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Conserved domains on  [gi|171687239|ref|XP_001908560|]
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uncharacterized protein PODANS_1_9010, partial [Podospora anserina S mat+]

Protein Classification

tetratricopeptide repeat protein( domain architecture ID 11434433)

tetratricopeptide repeat (TPR) protein may adopt a right-handed helical structure with an amphipathic channel and may function as an interaction scaffold in the formation of multi-protein complexes

CATH:  1.25.40.10
Gene Ontology:  GO:0005515
PubMed:  10517866|30708253
SCOP:  3001345

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
TPR COG0790
TPR repeat [General function prediction only];
277-528 2.27e-28

TPR repeat [General function prediction only];


:

Pssm-ID: 440553 [Multi-domain]  Cd Length: 241  Bit Score: 114.26  E-value: 2.27e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 171687239 277 RWVDEAHRIADELGGVYGEGASAYSAGRESVQKSPDSYASIEDIIEYLNLMSEKGDFKASFNLGRIYYEGQrGHEINLAE 356
Cdd:COG0790    7 AAAAAAAAAAALAAAAAAAGAAAAAAAAAAAAAALAAAAGAAAAAAAAAAAAAAGGAEAQYNLGLMYAEGR-GVPKDYEK 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 171687239 357 AKRYFYEVAQQywvkGQqvqnpkpgldkyaAKAAGYIGRMYMRGEGVDQNFIRAKYWFERGSYLKDSQSQYSLGLLYLNG 436
Cdd:COG0790   86 ALEWFEKAAEQ----GD-------------AEAQYNLGLMYEEGLGVPQDYAKALEWYEKAAEQGDADAQYNLGLLYLNG 148

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 171687239 437 YGVPVDVPKATEYFKAAAMQDYPYAEVALGALHLD-QGGTDDLAAANHYFELAARWASIESYYYLGELNLLGVGREKSCS 515
Cdd:COG0790  149 EGVPKDPAKAAEWYRKAAEQGDADAQYNLGVLYENgRGVPKDPAKALEWYRKAAEQGDADAQYNLGRLYLNGEGVEKDLE 228

                        250
                 ....*....|...
gi 171687239 516 AALGYFKSVSERA 528
Cdd:COG0790  229 KALRWLRKAAEQA 241
TPR COG0790
TPR repeat [General function prediction only];
141-416 1.65e-19

TPR repeat [General function prediction only];


:

Pssm-ID: 440553 [Multi-domain]  Cd Length: 241  Bit Score: 88.83  E-value: 1.65e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 171687239 141 ASKLLNEAARQNNSDALYILAEMNFYGNfSHPRNFKEAFDNYHKLAlLNGNNSALYMMGLMYSTGIGgaVEADQARALLY 220
Cdd:COG0790   50 AAAAAAAAAAAGGAEAQYNLGLMYAEGR-GVPKDYEKALEWFEKAA-EQGDAEAQYNLGLMYEEGLG--VPQDYAKALEW 125

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 171687239 221 YTFAANRGHTRAQMSLAYRHHAGIGTPKNCDVAVKYYKQVAdkviawyrsgppggmrwvdeahriadelggvygegasay 300
Cdd:COG0790  126 YEKAAEQGDADAQYNLGLLYLNGEGVPKDPAKAAEWYRKAA--------------------------------------- 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 171687239 301 sagresvqkspdsyasiediieylnlmsEKGDFKASFNLGRIYYEGqRGHEINLAEAKRYFYEVAQQywvkGQqvqnpkp 380
Cdd:COG0790  167 ----------------------------EQGDADAQYNLGVLYENG-RGVPKDPAKALEWYRKAAEQ----GD------- 206

                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 171687239 381 gldkyaAKAAGYIGRMYMRGEGVDQNFIRAKYWFER 416
Cdd:COG0790  207 ------ADAQYNLGRLYLNGEGVEKDLEKALRWLRK 236
TPR COG0790
TPR repeat [General function prediction only];
546-684 9.77e-18

TPR repeat [General function prediction only];


:

Pssm-ID: 440553 [Multi-domain]  Cd Length: 241  Bit Score: 83.44  E-value: 9.77e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 171687239 546 DEELALLEYLGAAEQGYEKAQNNVAFMLdpeqslleipqwLYRRAVKspllRNPRLALTYWTRSARQGNIDSLVKMGDYY 625
Cdd:COG0790   82 DYEKALEWFEKAAEQGDAEAQYNLGLMY------------EEGLGVP----QDYAKALEWYEKAAEQGDADAQYNLGLLY 145

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 171687239 626 LHGIGAEPDVDKALQCYQGASEyQQSAQAMYNLGWMHEHGVGLQQDYHLAKRHYDAAYE 684
Cdd:COG0790  146 LNGEGVPKDPAKAAEWYRKAAE-QGDADAQYNLGVLYENGRGVPKDPAKALEWYRKAAE 203
 
Name Accession Description Interval E-value
TPR COG0790
TPR repeat [General function prediction only];
277-528 2.27e-28

TPR repeat [General function prediction only];


Pssm-ID: 440553 [Multi-domain]  Cd Length: 241  Bit Score: 114.26  E-value: 2.27e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 171687239 277 RWVDEAHRIADELGGVYGEGASAYSAGRESVQKSPDSYASIEDIIEYLNLMSEKGDFKASFNLGRIYYEGQrGHEINLAE 356
Cdd:COG0790    7 AAAAAAAAAAALAAAAAAAGAAAAAAAAAAAAAALAAAAGAAAAAAAAAAAAAAGGAEAQYNLGLMYAEGR-GVPKDYEK 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 171687239 357 AKRYFYEVAQQywvkGQqvqnpkpgldkyaAKAAGYIGRMYMRGEGVDQNFIRAKYWFERGSYLKDSQSQYSLGLLYLNG 436
Cdd:COG0790   86 ALEWFEKAAEQ----GD-------------AEAQYNLGLMYEEGLGVPQDYAKALEWYEKAAEQGDADAQYNLGLLYLNG 148

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 171687239 437 YGVPVDVPKATEYFKAAAMQDYPYAEVALGALHLD-QGGTDDLAAANHYFELAARWASIESYYYLGELNLLGVGREKSCS 515
Cdd:COG0790  149 EGVPKDPAKAAEWYRKAAEQGDADAQYNLGVLYENgRGVPKDPAKALEWYRKAAEQGDADAQYNLGRLYLNGEGVEKDLE 228

                        250
                 ....*....|...
gi 171687239 516 AALGYFKSVSERA 528
Cdd:COG0790  229 KALRWLRKAAEQA 241
TPR COG0790
TPR repeat [General function prediction only];
141-416 1.65e-19

TPR repeat [General function prediction only];


Pssm-ID: 440553 [Multi-domain]  Cd Length: 241  Bit Score: 88.83  E-value: 1.65e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 171687239 141 ASKLLNEAARQNNSDALYILAEMNFYGNfSHPRNFKEAFDNYHKLAlLNGNNSALYMMGLMYSTGIGgaVEADQARALLY 220
Cdd:COG0790   50 AAAAAAAAAAAGGAEAQYNLGLMYAEGR-GVPKDYEKALEWFEKAA-EQGDAEAQYNLGLMYEEGLG--VPQDYAKALEW 125

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 171687239 221 YTFAANRGHTRAQMSLAYRHHAGIGTPKNCDVAVKYYKQVAdkviawyrsgppggmrwvdeahriadelggvygegasay 300
Cdd:COG0790  126 YEKAAEQGDADAQYNLGLLYLNGEGVPKDPAKAAEWYRKAA--------------------------------------- 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 171687239 301 sagresvqkspdsyasiediieylnlmsEKGDFKASFNLGRIYYEGqRGHEINLAEAKRYFYEVAQQywvkGQqvqnpkp 380
Cdd:COG0790  167 ----------------------------EQGDADAQYNLGVLYENG-RGVPKDPAKALEWYRKAAEQ----GD------- 206

                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 171687239 381 gldkyaAKAAGYIGRMYMRGEGVDQNFIRAKYWFER 416
Cdd:COG0790  207 ------ADAQYNLGRLYLNGEGVEKDLEKALRWLRK 236
TPR COG0790
TPR repeat [General function prediction only];
546-684 9.77e-18

TPR repeat [General function prediction only];


Pssm-ID: 440553 [Multi-domain]  Cd Length: 241  Bit Score: 83.44  E-value: 9.77e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 171687239 546 DEELALLEYLGAAEQGYEKAQNNVAFMLdpeqslleipqwLYRRAVKspllRNPRLALTYWTRSARQGNIDSLVKMGDYY 625
Cdd:COG0790   82 DYEKALEWFEKAAEQGDAEAQYNLGLMY------------EEGLGVP----QDYAKALEWYEKAAEQGDADAQYNLGLLY 145

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 171687239 626 LHGIGAEPDVDKALQCYQGASEyQQSAQAMYNLGWMHEHGVGLQQDYHLAKRHYDAAYE 684
Cdd:COG0790  146 LNGEGVPKDPAKAAEWYRKAAE-QGDADAQYNLGVLYENGRGVPKDPAKALEWYRKAAE 203
SEL1 smart00671
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.
 423-458 5.36e-06

Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.


Pssm-ID: 214772 [Multi-domain]  Cd Length: 36  Bit Score: 43.70  E-value: 5.36e-06
                           10        20        30
                   ....*....|....*....|....*....|....*.
gi 171687239   423 SQSQYSLGLLYLNGYGVPVDVPKATEYFKAAAMQDY 458
Cdd:smart00671   1 AEAQYNLGQMYEYGLGVPKDLEKALEYYKKAAELGN 36
SEL1 smart00671
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.
 652-684 3.02e-05

Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.


Pssm-ID: 214772 [Multi-domain]  Cd Length: 36  Bit Score: 41.78  E-value: 3.02e-05
                           10        20        30
                   ....*....|....*....|....*....|...
gi 171687239   652 AQAMYNLGWMHEHGVGLQQDYHLAKRHYDAAYE 684
Cdd:smart00671   1 AEAQYNLGQMYEYGLGVPKDLEKALEYYKKAAE 33
Sel1 pfam08238
Sel1 repeat; This short repeat is found in the Sel1 protein. It is related to TPR repeats.
 423-457 4.22e-04

Sel1 repeat; This short repeat is found in the Sel1 protein. It is related to TPR repeats.


Pssm-ID: 429881 [Multi-domain]  Cd Length: 35  Bit Score: 38.27  E-value: 4.22e-04
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 171687239  423 SQSQYSLGLLYLNGYGVPVDVPKATEYFKAAAMQD 457
Cdd:pfam08238   1 AEAQYRLGYLYLYGLGVPKDPEKALEWYEKAAELG 35
Sel1 pfam08238
Sel1 repeat; This short repeat is found in the Sel1 protein. It is related to TPR repeats.
 652-684 5.61e-04

Sel1 repeat; This short repeat is found in the Sel1 protein. It is related to TPR repeats.


Pssm-ID: 429881 [Multi-domain]  Cd Length: 35  Bit Score: 37.89  E-value: 5.61e-04
                          10        20        30
                  ....*....|....*....|....*....|...
gi 171687239  652 AQAMYNLGWMHEHGVGLQQDYHLAKRHYDAAYE 684
Cdd:pfam08238   1 AEAQYRLGYLYLYGLGVPKDPEKALEWYEKAAE 33
SEL1 smart00671
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.
 232-263 1.77e-03

Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.


