NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|344273125|ref|XP_003408377|]
View 

dnaJ homolog subfamily C member 5B [Loxodonta africana]

Protein Classification

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
PRK10767 super family cl35946
chaperone protein DnaJ; Provisional
 21-84 4.57e-33

chaperone protein DnaJ; Provisional


The actual alignment was detected with superfamily member PRK10767:

Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 121.40  E-value: 4.57e-33
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 344273125  21 YEILGLQKGASNEEIKKTYRKLALKHHPDKNPDDPTAAEKFKEINNAHTILTDMSKRNIYDKYG 84
Cdd:PRK10767   7 YEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYG 70
 
Name Accession Description Interval E-value
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 21-84 4.57e-33

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 121.40  E-value: 4.57e-33
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 344273125  21 YEILGLQKGASNEEIKKTYRKLALKHHPDKNPDDPTAAEKFKEINNAHTILTDMSKRNIYDKYG 84
Cdd:PRK10767   7 YEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYG 70
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 20-81 5.44e-32

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 110.26  E-value: 5.44e-32
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 344273125   20 LYEILGLQKGASNEEIKKTYRKLALKHHPDKNPDDPTAAEKFKEINNAHTILTDMSKRNIYD 81
Cdd:pfam00226   2 YYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDPEAEEKFKEINEAYEVLSDPEKRAIYD 63
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 21-88 2.09e-30

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 113.85  E-value: 2.09e-30
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 344273125   21 YEILGLQKGASNEEIKKTYRKLALKHHPDKNPdDPTAAEKFKEINNAHTILTDMSKRNIYDKYGSLGL 88
Cdd:TIGR02349   3 YEILGVSKDASEEEIKKAYRKLAKKYHPDRNK-DKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGF 69
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 21-93 1.53e-29

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 106.33  E-value: 1.53e-29
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 344273125  21 YEILGLQKGASNEEIKKTYRKLALKHHPDKNPDDPTAAEKFKEINNAHTILTDMSKRNIYDKYGSLGLYVAEQ 93
Cdd:COG0484    3 YEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDPEAEEKFKEINEAYEVLSDPEKRAAYDRFGHAAELLLAT 75
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 21-73 2.56e-25

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 92.99  E-value: 2.56e-25
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 344273125  21 YEILGLQKGASNEEIKKTYRKLALKHHPDKNPDDPTAAEKFKEINNAHTILTD 73
Cdd:cd06257    3 YDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55
DnaJ smart00271
DnaJ molecular chaperone homology domain;
20-76 7.34e-23

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 86.52  E-value: 7.34e-23
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 344273125    20 LYEILGLQKGASNEEIKKTYRKLALKHHPDKNPDDPT-AAEKFKEINNAHTILTDMSK 76
Cdd:smart00271   3 YYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEeAEEKFKEINEAYEVLSDPEK 60
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
21-88 1.91e-20

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 87.95  E-value: 1.91e-20
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 344273125  21 YEILGLQKGASNEEIKKTYRKLALKHHPDKNpDDPTAAEKFKEINNAHTILTDMSKRNIYDKYGSLGL 88
Cdd:NF037946   8 YEVLGVDRDADDQEIKKAFRKLAKKYHPDRN-KAPDAAEIFAEINEAYEVLSNPEKRANYDKYGHDGV 74
 
Name Accession Description Interval E-value
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 21-84 4.57e-33

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 121.40  E-value: 4.57e-33
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 344273125  21 YEILGLQKGASNEEIKKTYRKLALKHHPDKNPDDPTAAEKFKEINNAHTILTDMSKRNIYDKYG 84
Cdd:PRK10767   7 YEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYG 70
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 20-81 5.44e-32

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 110.26  E-value: 5.44e-32
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 344273125   20 LYEILGLQKGASNEEIKKTYRKLALKHHPDKNPDDPTAAEKFKEINNAHTILTDMSKRNIYD 81
Cdd:pfam00226   2 YYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDPEAEEKFKEINEAYEVLSDPEKRAIYD 63
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 21-88 2.09e-30

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 113.85  E-value: 2.09e-30
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 344273125   21 YEILGLQKGASNEEIKKTYRKLALKHHPDKNPdDPTAAEKFKEINNAHTILTDMSKRNIYDKYGSLGL 88
Cdd:TIGR02349   3 YEILGVSKDASEEEIKKAYRKLAKKYHPDRNK-DKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGF 69
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 21-93 1.53e-29

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 106.33  E-value: 1.53e-29
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 344273125  21 YEILGLQKGASNEEIKKTYRKLALKHHPDKNPDDPTAAEKFKEINNAHTILTDMSKRNIYDKYGSLGLYVAEQ 93
Cdd:COG0484    3 YEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDPEAEEKFKEINEAYEVLSDPEKRAAYDRFGHAAELLLAT 75
PRK14297 PRK14297
molecular chaperone DnaJ;
21-85 9.03e-28

molecular chaperone DnaJ;


Pssm-ID: 184611 [Multi-domain]  Cd Length: 380  Bit Score: 107.56  E-value: 9.03e-28
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 344273125  21 YEILGLQKGASNEEIKKTYRKLALKHHPDKNPDDPTAAEKFKEINNAHTILTDMSKRNIYDKYGS 85
Cdd:PRK14297   7 YEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQYDQFGT 71
PRK14298 PRK14298
chaperone protein DnaJ; Provisional
 21-96 5.67e-27

chaperone protein DnaJ; Provisional


Pssm-ID: 184612 [Multi-domain]  Cd Length: 377  Bit Score: 105.32  E-value: 5.67e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344273125  21 YEILGLQKGASNEEIKKTYRKLALKHHPDKNpDDPTAAEKFKEINNAHTILTDMSKRNIYDKYGSLGL---YVAE----- 92
Cdd:PRK14298   8 YEILGLSKDASVEDIKKAYRKLAMKYHPDKN-KEPDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIdnqYSAEdifrg 86


                 ....*
gi 344273125  93 -QFGD 96
Cdd:PRK14298  87 aDFGG 91
PRK14294 PRK14294
chaperone protein DnaJ; Provisional
 21-88 7.49e-27

chaperone protein DnaJ; Provisional


Pssm-ID: 237664 [Multi-domain]  Cd Length: 366  Bit Score: 104.85  E-value: 7.49e-27
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 344273125  21 YEILGLQKGASNEEIKKTYRKLALKHHPDKNPDDPTAAEKFKEINNAHTILTDMSKRNIYDKYGSLGL 88
Cdd:PRK14294   7 YEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGL 74
SEC63 COG5407
Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular ...
 21-77 1.22e-26

Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 444165 [Multi-domain]  Cd Length: 61  Bit Score: 96.61  E-value: 1.22e-26
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 344273125  21 YEILGLQKGASNEEIKKTYRKLALKHHPDKNPDDPTAAEKFKEINNAHTILTDMSKR 77
Cdd:COG5407    3 YEVLGVAKTASADEIKKAYRKLAKKYHPDRNKGDPKAEERFKEINEAYELLSDAEKR 59
PRK14291 PRK14291
chaperone protein DnaJ; Provisional
 21-103 8.75e-26

chaperone protein DnaJ; Provisional


Pssm-ID: 237661 [Multi-domain]  Cd Length: 382  Bit Score: 102.16  E-value: 8.75e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344273125  21 YEILGLQKGASNEEIKKTYRKLALKHHPDKNPdDPTAAEKFKEINNAHTILTDMSKRNIYDKYGSLGLYVA-EQFGDENV 99
Cdd:PRK14291   6 YEILGVSRNATQEEIKKAYRRLARKYHPDFNK-NPEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSgQQQQGQEG 84


                 ....
gi 344273125 100 NTYF 103
Cdd:PRK14291  85 FSDF 88
PRK14277 PRK14277
chaperone protein DnaJ; Provisional
 20-84 1.62e-25

chaperone protein DnaJ; Provisional


Pssm-ID: 184599 [Multi-domain]  Cd Length: 386  Bit Score: 101.42  E-value: 1.62e-25
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 344273125  20 LYEILGLQKGASNEEIKKTYRKLALKHHPDKNPDDPTAAEKFKEINNAHTILTDMSKRNIYDKYG 84
Cdd:PRK14277   7 YYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFG 71
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 21-73 2.56e-25

