATTECFL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15409    91 LAAMAYDRYVAICNPLLYPVVMSNRLCVQLITASYIGGFLHSMIHVGLTFRLSFCGSNEINHFFCDIPPLLKISCTDPSI 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYSVIL-VMLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPFTSFPMDKA--V 271
Cdd:cd15409   171 NELVLFIFSGSIQVFTILTVLISYSYILfTILKMKSAEGRRKAFSTCGSHLLSVSLFYGSLFFMYVRPSSLYALDQDmmD 250
                         250       260
                  ....*....|....*....|....*....
gi 1191819213 272 SISHTVLTPMLNPLIYTLRNQEMQAAVKR 300
Cdd:cd15409   251 SLFYTIVIPLLNPFIYSLRNKEVIDALRK 279
7tmA_OR5P-like cd15416
olfactory receptor subfamily 5P and related proteins, member of the class A family of ...
35-300 5.16e-80

olfactory receptor subfamily 5P and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5P and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320538 [Multi-domain]  Cd Length: 279  Bit Score: 244.20  E-value: 5.16e-80
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15416    11 YSVTLLGNLSIILLIRISSQLHTPMYFFLSHLAFSDICYSSSVTPKMLVNFLVEKTTISYPGCAAQLCSAATFGTVECFL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15416    91 LAAMAYDRYVAICNPLLYSTIMSQKVCVLLVAASYLGGCLNALVFTTCVFSLSFCGPNEINHFFCDFPPLLKLSCSDIRL 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYSVILV-MLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPFTSFPMD--KAV 271
Cdd:cd15416   171 AKILPSISSGIIILVTVLTIIISYLYILIaILRIRSTEGRHKAFSTCASHLTAVTLFYGTITFIYVMPNSSYSMDqnKVV 250
                         250       260
                  ....*....|....*....|....*....
gi 1191819213 272 SISHTVLTPMLNPLIYTLRNQEMQAAVKR 300
Cdd:cd15416   251 SVFYMVVIPMLNPLIYSLRNKEVKGALKR 279
7tmA_OR6B-like cd15224
olfactory receptor subfamily 6B and related proteins, member of the class A family of ...
35-291 5.68e-80

olfactory receptor subfamily 6B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6B, 6A, 6Y, 6P, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320352  Cd Length: 270  Bit Score: 243.73  E-value: 5.68e-80
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15224    11 YVLTLLENLLIILTIWLNSQLHKPMYFFLSNLSFLEIWYISVTVPKLLAGFLSQNKSISFVGCMTQLYFFLSLACTECVL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15224    91 LAVMAYDRYVAICHPLRYPVIMTHQLCVQLAAGSWLSGFLISMIKVYFISQLSFCGPNVINHFFCDISPLLNLSCTDMSL 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISY-SVILVMLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARP--FTSFPMDKAV 271
Cdd:cd15224   171 AELVDFILALIILLVPLLVTVASYiCIISTVLRIPSATGRQKAFSTCASHLTVVIIFYSATLFMYARPkaISSFDSNKLV 250
                         250       260
                  ....*....|....*....|
gi 1191819213 272 SISHTVLTPMLNPLIYTLRN 291
Cdd:cd15224   251 SVLYTVVTPLLNPIIYCLRN 270
7tmA_OR5J-like cd15415
olfactory receptor subfamily 5J and related proteins, member of the class A family of ...
35-300 3.56e-79

olfactory receptor subfamily 5J and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5J and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320537 [Multi-domain]  Cd Length: 279  Bit Score: 241.93  E-value: 3.56e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15415    11 YFITLLGNLGMIVLIRINPQLHTPMYFFLSNLSFVDLCYSSVFAPRLLVNFLVEKKTISYSACIAQHFFFAVFVTTEGFL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15415    91 LAVMAYDRYVAICNPLLYTVAMTKRVCVQLVAGSYLGGLINSLTHTIGLLKLSFCGPNVINHYFCDIPPLLKLSCSDTHI 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYSVILV-MLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPFTSFPMD--KAV 271
Cdd:cd15415   171 NELLLLTFSGVIAMSTLLTIIISYIFILFaILRIRSAEGRRKAFSTCASHLTAVTLFYGSVSFSYIQPSSQYSLEqeKVS 250
                         250       260
                  ....*....|....*....|....*....
gi 1191819213 272 SISHTVLTPMLNPLIYTLRNQEMQAAVKR 300
Cdd:cd15415   251 AVFYTLVIPMLNPLIYSLRNKDVKDALKR 279
7tmA_OR6N-like cd15914
olfactory receptor OR6N and related proteins, member of the class A family of ...
35-291 9.52e-79

olfactory receptor OR6N and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6N, 6K, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320580 [Multi-domain]  Cd Length: 270  Bit Score: 240.74  E-value: 9.52e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15914    11 YLFIITGNLLIFTVVRLDTHLHTPMYFFISILSFLEIWYTTVTIPKMLSNLLSEEKTISFNGCLLQMYFFHSLGITECYL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15914    91 LTAMAYDRYLAICNPLHYPSIMTPKLCTQLAAGCWLCGFLGPVPEIILISTLPFCGPNQIQHIFCDFPPLLSLACTDTSL 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYS-VILVMLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPFTSFPM--DKAV 271
Cdd:cd15914   171 NVLVDFVIHAVIILLTFLLILLSYVkIISVVLKIPSAEGRQKAFSTCAAHLTVVLLFFGSVSFMYLRLSKSYSLdyDRAI 250
                         250       260
                  ....*....|....*....|
gi 1191819213 272 SISHTVLTPMLNPLIYTLRN 291
Cdd:cd15914   251 AVVYAVLTPFFNPIIYSLRN 270
7tmA_OR10G6-like cd15942
olfactory receptor subfamily 10G6 and related proteins, member of the class A family of ...
35-298 6.41e-78

olfactory receptor subfamily 10G6 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10G6 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320608  Cd Length: 275  Bit Score: 238.87  E-value: 6.41e-78
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15942    11 YLLTLSGNSLIILVVISDLQLHKPMYWFLCHLSILDMAVSTVVVPKVIAGFLSGGRIISFGGCVTQLFFFHFLGCAECFL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15942    91 YTVMAYDRFLAICKPLHYSTIMNHRACLCLSLGTWLGGCLHSTFQTSLTFRLPYGQKNEVDYIFCDIPAMLKLACADTAF 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYS-VILVMLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPFTSFPMDKAVSI 273
Cdd:cd15942   171 NELVTFIDIGLVAMTCFLLILMSYVyIVSAILKIPSAEGQRRAFSTCTAHLTVVVIYYVPLTFIYLRPGSQDPLDGVVAV 250
                         250       260
                  ....*....|....*....|....*
gi 1191819213 274 SHTVLTPMLNPLIYTLRNQEMQAAV 298
Cdd:cd15942   251 FYTTVTPLLNPVIYTLRNKEMKDAL 275
7tmA_OR5AR1-like cd15944
olfactory receptor subfamily 5AR1 and related proteins, member of the class A family of ...
12-301 4.63e-77

olfactory receptor subfamily 5AR1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AR1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320610 [Multi-domain]  Cd Length: 294  Bit Score: 237.38  E-value: 4.63e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  12 FVFLGLSQTRELQLFLFLVVLFVYTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKT 91
Cdd:cd15944     1 FILLGFTQDPQMQIILFVVFLIIYLVNVVGNLGMIILITTDSQLHTPMYFFLCNLSFCDLGYSSAIAPRMLADFLTKHKV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  92 ISYEGCMAQLFFFHFLGGAMVFFLSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGP 171
Cdd:cd15944    81 ISFSGCATQFAFFVGFVDAECYVLAAMAYDRYVAICNPLLYSTLMSKRVCLQLMAGSYLAGLVNLVIHTTATFSLSFCGS 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 172 NVLDNFYCDVPQVLRLACTDTSVLEFLMISNSGMLVLIWFLFLLISYSVILV-MLGAHSGQARRKAASTCTTHIVVVSMV 250
Cdd:cd15944   161 NIINHFFCDVPPLLALSCSDTHINEILLYVFCGFVEMSSLSIILISYLFILVaILRMRSAEGRRKAFSTCASHFTGVTLF 240
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1191819213 251 FIPSIYLYARPFT--SFPMDKAVSISHTVLTPMLNPLIYTLRNQEMQAAVKRL 301
Cdd:cd15944   241 YGTVIFMYLRPTSvySLDQDKWASVFYTVVIPMLNPLIYSLRNKDVKEAFKKL 293
7tmA_OR5C1-like cd15945
olfactory receptor subfamily 5C1 and related proteins, member of the class A family of ...
12-300 1.83e-76