Pssm-ID: 214772 [Multi-domain]  Cd Length: 36  Bit Score: 36.77  E-value: 1.77e-03
                           10        20        30
                   ....*....|....*....|....*....|..
gi 171687239   232 AQMSLAYRHHAGIGTPKNCDVAVKYYKQVADK 263
Cdd:smart00671   3 AQYNLGQMYEYGLGVPKDLEKALEYYKKAAEL 34
 
Name Accession Description Interval E-value
TPR COG0790
TPR repeat [General function prediction only];
277-528 2.27e-28

TPR repeat [General function prediction only];


Pssm-ID: 440553 [Multi-domain]  Cd Length: 241  Bit Score: 114.26  E-value: 2.27e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 171687239 277 RWVDEAHRIADELGGVYGEGASAYSAGRESVQKSPDSYASIEDIIEYLNLMSEKGDFKASFNLGRIYYEGQrGHEINLAE 356
Cdd:COG0790    7 AAAAAAAAAAALAAAAAAAGAAAAAAAAAAAAAALAAAAGAAAAAAAAAAAAAAGGAEAQYNLGLMYAEGR-GVPKDYEK 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 171687239 357 AKRYFYEVAQQywvkGQqvqnpkpgldkyaAKAAGYIGRMYMRGEGVDQNFIRAKYWFERGSYLKDSQSQYSLGLLYLNG 436
Cdd:COG0790   86 ALEWFEKAAEQ----GD-------------AEAQYNLGLMYEEGLGVPQDYAKALEWYEKAAEQGDADAQYNLGLLYLNG 148

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 171687239 437 YGVPVDVPKATEYFKAAAMQDYPYAEVALGALHLD-QGGTDDLAAANHYFELAARWASIESYYYLGELNLLGVGREKSCS 515
Cdd:COG0790  149 EGVPKDPAKAAEWYRKAAEQGDADAQYNLGVLYENgRGVPKDPAKALEWYRKAAEQGDADAQYNLGRLYLNGEGVEKDLE 228

                        250
                 ....*....|...
gi 171687239 516 AALGYFKSVSERA 528
Cdd:COG0790  229 KALRWLRKAAEQA 241
TPR COG0790
TPR repeat [General function prediction only];
355-560 1.28e-25

TPR repeat [General function prediction only];


Pssm-ID: 440553 [Multi-domain]  Cd Length: 241  Bit Score: 106.55  E-value: 1.28e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 171687239 355 AEAKRYFYEVAQQYWVKGQQVQNPKPGLDKYAAKAAGYIGRMYMRGEGVDQNFIRAKYWFERGSYLKDSQSQYSLGLLYL 434
Cdd:COG0790   31 AAAAAAAAAALAAAAGAAAAAAAAAAAAAAGGAEAQYNLGLMYAEGRGVPKDYEKALEWFEKAAEQGDAEAQYNLGLMYE 110

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 171687239 435 NGYGVPVDVPKATEYFKAAAMQDYPYAEVALGALHLD-QGGTDDLAAANHYFELAARWASIESYYYLGELNLLGVGREKS 513
Cdd:COG0790  111 EGLGVPQDYAKALEWYEKAAEQGDADAQYNLGLLYLNgEGVPKDPAKAAEWYRKAAEQGDADAQYNLGVLYENGRGVPKD 190

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....
gi 171687239 514 CSAALGYFKSVSERAEPfvssWAEANLA--YDDG-----DEELALLEYLGAAEQ 560
Cdd:COG0790  191 PAKALEWYRKAAEQGDA----DAQYNLGrlYLNGegvekDLEKALRWLRKAAEQ 240
TPR COG0790
TPR repeat [General function prediction only];
184-492 8.41e-25

TPR repeat [General function prediction only];


Pssm-ID: 440553 [Multi-domain]  Cd Length: 241  Bit Score: 104.24  E-value: 8.41e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 171687239 184 KLALLNGNNSALYMMGLMYSTGIGGAVEADQARALLYYTFAANRGHTRAQMSLAYRHHAGIGTPKNCDVAVKYYKQVAdk 263
Cdd:COG0790   17 ALAAAAAAAGAAAAAAAAAAAAAALAAAAGAAAAAAAAAAAAAAGGAEAQYNLGLMYAEGRGVPKDYEKALEWFEKAA-- 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 171687239 264 viawyrsgppggmrwvdeahriadelggvygegasaysagresvqkspdsyasiediieylnlmsEKGDFKASFNLGRIY 343
Cdd:COG0790   95 -----------------------------------------------------------------EQGDAEAQYNLGLMY 109

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 171687239 344 YEGqRGHEINLAEAKRYFYEVAQQywvkgqqvqnpkpGLdkyaAKAAGYIGRMYMRGEGVDQNFIRAKYWFERGSYLKDS 423
Cdd:COG0790  110 EEG-LGVPQDYAKALEWYEKAAEQ-------------GD----ADAQYNLGLLYLNGEGVPKDPAKAAEWYRKAAEQGDA 171

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 171687239 424 QSQYSLGLLYLNGYGVPVDVPKATEYFKAAAMQDYPYAEVALGALHLD-QGGTDDLAAANHYFELAARWA 492
Cdd:COG0790  172 DAQYNLGVLYENGRGVPKDPAKALEWYRKAAEQGDADAQYNLGRLYLNgEGVEKDLEKALRWLRKAAEQA 241
TPR COG0790
TPR repeat [General function prediction only];
177-456 1.78e-23

TPR repeat [General function prediction only];


Pssm-ID: 440553 [Multi-domain]  Cd Length: 241  Bit Score: 100.39  E-value: 1.78e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 171687239 177 EAFDNYHKLALLNGNNSALYMMGLMYSTGIGgaVEADQARALLYYTFAANRGHTRAQMSLAYRHHAGIGTPKNCDVAVKY 256
Cdd:COG0790   48 AAAAAAAAAAAAAGGAEAQYNLGLMYAEGRG--VPKDYEKALEWFEKAAEQGDAEAQYNLGLMYEEGLGVPQDYAKALEW 125

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 171687239 257 YKQVAdkviawyrsgppggmrwvdeahriadelggvygegasaysagresvqkspdsyasiediieylnlmsEKGDFKAS 336
Cdd:COG0790  126 YEKAA-------------------------------------------------------------------EQGDADAQ 138

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 171687239 337 FNLGRIYYEGqRGHEINLAEAKRYFYEVAQQywvkGQqvqnpkpgldkyaAKAAGYIGRMYMRGEGVDQNFIRAKYWFER 416
Cdd:COG0790  139 YNLGLLYLNG-EGVPKDPAKAAEWYRKAAEQ----GD-------------ADAQYNLGVLYENGRGVPKDPAKALEWYRK 200

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|
gi 171687239 417 GSYLKDSQSQYSLGLLYLNGYGVPVDVPKATEYFKAAAMQ 456
Cdd:COG0790  201 AAEQGDADAQYNLGRLYLNGEGVEKDLEKALRWLRKAAEQ 240
TPR COG0790
TPR repeat [General function prediction only];
386-647 5.42e-22

TPR repeat [General function prediction only];


Pssm-ID: 440553 [Multi-domain]  Cd Length: 241  Bit Score: 95.77  E-value: 5.42e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 171687239 386 AAKAAGYIGRMYMRGEGVDQNFIRAKYWFERGSYLKDSQSQYSLGLLYLNGYGVPVDVPKATEYFKAAAMQDYPYAEVAL 465
Cdd:COG0790   26 GAAAAAAAAAAAAAALAAAAGAAAAAAAAAAAAAAGGAEAQYNLGLMYAEGRGVPKDYEKALEWFEKAAEQGDAEAQYNL 105

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 171687239 466 GALHLDQGGTD-DLAAANHYFELAARWASIESYYYLGELNLLGVGREKSCSAALGYFKSvseraepfvsswaeanlaydd 544
Cdd:COG0790  106 GLMYEEGLGVPqDYAKALEWYEKAAEQGDADAQYNLGLLYLNGEGVPKDPAKAAEWYRK--------------------- 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 171687239 545 gdeelalleylgAAEQGYEKAQNNVAfmldpeqslleipqWLYRRAVKSPllRNPRLALTYWTRSARQGNIDSLVKMGDY 624
Cdd:COG0790  165 ------------AAEQGDADAQYNLG--------------VLYENGRGVP--KDPAKALEWYRKAAEQGDADAQYNLGRL 216

                        250       260
                 ....*....|....*....|...
gi 171687239 625 YLHGIGAEPDVDKALQCYQGASE 647
Cdd:COG0790  217 YLNGEGVEKDLEKALRWLRKAAE 239
TPR COG0790
TPR repeat [General function prediction only];
141-416 1.65e-19

TPR repeat [General function prediction only];


Pssm-ID: 440553 [Multi-domain]  Cd Length: 241  Bit Score: 88.83  E-value: 1.65e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 171687239 141 ASKLLNEAARQNNSDALYILAEMNFYGNfSHPRNFKEAFDNYHKLAlLNGNNSALYMMGLMYSTGIGgaVEADQARALLY 220
Cdd:COG0790   50 AAAAAAAAAAAGGAEAQYNLGLMYAEGR-GVPKDYEKALEWFEKAA-EQGDAEAQYNLGLMYEEGLG--VPQDYAKALEW 125

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 171687239 221 YTFAANRGHTRAQMSLAYRHHAGIGTPKNCDVAVKYYKQVAdkviawyrsgppggmrwvdeahriadelggvygegasay 300
Cdd:COG0790  126 YEKAAEQGDADAQYNLGLLYLNGEGVPKDPAKAAEWYRKAA--------------------------------------- 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 171687239 301 sagresvqkspdsyasiediieylnlmsEKGDFKASFNLGRIYYEGqRGHEINLAEAKRYFYEVAQQywvkGQqvqnpkp 380
Cdd:COG0790  167 ----------------------------EQGDADAQYNLGVLYENG-RGVPKDPAKALEWYRKAAEQ----GD------- 206

                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 171687239 381 gldkyaAKAAGYIGRMYMRGEGVDQNFIRAKYWFER 416
Cdd:COG0790  207 ------ADAQYNLGRLYLNGEGVEKDLEKALRWLRK 236
TPR COG0790
TPR repeat [General function prediction only];
546-684 9.77e-18

TPR repeat [General function prediction only];


Pssm-ID: 440553 [Multi-domain]  Cd Length: 241  Bit Score: 83.44  E-value: 9.77e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 171687239 546 DEELALLEYLGAAEQGYEKAQNNVAFMLdpeqslleipqwLYRRAVKspllRNPRLALTYWTRSARQGNIDSLVKMGDYY 625
Cdd:COG0790   82 DYEKALEWFEKAAEQGDAEAQYNLGLMY------------EEGLGVP----QDYAKALEWYEKAAEQGDADAQYNLGLLY 145

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 171687239 626 LHGIGAEPDVDKALQCYQGASEyQQSAQAMYNLGWMHEHGVGLQQDYHLAKRHYDAAYE 684
Cdd:COG0790  146 LNGEGVPKDPAKAAEWYRKAAE-QGDADAQYNLGVLYENGRGVPKDPAKALEWYRKAAE 203
TPR COG0790
TPR repeat [General function prediction only];
141-263 9.35e-16

TPR repeat [General function prediction only];


Pssm-ID: 440553 [Multi-domain]  Cd Length: 241  Bit Score: 77.66  E-value: 9.35e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 171687239 141 ASKLLNEAARQNNSDALYILAEMNFYGNFShPRNFKEAFDNYHKlALLNGNNSALYMMGLMYSTGIGgaVEADQARALLY 220
Cdd:COG0790  122 ALEWYEKAAEQGDADAQYNLGLLYLNGEGV-PKDPAKAAEWYRK-AAEQGDADAQYNLGVLYENGRG--VPKDPAKALEW 197

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 171687239 221 YTFAANRGHTRAQMSLAYRHHAGIGTPKNCDVAVKYYKQVADK 263
Cdd:COG0790  198 YRKAAEQGDADAQYNLGRLYLNGEGVEKDLEKALRWLRKAAEQ 240
SEL1 smart00671
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.
 423-458 5.36e-06

Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.


Pssm-ID: 214772 [Multi-domain]  Cd Length: 36  Bit Score: 43.70  E-value: 5.36e-06
                           10        20        30
                   ....*....|....*....|....*....|....*.
gi 171687239   423 SQSQYSLGLLYLNGYGVPVDVPKATEYFKAAAMQDY 458
Cdd:smart00671   1 AEAQYNLGQMYEYGLGVPKDLEKALEYYKKAAELGN 36
SEL1 smart00671
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.
 652-684 3.02e-05

Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.


Pssm-ID: 214772 [Multi-domain]  Cd Length: 36  Bit Score: 41.78  E-value: 3.02e-05
                           10        20        30
                   ....*....|....*....|....*....|...
gi 171687239   652 AQAMYNLGWMHEHGVGLQQDYHLAKRHYDAAYE 684
Cdd:smart00671   1 AEAQYNLGQMYEYGLGVPKDLEKALEYYKKAAE 33
Sel1 pfam08238
Sel1 repeat; This short repeat is found in the Sel1 protein. It is related to TPR repeats.
 423-457 4.22e-04

Sel1 repeat; This short repeat is found in the Sel1 protein. It is related to TPR repeats.


Pssm-ID: 429881 [Multi-domain]  Cd Length: 35  Bit Score: 38.27  E-value: 4.22e-04
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 171687239  423 SQSQYSLGLLYLNGYGVPVDVPKATEYFKAAAMQD 457
Cdd:pfam08238   1 AEAQYRLGYLYLYGLGVPKDPEKALEWYEKAAELG 35
Sel1 pfam08238
Sel1 repeat; This short repeat is found in the Sel1 protein. It is related to TPR repeats.
 652-684 5.61e-04

Sel1 repeat; This short repeat is found in the Sel1 protein. It is related to TPR repeats.


Pssm-ID: 429881 [Multi-domain]  Cd Length: 35  Bit Score: 37.89  E-value: 5.61e-04
                          10        20        30
                  ....*....|....*....|....*....|...
gi 171687239  652 AQAMYNLGWMHEHGVGLQQDYHLAKRHYDAAYE 684
Cdd:pfam08238   1 AEAQYRLGYLYLYGLGVPKDPEKALEWYEKAAE 33
SEL1 smart00671
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.
 232-263 1.77e-03

Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.


Pssm-ID: 214772 [Multi-domain]  Cd Length: 36  Bit Score: 36.77  E-value: 1.77e-03
                           10        20        30
                   ....*....|....*....|....*....|..
gi 171687239   232 AQMSLAYRHHAGIGTPKNCDVAVKYYKQVADK 263
Cdd:smart00671   3 AQYNLGQMYEYGLGVPKDLEKALEYYKKAAEL 34
SEL1 smart00671
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.
 194-229 2.05e-03

Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.


Pssm-ID: 214772 [Multi-domain]  Cd Length: 36  Bit Score: 36.38  E-value: 2.05e-03
                           10        20        30
                   ....*....|....*....|....*....|....*.
gi 171687239   194 ALYMMGLMYSTGIGgaVEADQARALLYYTFAANRGH 229
Cdd:smart00671   3 AQYNLGQMYEYGLG--VPKDLEKALEYYKKAAELGN 36
NlpI COG4785
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
536-705 2.18e-03

Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 443815 [Multi-domain]  Cd Length: 223  Bit Score: 40.67  E-value: 2.18e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 171687239 536 AEANLAYDDGDEELALLEYLGAAEQGYEKAQnnvafmlDPEQSLLEIPQWLYRRAVKSPLLRNPRLALTYWTRSAR--QG 613
Cdd:COG4785   33 AVLALAIALADLALALAAAALAAAALAAERI-------DRALALPDLAQLYYERGVAYDSLGDYDLAIADFDQALEldPD 105

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 171687239 614 NIDSLVKMGDYYLhgigAEPDVDKALQCYQGASEYQ-QSAQAMYNLGWMHEHGvglqQDYHLAKRHYDAAYEINE---EA 689
Cdd:COG4785  106 LAEAYNNRGLAYL----LLGDYDAALEDFDRALELDpDYAYAYLNRGIALYYL----GRYELAIADLEKALELDPndpER 177

                        170
                 ....*....|....*.
gi 171687239 690 YLPVSLSLLKLRAKSA 705
Cdd:COG4785  178 ALWLYLAERKLDPEKA 193
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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