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 92.99  E-value: 2.56e-25
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 344273125  21 YEILGLQKGASNEEIKKTYRKLALKHHPDKNPDDPTAAEKFKEINNAHTILTD 73
Cdd:cd06257    3 YDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55
PRK14284 PRK14284
chaperone protein DnaJ; Provisional
 21-89 4.49e-25

chaperone protein DnaJ; Provisional


Pssm-ID: 237658 [Multi-domain]  Cd Length: 391  Bit Score: 100.30  E-value: 4.49e-25
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 344273125  21 YEILGLQKGASNEEIKKTYRKLALKHHPDKNPDDPTAAEKFKEINNAHTILTDMSKRNIYDKYGSLGLY 89
Cdd:PRK14284   4 YTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPF 72
PRK14281 PRK14281
chaperone protein DnaJ; Provisional
 21-88 6.43e-25

chaperone protein DnaJ; Provisional


Pssm-ID: 237657 [Multi-domain]  Cd Length: 397  Bit Score: 99.88  E-value: 6.43e-25
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 344273125  21 YEILGLQKGASNEEIKKTYRKLALKHHPDKNPDDPTAAEKFKEINNAHTILTDMSKRNIYDKYGSLGL 88
Cdd:PRK14281   6 YEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGV 73
PRK14301 PRK14301
chaperone protein DnaJ; Provisional
 21-88 1.19e-23

chaperone protein DnaJ; Provisional


Pssm-ID: 237668 [Multi-domain]  Cd Length: 373  Bit Score: 96.35  E-value: 1.19e-23
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 344273125  21 YEILGLQKGASNEEIKKTYRKLALKHHPDKNPDDPTAAEKFKEINNAHTILTDMSKRNIYDKYGSLGL 88
Cdd:PRK14301   7 YEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGV 74
PTZ00037 PTZ00037
DnaJ_C chaperone protein; Provisional
 18-96 1.71e-23

DnaJ_C chaperone protein; Provisional


Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 96.43  E-value: 1.71e-23
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 344273125  18 EALYEILGLQKGASNEEIKKTYRKLALKHHPDKNPDdptaAEKFKEINNAHTILTDMSKRNIYDKYGSLGLYVAEQFGD 96
Cdd:PTZ00037  28 EKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD----PEKFKEISRAYEVLSDPEKRKIYDEYGEEGLEGGEQPAD 102
PRK14299 PRK14299
chaperone protein DnaJ; Provisional
 21-85 2.88e-23

chaperone protein DnaJ; Provisional


Pssm-ID: 237667 [Multi-domain]  Cd Length: 291  Bit Score: 93.85  E-value: 2.88e-23
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 344273125  21 YEILGLQKGASNEEIKKTYRKLALKHHPDKNpDDPTAAEKFKEINNAHTILTDMSKRNIYDKYGS 85
Cdd:PRK14299   7 YAILGVPKNASQDEIKKAFKKLARKYHPDVN-KSPGAEEKFKEINEAYTVLSDPEKRRIYDTYGT 70
DnaJ smart00271
DnaJ molecular chaperone homology domain;
20-76 7.34e-23

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 86.52  E-value: 7.34e-23
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 344273125    20 LYEILGLQKGASNEEIKKTYRKLALKHHPDKNPDDPT-AAEKFKEINNAHTILTDMSK 76
Cdd:smart00271   3 YYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEeAEEKFKEINEAYEVLSDPEK 60
PRK14286 PRK14286
chaperone protein DnaJ; Provisional
 16-88 1.28e-22

chaperone protein DnaJ; Provisional


Pssm-ID: 172774 [Multi-domain]  Cd Length: 372  Bit Score: 93.52  E-value: 1.28e-22
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 344273125  16 SGEALYEILGLQKGASNEEIKKTYRKLALKHHPDKNPDDPTAAEKFKEINNAHTILTDMSKRNIYDKYGSLGL 88
Cdd:PRK14286   2 SERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGV 74
PRK14289 PRK14289
molecular chaperone DnaJ;
21-95 1.45e-22

molecular chaperone DnaJ;


Pssm-ID: 237660 [Multi-domain]  Cd Length: 386  Bit Score: 93.36  E-value: 1.45e-22
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 344273125  21 YEILGLQKGASNEEIKKTYRKLALKHHPDKNPDDPTAAEKFKEINNAHTILTDMSKRNIYDKYGSLGLYVAEQFG 95
Cdd:PRK14289   8 YEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGVGGAAGGG 82
PRK14283 PRK14283
chaperone protein DnaJ; Provisional
 21-100 2.07e-22

chaperone protein DnaJ; Provisional


Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 92.97  E-value: 2.07e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344273125  21 YEILGLQKGASNEEIKKTYRKLALKHHPDKNpDDPTAAEKFKEINNAHTILTDMSKRNIYDKYGSLGL--YVAEQFGdEN 98
Cdd:PRK14283   8 YEVLGVDRNADKKEIKKAYRKLARKYHPDVS-EEEGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGMdgFSQEDIF-NN 85