olfactory receptor subfamily 5C1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5C1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320611  Cd Length: 292  Bit Score: 235.41  E-value: 1.83e-76
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  12 FVFLGLSQTRELQLFLFLVVLFVYTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKT 91
Cdd:cd15945     1 FILLGFTDYLSLKVTLFLVFLLVYLLTLVGNVGMIILIRMDSQLHTPMYYFLSNLSFLDLCYSTAIGPKMLVDLLAKRKS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  92 ISYEGCMAQLFFFHFLGGAMVFFLSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGP 171
Cdd:cd15945    81 IPFYGCALQMFFFAAFADAECLLLAVMAYDRYVAICNPLLYTTAMSRRVCYLLLVGAYLSGMATSLVHTTLTFRLSFCGS 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 172 NVLDNFYCDVPQVLRLACTDTSVLEFLMISNSGMLVLIWFLFLLISYSVILV-MLGAHSGQARRKAASTCTTHIVVVSMV 250
Cdd:cd15945   161 NTINHFFCDIPPLLALSCSDTQINELLLFALCGFIQTSTFLAIIISYCYIIItVLKIRSAEGRFKAFSTCASHLTAVGLF 240
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1191819213 251 FIPSIYLYARPFTSFPM--DKAVSISHTVLTPMLNPLIYTLRNQEMQAAVKR 300
Cdd:cd15945   241 YGTLLFMYLRPSSSYSLdtDKMTSVFYTLVIPMLNPLIYSLRNKDVKEALKK 292
7tmA_OR5G-like cd15414
olfactory receptor subfamily 5G and related proteins, member of the class A family of ...
35-300 7.44e-75

olfactory receptor subfamily 5G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5G and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320536 [Multi-domain]  Cd Length: 285  Bit Score: 231.16  E-value: 7.44e-75
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15414    11 YLITLLGNLGMIILIQVDSRLHTPMYFFLSHLSFVDLCYSSVVTPKMLSDFFVEKKAISFLGCAAQMWFFGLFVAAECFL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15414    91 LASMAYDRYVAICNPLLYTVIMSQRVCVQLVVGPYVVGLLNTTTHTTAAFFLPFCGPNVINHFFCDIPPLLSLSCADTQI 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYSVILV-MLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPFTSFPM--DKAV 271
Cdd:cd15414   171 NKWVLFIMAGALGVLSGLIILVSYIYILIaILRIRSAEGRRKAFSTCSSHLTAVSILYGTLFFIYVRPSSSSSLdlDKVV 250
                         250       260
                  ....*....|....*....|....*....
gi 1191819213 272 SISHTVLTPMLNPLIYTLRNQEMQAAVKR 300
Cdd:cd15414   251 SVFYTAVIPMLNPLIYSLRNKEVKDALRR 279
7tmA_OR8K-like cd15413
olfactory receptor subfamily 8K and related proteins, member of the class A family of ...
35-300 1.55e-74

olfactory receptor subfamily 8K and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8K, 8U, 8J, 5R, 5AL and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320535  Cd Length: 279  Bit Score: 230.29  E-value: 1.55e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15413    11 YLTTVMGNLGMIILTRLDSRLQTPMYFFLRHLAFVDLGYSTAVTPKMLVNFVVEQNTISFYACATQLAFFLTFIISELFL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15413    91 LSAMAYDRYVAICNPLLYTVIMSQRVCIVLVAIPYLYSFFVALFHTIKTFRLSFCGSNVINHFYCDDLPLLALSCSDTHE 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYSVILV-MLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPFT--SFPMDKAV 271
Cdd:cd15413   171 KELIILIFAGFNLISSLLIVLVSYLFILSaILRIRSAEGRQKAFSTCGSHLTVVTIFYGTLIFMYLQPKSshSLDTDKMA 250
                         250       260
                  ....*....|....*....|....*....
gi 1191819213 272 SISHTVLTPMLNPLIYTLRNQEMQAAVKR 300
Cdd:cd15413   251 SVFYTLVIPMLNPLIYSLRNKEVKDALKK 279
7tmA_OR10S1-like cd15941
olfactory receptor subfamily 10S1 and related proteins, member of the class A family of ...
35-298 2.58e-74

olfactory receptor subfamily 10S1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10S1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320607 [Multi-domain]  Cd Length: 277  Bit Score: 229.73  E-value: 2.58e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHT-PMYFLLRNLALLDLCFSSVTAPKMLVDLLS-EKKTISYEGCMAQLFFFHFLGGAMV 112
Cdd:cd15941    11 YLLTVLGNLLILLTIGSDPHLHGlPMYHFLGHLSFLDACLSSVTVPKVLAGLLTlSGRTISFEGCVVQLYAFHFLASTEC 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 113 FFLSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDT 192
Cdd:cd15941    91 FLYTVMAYDRYLAICHPLHYPTAMNRRMCAGLAGGTWATGATHAAIHTSLTFRLPYCGPCQIAYFFCDIPPVLKLACADT 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 193 SVLEFLMISNSGMLVLIWFLFLLISYSVIL-VMLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPFTSFPMDKAV 271
Cdd:cd15941   171 TINELVILANIGIVAAGCFLLIVISYIYIVaAVLRIRTAEGRQRAFSTCSAHLTGVLLYYVPSVFIYLQPSSSQAGAGAP 250
                         250       260
                  ....*....|....*....|....*..
gi 1191819213 272 SISHTVLTPMLNPLIYTLRNQEMQAAV 298
Cdd:cd15941   251 AVFYTIVTPMLNPFIYTLRNKEVKRAL 277
7tmA_OR2B2-like cd15432
olfactory receptor subfamily 2B2 and related proteins, member of the class A family of ...
35-298 3.21e-74

olfactory receptor subfamily 2B2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes transmembrane olfactory receptor subfamily 2B2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320549 [Multi-domain]  Cd Length: 277  Bit Score: 229.29  E-value: 3.21e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15432    11 YILTLLGNLAIILVSRLDPQLHTPMYFFLSNLSLLDLCYTTSTVPQMLVNLRSPQKTISYGGCVAQLFIFLGLGSTECVL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15432    91 LAVMAFDRFAAICQPLHYSVIMHQRLCQQLAAGAWISGFANSLVQSTLTLKMPRCGRRRVDHFFCEVPALLKLSCVDTTA 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYSVIL-VMLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPFTSFPMD--KAV 271
Cdd:cd15432   171 NEAELFVISVLLLLIPLGLILISYIFIVrAVLRIRSAEGRRKAFNTCGSHLLVVSLFYGTAISMYLQPPSNSSHDrgKMV 250
                         250       260
                  ....*....|....*....|....*..
gi 1191819213 272 SISHTVLTPMLNPLIYTLRNQEMQAAV 298
Cdd:cd15432   251 ALFYGIITPMLNPLIYTLRNKDVKEAL 277
7tmA_OR2W-like cd15434
olfactory receptor subfamily 2W and related proteins, member of the class A family of ...
35-298 1.48e-73

olfactory receptor subfamily 2W and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2W and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320551 [Multi-domain]  Cd Length: 277  Bit Score: 227.65  E-value: 1.48e-73
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15434    11 YLLTLVGNTTIILVSCLDSRLHTPMYFFLANLSFLDLCFTTSIIPQMLVNLWGPDKTISYVGCAIQLFIALGLGGTECVL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15434    91 LAVMAYDRYAAVCQPLHYTVVMHPRLCWKLVAMSWLIGFGNSLVLSPLTLSLPRCGHHRVDHFFCEMPALIKLACVDTTA 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYSVIL-VMLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPFTSFPMD--KAV 271
Cdd:cd15434   171 YEATIFALGVFILLFPLSLILVSYGYIArAVLKIKSAAGRKKAFGTCGSHLTVVSLFYGTIIYMYLQPKNSVSQDqgKFL 250
                         250       260
                  ....*....|....*....|....*..
gi 1191819213 272 SISHTVLTPMLNPLIYTLRNQEMQAAV 298
Cdd:cd15434   251 TLFYTIVTPSLNPLIYTLRNKDVKGAL 277
7tmA_OR7-like cd15234
olfactory receptor family 7 and related proteins, member of the class A family of ...
35-298 1.65e-73

olfactory receptor family 7 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 7 and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320362 [Multi-domain]  Cd Length: 277  Bit Score: 227.46  E-value: 1.65e-73
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15234    11 YLVTVLGNLLIILAVSSDSHLHTPMYFFLSNLSFADICFSSTTVPKMLVNIQTQSKSISYTGCLTQMCFFLLFGGLDNFL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15234    91 LAVMAYDRYVAICHPLHYTVIMNPCLCGLLVLLSLLISILDSLLHSLMVLQLSFCTDVEIPHFFCELAQVLKLACSDTLI 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYSVIL-VMLGAHSGQARRKAASTCTTHIVVVSM-------VFIPSIylyarpFTSFP 266
Cdd:cd15234   171 NNILIYLATVIFGGIPLSGIIFSYYKIVsSILRIPSSGGKYKAFSTCGSHLSVVSLfygtglgVYISSA------VTHSS 244
                         250       260       270
                  ....*....|....*....|....*....|...
gi 1191819213 267 MDKAV-SISHTVLTPMLNPLIYTLRNQEMQAAV 298
Cdd:cd15234   245 RKTAVaSVMYTVVTPMLNPFIYSLRNKDMKGAL 277
7tmA_OR5M-like cd15412
olfactory receptor subfamily 5M and related proteins, member of the class A family of ...
35-300 3.44e-73

olfactory receptor subfamily 5M and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5M and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320534  Cd Length: 279  Bit Score: 226.90  E-value: 3.44e-73
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15412    11 YLITLLGNLGMILLIRLDSRLHTPMYFFLSHLSFVDLCYSSNVTPKMLVNFLSEKKTISFAGCFTQCYFFIALVITEYYM 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15412    91 LAVMAYDRYMAICNPLLYSVKMSRRVCISLVTFPYIYGFLNGLIQTILTFRLSFCGSNVINHFYCADPPLIKLSCSDTYV 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYSVILV-MLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPFT--SFPMDKAV 271
Cdd:cd15412   171 KETAMFIVAGFNLSSSLLIILISYLFILIaILRIRSAEGRCKAFSTCGSHLTAVTIFYGTLFCMYLRPPSeeSVEQSKIV 250
                         250       260
                  ....*....|....*....|....*....
gi 1191819213 272 SISHTVLTPMLNPLIYTLRNQEMQAAVKR 300
Cdd:cd15412   251 AVFYTFVSPMLNPLIYSLRNKDVKQALKK 279
7tmA_OR11G-like cd15913
olfactory receptor OR11G and related proteins, member of the class A family of ...
35-291 4.89e-73

olfactory receptor OR11G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 11G, 11H, and related proteins in other mammals, and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320579  Cd Length: 270  Bit Score: 226.04  E-value: 4.89e-73
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15913    11 YILTLLGNGAIICAVWWDRRLHTPMYILLGNFSFLEICYVTSTVPNMLVNFLSETKTISFSGCFLQFYFFFSLGTTECFF 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15913    91 LSVMAFDRYLAICRPLHYPTIMTGQLCGKLVAFCWVCGFLWFLIPVVLISQLPFCGPNIIDHFLCDPGPLLALSCVPAPG 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYS-VILVMLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPFTSFP--MDKAV 271
Cdd:cd15913   171 TELICYTLSSLIIFGTFLFILGSYTlVLRAVLRVPSAAGRHKAFSTCGSHLAVVSLFYGSVMVMYVSPGSGNStgMQKIV 250
                         250       260
                  ....*....|....*....|
gi 1191819213 272 SISHTVLTPMLNPLIYTLRN 291
Cdd:cd15913   251 TLFYSVVTPLLNPLIYSLRN 270
7tmA_OR8D-like cd15406
olfactory receptor subfamily 8D and related proteins, member of the class A family of ...
16-301 2.30e-72

olfactory receptor subfamily 8D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8D and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320528 [Multi-domain]  Cd Length: 290  Bit Score: 224.94  E-value: 2.30e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  16 GLSQTRELQLFLFLVVLFVYTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYE 95
Cdd:cd15406     1 GLTDQPELQLPLFLLFLGIYVVTVVGNLGMILLITLSSQLHTPMYYFLSNLSFIDLCYSSVITPKMLVNFVSEKNIISYP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  96 GCMAQLFFFHFLGGAMVFFLSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLD 175
Cdd:cd15406    81 ECMTQLFFFCVFAIAECYMLTAMAYDRYVAICNPLLYNVTMSPRVCSLLVAGVYIMGLIGATVHTSCMLRLSFCGDNVIN 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 176 NFYCDVPQVLRLACTDTSVLEFLMISNSGMLVLIWFLFLLISYSVILV-MLGAHSGQARRKAASTCTTHIVVVSMVFIPS 254
Cdd:cd15406   161 HYFCDILPLLKLSCSSTYINELLLFIVGGFNVLATTLAILISYAFILSsILRIRSAEGRSKAFSTCSSHLAAVGVFYGSI 240
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 1191819213 255 IYLYARPFTSFPMD--KAVSISHTVLTPMLNPLIYTLRNQEMQAAVKRL 301
Cdd:cd15406   241 IFMYLKPSSSSSMTqeKVSSVFYTTVIPMLNPLIYSLRNKDVKNALKKV 289
7tmA_OR9G-like cd15418
olfactory receptor subfamily 9G and related proteins, member of the class A family of ...
35-301 6.21e-72

olfactory receptor subfamily 9G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 9G and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320540 [Multi-domain]  Cd Length: 281  Bit Score: 223.51  E-value: 6.21e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15418    12 YILTLVGNLTLIALICLDSRLHTPMYFFVGNLSFLDLWYSSVYTPKILADCISKDKSISFAGCAAQFFFSAGLAYSECFL 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15418    92 LAAMAYDRYVAICNPLLYSSAMSKKLCMGLVAASYLGGFANAIIHTSNTFRLHFCGDNIIDHFFCDLPPLVKLACDDTRV 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYSVILV-MLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPFTS--FPMDKAV 271
Cdd:cd15418   172 YELILYFILGFNVIAPTALILASYTFILAaILRIHSASGRHKAFSTCSAHLTSVTLYYGSILFIYSRPSSShtPDRDKVV 251
                         250       260       270
                  ....*....|....*....|....*....|
gi 1191819213 272 SISHTVLTPMLNPLIYTLRNQEMQAAVKRL 301
Cdd:cd15418   252 ALFYTVVNPLLNPLIYSLRNKDVKEALKKL 281
7tmA_OR2D-like cd15428
olfactory receptor subfamily 2D and related proteins, member of the class A family of ...
35-298 1.28e-70

olfactory receptor subfamily 2D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320545 [Multi-domain]  Cd Length: 277  Bit Score: 220.04  E-value: 1.28e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15428    11 YLMTVLGNLLLVLLVIVDSHLHTPMYFFLSNLSVLELCYTTTVVPQMLVHLLSERKIISFIRCAAQLYFFLSFGITECAL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15428    91 LSVMSYDRYVAICLPLRYSLIMTWKVCISLATGSWVGGLLVSAVDTAFTLNLSFGGHNKINHFLCEMPALLKLASTDTHQ 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYS-VILVMLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARP--FTSFPMDKAV 271
Cdd:cd15428   171 AEMAMFIMCVFTLVLPVLLILASYTrIIYTVFGMQSLTGRLKAFSTCSSHLMVVSLFYGSVLSTYMRPksSTSKEYDKMI 250
                         250       260
                  ....*....|....*....|....*..
gi 1191819213 272 SISHTVLTPMLNPLIYTLRNQEMQAAV 298
Cdd:cd15428   251 SVFYIIVTPMLNPLIYSLRNKEVKHAL 277
7tmA_OR2_unk cd15424
olfactory receptor family 2, unknown subfamily, member of the class A family of ...
35-298 3.15e-70

olfactory receptor family 2, unknown subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents an unknown subfamily, conserved in some mammalia and sauropsids, in family 2 of olfactory receptors. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320544 [Multi-domain]  Cd Length: 277  Bit Score: 219.22  E-value: 3.15e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15424    11 YLLTILGNLVIIILVQTDSRLHTPMYFFLSHLAGLEICYVTSTLPQMLAHLLAGNGAISFARCTTQMYIALSLGSTECLL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15424    91 LGAMAYDRYLAICHPLLYAAAMGRWRQLQLALSCWAIGFLLSVINVGCTLRHPFCGPNHINHFFCELPVVLKLACADTHI 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYSVIL-VMLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPF--TSFPMDKAV 271
Cdd:cd15424   171 TEAIVFGAGVLILLVPLSVILTSYGLILaSVLQMQSAAGRHKAFSTCASHLAVVTLFYGTVISMYMRPRsgSTPDRDKQI 250
                         250       260
                  ....*....|....*....|....*..
gi 1191819213 272 SISHTVLTPMLNPLIYTLRNQEMQAAV 298
Cdd:cd15424   251 AVFYIVITPLLNPIIYTLRNKDVHGAA 277
7tmA_OR13-like cd15430
olfactory receptor family 13 and related proteins, member of the class A family of ...
35-291 8.07e-70

olfactory receptor family 13 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 13 (subfamilies 13C, 13D, 13F, and 13J), some subfamilies from OR family 2 (2K and 2S), and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320547 [Multi-domain]  Cd Length: 270  Bit Score: 218.01  E-value: 8.07e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGN-LLITVTVTsDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVF 113
Cdd:cd15430    11 YLVILLGNgVLIIITIL-DSHLHTPMYFFLGNLSFLDICYTSSSVPLMLVNFLSERKTISFSGCAVQMYLSLAMGSTECV 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 114 FLSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTS 193
Cdd:cd15430    90 LLAVMAYDRYVAICNPLRYPIIMNKRLCVQMAAGSWVTGFLNSLVETVLAMQLPFCGNNVINHFTCEILAVLKLACVDIS 169
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 194 VLEFLMISNSGMLVLIWFLFLLISYSVILV-MLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPFT--SFPMDKA 270
Cdd:cd15430   170 LNEIIMLVGNIIFLVIPLLLICISYIFILStILRINSAEGRKKAFSTCSAHLTVVIIFYGTILFMYMKPKSknAQISDKL 249
                         250       260
                  ....*....|....*....|.
gi 1191819213 271 VSISHTVLTPMLNPLIYTLRN 291
Cdd:cd15430   250 ITLFYGVVTPMLNPIIYSLRN 270
7tmA_OR3A-like cd15233
olfactory receptor subfamily 3A3 and related proteins, member of the class A family of ...
35-297 5.17e-69

olfactory receptor subfamily 3A3 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 3A3 and 3A4, and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320361 [Multi-domain]  Cd Length: 277  Bit Score: 216.20  E-value: 5.17e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15233    11 YIVTIGGNLSILAAILLEPKLHTPMYFFLGNLSLLDIGCISVTVPQMLVHLLSHKRTISYAACLSQLFFFHLLAGADCFL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15233    91 LTAMAYDRYLAICQPLTYSVRMSWRVQTALVGISCACAFTNALTHTVAMSTLKFCGPNVINHFFCDLPPLFQLSCSSTHL 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYS-VILVMLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPFT--SFPMDKAV 271
Cdd:cd15233   171 NELLLFVFAFFMALAPCVLIVVSYAhVVAAVLRIRSAEGRRKAFSTCGSHLTVVCIFYGTGVFSYMRLGSvySSDKDKVI 250
                         250       260
                  ....*....|....*....|....*.
gi 1191819213 272 SISHTVLTPMLNPLIYTLRNQEMQAA 297
Cdd:cd15233   251 GILNTVLSPMLNPLIYSLRNKDVKGA 276
7tmA_OR1E-like cd15236
olfactory receptor subfamily 1E and related proteins, member of the class A family of ...
35-298 5.44e-69

olfactory receptor subfamily 1E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 1E, 1J, and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320364 [Multi-domain]  Cd Length: 277  Bit Score: 215.79  E-value: 5.44e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15236    11 YLTTVLGNLLIILLIRLDSHLHTPMYFFLSHLAFTDVSFSSVTVPKMLMNMQTQDQSIPYAGCISQMYFFIFFGCLDSFL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15236    91 LAVMAYDRYVAICHPLHYTAIMRPELCVLLVAGSWVLTCFHALLHTLLLARLSFCADNVIPHFFCDLVALLKLSCSSTSL 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISY-SVILVMLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPFTSFPMDK--AV 271
Cdd:cd15236   171 NELVIFTEGGLLFVLPLLLILGSYiRIAATILKVPSTKGICKAFSTCGSHLSVVFLYYGTIIGVYFFPSSNNSSDKdiVA 250
                         250       260
                  ....*....|....*....|....*..
gi 1191819213 272 SISHTVLTPMLNPLIYTLRNQEMQAAV 298
Cdd:cd15236   251 SVMYTVVTPMLNPFIYSLRNRDIKGAL 277
7tmA_OR5B-like cd15407
olfactory receptor subfamily 5B and related proteins, member of the class A family of ...
35-300 2.56e-68

olfactory receptor subfamily 5B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5B and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320529  Cd Length: 279  Bit Score: 214.21  E-value: 2.56e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15407    11 YLITLVGNLGMILLILLDSRLHTPMYFFLSNLSLVDIGYSSAVTPKVMAGLLTGDKVISYNACAAQMFFFVVFATVENFL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15407    91 LASMAYDRHAAVCKPLHYTTTMTTKVCACLTIGCYVCGFLNASIHTGNTFRLSFCKSNVINHFFCDIPPVLALSCSDIHI 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYSVILV-MLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPFTSFPM--DKAV 271
Cdd:cd15407   171 SEIVLFFLASFNVFFALLVILISYLFIFItILRMRSAEGHQKAFSTCASHLTAVSIFYGTVIFMYLQPSSSHSMdtDKMA 250
                         250       260
                  ....*....|....*....|....*....
gi 1191819213 272 SISHTVLTPMLNPLIYTLRNQEMQAAVKR 300
Cdd:cd15407   251 SVFYTMVIPMLNPLVYSLRNKEVKSAFKK 279
7tmA_OR1330-like cd15946
olfactory receptor 1330 and related proteins, member of the class A family of ...
35-291 4.44e-68

olfactory receptor 1330 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes olfactory receptors 1330 from mouse, Olr859 from rat, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320612  Cd Length: 270  Bit Score: 213.49  E-value: 4.44e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15946    11 YLSILLGNGLIITLICLDSRLHTPMYFFLSVLSLLDMSYVTTTVPQMLVHLLSHKKTISFTGCVAQMYIFLALGITECTL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15946    91 FSVMAYDRYVAICHPLRYKVIMSWGLCILMVAGSWVCGVFSSLLHTFFTMRLPYCGPNEINHYFCEVPAVLKLACADTSL 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYSVIL-VMLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPFTSFP--MDKAV 271
Cdd:cd15946   171 NEMVDFVLGVIVLVVPLSLILASYVNIFkAILKIRSTQGRCKAFSTCASHITVVTMFYGPAMFMYMRPGSNYSpeRDKKI 250
                         250       260
                  ....*....|....*....|
gi 1191819213 272 SISHTVLTPMLNPLIYTLRN 291
Cdd:cd15946   251 SLFYNVFTALLNPVIYSLRN 270
7tmA_OR8B-like cd15405
olfactory receptor subfamily 8B and related proteins, member of the class A family of ...
35-298 1.75e-67

olfactory receptor subfamily 8B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8B and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320527 [Multi-domain]  Cd Length: 277  Bit Score: 212.28  E-value: 1.75e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15405    11 YVVTVVGNLGLITLICLNSHLHTPMYFFLFNLSFIDLCYSSVFTPKMLMNFVSEKNTISYAGCMTQLFFFCFFVISECYV 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15405    91 LTAMAYDRYVAICNPLLYTVTMSPQVCSLLMLGSYVMGFAGAMAHTGCMLRLTFCDSNIINHYMCDILPLLQLSCTSTYV 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYSVILV-MLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPFTSFPMD--KAV 271
Cdd:cd15405   171 NELVVFVVVGINIIVPSVTIFISYALILSnILHISSTEGRSKAFSTCSSHIIAVSLFFGSGAFMYLKPSSVGSVNqgKVS 250
                         250       260
                  ....*....|....*....|....*..
gi 1191819213 272 SISHTVLTPMLNPLIYTLRNQEMQAAV 298
Cdd:cd15405   251 SVFYTNVVPMLNPLIYSLRNKDVKLAL 277
7tmA_OR2Y-like cd15433
olfactory receptor subfamily 2Y and related proteins, member of the class A family of ...
35-298 1.24e-63

olfactory receptor subfamily 2Y and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2Y, 2I, and related protein in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320550 [Multi-domain]  Cd Length: 277  Bit Score: 202.33  E-value: 1.24e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15433    11 YLLTLVGNTIIILLSVRDLRLHTPMYYFLCHLSFVDLCFTTSTVPQLLANLRGPALTITRGGCVAQLFISLALGSAECVL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15433    91 LAVMAFDRYAAVCRPLHYAALMSPRLCQTLASISWLSGFVNSVAQTGLLAERPLCGHRLLDHFFCEMPVFLKLACGDDET 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISY-SVILVMLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPFTSFPMD--KAV 271
Cdd:cd15433   171 TEVQMFVARVVILLLPAALILGSYgHVAHAVLRIKSSAGRRRAFGTCGSHLMVVFLFYGSAIYTYLQPIHRYSQAhgKFV 250
                         250       260
                  ....*....|....*....|....*..
gi 1191819213 272 SISHTVLTPMLNPLIYTLRNQEMQAAV 298
Cdd:cd15433   251 SLFYTVMTPALNPLIYTLRNKDVKGAL 277
7tmA_OR56-like cd15223
olfactory receptor family 56 and related proteins, member of the class A family of ...
35-298 1.42e-51

olfactory receptor family 56 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 56 and related proteins in other mammals, sauropsids, and fishes. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320351 [Multi-domain]  Cd Length: 279  Bit Score: 171.32  E-value: 1.42e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15223    11 YLVALVANSLLLLIIKLERSLHQPMYILLGILAAVDIVLATTILPKMLAIFWFDANTISLPGCFAQMFFIHFFTAMESSI 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15223    91 LLVMALDRYVAICKPLRYPSIITKSFILKLVLFALIRSGLLVLPIVVLASQLSYCSSNVIEHCYCDHMALVSLACGDTTI 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYSVIL-VMLGAHSGQARRKAASTCTTHIVVVsMVF---IPSIYLYARPFTSFPMDKA 270
Cdd:cd15223   171 NSIYGLAVAWLIVGSDIILIFFSYALILrAVLRLASGEARSKALNTCGSHLIVI-LFFytaVLVSSLTYRFGKTIPPDVH 249
                         250       260       270
                  ....*....|....*....|....*....|
gi 1191819213 271 V--SISHTVLTPMLNPLIYTLRNQEMQAAV 298
Cdd:cd15223   250 VllSVLYILIPPALNPIIYGVRTKEIRQGF 279
7tmA_OR51_52-like cd15917
olfactory receptor family 51, 52, 56 and related proteins, member of the class A family of ...
35-294 5.20e-44

olfactory receptor family 51, 52, 56 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 51, 52, 56, and related proteins in other mammals, sauropsids, amphibians, and fishes. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 341351  Cd Length: 275  Bit Score: 151.67  E-value: 5.20e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15917    11 YLVALLGNITILFVIKIESSLHEPMYLFLAMLAATDLVLSTSTVPKMLGIFWFNAREISFDACLAQMFFIHSFTAMESGV 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15917    91 LLAMAFDRYVAICYPLRYTTILTNTVVGKIGLAILLRAVALIIPLPLLVRRLPYCGSNVISHSYCEHMAVVKLACGDTRV 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYSVIL-VMLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPFTSFPMDKAVSI 273
Cdd:cd15917   171 NSIYGLFVALLIVGFDLLFIALSYVLILrAVLQLPSKEARLKALSTCGSHICVILIFYTPALFSFLTHRFGHHVPPHVHI 250
                         250       260
                  ....*....|....*....|....*
gi 1191819213 274 ----SHTVLTPMLNPLIYTLRNQEM 294
Cdd:cd15917   251 llanLYLLLPPMLNPIVYGVRTKQI 275
7tmA_OR52I-like cd15950
olfactory receptor subfamily 52I and related proteins, member of the class A family of ...
35-294 1.04e-41

olfactory receptor subfamily 52I and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52I and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320616  Cd Length: 275  Bit Score: 145.63  E-value: 1.04e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15950    11 YVIALLGNGTILLVIKLDPSLHEPMYYFLCMLAVIDLVMSTSIVPKMLSIFWLGSAEISFEACFTQMFFVHSFTAVESGV 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15950    91 LLAMAFDRYVAICHPLRYSAILTSQVIAQIGLAIVLRALLFMTPLTCLVTSLPYCGSRVVPHSYCEHMAVVKLACADPRP 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYSVIL-VMLGAHSGQARRKAASTCTTHIVVVSMVFIPSIY-LYARPF-TSFPMDKAV 271
Cdd:cd15950   171 SSLYSITGSTLVVGTDSAFIAVSYGLILrAVLGLSSKEARLKAFSTCGSHVCVILLFYIPGLLsIYTQRFgQGVPPHTQV 250
                         250       260
                  ....*....|....*....|....*
gi 1191819213 272 SIS--HTVLTPMLNPLIYTLRNQEM 294
Cdd:cd15950   251 LLAdlYLLVPPMLNPIIYGMRTKQI 275
7tmA_OR52B-like cd15221
olfactory receptor subfamily 52B and related proteins, member of the class A family of ...
35-293 1.11e-40

olfactory receptor subfamily 52B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor (OR) subfamilies 52B, 52D, 52H and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320349  Cd Length: 275  Bit Score: 142.81  E-value: 1.11e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15221    11 YIVALLGNSLLLFVIVTERSLHEPMYLFLSMLAVTDLLLSTTTVPKMLAIFWFGAGEISFDGCLTQMFFVHFVFVTESAI 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15221    91 LLAMAFDRYVAICYPLRYTTILTHSVIGKIGVAAVARSFCIVFPFVFLLKRLPYCGHNVIPHTYCEHMGIARLACADITV 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYSVIL-VMLGAHSGQARRKAASTCTTHIVVVSMVFIPSIylyarpFTSFPMDKAVSI 273
Cdd:cd15221   171 NIWYGLTVALLTVGLDVVLIAVSYALILrAVFRLPSKDARLKALSTCGSHVCVILMFYTPAF------FSFLTHRFGRHI 244
                         250       260       270
                  ....*....|....*....|....*....|
gi 1191819213 274 SHTV----------LTPMLNPLIYTLRNQE 293
Cdd:cd15221   245 PRHVhillanlyvlVPPMLNPIVYGVKTKQ 274
7tmA_OR51-like cd15222
olfactory receptor family 51 and related proteins, member of the class A family of ...
35-293 2.47e-40

olfactory receptor family 51 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 51 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320350  Cd Length: 275  Bit Score: 141.87  E-value: 2.47e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15222    11 YLVALLGNSTILFVIKTEPSLHEPMYYFLSMLAVTDLGLSLSTLPTVLGIFWFNAREISFDACLAQMFFIHTFSFMESSV 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15222    91 LLAMAFDRFVAICNPLRYASILTNSRIAKIGLAIVLRSVLLLLPLPFLLKRLPFCHSNVLSHSYCLHQDVMKLACSDTRV 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LE----FLMISNSGMLvliwFLFLLISYSVIL-VMLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYA--RPFTSFPm 267
Cdd:cd15222   171 NSiyglFVVLSTMGLD----SLLILLSYVLILkTVLGIASREERLKALNTCVSHICAVLIFYVPMIGLSMvhRFGKHAS- 245
                         250       260       270
                  ....*....|....*....|....*....|...
gi 1191819213 268 dkavSISHTVL-------TPMLNPLIYTLRNQE 293
Cdd:cd15222   246 ----PLVHVLManvyllvPPVLNPIIYSVKTKQ 274
7tmA_OR52E-like cd15952
olfactory receptor subfamily 52E and related proteins, member of the class A family of ...
35-294 2.25e-39

olfactory receptor subfamily 52E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52E and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320618  Cd Length: 274  Bit Score: 139.44  E-value: 2.25e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15952    11 YLIALLGNCTILFVIKTEQSLHQPMFYFLAMLSTIDLGLSTATIPKMLGIFWFNLREISFGGCLAQMFFIHTFTGMESAV 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15952    91 LVAMAFDRYVAICNPLRYTTILTNKVISVIALGIVLRPLLLVLPFVFLILRLPFCGHNIIPHTYCEHMGIAKLACASIRI 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 -LEFLMISNSGMLVLIwfLFLLISYSVIL-VMLGAHSGQARRKAASTCTTHIVVVSMVFIPSI--YLYARPFTSFP--MD 268
Cdd:cd15952   171 nIIYGLFAISVLVLDV--ILIALSYVLILrAVFRLPSHDARLKALSTCGSHVCVILAFYTPALfsFLTHRFGHNIPryIH 248
                         250       260
                  ....*....|....*....|....*.
gi 1191819213 269 KAVSISHTVLTPMLNPLIYTLRNQEM 294
Cdd:cd15952   249 ILLANLYVVLPPMLNPVIYGVRTKQI 274
7tmA_OR52R_52L-like cd15951
olfactory receptor subfamily 52R, 52L, and related proteins, member of the class A family of ...
35-293 4.83e-35

olfactory receptor subfamily 52R, 52L, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamilies 52R, 52L and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320617  Cd Length: 275  Bit Score: 128.23  E-value: 4.83e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15951    11 YAVALLGNFTILFIVKTEPSLHEPMYLFLCMLAITDLVLSTSTLPKMLSIFWFNSREIDFSACLTQMFFIHSFSTMESGI 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15951    91 FVAMALDRYVAICNPLRHSTILTNSVVAKIGLAVVLRGGILVSPHPFLLRRLPYCRTNIIPHTYCEHMAVVKLACADTRV 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LeflmiSNSGMLVLIW-----FLFLLISYSVIL-VMLGAHSGQARRKAASTCTTHIVVVSMVFIPSIY--LYARPFTSFP 266
Cdd:cd15951   171 S-----RAYGLSVAFLvggldVIFIAVSYIQILrAVFKLPSKEARLKTFGTCGSHICVILVFYIPALFsfLTHRFGHNVP 245
                         250       260
                  ....*....|....*....|....*....
gi 1191819213 267 MDKAVSISHTVL--TPMLNPLIYTLRNQE 293
Cdd:cd15951   246 PHVHILIANVYLlvPPMLNPIIYGVRTKQ 274
7tmA_OR52P-like cd15953
olfactory receptor subfamily 52P and related proteins, member of the class A family of ...
35-293 2.44e-33

olfactory receptor subfamily 52P and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52P and related proteins in other mammals, sauropsids and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 341354  Cd Length: 275  Bit Score: 123.53  E-value: 2.44e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15953    11 YIVTLLGNCTILFVVGKEQSLHKPMYLLLCMLALTDLVLSTSVVPKALCIFWFNLKEITFSGCLTQMFFIHTLSIMESAV 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLvvaswvgGFVHSISQLALMLP-------LPFCGPNVLDNFYCDVPQVLRL 187
Cdd:cd15953    91 LVAMAFDRYVAICNPLRYATILTNSRIAKL-------GLVGLIRGVLLILPlplllsrLPFCANRIIPHTYCEHMAVVKL 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 188 ACTDTSVLEFLMISNSGMLVLIWFLFLLISYSVIL-VMLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYlyarPFTSFP 266
Cdd:cd15953   164 ACGDTTINRIYGLVVALLVVGLDLLLIALSYALIIrAVLRLSSKKARQKALNTCTAHICVILMSYTPALF----SFLTHR 239
                         250       260       270
                  ....*....|....*....|....*....|....*
gi 1191819213 267 MDKAVSIS-HTVLT-------PMLNPLIYTLRNQE 293
Cdd:cd15953   240 FGQGIAPHiHIILAnlyllvpPMLNPIIYGVKTKE 274
7tm_4 pfam13853
Olfactory receptor; The members of this family are transmembrane olfactory receptors.
35-301 9.98e-32

Olfactory receptor; The members of this family are transmembrane olfactory receptors.


Pssm-ID: 404695  Cd Length: 278  Bit Score: 119.53  E-value: 9.98e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:pfam13853   5 YLIIFLGNGTILFVIKTESSLHQPMYLFLAMLALIDLGLSASTLPTVLGIFWFGLREISFEACLTQMFFIHKFSIMESAV 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:pfam13853  85 LLAMAVDRFVAICSPLRYTTILTNPVISRIGLGVSVRSFILVLPLPFLLRRLPFCGHHVLSHSYCLHMGLARLSCADIKV 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LE----FLMISNSGMLVLIwflfLLISYSVIL-VMLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYARPFTSFPMDK 269
Cdd:pfam13853 165 NNiyglFVVTSTFGIDSLL----IVLSYGLILrTVLGIASREGRLKALNTCGSHVCAVLAFYTPMIGLSMVHRFGHNVPP 240
                         250       260       270
                  ....*....|....*....|....*....|....*.
gi 1191819213 270 AVSI----SHTVLTPMLNPLIYTLRNQEMQAAVKRL 301
Cdd:pfam13853 241 LLQImmanAYLFFPPVLNPIVYSVKTKQIRDCVKRM 276
7tmA_OR52K-like cd15948
olfactory receptor subfamily 52K and related proteins, member of the class A family of ...
35-295 1.32e-30

olfactory receptor subfamily 52K and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52K and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320614 [Multi-domain]  Cd Length: 277  Bit Score: 116.54  E-value: 1.32e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15948    12 FTVALLGNCTLLYVIKTEPSLHEPMFYFLAMLAVIDLVLSTTTVPKILSIFWFNSREINFNACLVQMFFLHSFSIMESAV 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15948    92 LLAMAFDRYVAICNPLRYATILTNSVITKIGLAALARAVTLMTPLPFLLRRLPYCRSHVIAHCYCEHMAVVKLACGDTRF 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYSVIL-VMLGAHSGQARRKAASTCTTHIVVVSMVFIP-----SIYLYARPFTSFpMD 268
Cdd:cd15948   172 NNIYGIAVALFIVGLDLMFIILSYVFILrAVLSLASKEEQLKAFGTCGSHICAILVFYTPvvlssTMHRFARHVAPH-VH 250
                         250       260
                  ....*....|....*....|....*..
gi 1191819213 269 KAVSISHTVLTPMLNPLIYTLRNQEMQ 295
Cdd:cd15948   251 ILLANFYLLFPPMMNPIVYGVKTKQIR 277
7tmA_OR52M-like cd15949
olfactory receptor subfamily 52M and related proteins, member of the class A family of ...
10-295 1.80e-30

olfactory receptor subfamily 52M and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52M and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320615  Cd Length: 292  Bit Score: 116.42  E-value: 1.80e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  10 SEFVFLGLSQTRELQLFLFLVVLFVYTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEK 89
Cdd:cd15949     2 STFILLGIPGLEPLHVWISIPFCSMYLIAVLGNCTILFIIKSEPSLHQPMYFFLSMLAIIDLVLSTSTMPKLLAIFWFSS 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  90 KTISYEGCMAQLFFFHFLGGAMVFFLSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHsISQLALMLP-LPF 168
Cdd:cd15949    82 NEIPLHACLLQMFLIHSFSAIESGIFLAMAFDRYVAICNPLRHKTILTNTTVIRIGLAAVIRGVLY-ISPLPLLVRrLPW 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 169 CGPNVLDNFYCDVPQVLRLACTDTSVLEFLMISNSGMLVLIWFLFLLISYSVIL-VMLGAHSGQARRKAASTCTTHIVVV 247
Cdd:cd15949   161 YRTNIIAHSYCEHMAVVGLACGDVSINNHYGLTIGFLVLIMDSLFIVLSYIMILrVVQRLATSEARLKTFGTCVSHVCAI 240
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1191819213 248 SMVFIPS-----IYLYARPfTSFPMDKAVSISHTVLTPMLNPLIYTLRNQEMQ 295
Cdd:cd15949   241 LAFYVPIavsslIHRFGQN-VPPPTHILLANFYLLIPPMLNPIVYGVRTKQIQ 292
7tmA_OR52W-like cd15956
olfactory receptor subfamily 52W and related proteins, member of the class A family of ...
35-294 9.89e-30

olfactory receptor subfamily 52W and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52W and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320622 [Multi-domain]  Cd Length: 275  Bit Score: 114.19  E-value: 9.89e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15956    11 YVLSLLGNGVLLSVVWKEHRLHQPMFLFLAMLAATDLVLALSTAPKLLAILWFGATAISSYVCLSQMFLVHAFSAMESGV 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMnTQLCVGLVvaswvgGFVHSISQLALMLPLP-------FCGPNVLDNFYCDVPQVLRL 187
Cdd:cd15956    91 LVAMALDRFVAICNPLHYATIL-TLEVVAKA------GLLLALRGVAIVIPFPllvcrlsFCASHTIAHTYCEHMAVVKL 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 188 ACTDTSVLEFLMISNSGMLVLIWFLFLLISYSVIL-VMLGAHSGQARRKAASTCTTHIVVVSMVFIPSIYLYA----RPF 262
Cdd:cd15956   164 ACGATTVDSLYGLALALFIGGGDVLFIAYSYGLIVkTVLRLPSPEARGKAFSTCSAHICVILFFYIPGLLSVLmhrfGHS 243
                         250       260       270
                  ....*....|....*....|....*....|..
gi 1191819213 263 TSFPMDKAVSISHTVLTPMLNPLIYTLRNQEM 294
Cdd:cd15956   244 VPSAAHVLLSNLYLLLPPALNPIVYGIRTKQI 275
7tmA_OR52N-like cd15954
olfactory receptor subfamily 52N and related proteins, member of the class A family of ...
35-294 2.46e-26

olfactory receptor subfamily 52N and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52N and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320620  Cd Length: 276  Bit Score: 104.91  E-value: 2.46e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15954    11 YIIAMVGNCGLLYLIWIEEALHRPMYYFLSMLSFTDITLCTTMVPKAMCIFWFNLKEISFNACLVQMFFVHTFTGMESGV 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTSV 194
Cdd:cd15954    91 LMLMALDRYVAICYPLRYATILTNPVITKAGLATFLRGVMLIIPFPLLTKRLPYCRGNFIPHTYCDHMSVVKLACANIRV 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 195 LEFLMISNSGMLVLIWFLFLLISYSVIL-VMLGAHSGQARRKAASTCTTHIVVVSMVFIPSIY-LYARPFTSFPMDKAVS 272
Cdd:cd15954   171 DAIYGLMVALLIGGFDILCISVSYAMILrAVVSLSSKEARSKAFSTCTAHICAIVITYTPAFFtFFAHRFGGHHITPHIH 250
                         250       260
                  ....*....|....*....|....*.
gi 1191819213 273 IS----HTVLTPMLNPLIYTLRNQEM 294
Cdd:cd15954   251 IImanlYLLLPPMMNPIVYGVKTKQI 276
7tmA_OR52A-like cd15955
olfactory receptor subfamily 52A and related proteins, member of the class A family of ...
35-294 5.32e-21

olfactory receptor subfamily 52A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52A and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320621 [Multi-domain]  Cd Length: 276  Bit Score: 90.60  E-value: 5.32e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  35 YTTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFF 114
Cdd:cd15955    11 FLLAVLGNCTLLIVIKRERSLHQPMYIFLAMLAATDLGLCPCILPKMLAIFWFQLREISFNACLAQMFFIHTLQAFESGI 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 115 LSVMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWV-GGFVHSISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACTDTS 193
Cdd:cd15955    91 LLAMALDRYVAICHPLRHSSILTPQVLLGIGVLVVVrAVVLIIPCPLLIKLRLHHFRSTVISHSYCEHMAVVKLAADDVR 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 194 VLEFLmisnsGMLV---LIWF--LFLLISYSVILVMLGAHSG-QARRKAASTCTTHIVVVSMVFIPSIYLYARPFTSFPM 267
Cdd:cd15955   171 VNKIY-----GLFVafsILGFdiIFITTSYALIFRAVFRLPQkEARLKAFNTCTAHIFVFLLFYTLAFFSFFAHRFGHHV 245
                         250       260       270
                  ....*....|....*....|....*....|.
gi 1191819213 268 DKAVSI----SHTVLTPMLNPLIYTLRNQEM 294
Cdd:cd15955   246 APYVHIllsnLYLLVPPVLNPIVYGVKTKQI 276
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
41-287 2.81e-19

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 85.43  E-value: 2.81e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  41 GNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLS-EKKTISYEGCMAQLFFFHFLGGAMVFFLSVMA 119
Cdd:pfam00001   1 GNLLVILVILRNKKLRTPTNIFLLNLAVADLLFSLLTLPFWLVYYLNhGDWPFGSALCKIVGALFVVNGYASILLLTAIS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 120 YDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSISQLALMLPLPFCGPNVldnFYCDVPQVlrlacTDTSVLEFLM 199
Cdd:pfam00001  81 IDRYLAIVHPLRYKRRRTPRRAKVLILVIWVLALLLSLPPLLFGWTLTVPEGNV---TVCFIDFP-----EDLSKPVSYT 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 200 ISNSGMLVLIWFLFLLISYSVILVMLGAHSG--------QARRKAASTCTTHIVVVS--------MVFIPSIYLYARPFT 263
Cdd:pfam00001 153 LLISVLGFLLPLLVILVCYTLIIRTLRKSASkqkssertQRRRKALKTLAVVVVVFIlcwlpyhiVNLLDSLALDCELSR 232
                         250       260
                  ....*....|....*....|....*.
gi 1191819213 264 SfpMDKAVSISH--TVLTPMLNPLIY 287
Cdd:pfam00001 233 L--LDKALSVTLwlAYVNSCLNPIIY 256
7tm_classA_rhodopsin-like cd00637
rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor ...
37-291 3.16e-13

rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor superfamily; Class A rhodopsin-like receptors constitute about 90% of all GPCRs. The class A GPCRs include the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. Based on sequence similarity, GPCRs can be divided into six major classes: class A (rhodopsin-like family), class B (Methuselah-like, adhesion and secretin-like receptor family), class C (metabotropic glutamate receptor family), class D (fungal mating pheromone receptors), class E (cAMP receptor family), and class F (frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


Pssm-ID: 410626 [Multi-domain]  Cd Length: 275  Bit Score: 68.47  E-value: 3.16e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  37 TAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFFLS 116
Cdd:cd00637    11 VGLVGNLLVILVILRNRRLRTVTNYFILNLAVADLLVGLLVIPFSLVSLLLGRWWFGDALCKLLGFLQSVSLLASILTLT 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 117 VMAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVHSIsqlalmlpLPFCGPNVLDNFYCDVPqvlRLACTDTSVLE 196
Cdd:cd00637    91 AISVDRYLAIVHPLRYRRRFTRRRAKLLIALIWLLSLLLAL--------PPLLGWGVYDYGGYCCC---CLCWPDLTLSK 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 197 FLMISNSGMLVLIWFLFLLISYSVILVMLGAHSGQARRKAASTC-----------TTHIVVVSMVF--------IPSIYL 257
Cdd:cd00637   160 AYTIFLFVLLFLLPLLVIIVCYVRIFRKLRRHRRRIRSSSSNSSrrrrrrrerkvTKTLLIVVVVFllcwlpyfILLLLD 239
                         250       260       270
                  ....*....|....*....|....*....|....*.
gi 1191819213 258 YARPFTSFPMDKAVSISH--TVLTPMLNPLIYTLRN 291
Cdd:cd00637   240 VFGPDPSPLPRILYFLALllAYLNSAINPIIYAFFN 275
7tmA_amine_R-like cd14967
amine receptors and similar proteins, member of the class A family of seven-transmembrane G ...
38-297 3.50e-12

amine receptors and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; Amine receptors of the class A family of GPCRs include adrenoceptors, 5-HT (serotonin) receptors, muscarinic cholinergic receptors, dopamine receptors, histamine receptors, and trace amine receptors. The receptors of amine subfamily are major therapeutic targets for the treatment of neurological disorders and psychiatric diseases. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320098 [Multi-domain]  Cd Length: 259  Bit Score: 65.28  E-value: 3.50e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  38 AVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFFLSV 117
Cdd:cd14967    13 TVFGNLLVILAVYRNRRLRTVTNYFIVSLAVADLLVALLVMPFSAVYTLLGYWPFGPVLCRFWIALDVLCCTASILNLCA 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 118 MAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVhsISQLALMLPLPFCGPNVLDNFYCDVPQVLRLACtdTSVLEF 197
Cdd:cd14967    93 ISLDRYLAITRPLRYRQLMTKKRALIMIAAVWVYSLL--ISLPPLVGWRDETQPSVVDCECEFTPNKIYVLV--SSVISF 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 198 lmisnsgmlvLIWFLFLLISYSVILVMlgahsgqARRKAASTCTTHIVVVSMVF--IP-----SIYLYARPFTSFPMDKA 270
Cdd:cd14967   169 ----------FIPLLIMIVLYARIFRV-------ARRELKAAKTLAIIVGAFLLcwLPffiiyLVSAFCPPDCVPPILYA 231
                         250       260
                  ....*....|....*....|....*..
gi 1191819213 271 VSISHTVLTPMLNPLIYTLRNQEMQAA 297
Cdd:cd14967   232 VFFWLGYLNSALNPIIYALFNRDFRRA 258
7tmA_EDG-like cd14972
endothelial differentiation gene family, member of the class A family of seven-transmembrane G ...
38-298 3.32e-06

endothelial differentiation gene family, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents the endothelial differentiation gene (Edg) family of G-protein coupled receptors, melanocortin/ACTH receptors, and cannabinoid receptors as well as their closely related receptors. The Edg GPCRs bind blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). Melanocortin receptors bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. Two types of cannabinoid receptors, CB1 and CB2, are activated by naturally occurring endocannabinoids, cannabis plant-derived cannabinoids such as tetrahydrocannabinol, or synthetic cannabinoids. The CB receptors are involved in the various physiological processes such as appetite, mood, memory, and pain sensation. CB1 receptor is expressed predominantly in central and peripheral neurons, while CB2 receptor is found mainly in the immune system.


Pssm-ID: 341317 [Multi-domain]  Cd Length: 275  Bit Score: 47.67  E-value: 3.32e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  38 AVIGNLLITVTVTSDSRLHTPMYFlLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFFLSV 117
Cdd:cd14972    12 IVVENSLVLAAIIKNRRLHKPMYI-LIANLAAADLLAGIAFVFTFLSVLLVSLTPSPATWLLRKGSLVLSLLASAYSLLA 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 118 MAYDRLVAISRPLHYVIIMNTQLCVGLVVASWVGGFVhsisqLALmlpLPFCGPNVLDnfyCDVPQVLRLACTDT-SVLE 196
Cdd:cd14972    91 IAVDRYISIVHGLTYVNNVTNKRVKVLIALVWVWSVL-----LAL---LPVLGWNCVL---CDQESCSPLGPGLPkSYLV 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213 197 FLMISNSGMLVLIWFLFLLISYSVILVMLGAHSGQARRKAASTCTTH-----IVVVSMVFIPS-----IYLYARPFTSFP 266
Cdd:cd14972   160 LILVFFFIALVIIVFLYVRIFWCLWRHANAIAARQEAAVPAQPSTSRklaktVVIVLGVFLVCwlpllILLVLDVLCPSV 239
                         250       260       270
                  ....*....|....*....|....*....|....*.
gi 1191819213 267 MDKAVSISHT----VLTPMLNPLIYTLRNQEMQAAV 298
Cdd:cd14972   240 CDIQAVFYYFlvlaLLNSAINPIIYAFRLKEMRRAV 275
7tmA_Opsins_type2_animals cd14969
type 2 opsins in animals, member of the class A family of seven-transmembrane G ...
36-157 4.86e-03

type 2 opsins in animals, member of the class A family of seven-transmembrane G protein-coupled receptors; This rhodopsin family represents the type 2 opsins found in vertebrates and invertebrates except sponge. Type 2 opsins primarily function as G protein coupled receptors and are responsible for vision as well as for circadian rhythm and pigment regulation. On the contrary, type 1 opsins such as bacteriorhodopsin and proteorhodopsin are found in both prokaryotic and eukaryotic microbes, functioning as light-gated ion channels, proton pumps, sensory receptors and in other unknown functions. Although these two opsin types share seven-transmembrane domain topology and a conserved lysine reside in the seventh helix, type 1 opsins do not activate G-proteins and are not evolutionarily related to type 2. Type 2 opsins can be classified into six distinct subfamilies including the vertebrate opsins/encephalopsins, the G(o) opsins, the G(s) opsins, the invertebrate G(q) opsins, the photoisomerases, and the neuropsins.


Pssm-ID: 381741 [Multi-domain]  Cd Length: 284  Bit Score: 37.96  E-value: 4.86e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191819213  36 TTAVIGNLLITVTVTSDSRLHTPMYFLLRNLALLDLCFSSVTAPKMLVDLLSEKKTISYEGCMAQLFFFHFLGGAMVFFL 115
Cdd:cd14969    12 VLGVVLNGLVIIVFLKKKKLRTPLNLFLLNLALADLLMSVVGYPLSFYSNLSGRWSFGDPGCVIYGFAVTFLGLVSISTL 91
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 1191819213 116 SVMAYDRLVAISRPLHYVIIMNTQLCVgLVVASWVGGFVHSI 157
Cdd:cd14969    92 AALAFERYLVIVRPLKAFRLSKRRALI-LIAFIWLYGLFWAL 132
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH