transmembrane gamma-carboxyglutamic acid protein 2 [Pongo abelii]
Protein Classification
GLA and TM_EGFR-like domain-containing protein( domain architecture ID 10637896)
GLA and TM_EGFR-like domain-containing protein
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| GLA | smart00069 | Domain containing Gla (gamma-carboxyglutamate) residues; A hyaluronan-binding domain found in ... |
28-95 | 1.03e-26 | ||
Domain containing Gla (gamma-carboxyglutamate) residues; A hyaluronan-binding domain found in proteins associated with the extracellular matrix, cell adhesion and cell migration. : Pssm-ID: 214503 Cd Length: 65 Bit Score: 97.00 E-value: 1.03e-26
|
||||||
| TM_EGFR-like | cd12087 | Transmembrane domain of the Epidermal Growth Factor Receptor family of Protein Tyrosine ... |
107-138 | 7.13e-03 | ||
Transmembrane domain of the Epidermal Growth Factor Receptor family of Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. They are receptor PTKs (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane (TM) helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. They are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. The TM domain not only serves as a membrane anchor, but also plays an important role in receptor dimerization and optimal activation. Mutations in the TM domain of EGFR family RTKs have been associated with increased breast cancer risk. : Pssm-ID: 213052 Cd Length: 38 Bit Score: 33.27 E-value: 7.13e-03
|
||||||
| Name | Accession | Description | Interval | E-value | ||
| GLA | smart00069 | Domain containing Gla (gamma-carboxyglutamate) residues; A hyaluronan-binding domain found in ... |
28-95 | 1.03e-26 | ||
Domain containing Gla (gamma-carboxyglutamate) residues; A hyaluronan-binding domain found in proteins associated with the extracellular matrix, cell adhesion and cell migration. Pssm-ID: 214503 Cd Length: 65 Bit Score: 97.00 E-value: 1.03e-26
|
||||||
| Gla | pfam00594 | Vitamin K-dependent carboxylation/gamma-carboxyglutamic (GLA) domain; This domain is ... |
55-95 | 6.60e-22 | ||
Vitamin K-dependent carboxylation/gamma-carboxyglutamic (GLA) domain; This domain is responsible for the high-affinity binding of calcium ions. This domain contains post-translational modifications of many glutamate residues by Vitamin K-dependent carboxylation to form gamma-carboxyglutamate (Gla). Pssm-ID: 459861 Cd Length: 41 Bit Score: 83.73 E-value: 6.60e-22
|
||||||
| TM_EGFR-like | cd12087 | Transmembrane domain of the Epidermal Growth Factor Receptor family of Protein Tyrosine ... |
107-138 | 7.13e-03 | ||
Transmembrane domain of the Epidermal Growth Factor Receptor family of Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. They are receptor PTKs (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane (TM) helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. They are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. The TM domain not only serves as a membrane anchor, but also plays an important role in receptor dimerization and optimal activation. Mutations in the TM domain of EGFR family RTKs have been associated with increased breast cancer risk. Pssm-ID: 213052 Cd Length: 38 Bit Score: 33.27 E-value: 7.13e-03
|
||||||
| Name | Accession | Description | Interval | E-value | ||
| GLA | smart00069 | Domain containing Gla (gamma-carboxyglutamate) residues; A hyaluronan-binding domain found in ... |
28-95 | 1.03e-26 | ||
Domain containing Gla (gamma-carboxyglutamate) residues; A hyaluronan-binding domain found in proteins associated with the extracellular matrix, cell adhesion and cell migration. Pssm-ID: 214503 Cd Length: 65 Bit Score: 97.00 E-value: 1.03e-26
|
||||||
| Gla | pfam00594 | Vitamin K-dependent carboxylation/gamma-carboxyglutamic (GLA) domain; This domain is ... |
55-95 | 6.60e-22 | ||
Vitamin K-dependent carboxylation/gamma-carboxyglutamic (GLA) domain; This domain is responsible for the high-affinity binding of calcium ions. This domain contains post-translational modifications of many glutamate residues by Vitamin K-dependent carboxylation to form gamma-carboxyglutamate (Gla). Pssm-ID: 459861 Cd Length: 41 Bit Score: 83.73 E-value: 6.60e-22
|
||||||
| TM_EGFR-like | cd12087 | Transmembrane domain of the Epidermal Growth Factor Receptor family of Protein Tyrosine ... |
107-138 | 7.13e-03 | ||
Transmembrane domain of the Epidermal Growth Factor Receptor family of Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. They are receptor PTKs (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane (TM) helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. They are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. The TM domain not only serves as a membrane anchor, but also plays an important role in receptor dimerization and optimal activation. Mutations in the TM domain of EGFR family RTKs have been associated with increased breast cancer risk. Pssm-ID: 213052 Cd Length: 38 Bit Score: 33.27 E-value: 7.13e-03
|
||||||
| Blast search parameters | ||||
|
