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Conserved domains on  [gi|258577601|ref|XP_002542982|]
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uncharacterized protein UREG_02498 [Uncinocarpus reesii 1704]

Protein Classification

aminoglycoside phosphotransferase family protein( domain architecture ID 10007009)

aminoglycoside phosphotransferase family protein catalyzes the phosphorylation of small molecule substrates such as aminoglycoside antibiotics and N-acetylhexosamine

CATH:  1.10.510.10
Gene Ontology:  GO:0005524|GO:0016310|GO:0016301
PubMed:  16244704

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PKc_like super family cl21453
Protein Kinases, catalytic domain; The protein kinase superfamily is mainly composed of the ...
60-167 1.15e-14

Protein Kinases, catalytic domain; The protein kinase superfamily is mainly composed of the catalytic domains of serine/threonine-specific and tyrosine-specific protein kinases. It also includes RIO kinases, which are atypical serine protein kinases, aminoglycoside phosphotransferases, and choline kinases. These proteins catalyze the transfer of the gamma-phosphoryl group from ATP to hydroxyl groups in specific substrates such as serine, threonine, or tyrosine residues of proteins.


The actual alignment was detected with superfamily member cd05120:

Pssm-ID: 473864 [Multi-domain]  Cd Length: 158  Bit Score: 71.57  E-value: 1.15e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258577601  60 VRIEKISEGQYNKVFSLtmNDGREAIAKLPNPnagRPHFTTACEVATMDFLRNVLHLPVPKVYA-WHSRaaenptGAEYI 138
Cdd:cd05120    1 ISVKLIKEGGDNKVYLL--GDPREYVLKIGPP---RLKKDLEKEAAMLQLLAGKLSLPVPKVYGfGESD------GWEYL 69
                         90       100
                 ....*....|....*....|....*....
gi 258577601 139 IMEKQAGVILSDVWDDMSGNGKAHIIKQV 167
Cdd:cd05120   70 LMERIEGETLSEVWPRLSEEEKEKIADQL 98
YcbJ COG3173
Predicted kinase, aminoglycoside phosphotransferase (APT) family [General function prediction ...
55-335 9.10e-10

Predicted kinase, aminoglycoside phosphotransferase (APT) family [General function prediction only];


:

Pssm-ID: 442406 [Multi-domain]  Cd Length: 284  Bit Score: 59.74  E-value: 9.10e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258577601  55 GSKSCVRIEKISEGQYNKVFSLTmnDGREAIAKLPNPNAGRPHfTTACEVATMDFLRNVLHLPVPKVYAWHSRAAenPTG 134
Cdd:COG3173   18 GLAGLPEVEPLSGGWSNLTYRLD--TGDRLVLRRPPRGLASAH-DVRREARVLRALAPRLGVPVPRPLALGEDGE--VIG 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258577601 135 AEYIIMEKQAGVILSDVWDDMSGNGKAHIIKQVVgieQTLAStkfkrfgalyykqdlpsdndtllfvggtgenIHSekfV 214
Cdd:COG3173   93 APFYVMEWVEGETLEDALPDLSPAERRALARALG---EFLAA-------------------------------LHA---V 135
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258577601 215 IGPTNHRSFFDFGKGELDIDRgpWSTlpEYLVAIAHREiacvkaslRYPIMPEGLfygprqyqpspskkLSALRNYLkvc 294
Cdd:COG3173  136 DPAAAGLADGRPEGLERQLAR--WRA--QLRRALARTD--------DLPALRERL--------------AAWLAANL--- 186
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|.
gi 258577601 295 phvlpedPVTHESVLWHGDLHLQNVFVNPEDPaQILGIIDW 335
Cdd:COG3173  187 -------PEWGPPVLVHGDLRPGNLLVDPDDG-RLTAVIDW 219
 
Name Accession Description Interval E-value
APH_ChoK_like cd05120
Aminoglycoside 3'-phosphotransferase and Choline Kinase family; This family is composed of APH, ...
60-167 1.15e-14

Aminoglycoside 3'-phosphotransferase and Choline Kinase family; This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).


Pssm-ID: 270690 [Multi-domain]  Cd Length: 158  Bit Score: 71.57  E-value: 1.15e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258577601  60 VRIEKISEGQYNKVFSLtmNDGREAIAKLPNPnagRPHFTTACEVATMDFLRNVLHLPVPKVYA-WHSRaaenptGAEYI 138
Cdd:cd05120    1 ISVKLIKEGGDNKVYLL--GDPREYVLKIGPP---RLKKDLEKEAAMLQLLAGKLSLPVPKVYGfGESD------GWEYL 69
                         90       100
                 ....*....|....*....|....*....
gi 258577601 139 IMEKQAGVILSDVWDDMSGNGKAHIIKQV 167
Cdd:cd05120   70 LMERIEGETLSEVWPRLSEEEKEKIADQL 98
YcbJ COG3173
Predicted kinase, aminoglycoside phosphotransferase (APT) family [General function prediction ...
55-335 9.10e-10

Predicted kinase, aminoglycoside phosphotransferase (APT) family [General function prediction only];


Pssm-ID: 442406 [Multi-domain]  Cd Length: 284  Bit Score: 59.74  E-value: 9.10e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258577601  55 GSKSCVRIEKISEGQYNKVFSLTmnDGREAIAKLPNPNAGRPHfTTACEVATMDFLRNVLHLPVPKVYAWHSRAAenPTG 134
Cdd:COG3173   18 GLAGLPEVEPLSGGWSNLTYRLD--TGDRLVLRRPPRGLASAH-DVRREARVLRALAPRLGVPVPRPLALGEDGE--VIG 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258577601 135 AEYIIMEKQAGVILSDVWDDMSGNGKAHIIKQVVgieQTLAStkfkrfgalyykqdlpsdndtllfvggtgenIHSekfV 214
Cdd:COG3173   93 APFYVMEWVEGETLEDALPDLSPAERRALARALG---EFLAA-------------------------------LHA---V 135
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258577601 215 IGPTNHRSFFDFGKGELDIDRgpWSTlpEYLVAIAHREiacvkaslRYPIMPEGLfygprqyqpspskkLSALRNYLkvc 294
Cdd:COG3173  136 DPAAAGLADGRPEGLERQLAR--WRA--QLRRALARTD--------DLPALRERL--------------AAWLAANL--- 186
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|.
gi 258577601 295 phvlpedPVTHESVLWHGDLHLQNVFVNPEDPaQILGIIDW 335
Cdd:COG3173  187 -------PEWGPPVLVHGDLRPGNLLVDPDDG-RLTAVIDW 219
APH pfam01636
Phosphotransferase enzyme family; This family consists of bacterial antibiotic resistance ...
62-336 1.31e-07

Phosphotransferase enzyme family; This family consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include: aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation. This family also includes homoserine kinase. This family is related to fructosamine kinase pfam03881.


Pssm-ID: 426359 [Multi-domain]  Cd Length: 239  Bit Score: 52.89  E-value: 1.31e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258577601   62 IEKISEGQYNKVFSLTmNDGREAIAKLPNPnaGRPHFTTACEVATMDFLRNVLHLPVPKVYAWHSRAAENptGAEYIIME 141
Cdd:pfam01636   2 LRPISSGASNRTYLVT-TGDGRYVLRLPPP--GRAAEELRRELALLRHLAAAGVPPVPRVLAGCTDAELL--GLPFLLME 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258577601  142 KQAGVILSDVWDDMSGngkahiikqvvgieqtlastkfkrfGALYYKqdlpsdndtllfVGGTGENIHSekfviGPTNHR 221
Cdd:pfam01636  77 YLPGEVLARPLLPEER-------------------------GALLEA------------LGRALARLHA-----VDPAAL 114
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258577601  222 SFFDFGKGELDIDRgpwstlpeYLVAIAHREIACvkaslrypimpeglfygprQYQPSPSKKLSALRNYLkvcphvLPED 301
Cdd:pfam01636 115 PLAGRLARLLELLR--------QLEAALARLLAA-------------------ELLDRLEELEERLLAAL------LALL 161
                         250       260       270
                  ....*....|....*....|....*....|....*
gi 258577601  302 PVTHESVLWHGDLHLQNVFVNPEDPaqILGIIDWQ 336
Cdd:pfam01636 162 PAELPPVLVHGDLHPGNLLVDPGGR--VSGVIDFE 194
 
Name Accession Description Interval E-value
APH_ChoK_like cd05120
Aminoglycoside 3'-phosphotransferase and Choline Kinase family; This family is composed of APH, ...
60-167 1.15e-14

Aminoglycoside 3'-phosphotransferase and Choline Kinase family; This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).


Pssm-ID: 270690 [Multi-domain]  Cd Length: 158  Bit Score: 71.57  E-value: 1.15e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258577601  60 VRIEKISEGQYNKVFSLtmNDGREAIAKLPNPnagRPHFTTACEVATMDFLRNVLHLPVPKVYA-WHSRaaenptGAEYI 138
Cdd:cd05120    1 ISVKLIKEGGDNKVYLL--GDPREYVLKIGPP---RLKKDLEKEAAMLQLLAGKLSLPVPKVYGfGESD------GWEYL 69
                         90       100
                 ....*....|....*....|....*....
gi 258577601 139 IMEKQAGVILSDVWDDMSGNGKAHIIKQV 167
Cdd:cd05120   70 LMERIEGETLSEVWPRLSEEEKEKIADQL 98
YcbJ COG3173
Predicted kinase, aminoglycoside phosphotransferase (APT) family [General function prediction ...
55-335 9.10e-10

Predicted kinase, aminoglycoside phosphotransferase (APT) family [General function prediction only];


Pssm-ID: 442406 [Multi-domain]  Cd Length: 284  Bit Score: 59.74  E-value: 9.10e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258577601  55 GSKSCVRIEKISEGQYNKVFSLTmnDGREAIAKLPNPNAGRPHfTTACEVATMDFLRNVLHLPVPKVYAWHSRAAenPTG 134
Cdd:COG3173   18 GLAGLPEVEPLSGGWSNLTYRLD--TGDRLVLRRPPRGLASAH-DVRREARVLRALAPRLGVPVPRPLALGEDGE--VIG 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258577601 135 AEYIIMEKQAGVILSDVWDDMSGNGKAHIIKQVVgieQTLAStkfkrfgalyykqdlpsdndtllfvggtgenIHSekfV 214
Cdd:COG3173   93 APFYVMEWVEGETLEDALPDLSPAERRALARALG---EFLAA-------------------------------LHA---V 135
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258577601 215 IGPTNHRSFFDFGKGELDIDRgpWSTlpEYLVAIAHREiacvkaslRYPIMPEGLfygprqyqpspskkLSALRNYLkvc 294
Cdd:COG3173  136 DPAAAGLADGRPEGLERQLAR--WRA--QLRRALARTD--------DLPALRERL--------------AAWLAANL--- 186
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|.
gi 258577601 295 phvlpedPVTHESVLWHGDLHLQNVFVNPEDPaQILGIIDW 335
Cdd:COG3173  187 -------PEWGPPVLVHGDLRPGNLLVDPDDG-RLTAVIDW 219
APH pfam01636
Phosphotransferase enzyme family; This family consists of bacterial antibiotic resistance ...
62-336 1.31e-07

Phosphotransferase enzyme family; This family consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include: aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation. This family also includes homoserine kinase. This family is related to fructosamine kinase pfam03881.


Pssm-ID: 426359 [Multi-domain]  Cd Length: 239  Bit Score: 52.89  E-value: 1.31e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258577601   62 IEKISEGQYNKVFSLTmNDGREAIAKLPNPnaGRPHFTTACEVATMDFLRNVLHLPVPKVYAWHSRAAENptGAEYIIME 141
Cdd:pfam01636   2 LRPISSGASNRTYLVT-TGDGRYVLRLPPP--GRAAEELRRELALLRHLAAAGVPPVPRVLAGCTDAELL--GLPFLLME 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258577601  142 KQAGVILSDVWDDMSGngkahiikqvvgieqtlastkfkrfGALYYKqdlpsdndtllfVGGTGENIHSekfviGPTNHR 221
Cdd:pfam01636  77 YLPGEVLARPLLPEER-------------------------GALLEA------------LGRALARLHA-----VDPAAL 114
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258577601  222 SFFDFGKGELDIDRgpwstlpeYLVAIAHREIACvkaslrypimpeglfygprQYQPSPSKKLSALRNYLkvcphvLPED 301
Cdd:pfam01636 115 PLAGRLARLLELLR--------QLEAALARLLAA-------------------ELLDRLEELEERLLAAL------LALL 161
                         250       260       270
                  ....*....|....*....|....*....|....*
gi 258577601  302 PVTHESVLWHGDLHLQNVFVNPEDPaqILGIIDWQ 336
Cdd:pfam01636 162 PAELPPVLVHGDLHPGNLLVDPGGR--VSGVIDFE 194
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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