                 ..
gi 344273125  99 VN 100
Cdd:PRK14283  86 IN 87
PRK14292 PRK14292
chaperone protein DnaJ; Provisional
 21-85 2.11e-22

chaperone protein DnaJ; Provisional


Pssm-ID: 237662 [Multi-domain]  Cd Length: 371  Bit Score: 92.64  E-value: 2.11e-22
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 344273125  21 YEILGLQKGASNEEIKKTYRKLALKHHPDKNPdDPTAAEKFKEINNAHTILTDMSKRNIYDKYGS 85
Cdd:PRK14292   5 YELLGVSRTASADEIKSAYRKLALKYHPDRNK-EKGAAEKFAQINEAYAVLSDAEKRAHYDRFGT 68
PRK14278 PRK14278
chaperone protein DnaJ; Provisional
 21-81 3.39e-22

chaperone protein DnaJ; Provisional


Pssm-ID: 237654 [Multi-domain]  Cd Length: 378  Bit Score: 92.42  E-value: 3.39e-22
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 344273125  21 YEILGLQKGASNEEIKKTYRKLALKHHPDKNPdDPTAAEKFKEINNAHTILTDMSKRNIYD 81
Cdd:PRK14278   6 YGLLGVSRNASDAEIKRAYRKLARELHPDVNP-DEEAQEKFKEISVAYEVLSDPEKRRIVD 65
PRK14276 PRK14276
chaperone protein DnaJ; Provisional
 18-87 6.81e-22

chaperone protein DnaJ; Provisional


Pssm-ID: 237653 [Multi-domain]  Cd Length: 380  Bit Score: 91.30  E-value: 6.81e-22
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344273125  18 EALYEILGLQKGASNEEIKKTYRKLALKHHPDKNpDDPTAAEKFKEINNAHTILTDMSKRNIYDKYGSLG 87
Cdd:PRK14276   4 TEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDIN-KEPGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAG 72
PRK14280 PRK14280
molecular chaperone DnaJ;
21-87 1.47e-21

molecular chaperone DnaJ;


Pssm-ID: 237656 [Multi-domain]  Cd Length: 376  Bit Score: 90.55  E-value: 1.47e-21
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 344273125  21 YEILGLQKGASNEEIKKTYRKLALKHHPDKNpDDPTAAEKFKEINNAHTILTDMSKRNIYDKYGSLG 87
Cdd:PRK14280   7 YEVLGVSKSASKDEIKKAYRKLSKKYHPDIN-KEEGADEKFKEISEAYEVLSDDQKRAQYDQFGHAG 72
PRK14293 PRK14293
molecular chaperone DnaJ;
21-96 1.41e-20

molecular chaperone DnaJ;


Pssm-ID: 237663 [Multi-domain]  Cd Length: 374  Bit Score: 87.74  E-value: 1.41e-20
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 344273125  21 YEILGLQKGASNEEIKKTYRKLALKHHPDKNpDDPTAAEKFKEINNAHTILTDMSKRNIYDKYGSLGLYVAEQFGD 96
Cdd:PRK14293   6 YEILGVSRDADKDELKRAYRRLARKYHPDVN-KEPGAEDRFKEINRAYEVLSDPETRARYDQFGEAGVSGAAGFPD 80
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
21-88 1.91e-20

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 87.95  E-value: 1.91e-20
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 344273125  21 YEILGLQKGASNEEIKKTYRKLALKHHPDKNpDDPTAAEKFKEINNAHTILTDMSKRNIYDKYGSLGL 88
Cdd:NF037946   8 YEVLGVDRDADDQEIKKAFRKLAKKYHPDRN-KAPDAAEIFAEINEAYEVLSNPEKRANYDKYGHDGV 74
PRK14295 PRK14295
molecular chaperone DnaJ;
21-86 2.33e-20

molecular chaperone DnaJ;


Pssm-ID: 237665 [Multi-domain]  Cd Length: 389  Bit Score: 87.21  E-value: 2.33e-20
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 344273125  21 YEILGLQKGASNEEIKKTYRKLALKHHPDKNPDDPTAAEKFKEINNAHTILTDMSKRNIYDKYGSL 86
Cdd:PRK14295  12 YKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKEYDEARSL 77
PRK14279 PRK14279
molecular chaperone DnaJ;
21-86 2.97e-20

molecular chaperone DnaJ;


Pssm-ID: 237655 [Multi-domain]  Cd Length: 392  Bit Score: 87.10  E-value: 2.97e-20
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 344273125  21 YEILGLQKGASNEEIKKTYRKLALKHHPDKNPDDPTAAEKFKEINNAHTILTDMSKRNIYDKYGSL 86
Cdd:PRK14279  12 YKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYDETRRL 77
PRK14285 PRK14285
chaperone protein DnaJ; Provisional
 21-84 4.32e-20

chaperone protein DnaJ; Provisional


Pssm-ID: 172773 [Multi-domain]  Cd Length: 365  Bit Score: 86.20  E-value: 4.32e-20
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 344273125  21 YEILGLQKGASNEEIKKTYRKLALKHHPDKNPDDPTAAEKFKEINNAHTILTDMSKRNIYDKYG 84
Cdd:PRK14285   6 YEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQYDRFG 69
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
 21-93 9.92e-20

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 85.23  E-value: 9.92e-20
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 344273125  21 YEILGLQKGASNEEIKKTYRKLALKHHPDKNPDDPTAAE-KFKEINNAHTILTDMSKRNIYDKYGslglYVAEQ 93
Cdd:PRK14282   7 YEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEqKFKEIQEAYEVLSDPQKRAMYDRFG----YVGEQ 76
CbpA COG2214
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
21-81 2.20e-18

Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];


Pssm-ID: 441816 [Multi-domain]  Cd Length: 91  Bit Score: 75.91  E-value: 2.20e-18
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 344273125  21 YEILGLQKGASNEEIKKTYRKLALKHHPDKNPDDPT-AAEKFKEINNAHTILTDMSKRNIYD 81
Cdd:COG2214    8 YAVLGVPPDASLEEIRQAYRRLAKLLHPDRGGELKAlAEELFQRLNEAYEVLSDPERRAEYD 69
PRK14288 PRK14288
molecular chaperone DnaJ;
21-103 2.53e-18

molecular chaperone DnaJ;


Pssm-ID: 172776 [Multi-domain]  Cd Length: 369  Bit Score: 81.66  E-value: 2.53e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344273125  21 YEILGLQKGASNEEIKKTYRKLALKHHPDKNPDDPTAAEKFKEINNAHTILTDMSKRNIYDKYGSLGLYVA----EQFGD 96
Cdd:PRK14288   6 YEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQAgasqSDFSD 85


                 ....*....
gi 344273125  97 --ENVNTYF 103
Cdd:PRK14288  86 ffEDLGSFF 94
PRK14290 PRK14290
chaperone protein DnaJ; Provisional
 21-85 8.11e-18

chaperone protein DnaJ; Provisional


Pssm-ID: 172778 [Multi-domain]  Cd Length: 365  Bit Score: 79.98  E-value: 8.11e-18
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 344273125  21 YEILGLQKGASNEEIKKTYRKLALKHHPDKNPDDPT-AAEKFKEINNAHTILTDMSKRNIYDKYGS 85
Cdd:PRK14290   6 YKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAeAEEKFKEISEAYEVLSDPQKRRQYDQTGT 71
PRK14296 PRK14296
chaperone protein DnaJ; Provisional
 21-84 3.42e-16

chaperone protein DnaJ; Provisional


Pssm-ID: 237666 [Multi-domain]  Cd Length: 372  Bit Score: 75.37  E-value: 3.42e-16
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 344273125  21 YEILGLQKGASNEEIKKTYRKLALKHHPDKNpDDPTAAEKFKEINNAHTILTDMSKRNIYDKYG 84
Cdd:PRK14296   7 YEVLGVSKTASEQEIRQAYRKLAKQYHPDLN-KSPDAHDKMVEINEAADVLLDKDKRKQYDQFG 69
PRK14287 PRK14287
chaperone protein DnaJ; Provisional
 21-84 9.11e-16

chaperone protein DnaJ; Provisional


Pssm-ID: 237659 [Multi-domain]  Cd Length: 371  Bit Score: 74.28  E-value: 9.11e-16
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 344273125  21 YEILGLQKGASNEEIKKTYRKLALKHHPDKNpDDPTAAEKFKEINNAHTILTDMSKRNIYDKYG 84
Cdd:PRK14287   7 YEVLGVDRNASVDEVKKAYRKLARKYHPDVN-KAPDAEDKFKEVKEAYDTLSDPQKKAHYDQFG 69
PRK14300 PRK14300
chaperone protein DnaJ; Provisional
 21-84 5.59e-15

chaperone protein DnaJ; Provisional


Pssm-ID: 172788 [Multi-domain]  Cd Length: 372  Bit Score: 71.97  E-value: 5.59e-15
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 344273125  21 YEILGLQKGASNEEIKKTYRKLALKHHPDkNPDDPTAAEKFKEINNAHTILTDMSKRNIYDKYG 84
Cdd:PRK14300   6 YQILGVSKTASQADLKKAYLKLAKQYHPD-TTDAKDAEKKFKEINAAYDVLKDEQKRAAYDRFG 68
PTZ00341 PTZ00341
Ring-infected erythrocyte surface antigen; Provisional
 7-107 1.77e-11

Ring-infected erythrocyte surface antigen; Provisional


Pssm-ID: 173534 [Multi-domain]  Cd Length: 1136  Bit Score: 62.50  E-value: 1.77e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344273125    7 SSRQRTLSTSGEALYEILGLQKGASNEEIKKTYRKLALKHHPDKNPDDpTAAEKFKEINNAHTILTDMSKRNIYDKYGSL 86
Cdd:PTZ00341  562 SEAAPTIEIPDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGN-EGFHKFKKINEAYQILGDIDKKKMYNKFGYD 640

                          90       100
                  ....*....|....*....|.
gi 344273125   87 GLyvaEQFGDENVNTYFMLSS 107
Cdd:PTZ00341  641 GI---KGVNFIHPSIFYLLAS 658
PRK10266 PRK10266
curved DNA-binding protein;
21-82 1.64e-10

curved DNA-binding protein;


Pssm-ID: 182347 [Multi-domain]  Cd Length: 306  Bit Score: 59.06  E-value: 1.64e-10
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 344273125  21 YEILGLQKGASNEEIKKTYRKLALKHHPD--KNPDdptAAEKFKEINNAHTILTDMSKRNIYDK 82
Cdd:PRK10266   7 YAIMGVKPTDDLKTIKTAYRRLARKYHPDvsKEPD---AEARFKEVAEAWEVLSDEQRRAEYDQ 67
DjlA COG1076
DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];
21-73 2.65e-10

DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440694 [Multi-domain]  Cd Length: 75  Bit Score: 54.42  E-value: 2.65e-10
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 344273125  21 YEILGLQKGASNEEIKKTYRKLALKHHPDK-----NPDDPTAA-EKFKEINNAHTILTD 73
Cdd:COG1076    7 FELLGLPPDADDAELKRAYRKLQREHHPDRlaaglPEEEQRLAlQKAAAINEAYETLKD 65
djlA PRK09430
co-chaperone DjlA;
7-50 8.03e-08

co-chaperone DjlA;


Pssm-ID: 236512 [Multi-domain]  Cd Length: 267  Bit Score: 50.97  E-value: 8.03e-08
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....
gi 344273125   7 SSRQRTLSTSgealYEILGLQKGASNEEIKKTYRKLALKHHPDK 50
Cdd:PRK09430 193 AQRGPTLEDA----YKVLGVSESDDDQEIKRAYRKLMSEHHPDK 232
ZUO1 COG5269
Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / ...
 20-81 3.21e-05

Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227594 [Multi-domain]  Cd Length: 379  Bit Score: 43.48  E-value: 3.21e-05
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 344273125  20 LYEILGLQK---GASNEEIKKTYRKLALKHHPDKNPDDPTAA--EKFKEINNAHTILTDMSKRNIYD 81
Cdd:COG5269   45 LYALLGLSKyrtKAIPPQILKAHKKKVYKYHPDKTAAGGNKGcdEFFKLIQKAREVLGDRKLRLQYD 111
PHA03102 PHA03102
Small T antigen; Reviewed
 18-65 2.40e-04

Small T antigen; Reviewed


Pssm-ID: 222986 [Multi-domain]  Cd Length: 153  Bit Score: 39.65  E-value: 2.40e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|
gi 344273125  18 EALYEILGLQKGA--SNEEIKKTYRKLALKHHPDKNPDDptaaEKFKEIN 65
Cdd:PHA03102   5 KELMDLLGLPRSAwgNLPLMRKAYLRKCLEFHPDKGGDE----EKMKELN 50
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH