NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|966966000|ref|XP_001094366|]
View 

dolichol-phosphate mannosyltransferase subunit 1 [Macaca mulatta]

Protein Classification

polyprenol monophosphomannose synthase( domain architecture ID 11477088)

polyprenol monophosphomannose synthase transfers mannose from GDP-mannose to lipid acceptors, such as dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man)

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
PLN02726 PLN02726
dolichyl-phosphate beta-D-mannosyltransferase
 23-260 3.19e-152

dolichyl-phosphate beta-D-mannosyltransferase


:

Pssm-ID: 215385 [Multi-domain]  Cd Length: 243  Bit Score: 423.72  E-value: 3.19e-152
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000  23 RRDKYSVLLPTYNERENLPLIVWLLVKSFSESGiNYEIIIIDDGSPDGTRDVAEQLEKIYGSDRILLKPREKKLGLGTAY 102
Cdd:PLN02726   7 GAMKYSIIVPTYNERLNIALIVYLIFKALQDVK-DFEIIVVDDGSPDGTQDVVKQLQKVYGEDRILLRPRPGKLGLGTAY 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000 103 IHGMKHATGNYIIIMDADLSHHPKFIPEFIRKQKEGNFDIVSGTRYKGNGGVYGWDLKRKIISRGANFLTQILLRPGASD 182
Cdd:PLN02726  86 IHGLKHASGDFVVIMDADLSHHPKYLPSFIKKQRETGADIVTGTRYVKGGGVHGWDLRRKLTSRGANVLAQTLLWPGVSD 165

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 966966000 183 LTGSFRLYRKEVLEKLIEKCVSKGYVFQMEMIVRARQLNYTIGEVPISFVDRVYGESKLGGNEIVSFLKGLLTLFATT 260
Cdd:PLN02726 166 LTGSFRLYKRSALEDLVSSVVSKGYVFQMEIIVRASRKGYRIEEVPITFVDRVYGESKLGGSEIVQYLKGLLYLLLTT 243
 
Name Accession Description Interval E-value
PLN02726 PLN02726
dolichyl-phosphate beta-D-mannosyltransferase
 23-260 3.19e-152

dolichyl-phosphate beta-D-mannosyltransferase


Pssm-ID: 215385 [Multi-domain]  Cd Length: 243  Bit Score: 423.72  E-value: 3.19e-152
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000  23 RRDKYSVLLPTYNERENLPLIVWLLVKSFSESGiNYEIIIIDDGSPDGTRDVAEQLEKIYGSDRILLKPREKKLGLGTAY 102
Cdd:PLN02726   7 GAMKYSIIVPTYNERLNIALIVYLIFKALQDVK-DFEIIVVDDGSPDGTQDVVKQLQKVYGEDRILLRPRPGKLGLGTAY 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000 103 IHGMKHATGNYIIIMDADLSHHPKFIPEFIRKQKEGNFDIVSGTRYKGNGGVYGWDLKRKIISRGANFLTQILLRPGASD 182
Cdd:PLN02726  86 IHGLKHASGDFVVIMDADLSHHPKYLPSFIKKQRETGADIVTGTRYVKGGGVHGWDLRRKLTSRGANVLAQTLLWPGVSD 165

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 966966000 183 LTGSFRLYRKEVLEKLIEKCVSKGYVFQMEMIVRARQLNYTIGEVPISFVDRVYGESKLGGNEIVSFLKGLLTLFATT 260
Cdd:PLN02726 166 LTGSFRLYKRSALEDLVSSVVSKGYVFQMEIIVRASRKGYRIEEVPITFVDRVYGESKLGGSEIVQYLKGLLYLLLTT 243
DPM1_like cd06442
DPM1_like represents putative enzymes similar to eukaryotic DPM1; Proteins similar to ...
 29-256 3.25e-133

DPM1_like represents putative enzymes similar to eukaryotic DPM1; Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. This protein family belongs to Glycosyltransferase 2 superfamily.


Pssm-ID: 133062 [Multi-domain]  Cd Length: 224  Bit Score: 374.95  E-value: 3.25e-133
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000  29 VLLPTYNERENLPLIVWLLVKSFSesGINYEIIIIDDGSPDGTRDVAEQLEKIYGsdRILLKPREKKLGLGTAYIHGMKH 108
Cdd:cd06442    1 IIIPTYNERENIPELIERLDAALK--GIDYEIIVVDDNSPDGTAEIVRELAKEYP--RVRLIVRPGKRGLGSAYIEGFKA 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000 109 ATGNYIIIMDADLSHHPKFIPEFIRKQKEGNFDIVSGTRYKGNGGVYGWDLKRKIISRGANFLTQILLRPGASDLTGSFR 188
Cdd:cd06442   77 ARGDVIVVMDADLSHPPEYIPELLEAQLEGGADLVIGSRYVEGGGVEGWGLKRKLISRGANLLARLLLGRKVSDPTSGFR 156

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 966966000 189 LYRKEVLEKLIEKCVSKGYVFQMEMIVRARQLNYTIGEVPISFVDRVYGESKLGGNEIVSFLKGLLTL 256
Cdd:cd06442  157 AYRREVLEKLIDSLVSKGYKFQLELLVRARRLGYRIVEVPITFVDREHGESKLGGKEIVEYLKGLLRL 224
WcaA COG0463
Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]; ...
 26-250 4.90e-49

Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 440231 [Multi-domain]  Cd Length: 208  Bit Score: 160.64  E-value: 4.90e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000  26 KYSVLLPTYNERENLPLivwlLVKSFSE-SGINYEIIIIDDGSPDGTRDVAEQLEKIYgsDRILLKPREKKLGLGTAYIH 104
Cdd:COG0463    3 LVSVVIPTYNEEEYLEE----ALESLLAqTYPDFEIIVVDDGSTDGTAEILRELAAKD--PRIRVIRLERNRGKGAARNA 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000 105 GMKHATGNYIIIMDADLSHHPKFIPEFIRKQKEGNFDIVSGTRYKGNGGVygwdLKRKIISRGANFLTQILLRPgasDLT 184
Cdd:COG0463   77 GLAAARGDYIAFLDADDQLDPEKLEELVAALEEGPADLVYGSRLIREGES----DLRRLGSRLFNLVRLLTNLP---DST 149

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 966966000 185 GSFRLYRKEVLEKLIekcVSKGYVFQMEMIvRARQLNYTIGEVPISFVDrvyGESKLGGNEIVSFL 250
Cdd:COG0463  150 SGFRLFRREVLEELG---FDEGFLEDTELL-RALRHGFRIAEVPVRYRA---GESKLNLRDLLRLL 208
Glycos_transf_2 pfam00535
Glycosyl transferase family 2; Diverse family, transferring sugar from UDP-glucose, ...
 28-197 2.16e-43

Glycosyl transferase family 2; Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.


Pssm-ID: 425738 [Multi-domain]  Cd Length: 166  Bit Score: 144.85  E-value: 2.16e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000   28 SVLLPTYNERENLPLIVWLLVKSFSEsgiNYEIIIIDDGSPDGTRDVAEQLEKIYgsDRILLKPREKKLGLGTAYIHGMK 107
Cdd:pfam00535   1 SVIIPTYNEEKYLLETLESLLNQTYP---NFEIIVVDDGSTDGTVEIAEEYAKKD--PRVRVIRLPENRGKAGARNAGLR 75

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000  108 HATGNYIIIMDADLSHHPKFIPEFIRKQKEGNFDIVSGTRYKGNGGVYGWDL-KRKIISRGANFLTQILLRPGASDLTGS 186
Cdd:pfam00535  76 AATGDYIAFLDADDEVPPDWLEKLVEALEEDGADVVVGSRYVIFGETGEYRRaSRITLSRLPFFLGLRLLGLNLPFLIGG 155

                         170
                  ....*....|.
gi 966966000  187 FRLYRKEVLEK 197
Cdd:pfam00535 156 FALYRREALEE 166
 
Name Accession Description Interval E-value
PLN02726 PLN02726
dolichyl-phosphate beta-D-mannosyltransferase
 23-260 3.19e-152

dolichyl-phosphate beta-D-mannosyltransferase


Pssm-ID: 215385 [Multi-domain]  Cd Length: 243  Bit Score: 423.72  E-value: 3.19e-152
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000  23 RRDKYSVLLPTYNERENLPLIVWLLVKSFSESGiNYEIIIIDDGSPDGTRDVAEQLEKIYGSDRILLKPREKKLGLGTAY 102
Cdd:PLN02726   7 GAMKYSIIVPTYNERLNIALIVYLIFKALQDVK-DFEIIVVDDGSPDGTQDVVKQLQKVYGEDRILLRPRPGKLGLGTAY 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000 103 IHGMKHATGNYIIIMDADLSHHPKFIPEFIRKQKEGNFDIVSGTRYKGNGGVYGWDLKRKIISRGANFLTQILLRPGASD 182
Cdd:PLN02726  86 IHGLKHASGDFVVIMDADLSHHPKYLPSFIKKQRETGADIVTGTRYVKGGGVHGWDLRRKLTSRGANVLAQTLLWPGVSD 165

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 966966000 183 LTGSFRLYRKEVLEKLIEKCVSKGYVFQMEMIVRARQLNYTIGEVPISFVDRVYGESKLGGNEIVSFLKGLLTLFATT 260
Cdd:PLN02726 166 LTGSFRLYKRSALEDLVSSVVSKGYVFQMEIIVRASRKGYRIEEVPITFVDRVYGESKLGGSEIVQYLKGLLYLLLTT 243
DPM1_like cd06442
DPM1_like represents putative enzymes similar to eukaryotic DPM1; Proteins similar to ...
 29-256 3.25e-133

DPM1_like represents putative enzymes similar to eukaryotic DPM1; Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. This protein family belongs to Glycosyltransferase 2 superfamily.


Pssm-ID: 133062 [Multi-domain]  Cd Length: 224  Bit Score: 374.95  E-value: 3.25e-133
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000  29 VLLPTYNERENLPLIVWLLVKSFSesGINYEIIIIDDGSPDGTRDVAEQLEKIYGsdRILLKPREKKLGLGTAYIHGMKH 108
Cdd:cd06442    1 IIIPTYNERENIPELIERLDAALK--GIDYEIIVVDDNSPDGTAEIVRELAKEYP--RVRLIVRPGKRGLGSAYIEGFKA 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000 109 ATGNYIIIMDADLSHHPKFIPEFIRKQKEGNFDIVSGTRYKGNGGVYGWDLKRKIISRGANFLTQILLRPGASDLTGSFR 188
Cdd:cd06442   77 ARGDVIVVMDADLSHPPEYIPELLEAQLEGGADLVIGSRYVEGGGVEGWGLKRKLISRGANLLARLLLGRKVSDPTSGFR 156

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 966966000 189 LYRKEVLEKLIEKCVSKGYVFQMEMIVRARQLNYTIGEVPISFVDRVYGESKLGGNEIVSFLKGLLTL 256
Cdd:cd06442  157 AYRREVLEKLIDSLVSKGYKFQLELLVRARRLGYRIVEVPITFVDREHGESKLGGKEIVEYLKGLLRL 224
DPM_DPG-synthase_like cd04179
DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily; DPM1 is the ...
 29-217 2.14e-74

DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. The UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate. This protein family belongs to Glycosyltransferase 2 superfamily.


Pssm-ID: 133022 [Multi-domain]  Cd Length: 185  Bit Score: 224.37  E-value: 2.14e-74
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000  29 VLLPTYNERENLPLIVWLLvKSFSESGINYEIIIIDDGSPDGTRDVAEQLEKIYGSDRILLkpREKKLGLGTAYIHGMKH 108
Cdd:cd04179    1 VVIPAYNEEENIPELVERL-LAVLEEGYDYEIIVVDDGSTDGTAEIARELAARVPRVRVIR--LSRNFGKGAAVRAGFKA 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000 109 ATGNYIIIMDADLSHHPKFIPEFIRKQKEGNFDIVSGTRYKGNGGVyGWDLKRKIISRGANFLTQILLRPGASDLTGSFR 188
Cdd:cd04179   78 ARGDIVVTMDADLQHPPEDIPKLLEKLLEGGADVVIGSRFVRGGGA-GMPLLRRLGSRLFNFLIRLLLGVRISDTQSGFR 156

                        170       180
                 ....*....|....*....|....*....
gi 966966000 189 LYRKEVLEKLIEKCVSKGYVFQMEMIVRA 217
Cdd:cd04179  157 LFRREVLEALLSLLESNGFEFGLELLVGA 185
WcaA COG0463
Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]; ...
 26-250 4.90e-49

Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 440231 [Multi-domain]  Cd Length: 208  Bit Score: 160.64  E-value: 4.90e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000  26 KYSVLLPTYNERENLPLivwlLVKSFSE-SGINYEIIIIDDGSPDGTRDVAEQLEKIYgsDRILLKPREKKLGLGTAYIH 104
Cdd:COG0463    3 LVSVVIPTYNEEEYLEE----ALESLLAqTYPDFEIIVVDDGSTDGTAEILRELAAKD--PRIRVIRLERNRGKGAARNA 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000 105 GMKHATGNYIIIMDADLSHHPKFIPEFIRKQKEGNFDIVSGTRYKGNGGVygwdLKRKIISRGANFLTQILLRPgasDLT 184
Cdd:COG0463   77 GLAAARGDYIAFLDADDQLDPEKLEELVAALEEGPADLVYGSRLIREGES----DLRRLGSRLFNLVRLLTNLP---DST 149

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 966966000 185 GSFRLYRKEVLEKLIekcVSKGYVFQMEMIvRARQLNYTIGEVPISFVDrvyGESKLGGNEIVSFL 250
Cdd:COG0463  150 SGFRLFRREVLEELG---FDEGFLEDTELL-RALRHGFRIAEVPVRYRA---GESKLNLRDLLRLL 208
Glycos_transf_2 pfam00535
Glycosyl transferase family 2; Diverse family, transferring sugar from UDP-glucose, ...
 28-197 2.16e-43

Glycosyl transferase family 2; Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.


Pssm-ID: 425738 [Multi-domain]  Cd Length: 166  Bit Score: 144.85  E-value: 2.16e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000   28 SVLLPTYNERENLPLIVWLLVKSFSEsgiNYEIIIIDDGSPDGTRDVAEQLEKIYgsDRILLKPREKKLGLGTAYIHGMK 107
Cdd:pfam00535   1 SVIIPTYNEEKYLLETLESLLNQTYP---NFEIIVVDDGSTDGTVEIAEEYAKKD--PRVRVIRLPENRGKAGARNAGLR 75

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000  108 HATGNYIIIMDADLSHHPKFIPEFIRKQKEGNFDIVSGTRYKGNGGVYGWDL-KRKIISRGANFLTQILLRPGASDLTGS 186
Cdd:pfam00535  76 AATGDYIAFLDADDEVPPDWLEKLVEALEEDGADVVVGSRYVIFGETGEYRRaSRITLSRLPFFLGLRLLGLNLPFLIGG 155

                         170
                  ....*....|.
gi 966966000  187 FRLYRKEVLEK 197
Cdd:pfam00535 156 FALYRREALEE 166
DPG_synthase cd04188
DPG_synthase is involved in protein N-linked glycosylation; UDP-glucose:dolichyl-phosphate ...
 29-240 4.60e-40

DPG_synthase is involved in protein N-linked glycosylation; UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.


Pssm-ID: 133031 [Multi-domain]  Cd Length: 211  Bit Score: 137.70  E-value: 4.60e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000  29 VLLPTYNERENLPLIVWLLVKSFSES-GINYEIIIIDDGSPDGTRDVAEQLEKIYGSDRILLKpREKKLGLGTAYIHGMK 107
Cdd:cd04188    1 VVIPAYNEEKRLPPTLEEAVEYLEERpSFSYEIIVVDDGSKDGTAEVARKLARKNPALIRVLT-LPKNRGKGGAVRAGML 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000 108 HATGNYIIIMDADLSHHPKFIPEFIRKQKEGNFDIVSGTRYK-GNGGVYGWDLKRKIISRGANFLTQILLRPGASDLTGS 186
Cdd:cd04188   80 AARGDYILFADADLATPFEELEKLEEALKTSGYDIAIGSRAHlASAAVVKRSWLRNLLGRGFNFLVRLLLGLGIKDTQCG 159

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....
gi 966966000 187 FRLYRKEVLEKLIEKCVSKGYVFQMEMIVRARQLNYTIGEVPISFVDRvyGESK 240
Cdd:cd04188  160 FKLFTRDAARRLFPRLHLERWAFDVELLVLARRLGYPIEEVPVRWVEI--PGSK 211
DPM1_like_bac cd04187
Bacterial DPM1_like enzymes are related to eukaryotic DPM1; A family of bacterial enzymes ...
 29-200 3.28e-36

Bacterial DPM1_like enzymes are related to eukaryotic DPM1; A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.


Pssm-ID: 133030 [Multi-domain]  Cd Length: 181  Bit Score: 126.82  E-value: 3.28e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000  29 VLLPTYNERENLPLIVWLLVKSFSESGINYEIIIIDDGSPDGTRDVAEQLEKIYGSDRILlkprekKL----GLGTAYIH 104
Cdd:cd04187    1 IVVPVYNEEENLPELYERLKAVLESLGYDYEIIFVDDGSTDRTLEILRELAARDPRVKVI------RLsrnfGQQAALLA 74

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000 105 GMKHATGNYIIIMDADLSHHPKFIPEFIRKQKEGnFDIVSGTRYKGNGGVYgwdlkRKIISRGANFLTQILLRPGASDLT 184
Cdd:cd04187   75 GLDHARGDAVITMDADLQDPPELIPEMLAKWEEG-YDVVYGVRKNRKESWL-----KRLTSKLFYRLINKLSGVDIPDNG 148

                        170
                 ....*....|....*.
gi 966966000 185 GSFRLYRKEVLEKLIE 200
Cdd:cd04187  149 GDFRLMDRKVVDALLL 164
Glyco_tranf_GTA_type cd00761
Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a ...
 29-146 1.56e-22

Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold; Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities.


Pssm-ID: 132997 [Multi-domain]  Cd Length: 156  Bit Score: 90.64  E-value: 1.56e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000  29 VLLPTYNERENLPLIVWLLVKSFSEsgiNYEIIIIDDGSPDGTRDVAEQLEKIYgsDRILLKPREKKLGLGTAYIHGMKH 108
Cdd:cd00761    1 VIIPAYNEEPYLERCLESLLAQTYP---NFEVIVVDDGSTDGTLEILEEYAKKD--PRVIRVINEENQGLAAARNAGLKA 75

                         90       100       110
                 ....*....|....*....|....*....|....*....
gi 966966000 109 ATGNYIIIMDADLSHHPKFIPEFIRK-QKEGNFDIVSGT 146
Cdd:cd00761   76 ARGEYILFLDADDLLLPDWLERLVAElLADPEADAVGGP 114
PRK10714 PRK10714
undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
 25-260 1.88e-20

undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional


Pssm-ID: 182669 [Multi-domain]  Cd Length: 325  Bit Score: 88.64  E-value: 1.88e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000  25 DKYSVLLPTYNERENLPLIVWLLVKSFSESGINYEIIIIDDGSPDGTRDVAEQLEKIYGSD--RILLKpreKKLGLGTAY 102
Cdd:PRK10714   6 KKVSVVIPVYNEQESLPELIRRTTAACESLGKEYEILLIDDGSSDNSAEMLVEAAQAPDSHivAILLN---RNYGQHSAI 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000 103 IHGMKHATGNYIIIMDADLSHHPKFIPEFIRKQKEGnFDIVSGTRYKGNGGVYgwdlkRKIISRGANFLTQILLRPGASD 182
Cdd:PRK10714  83 MAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADEG-YDVVGTVRQNRQDSWF-----RKTASKMINRLIQRTTGKAMGD 156

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 966966000 183 LTGSFRLYRKEVLEKLIEkCVSKGYVFQMEMIVRARQlnyTIgEVPISFVDRVYGESKLGGNEIVSFLKGLLTLFATT 260
Cdd:PRK10714 157 YGCMLRAYRRHIVDAMLH-CHERSTFIPILANTFARR---AI-EIPVHHAEREFGDSKYSFMRLINLMYDLVTCLTTT 229
BcsA COG1215
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1, ...
 26-232 2.06e-19

Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility];


Pssm-ID: 440828 [Multi-domain]  Cd Length: 303  Bit Score: 85.56  E-value: 2.06e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000  26 KYSVLLPTYNERENLPLivwlLVKSFSES---GINYEIIIIDDGSPDGTRDVAEQLEKIYGSDRILLKPREKklGLGTAY 102
Cdd:COG1215   30 RVSVIIPAYNEEAVIEE----TLRSLLAQdypKEKLEVIVVDDGSTDETAEIARELAAEYPRVRVIERPENG--GKAAAL 103

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000 103 IHGMKHATGNYIIIMDADLSHHPKFIPEFIRKqkegnfdivsgtrykgnggvygwdlkrkiisrganfltqiLLRPGAsD 182
Cdd:COG1215  104 NAGLKAARGDIVVFLDADTVLDPDWLRRLVAA----------------------------------------FADPGV-G 142

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 966966000 183 LTGSFRLYRKEVLEKLiekcvsKGYVFQ-----MEMIVRARQLNYTIGEVPISFV 232
Cdd:COG1215  143 ASGANLAFRREALEEV------GGFDEDtlgedLDLSLRLLRAGYRIVYVPDAVV 191
PTZ00260 PTZ00260
dolichyl-phosphate beta-glucosyltransferase; Provisional
 28-233 6.70e-16

dolichyl-phosphate beta-glucosyltransferase; Provisional


Pssm-ID: 240336 [Multi-domain]  Cd Length: 333  Bit Score: 75.96  E-value: 6.70e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000  28 SVLLPTYNERENLPL-----IVWLLVKSFSESGINYEIIIIDDGSPDGTRDVAEQL--EKIYGSDRILLKPREKKLGLGT 100
Cdd:PTZ00260  73 SIVIPAYNEEDRLPKmlketIKYLESRSRKDPKFKYEIIIVNDGSKDKTLKVAKDFwrQNINPNIDIRLLSLLRNKGKGG 152

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000 101 AYIHGMKHATGNYIIIMDADLSHHpkfIPEFIR------KQKEGNFDIVSGTR--YKGNGGVYGWDLKRKIISRGANFLT 172
Cdd:PTZ00260 153 AVRIGMLASRGKYILMVDADGATD---IDDFDKledimlKIEQNGLGIVFGSRnhLVDSDVVAKRKWYRNILMYGFHFIV 229

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 966966000 173 QILLRPGASDLTGSFRLYRKEVLEKLIEKCVSKGYVFQMEMIVRARQLNYTIGEVPISFVD 233
Cdd:PTZ00260 230 NTICGTNLKDTQCGFKLFTRETARIIFPSLHLERWAFDIEIVMIAQKLNLPIAEVPVNWTE 290
WcaE COG1216
Glycosyltransferase, GT2 family [Carbohydrate transport and metabolism];
23-141 1.09e-15

Glycosyltransferase, GT2 family [Carbohydrate transport and metabolism];


Pssm-ID: 440829 [Multi-domain]  Cd Length: 202  Bit Score: 73.10  E-value: 1.09e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000  23 RRDKYSVLLPTYNERENLPLivwlLVKSFSE-SGINYEIIIIDDGSPDGTRDVAEQLEkiygSDRILLKPREKKLGLGTA 101
Cdd:COG1216    1 MRPKVSVVIPTYNRPELLRR----CLESLLAqTYPPFEVIVVDNGSTDGTAELLAALA----FPRVRVIRNPENLGFAAA 72

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 966966000 102 YIHGMKHATGNYIIIMDADLSHHPKFIPE-------FIRK---QKEGNFD 141
Cdd:COG1216   73 RNLGLRAAGGDYLLFLDDDTVVEPDWLERllaaaclLIRRevfEEVGGFD 122
CESA_like cd06423
CESA_like is the cellulose synthase superfamily; The cellulose synthase (CESA) superfamily ...
 29-198 1.26e-15

CESA_like is the cellulose synthase superfamily; The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the elongation of beta-1,2 polyglucose chains of Glucan.


Pssm-ID: 133045 [Multi-domain]  Cd Length: 180  Bit Score: 72.65  E-value: 1.26e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000  29 VLLPTYNERENLPLIVWLLVKSFSEsgiNYEIIIIDDGSPDGTRDVAEQLEKIYGSDRILLKPREKKlGLGTAYIHGMKH 108
Cdd:cd06423    1 IIVPAYNEEAVIERTIESLLALDYP---KLEVIVVDDGSTDDTLEILEELAALYIRRVLVVRDKENG-GKAGALNAGLRH 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000 109 ATGNYIIIMDADLSHHPKFIPE-FIRKQKEGNFDIVSGtrykgnggvygwdlKRKIISRGANFLT----------QILLR 177
Cdd:cd06423   77 AKGDIVVVLDADTILEPDALKRlVVPFFADPKVGAVQG--------------RVRVRNGSENLLTrlqaieylsiFRLGR 142

                        170       180
                 ....*....|....*....|....*..
gi 966966000 178 PGASDL------TGSFRLYRKEVLEKL 198
Cdd:cd06423  143 RAQSALggvlvlSGAFGAFRREALREV 169
Succinoglycan_BP_ExoA cd02525
ExoA is involved in the biosynthesis of succinoglycan; Succinoglycan Biosynthesis Protein ExoA ...
 28-198 3.44e-14

ExoA is involved in the biosynthesis of succinoglycan; Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.


Pssm-ID: 133016 [Multi-domain]  Cd Length: 249  Bit Score: 69.95  E-value: 3.44e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000  28 SVLLPTYNERENLP-LIVWLLVKSFSESgiNYEIIIIDDGSPDGTRDVAEQLEKIYgsDRILLKPREKKLgLGTAYIHGM 106
Cdd:cd02525    3 SIIIPVRNEEKYIEeLLESLLNQSYPKD--LIEIIVVDGGSTDGTREIVQEYAAKD--PRIRLIDNPKRI-QSAGLNIGI 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000 107 KHATGNYIIIMDADlSHHPK-FIPEFIRKQKEGNFDIVSGTRYKGNGGVYGWDLKRKIISR----GANFltqillRPGAS 181
Cdd:cd02525   78 RNSRGDIIIRVDAH-AVYPKdYILELVEALKRTGADNVGGPMETIGESKFQKAIAVAQSSPlgsgGSAY------RGGAV 150

                        170       180
                 ....*....|....*....|.
gi 966966000 182 DL----TGSFRLYRKEVLEKL 198
Cdd:cd02525  151 KIgyvdTVHHGAYRREVFEKV 171
GT_2_like_e cd04192
Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse ...
 29-153 3.87e-11

Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.


Pssm-ID: 133035 [Multi-domain]  Cd Length: 229  Bit Score: 61.15  E-value: 3.87e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000  29 VLLPTYNERENLPLivwlLVKSFSEsgINY-----EIIIIDDGSPDGTRDVAE--------QLeKIYGSDRILLKPreKK 95
Cdd:cd04192    1 VVIAARNEAENLPR----LLQSLSA--LDYpkekfEVILVDDHSTDGTVQILEfaaakpnfQL-KILNNSRVSISG--KK 71

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 966966000  96 LGLGTAyihgMKHATGNYIIIMDADLSHHPKFIPEFIRK-QKEGNFDIVSGTRYKGNGG 153
Cdd:cd04192   72 NALTTA----IKAAKGDWIVTTDADCVVPSNWLLTFVAFiQKEQIGLVAGPVIYFKGKS 126
GT2_Chondriotin_Pol_N cd06420
N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase; Chondroitin ...
 29-149 1.31e-10

N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase; Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm to undergo cytokinesis and cell division. Chondroitin is synthesized as proteoglycans, sulfated and secreted to the cell surface or extracellular matrix.


Pssm-ID: 133042 [Multi-domain]  Cd Length: 182  Bit Score: 58.74  E-value: 1.31e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000  29 VLLPTYNERENLPLIVWLLVksfSESGINYEIIIIDDGSPDGTRDVAEQLEKIYGSDRILLkpREKKLGLGTAYI--HGM 106
Cdd:cd06420    1 LIITTYNRPEALELVLKSVL---NQSILPFEVIIADDGSTEETKELIEEFKSQFPIPIKHV--WQEDEGFRKAKIrnKAI 75

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 966966000 107 KHATGNYIIIMDADLSHHPKFIPEFIRKQKEGNFdiVSGTRYK 149
Cdd:cd06420   76 AAAKGDYLIFIDGDCIPHPDFIADHIELAEPGVF--LSGSRVL 116
GT_2_like_d cd04196
Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse ...
 28-120 1.32e-09

Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.


Pssm-ID: 133039 [Multi-domain]  Cd Length: 214  Bit Score: 56.48  E-value: 1.32e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000  28 SVLLPTYN-ERenlplivWLL--VKS-FSESGINYEIIIIDDGSPDGTRDVAEQLEKIYGSDRILLKPrEKKLGLGTAYI 103
Cdd:cd04196    1 AVLMATYNgEK-------YLReqLDSiLAQTYKNDELIISDDGSTDGTVEIIKEYIDKDPFIIILIRN-GKNLGVARNFE 72

                         90
                 ....*....|....*..
gi 966966000 104 HGMKHATGNYIIIMDAD 120
Cdd:cd04196   73 SLLQAADGDYVFFCDQD 89
Glyco_tranf_2_3 pfam13641
Glycosyltransferase like family 2; Members of this family of prokaryotic proteins include ...
 25-239 2.04e-09

Glycosyltransferase like family 2; Members of this family of prokaryotic proteins include putative glucosyltransferase, which are involved in bacterial capsule biosynthesis.


Pssm-ID: 433372 [Multi-domain]  Cd Length: 230  Bit Score: 56.23  E-value: 2.04e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000   25 DKYSVLLPTYNERENL-PLIVWLLVKSFsesgINYEIIIIDDGSPDGTRDVAEQLEKIYGSDRILLKPREKKLGLG---T 100
Cdd:pfam13641   2 PDVSVVVPAFNEDSVLgRVLEAILAQPY----PPVEVVVVVNPSDAETLDVAEEIAARFPDVRLRVIRNARLLGPTgksR 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000  101 AYIHGMKHATGNYIIIMDADLSHHPKFIPEFIRKQKEGNFDIVSGTRYKGNGGVYgWDL--KRKIISRGANFLtQILLRP 178
Cdd:pfam13641  78 GLNHGFRAVKSDLVVLHDDDSVLHPGTLKKYVQYFDSPKVGAVGTPVFSLNRSTM-LSAlgALEFALRHLRMM-SLRLAL 155

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 966966000  179 GASDLTGSFRLYRKEVLeKLIEKCVSKGYVFQ-MEMIVRARQLNYTIGEVPISFVDRVYGES 239
Cdd:pfam13641 156 GVLPLSGAGSAIRREVL-KELGLFDPFFLLGDdKSLGRRLRRHGWRVAYAPDAAVRTVFPTY 216
PRK10073 PRK10073
putative glycosyl transferase; Provisional
 26-142 4.06e-08

putative glycosyl transferase; Provisional


Pssm-ID: 182223 [Multi-domain]  Cd Length: 328  Bit Score: 53.13  E-value: 4.06e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000  26 KYSVLLPTYNERENLPlivwllvkSFSESGI-----NYEIIIIDDGSPDGTRDVAEQLEKIYGSDRILlkpREKKLGLGT 100
Cdd:PRK10073   7 KLSIIIPLYNAGKDFR--------AFMESLIaqtwtALEIIIVNDGSTDNSVEIAKHYAENYPHVRLL---HQANAGVSV 75

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 966966000 101 AYIHGMKHATGNYIIIMDADLSHHPKFIPEFIRKQKEGNFDI 142
Cdd:PRK10073  76 ARNTGLAVATGKYVAFPDADDVVYPTMYETLMTMALEDDLDV 117
CESA_like_1 cd06439
CESA_like_1 is a member of the cellulose synthase (CESA) superfamily; This is a subfamily of ...
 12-120 1.89e-07

CESA_like_1 is a member of the cellulose synthase (CESA) superfamily; This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.


Pssm-ID: 133061 [Multi-domain]  Cd Length: 251  Bit Score: 50.66  E-value: 1.89e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000  12 MSRRQLEVRSPRRDKY----SVLLPTYNEREnlplivWLLVKSFSESGINY-----EIIIIDDGSPDGTRDVAEQlekiY 82
Cdd:cd06439   12 LARLRPKPPSLPDPAYlptvTIIIPAYNEEA------VIEAKLENLLALDYprdrlEIIVVSDGSTDGTAEIARE----Y 81

                         90       100       110
                 ....*....|....*....|....*....|....*...
gi 966966000  83 GSDRILLKPREKKLGLGTAYIHGMKHATGNYIIIMDAD 120
Cdd:cd06439   82 ADKGVKLLRFPERRGKAAALNRALALATGEIVVFTDAN 119
GT_2_like_c cd04186
Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse ...
 29-228 2.36e-07

Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.


Pssm-ID: 133029 [Multi-domain]  Cd Length: 166  Bit Score: 49.48  E-value: 2.36e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000  29 VLLPTYNERENLPLivwlLVKSF-SESGINYEIIIIDDGSPDGTRDVAEQLEKiygsdRILLKPREKKLGLGTAYIHGMK 107
Cdd:cd04186    1 IIIVNYNSLEYLKA----CLDSLlAQTYPDFEVIVVDNASTDGSVELLRELFP-----EVRLIRNGENLGFGAGNNQGIR 71

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000 108 HATGNYIIIMDADLSHHPKFIPEFIRKQkegnfdivsgtRYKGNGGVYGwdlkrkiisrganfltqillrpgaSDLTGSF 187
Cdd:cd04186   72 EAKGDYVLLLNPDTVVEPGALLELLDAA-----------EQDPDVGIVG------------------------PKVSGAF 116

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*....
gi 966966000 188 RLYRKEVLEKLiekcvskGY---VFQM-----EMIVRARQLNYTIGEVP 228
Cdd:cd04186  117 LLVRREVFEEV-------GGfdeDFFLyyedvDLCLRARLAGYRVLYVP 158
Beta4Glucosyltransferase cd02511
UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of ...
 28-120 2.92e-07

UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide; UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.


Pssm-ID: 133005 [Multi-domain]  Cd Length: 229  Bit Score: 49.98  E-value: 2.92e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000  28 SVLLPTYNERENLP--LIVwllVKSFSEsginyEIIIIDDGSPDGTRDVAEQL-EKIYgsdrillkpREKKLGLGTAYIH 104
Cdd:cd02511    3 SVVIITKNEERNIErcLES---VKWAVD-----EIIVVDSGSTDRTVEIAKEYgAKVY---------QRWWDGFGAQRNF 65

                         90
                 ....*....|....*.
gi 966966000 105 GMKHATGNYIIIMDAD 120
Cdd:cd02511   66 ALELATNDWVLSLDAD 81
GT_2_like_a cd02522
GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function; ...
 27-120 7.14e-07

GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function; Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.


Pssm-ID: 133013 [Multi-domain]  Cd Length: 221  Bit Score: 48.72  E-value: 7.14e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000  27 YSVLLPTYNERENLPLivwlLVKSFSE-SGINYEIIIIDDGSPDGTRDVAEQLEKiygsdRILLKPRekklGLGTAYIHG 105
Cdd:cd02522    1 LSIIIPTLNEAENLPR----LLASLRRlNPLPLEIIVVDGGSTDGTVAIARSAGV-----VVISSPK----GRARQMNAG 67

                         90
                 ....*....|....*
gi 966966000 106 MKHATGNYIIIMDAD 120
Cdd:cd02522   68 AAAARGDWLLFLHAD 82
GT_2_WfgS_like cd06433
WfgS and WfeV are involved in O-antigen biosynthesis; Escherichia coli WfgS and Shigella ...
 28-240 1.29e-06

WfgS and WfeV are involved in O-antigen biosynthesis; Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.


Pssm-ID: 133055 [Multi-domain]  Cd Length: 202  Bit Score: 47.54  E-value: 1.29e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000  28 SVLLPTYNERENLPLivwlLVKS-FSESGINYEIIIIDDGSPDGTRDVAEQLEkiygsDRILLKPREKKLGLGTAYIHGM 106
Cdd:cd06433    1 SIITPTYNQAETLEE----TIDSvLSQTYPNIEYIVIDGGSTDGTVDIIKKYE-----DKITYWISEPDKGIYDAMNKGI 71

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000 107 KHATGNYIIIMDADLSHHPKFIPEFIRK-QKEGNFDIVSgtrykGNGGVYGWDLKRKIISRGANFLTQILLR------PG 179
Cdd:cd06433   72 ALATGDIIGFLNSDDTLLPGALLAVVAAfAEHPEVDVVY-----GDVLLVDENGRVIGRRRPPPFLDKFLLYgmpichQA 146

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 966966000 180 AsdltgsfrLYRKEVLEKLieKCVSKGYVFQM--EMIVRARQLNYTIGEVPISFVD-RVYGESK 240
Cdd:cd06433  147 T--------FFRRSLFEKY--GGFDESYRIAAdyDLLLRLLLAGKIFKYLPEVLAAfRLGGVSS 200
GT2_RfbC_Mx_like cd04184
Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis; The rfbC gene ...
 28-120 1.92e-06

Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis; The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.


Pssm-ID: 133027 [Multi-domain]  Cd Length: 202  Bit Score: 47.20  E-value: 1.92e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000  28 SVLLPTYNerenlPLIVWL--LVKSF-SESGINYEIIIIDDGSPDgtRDVAEQLEKIYGSD-RILLKPREKKLGLGTAYI 103
Cdd:cd04184    4 SIVMPVYN-----TPEKYLreAIESVrAQTYPNWELCIADDASTD--PEVKRVLKKYAAQDpRIKVVFREENGGISAATN 76

                         90
                 ....*....|....*..
gi 966966000 104 HGMKHATGNYIIIMDAD 120
Cdd:cd04184   77 SALELATGEFVALLDHD 93
CESA_CaSu_A2 cd06437
Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit ...
 28-134 2.56e-06

Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex; Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants were significantly smaller, while the single mutant plants were almost normal.


Pssm-ID: 133059 [Multi-domain]  Cd Length: 232  Bit Score: 47.31  E-value: 2.56e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000  28 SVLLPTYNEREnlplIVWLLVKSFSEsgINY-----EIIIIDDGSPDGTRDVAEQLEKIYGSD-RILLKPREKKLGL-GT 100
Cdd:cd06437    4 TVQLPVFNEKY----VVERLIEAACA--LDYpkdrlEIQVLDDSTDETVRLAREIVEEYAAQGvNIKHVRRADRTGYkAG 77

                         90       100       110
                 ....*....|....*....|....*....|....
gi 966966000 101 AYIHGMKHATGNYIIIMDADLShhPKfiPEFIRK 134
Cdd:cd06437   78 ALAEGMKVAKGEYVAIFDADFV--PP--PDFLQK 107
CESA_CelA_like cd06421
CESA_CelA_like are involved in the elongation of the glucan chain of cellulose; Family of ...
 29-198 3.60e-06

CESA_CelA_like are involved in the elongation of the glucan chain of cellulose; Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.


Pssm-ID: 133043 [Multi-domain]  Cd Length: 234  Bit Score: 46.80  E-value: 3.60e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000  29 VLLPTYNERENLPLIVWLLVKsfsesGINY-----EIIIIDDGSPDGTRDVAEQLEKIYGSDRIL-LKPREKKLGlgtAY 102
Cdd:cd06421    5 VFIPTYNEPLEIVRKTLRAAL-----AIDYphdklRVYVLDDGRRPELRALAAELGVEYGYRYLTrPDNRHAKAG---NL 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000 103 IHGMKHATGNYIIIMDADLSHHPKF----IPEFIRKQKEG---------NFDIVSGTrykGNGGVYGWDLKRKIISRGAN 169
Cdd:cd06421   77 NNALAHTTGDFVAILDADHVPTPDFlrrtLGYFLDDPKVAlvqtpqffyNPDPFDWL---ADGAPNEQELFYGVIQPGRD 153

                        170       180
                 ....*....|....*....|....*....
gi 966966000 170 FLtqillrpGASDLTGSFRLYRKEVLEKL 198
Cdd:cd06421  154 RW-------GAAFCCGSGAVVRREALDEI 175
GT2_AmsE_like cd04195
GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis; AmsE is a ...
 28-146 7.48e-06

GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis; AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.


Pssm-ID: 133038 [Multi-domain]  Cd Length: 201  Bit Score: 45.38  E-value: 7.48e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000  28 SVLLPTYNeRENLPLIVWLLVKSFSESGINYEIIIIDDGS-PDGTRDVAEQLEKIYGSDRILLkprEKKLGLGTAYIHGM 106
Cdd:cd04195    1 SVLMSVYI-KEKPEFLREALESILKQTLPPDEVVLVKDGPvTQSLNEVLEEFKRKLPLKVVPL---EKNRGLGKALNEGL 76

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 966966000 107 KHATGNYIIIMDADLSHHP----KFIPEFirkQKEGNFDIVSGT 146
Cdd:cd04195   77 KHCTYDWVARMDTDDISLPdrfeKQLDFI---EKNPEIDIVGGG 117
PRK13915 PRK13915
putative glucosyl-3-phosphoglycerate synthase; Provisional
 10-129 2.02e-05

putative glucosyl-3-phosphoglycerate synthase; Provisional


Pssm-ID: 237556 [Multi-domain]  Cd Length: 306  Bit Score: 44.91  E-value: 2.02e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000  10 PPMSRRQLEVRSPRRDKY--------------SVLLPTYNERENLPLIVWLLVKSFSESGINyEIIIIDDGSPDGTRDVA 75
Cdd:PRK13915   2 LPAVEAWLEDRTWHAPDWtieelvaakagrtvSVVLPALNEEETVGKVVDSIRPLLMEPLVD-ELIVIDSGSTDATAERA 80

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 966966000  76 EQL-EKIYGSDRIL--LKPREKKlglGTAYIHGMKHATGNYIIIMDADL-SHHPKFIP 129
Cdd:PRK13915  81 AAAgARVVSREEILpeLPPRPGK---GEALWRSLAATTGDIVVFVDADLiNFDPMFVP 135
GT_2_like_b cd04185
Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse ...
 59-166 3.06e-05

Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.


Pssm-ID: 133028 [Multi-domain]  Cd Length: 202  Bit Score: 43.78  E-value: 3.06e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000  59 EIIIIDDGSPDGTRDVaeqLEKIYGSDRILLKPREKKLGlGTAYIH-GMKHA--TG-NYIIIMDADLSHHPKFIPEFIRK 134
Cdd:cd04185   28 HIIVIDNASTDGTAEW---LTSLGDLDNIVYLRLPENLG-GAGGFYeGVRRAyeLGyDWIWLMDDDAIPDPDALEKLLAY 103

                         90       100       110
                 ....*....|....*....|....*....|..
gi 966966000 135 QKEGNFDIVSGTRYKGNGGVYGWDLKRKIISR 166
Cdd:cd04185  104 ADKDNPQFLAPLVLDPDGSFVGVLISRRVVEK 135
Glyco_tranf_2_2 pfam10111
Glycosyltransferase like family 2; Members of this family of prokaryotic proteins include ...
 28-120 5.22e-05

Glycosyltransferase like family 2; Members of this family of prokaryotic proteins include putative glucosyltransferase, which are involved in bacterial capsule biosynthesis.


Pssm-ID: 313356 [Multi-domain]  Cd Length: 276  Bit Score: 43.42  E-value: 5.22e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000   28 SVLLPTYNERENLPLIVWLLVKSFsESGINYEIIIIDDGSPDgtrDVAEQLEKIYGSDRILLKPRE--KKLGLGTAYIHG 105
Cdd:pfam10111   1 SVVIPVYNGEKTHWIQERILNQTF-QYDPEFELIIINDGSTD---KTLEEVSSIKDHNLQVYYPNApdTTYSLAASRNRG 76

                          90
                  ....*....|....*
gi 966966000  106 MKHATGNYIIIMDAD 120
Cdd:pfam10111  77 TSHAIGEYISFIDGD 91
GT2_RfbF_like cd02526
RfbF is a putative dTDP-rhamnosyl transferase; Shigella flexneri RfbF protein is a putative ...
 59-228 6.84e-04

RfbF is a putative dTDP-rhamnosyl transferase; Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.


Pssm-ID: 133017 [Multi-domain]  Cd Length: 237  Bit Score: 39.96  E-value: 6.84e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000  59 EIIIIDDGSpdgtrDVAEQLEKIYGSDRILLKPREKKLGLGTAYIHGMKHATGN---YIIIMDADLSHHPKFIPEFI--R 133
Cdd:cd02526   26 KVVVVDNSS-----GNDIELRLRLNSEKIELIHLGENLGIAKALNIGIKAALENgadYVLLFDQDSVPPPDMVEKLLayK 100

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966966000 134 KQKEGN----------FDIVSGTRYKGNGGVYGWDLKRKIISRGANFLTQILlrpgASdltGSfrLYRKEVLEKLIEKCV 203
Cdd:cd02526  101 ILSDKNsnigavgpriIDRRTGENSPGVRKSGYKLRIQKEGEEGLKEVDFLI----TS---GS--LISLEALEKVGGFDE 171

                        170       180
                 ....*....|....*....|....*....
gi 966966000 204 SkgyVF----QMEMIVRARQLNYTIGEVP 228
Cdd:cd02526  172 D---LFidyvDTEWCLRARSKGYKIYVVP 197
pp-GalNAc-T cd02510
pp-GalNAc-T initiates the formation of mucin-type O-linked glycans; UDP-GalNAc: polypeptide ...
 59-119 1.18e-03

pp-GalNAc-T initiates the formation of mucin-type O-linked glycans; UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.


Pssm-ID: 133004 [Multi-domain]  Cd Length: 299  Bit Score: 39.49  E-value: 1.18e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 966966000  59 EIIIIDDGSpdgTRDVAEQLEKIYGSdRILLKPR----EKKLGLGTAYIHGMKHATGNYIIIMDA 119
Cdd:cd02510   32 EIILVDDFS---DKPELKLLLEEYYK-KYLPKVKvlrlKKREGLIRARIAGARAATGDVLVFLDS 92
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH