|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-459 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 705.95 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 1 MLMILIPTLMLVPTTWLTPPKWLWPTTLGHSLIIALASLTWLESLSETGWTSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 81 SQNHTALEPINRQRMYITLLTSLQFFLILAFSATEIIMFYIMFEATLIPTLVIITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 161 LLVALLLLQNSTGTLSLLTLQYSAPLQLASFADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 241 GYGMMRMMIMLEPLTKELSYPFIIFALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 321 GLTSSALFCLANTNYERTHSRTMVLARGLQMVLPLMTTWWFIASLANLALPPLPNLMGELMILTSLFNWSHWTLALTGAG 400
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 40804674 401 TLITAGYSLYMFLMTQRGPLPAHIIALDPSHTREHLLIALHLLPLILLILKPELIWGWT 459
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWGWT 459
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 670.86 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 1 MLMILIPTLMLVPTTWLTPPKWLWPTTLGHSLIIALASLTWLESLSETgWTSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSET-MNFTNKYFGIDQISSPLLILTCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 81 SQNHTALEPINRQRMYITLLTSLQFFLILAFSATEIIMFYIMFEATLIPTLVIITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00068 80 SQNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 161 LLVALLLLQNSTGTLSLLTLQYSAPLQLASFADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00068 160 LLIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 241 GYGMMRMMIMLEPLTKELSYPFIIFALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
Cdd:MTH00068 240 GYGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 321 GLTSSALFCLANTNYERTHSRTMVLARGLQMVLPLMTTWWFIASLANLALPPLPNLMGELMILTSLFNWSHWTLALTGAG 400
Cdd:MTH00068 320 GLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLG 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 40804674 401 TLITAGYSLYMFLMTQRGPLPAHIIALDPSHTREHLLIALHLLPLILLILKPELIWGW 458
Cdd:MTH00068 400 TLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISGM 457
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 646.87 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 1 MLMILIPTLMLVPTTWLTPPKWLWPTTLGHSLIIALASLTWLESLSETGwTSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPT-KNLTQWLGIDQISAPLLVLSCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 81 SQNHTALEPINRQRMYITLLTSLQFFLILAFSATEIIMFYIMFEATLIPTLVIITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00124 80 SQNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 161 LLVALLLLQNSTGTLSLLTLQYSAPLQLASFADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00124 160 LLIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 241 GYGMMRMMIMLEPLTKELSYPFIIFALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
Cdd:MTH00124 240 GYGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 321 GLTSSALFCLANTNYERTHSRTMVLARGLQMVLPLMTTWWFIASLANLALPPLPNLMGELMILTSLFNWSHWTLALTGAG 400
Cdd:MTH00124 320 GLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLA 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 40804674 401 TLITAGYSLYMFLMTQRGPLPAHIIALDPSHTREHLLIALHLLPLILLILKPELIWGW 458
Cdd:MTH00124 400 TLITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISGT 457
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-459 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 631.16 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 1 MLMILIPTLMLVPTTWLTPPKWLWPTTLGHSLIIALASLTWLESLSETGWtSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSL-NFSLLFFSDSLSTPLLILTTWLLPLMLMA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 81 SQNHTALEPINRQRMYITLLTSLQFFLILAFSATEIIMFYIMFEATLIPTLVIITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00110 80 SQHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 161 LLVALLLLQNSTGTLSLLTLQYSAPLQLASFADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00110 160 LLVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 241 GYGMMRMMIMLEPLTKELSYPFIIFALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
Cdd:MTH00110 240 GYGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 321 GLTSSALFCLANTNYERTHSRTMVLARGLQMVLPLMTTWWFIASLANLALPPLPNLMGELMILTSLFNWSHWTLALTGAG 400
Cdd:MTH00110 320 GLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLN 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 40804674 401 TLITAGYSLYMFLMTQRGPLPAHIIALDPSHTREHLLIALHLLPLILLILKPELIWGWT 459
Cdd:MTH00110 400 MLITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGPT 458
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-455 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 544.15 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 3 MILIPTLMLVPTTWLTPPKWLWPTTLGHSLIIALASLTWLESLSETGWTSLNLYMATDPLSTPLLVLTCWLLPLMILASQ 82
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 83 NHTALEPINRQRMYITLLTSLQFFLILAFSATEIIMFYIMFEATLIPTLVIITRWGNQTERLNAGTYFLFYTLAGSLPLL 162
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 163 VALLLLQNSTGTLSLLTLQYSaplQLASFADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGY 242
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYFS---KLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 243 GMMRMMIMLEPLTKELSYPFIIFALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGL 322
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 323 TSSALFCLANTNYERTHSRTMVLARGLQMVLPLMTTWWFIASLANLALPPLPNLMGELMILTSLFNWSHWTLALTGAGTL 402
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 40804674 403 ITAGYSLYMFLMTQRGPLPAHIIALDPSHTREHLLIALHLLPLILLILKPELI 455
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-435 |
8.28e-170 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 485.25 E-value: 8.28e-170
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 1 MLMILIPTLMLVPTTWLTPPKWLWPTTLGHSLIIALASLTWLESLSETGWTSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 81 SQNHTALEPINRQRMYITLLTSLQFFLILAFSATEIIMFYIMFEATLIPTLVIITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 161 LLVALLLLQNSTGTLSLLTLQYSAPLQLASFADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 241 GYGMMRMM-IMLEPLTKELSYPFIIFALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIA 319
Cdd:MTH00044 241 GYGLIRLInLFSLPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 320 HGLTSSALFCLANTNYERTHSRTMVLARGLQMVLPLMTTWWFIASLANLALPPLPNLMGELMILTSLFNWSHWTLALTGA 399
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430
....*....|....*....|....*....|....*.
gi 40804674 400 GTLITAGYSLYMFLMTQRGPLPAHIIALDPSHTREH 435
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREH 436
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
49-458 |
9.54e-124 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 366.47 E-value: 9.54e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 49 GWTSLNLYMATDPLSTPLLVLTCWLLPLMILASQNhtALEPINRQRMYITLLTSLQFFLILAFSATEIIMFYIMFEATLI 128
Cdd:MTH00150 12 SYESLSELFSVDSMSSLLISLSLWISGLMMLASQK--SVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLI 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 129 PTLVIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSLLtlqYSAPLQLASFADKLWWAGCLLAFLVKM 208
Cdd:MTH00150 90 PTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFML---LISSLRKLLSSMGLWGLLVFLAFLVKL 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 209 PLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMIMLEPLTKELSYPFIIFALWGVIMTGSICLRQTDLKSLIA 288
Cdd:MTH00150 167 PMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIA 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 289 YSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQMVLPLMTTWWFIASLANL 368
Cdd:MTH00150 247 YSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINM 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 369 ALPPLPNLMGELMILTSLFNWSHWTLALTGAGTLITAGYSLYMFLMTQRGPLPAHIIALDPSHTREHLLIALHLLPLILL 448
Cdd:MTH00150 327 AAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLL 406
|
410
....*....|
gi 40804674 449 ILKPELIWGW 458
Cdd:MTH00150 407 ILKSDLLFMW 416
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-418 |
1.50e-122 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 364.09 E-value: 1.50e-122
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 1 MLMILIPTLMLVPTTWLTPPKWLwpttlGHSLIIALASLTWLESLSETGWTSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWL-----VQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILS 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 81 SQNHTALepINRQRMYITLLTSLQFFLILAFSATEIIMFYIMFEATLIPTLVIITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00163 76 SESVYKK--NNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLP 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 161 LLVALLLLQNSTGTLSLLTLQYSaplqlaSFADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00163 154 LLVGIFYLYNNSGSLSFFLLNFF------GSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLG 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 241 GYGMMRMMIMLEPLTKELSYPFIIFALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
Cdd:MTH00163 228 GYGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGH 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 321 GLTSSALFCLANTNYERTHSRTMVLARGLQMVLPLMTTWWFIASLANLALPPLPNLMGELMILTSLFNWSHWTLALTGAG 400
Cdd:MTH00163 308 GLCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLL 387
|
410
....*....|....*...
gi 40804674 401 TLITAGYSLYMFLMTQRG 418
Cdd:MTH00163 388 SFFSAAYSLYLYSYSQHG 405
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-458 |
6.16e-114 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 342.49 E-value: 6.16e-114
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 1 MLMILIPTLMLVPTTwLTPPKWLWPTTLGHSLIIALASLTWLESLSeTGWTSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00014 1 MLKLIMPLISLLLLP-LIKYPWSWALTFSTLLLLSLFTLLNLYPMS-APYSMFTESLSSDMLSAPLITLTLWITALMILA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 81 SQNHTALEpiNRQRMYITLLTSLQFFLILAFSATEIIMFYIMFEATLIPTLVIITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00014 79 SFKIFQNN--KAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLP 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 161 LLVALLLLQNSTGTLSLLTLQYSAPLQLASfadKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00014 157 LLMSILLIFYTNNSLSMLMSSMEPPSIYLM---NLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLG 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 241 GYGMMRMMIMLEPLTKELSYPFIIFALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
Cdd:MTH00014 234 GYGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAH 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 321 GLTSSALFCLANTNYERTHSRTMVLARGLQMVLPLMTTWWFIASLANLALPPLPNLMGELMILTSLFNWSHWTLALTGAG 400
Cdd:MTH00014 314 GLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAIT 393
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 40804674 401 TLITAGYSLYMFLMTQRGPLPAHIIALDPSHTREHLLIALHLLPLILLILKPELIWGW 458
Cdd:MTH00014 394 SFLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLITNW 451
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
60-418 |
6.19e-108 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 326.94 E-value: 6.19e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 60 DPLSTPLLVLTCWLLPLMILASqnHTALEPINRQRMYITLLTSLQFFLILAFSATEIIMFYIMFEATLIPTLVIITRWGN 139
Cdd:MTH00205 56 DSLSLPLIMLSFWISLLMVLAS--YKVFKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGY 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 140 QTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSLLtlqYSAPLQLASFADKLWWAGCLLAFLVKMPLYGVHLWLPK 219
Cdd:MTH00205 134 QPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMF---FNFPLNFSDFYLFLYWIFLMLAFLVKLPMYFVHLWLPK 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 220 AHVEAPIAGSMVLAAVLLKLGGYGMMRMMIMLEPLTKELSYPFIIFALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVA 299
Cdd:MTH00205 211 AHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMV 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 300 GGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQMVLPLMTTWWFIASLANLALPPLPNLMGE 379
Cdd:MTH00205 291 VGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASE 370
|
330 340 350
....*....|....*....|....*....|....*....
gi 40804674 380 LMILTSLFNWSHWTLALTGAGTLITAGYSLYMFLMTQRG 418
Cdd:MTH00205 371 ILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHG 409
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
2-434 |
1.49e-86 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 273.11 E-value: 1.49e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 2 LMILIP-----TLMLVPTTWLTPPKWLWPTTLGHSLIIALA----------------SLTWLESLSetgwtsLNLYMATD 60
Cdd:COG1008 8 LLILLPllgalLLLLLPRRNARLARWVALAVSLLTLLLSLYllagfdpgtggfqfveSYPWIPSLG------ISYHLGVD 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 61 PLSTPLLVLTCWLLPLMILASQNhtalEPINRQRMYITLLTSLQFFLILAFSATEIIMFYIMFEATLIPTLVIITRWGNQ 140
Cdd:COG1008 82 GISLPLVLLTALLTPLAILASWN----EIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGGE 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 141 tERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLS-----LLTLQYSAPLQLasfadkLWWAGCLLAFLVKMPLYGVHL 215
Cdd:COG1008 158 -RRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTfdiaeLAAAPLPLTAQL------LLFLAFFIAFAVKVPMFPFHT 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 216 WLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMIMLEPL-TKELSYPFIIFALWGVIMTGSICLRQTDLKSLIAYSSVSH 294
Cdd:COG1008 231 WLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSH 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 295 MGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQMVLPLMTTWWFIASLANLALPPLP 374
Cdd:COG1008 311 MGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTS 390
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 375 NLMGELMILTSLFNWSHWTLALTGAGTLITAGYSLYMFLMTQRGPLPAHIIALDPSHTRE 434
Cdd:COG1008 391 GFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRE 450
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
38-434 |
2.21e-80 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 257.44 E-value: 2.21e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 38 SLTWLESLSetgwtsLNLYMATDPLSTPLLVLTCWLLPLMILASQNhtalEPINRQRMYITLLTSLQFFLILAFSATEII 117
Cdd:PRK05846 65 KHPWIPRFG------ISYHLGVDGISLLLVVLTALLTPLAVLASWE----EIKKRVKFYMAALLWLEGGVIGVFAALDLL 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 118 MFYIMFEATLIPTLVIITRWGnQTERLNAGTYFLFYTLAGSLPL----LVALLLLQNSTGTLSLLTLQYsapLQLASFAD 193
Cdd:PRK05846 135 LFYVFFEAMLIPMYFLIGVWG-GKNRIYAATKFFLYTLLGSLLMlvaiIYLVVVYYNATGTFDIADLLN---LPLPPGVQ 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 194 KLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMIMLEPL-TKELSYPFIIFALWGVIM 272
Cdd:PRK05846 211 YWLFLAFFIAFAVKMPMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDaSHEFAPIIITLGVIAIIY 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 273 TGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQMV 352
Cdd:PRK05846 291 GALVALAQTDIKKLIAYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKV 370
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 353 LPLMTTWWFIASLANLALPPLPNLMGELMILTSLFNWSHWTLALTGAGTLITAGYSLYMFLMTQRGPLPAHIIALDPSHT 432
Cdd:PRK05846 371 MPVLAAFFLFFAMASLGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKDLNG 450
|
..
gi 40804674 433 RE 434
Cdd:PRK05846 451 RE 452
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
53-426 |
9.28e-78 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 250.24 E-value: 9.28e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 53 LNLYMATDPLSTPLLVLTCWLLPLMILASQNhtalEPINRQRMYITLLTSLQFFLILAFSATEIIMFYIMFEATLIPTLV 132
Cdd:TIGR01972 69 ISYHLGVDGISLLLVLLTALLTLLAILASWE----SIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYL 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 133 IITRWGNQTeRLNAGTYFLFYTLAGSLPLLVALLLLQNSTG-TLSLLTLqysAPLQLASFADKLWWAGCLLAFLVKMPLY 211
Cdd:TIGR01972 145 LIGVWGGPN-RIYAAMKFFLYTLAGSLLMLLAILGLYFLGGgTFDLLEL---LNLPLPFGVQTWLFLAFFIAFAVKVPLF 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 212 GVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMIMLEP-LTKELSYPFIIFALWGVIMTGSICLRQTDLKSLIAYS 290
Cdd:TIGR01972 221 PLHTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPdASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYS 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 291 SVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQMVLPLMTTWWFIASLANLAL 370
Cdd:TIGR01972 301 SISHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGL 380
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 40804674 371 PPLPNLMGELMILTSLFNWSHWTLALTGAGTLITAGYSLYMFLMTQRGPLPAHIIA 426
Cdd:TIGR01972 381 PGTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNPEVA 436
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
54-412 |
1.58e-74 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 241.89 E-value: 1.58e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 54 NLYMATDPLSTPLLVLTCWLLPLMILASQNHTALepinRQRMYITLLTSLQFFLILAFSATEIIMFYIMFEATLIPTLVI 133
Cdd:MTH00204 76 PLVFAVDGVSLFFILLTTLLIPICILISWKSIKF----LFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLL 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 134 ITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSLLTLqysAPLQLASFADKLWWAGCLLAFLVKMPLYGV 213
Cdd:MTH00204 152 IGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQIL---LNIKLPLSIQKWLLVGFFLSLAVKIPQIPF 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 214 HLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMIMLEPLTKELSYPFII-FALWGVIMTGSICLRQTDLKSLIAYSSV 292
Cdd:MTH00204 229 HIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVmLSVIAVIYGSLTTCRQVDFKRLIAYSSV 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 293 SHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQMVLPLMTTWWFIASLANLALPP 372
Cdd:MTH00204 309 AHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPL 388
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 40804674 373 LPNLMGELMILTSLFNWSHWTLALTGAGTLITAGYSLYMF 412
Cdd:MTH00204 389 SCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLY 428
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
17-412 |
1.60e-69 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 228.78 E-value: 1.60e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 17 LTPPKWLWPTTLGHSLIIALASLTWLESLsETGWTSLNLymATDPLSTPLLVLTCWLLPLMILASQNHTALepinRQRMY 96
Cdd:MTH00217 39 LTATILLWASFDGEGQFQAIKKFEWIPGI-EPVFGPVVF--AVDGISIFFLILTALLTPICILISWNSIKF----LIKEF 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 97 ITLLTSLQFFLILAFSATEIIMFYIMFEATLIPTLVIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLS 176
Cdd:MTH00217 112 LLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTD 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 177 LLTLqysAPLQLASFADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMIMLEPLTK 256
Cdd:MTH00217 192 YQAL---CCLKIEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEAS 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 257 ELSYPFI-IFALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNY 335
Cdd:MTH00217 269 EYFSPLIqTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLY 348
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 40804674 336 ERTHSRTMVLARGLQMVLPLMTTWWFIASLANLALPPLPNLMGELMILTSLFNWSHWTLALTGAGTLITAGYSLYMF 412
Cdd:MTH00217 349 ERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLY 425
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
113-401 |
5.05e-67 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 216.41 E-value: 5.05e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 113 ATEIIMFYIMFEATLIPTLVIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSLLTLQYSAPLQLASFA 192
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 193 DKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMIMLEPLTKELSYPFIIFALWGVIM 272
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 273 TGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLA-NTNYERTHSRTMVLARGLQM 351
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 40804674 352 VLPLMTTWWFIASLANLALPPLPNLMGELMILTSLFNWSHWTLALTGAGT 401
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
55-410 |
6.97e-65 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 217.10 E-value: 6.97e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 55 LYMATDPLSTPLLVLTCWLLPLMILASQNHTALepinRQRMYITLLTSLQFFLILAFSATEIIMFYIMFEATLIPTLVII 134
Cdd:MTH00226 96 LVFAVDGISIYFIILTGFIVPCSILISWHSVKY----LTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLIL 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 135 TRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSLLTLQYSAPLqLASFADKLWWAGCLLAFLVKMPLYGVH 214
Cdd:MTH00226 172 GIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASCSHV-VSEQTQKWIFLGIFLAMAVKIPIFPFH 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 215 LWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMIMLEPLTKELSYPFII-FALWGVIMTGSICLRQTDLKSLIAYSSVS 293
Cdd:MTH00226 251 IWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLAPAVIaMGIVGIVYGSFATCRQIDVKRLVAYSSVA 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 294 HMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQMVLPLMTTWWFIASLANLALPPL 373
Cdd:MTH00226 331 HMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPS 410
|
330 340 350
....*....|....*....|....*....|....*..
gi 40804674 374 PNLMGELMILTSLFNWSHWTLALTGAGTLITAGYSLY 410
Cdd:MTH00226 411 GNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFY 447
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
53-428 |
6.05e-53 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 185.24 E-value: 6.05e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 53 LNLYMATDPLSTPLLVLTCWLLPLMILASQNHTalepiNRQRMYITLLTSLQFFLILAFSATEIIMFYIMFEATLIPTLV 132
Cdd:PRK12561 51 LEWSLGVDGLSMPLVLLSGLITTLSIFASWKVT-----RKPRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYL 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 133 IITRWGNQtERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSL----LTLQySAPLQLASFAdklwWAGCLLAFLVKM 208
Cdd:PRK12561 126 LISIWGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFdlaeLGAK-SYPLALELLL----YAGFLIAFGVKL 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 209 PLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRM-MIMLEPLTKELSYPFIIFALWGVIMTGSICLRQTDLKSLI 287
Cdd:PRK12561 200 PIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFnVQMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRL 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 288 AYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQMVLPLMTTWWFIASLAN 367
Cdd:PRK12561 280 AYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMAS 359
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 40804674 368 LALPPLPNLMGELMIL---------TSLFNWShwTLALTGAGTLITAGYSLYM----FLMTQRGPLPAHIIALD 428
Cdd:PRK12561 360 LALPGMSGFVSELTVFlgitssdvySSTFRTI--TILLAAVGLILTPIYLLSMlrrvFYGPRSELLPALAVVED 431
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
1-416 |
1.32e-47 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 169.17 E-value: 1.32e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 1 MLMILIPtLMLVPTTWLTP--PKWLWPTTLGHSLIIALASLTWLESLSETGWTSLNL---------YMATDPLSTPLLVL 69
Cdd:COG0651 6 ILPVLLP-LLAAALLLLLGrrRRLQRALSLLASLALLALALALLLQVLAGGPLVYALggwpapfgiVLVADRLSALFLLL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 70 TCWLLPLMILASqnHTALEPINRQRMYITLLTSLQFFLILAFSATEIIMFYIMFEATLIPTLVIITRWGNQtERLNAGTY 149
Cdd:COG0651 85 TALVALAVLLYS--IGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTK-EALRAGLK 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 150 FLFYTLAGSLPLLVALLLLQNSTGTLSLLTLQYSAPlQLASFADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGS 229
Cdd:COG0651 162 YLILNLVGSALFLLGVGLLYGATGTLNMADLAARLA-ELDPGLLLAAFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 230 MVLAAVLLKLGGYGMMRMMIML--EPLTKELSYPFIIFALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTP 307
Cdd:COG0651 241 ALLSGLLTKVGVYAILRVLTLLfgADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTP 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 308 WGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQMVLPLMTTWWFIASLANLALPPLPNLMGELMILTSLF 387
Cdd:COG0651 321 LGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAAL 400
|
410 420 430
....*....|....*....|....*....|
gi 40804674 388 NWSHWTLALTGA-GTLITAGYSLYMFLMTQ 416
Cdd:COG0651 401 EAGAWLLAAVLLlSSLLTLAYFVRIFGRAQ 430
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
99-410 |
8.55e-45 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 161.23 E-value: 8.55e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 99 LLTSLQFFLILAFSATEIIMFYIMFEATLIPTLVIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLllqnstgtLSLL 178
Cdd:MTH00094 67 LSNLLILICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYL--------KNFF 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 179 TLQYSAPLQLASFADKLWwagCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMIMLEPLtkeL 258
Cdd:MTH00094 139 FFSLCYFDFFLSWEMFFI---LSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFV---Y 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 259 SYPFIIFALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERT 338
Cdd:MTH00094 213 NNFWIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHIS 292
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 40804674 339 HSRTMVLARGLQMVLPLMTTWWFIASLANLALPPLPNLMGELMILTSLFNWSHWTLALTGAGTLITAGYSLY 410
Cdd:MTH00094 293 KSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLF 364
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
38-411 |
6.57e-43 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 158.72 E-value: 6.57e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 38 SLTWLESLSetgwtsLNLYMATDPLSTPLLVLTCWLLPLMILASQNhtalepinrqrmyITLLTSLQFFLILA------- 110
Cdd:PRK02546 70 SYSWLPQLG------LTWSVGADGLSMPLILLTGFITTLAVLAAWP-------------VTFKPKLFYFLMLAmyggqia 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 111 -FSATEIIMFYIMFEATLIPTLVIITRWGNQtERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLS-----LLTLQYSA 184
Cdd:PRK02546 131 vFAVQDMLLFFLAWELELIPVYLLLAIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTfdmtaLAAKDFGL 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 185 PLQLasfadkLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMIMLEPLTKELSYP-FI 263
Cdd:PRK02546 210 GFQL------LCYAGLLIAYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPlLI 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 264 IFALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTM 343
Cdd:PRK02546 284 VLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLML 363
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 40804674 344 VLARGLQMVLPLMTTWWFIASLANLALPPLPNLMGELMILTSLFNWSHWTLA-------LTGAGTLITAGYSLYM 411
Cdd:PRK02546 364 DEMGGVGQKMRKMFAMWTACSLASLALPGMSGFVAELMVFVGFATSDAYTLPfrvvvvfLAAVGVILTPIYLLSM 438
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
60-411 |
9.40e-41 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 152.02 E-value: 9.40e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 60 DPLSTPLLVLTCWLLPLMILASQnhtalePINRQrmyitllTSLQFFLILA--------FSATEIIMFYIMFEATLIPTL 131
Cdd:CHL00011 83 DGLSIGPILLTGFITTLATLAAW------PVTRN-------SRLFYFLMLAmysgqiglFSSRDLLLFFIMWELELIPVY 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 132 VIITRWGNQtERLNAGTYFLFYTLAGSLPLLVALLLLQ---NSTGTLSLLTLQY-SAPLQLasfaDKLWWAGCLLAFLVK 207
Cdd:CHL00011 150 LLLSMWGGK-KRLYSATKFILYTAGGSIFLLIGVLGMGlygSNEPTLNFETLANqSYPVAL----EILFYIGFLIAYAVK 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 208 MPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMIMLEPLTKELSYPF-IIFALWGVIMTGSICLRQTDLKSL 286
Cdd:CHL00011 225 LPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWlVIVGAIQIIYAASTSLGQRNLKKR 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 287 IAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERThsRTMVLAR--GLQMVLPLMTTWWFIAS 364
Cdd:CHL00011 305 IAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI--RLVYLDEmgGIAIPMPKIFTMFSSFS 382
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 40804674 365 LANLALPPLPNLMGELM----ILTS---LFNWSHWTLALTGAGTLITAGYSLYM 411
Cdd:CHL00011 383 MASLALPGMSGFVAELIvffgIITSqkyLLMPKILITFVMAIGMILTPIYLLSM 436
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
38-429 |
3.31e-37 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 142.53 E-value: 3.31e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 38 SLTWLESLSetgwtsLNLYMATDPLSTPLLVLTCWLLPLMILASQnhtalEPINRQRMYITLLTSLQFFLILAFSATEII 117
Cdd:PRK06473 62 FIPWIDSLG------LSYHLGVDGLSLPLLVLNSLLTLIAIYSSD-----ESIQRPRFYYSLLLLLNAGVSGAFLAQDLL 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 118 MFYIMFEATLIPTLVIITRWGNQtERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSL-LTLQYSAPLQLASfaDKLW 196
Cdd:PRK06473 131 LFFLFYELELIPLYLLIAIWGGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFdYEPLRSHTLPLST--QLLL 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 197 WAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMIMLEPLTKELSYPFIifALWGVI--MTG 274
Cdd:PRK06473 208 LAPILVGFGIKIPLVPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWL--ATWAVVsvLYG 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 275 SIC-LRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGL---Q 350
Cdd:PRK06473 286 ASCaIAQKDMKKMVAYSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpE 365
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 40804674 351 MVLPLMTTWWFIASLANLALPPLPNLMGELMILTSLFNWSHWTLALTGAGTLITAGYSLYMFLMTQRGPLPAHIIALDP 429
Cdd:PRK06473 366 RGLPITGSLMILGVMASAGIPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSNLPR 444
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-110 |
2.29e-32 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 118.78 E-value: 2.29e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 1 MLMILIPTLMLVPTTWLTPPKWLWPTTLGHSLIIALASLTWLESLSETGWTSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 40804674 81 SQNHTALEPINRQRMYITLLTSLQFFLILA 110
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-407 |
2.07e-26 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 111.51 E-value: 2.07e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 2 LMILIPtLMLVPTTWLTPP----KWLWPTTLGHSLIIALASLTWLESLSETGWTSLNLY-------MATDPLSTPLLVLT 70
Cdd:PRK08375 8 LLVAVP-LLAAALIVLLPKrrrlRWALALLVAALTFALAISLLPQVLDGGVIAYVVGGWppgigieLRADSLSALFLLVT 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 71 CWLLPLMILASQNHTAlepiNRQRMYITLLTSLQFFLILAFSATEIIMFYIMFEATLIPTLVIITRWGNQtERLNAGTYF 150
Cdd:PRK08375 87 SILAIAALLYAIGYGE----HRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDR-RALAAARKY 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 151 LFYTLAGSLPLLVALLLLQNSTGTLSLLTLQYSAPLQLASFADklwWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSM 230
Cdd:PRK08375 162 LIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALAENPTVVTA---FGFVLLALALKAAVFPLHTWLPRAYPAAPPVVTA 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 231 VLAAVLLKLGGYGMMRMMI----MLEPLTKELSYPFIIFALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQT 306
Cdd:PRK08375 239 LLSGLVTKVAVYALIRIYFtvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLT 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 307 PWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQMVLPLMTTWWFIASLANLALPPLPNLMGELMILTSL 386
Cdd:PRK08375 319 PLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGA 398
|
410 420
....*....|....*....|..
gi 40804674 387 FN-WSHWTLALTGAGTLITAGY 407
Cdd:PRK08375 399 VEaGQWLVLAVLLASSLLALLY 420
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
60-396 |
7.05e-26 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 110.06 E-value: 7.05e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 60 DPLSTPLLVLTCWLLPLMILASQNHtaLEPINRQRMYITLLTSLQFFLILAFSATEIIMFYIMFEATLIPTLVIITRWGN 139
Cdd:PRK12667 81 DLLGALLGLLTALVMFLILIYSYWY--LEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRD 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 140 QTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTL-----SLLTLQYSAPLQLASFADKLWWAGCLLA-----FLVKMP 209
Cdd:PRK12667 159 RGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLnmadlSAKIRGLSFPLTGGLAGNPPLALGVALAlalwaFTIKAA 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 210 LYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMM-------IMLEPLTKELSYPFIIFALWGVIMTGSICLRQTD 282
Cdd:PRK12667 239 IFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLytifgisPSLIDFRAALSPILIILGAVSAIIGALMMVVQKD 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 283 LKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQMVLPLMTTWWFI 362
Cdd:PRK12667 319 VKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLI 398
|
330 340 350
....*....|....*....|....*....|....
gi 40804674 363 ASLANLALPPLPNLMGELMILTSLFNWSHWTLAL 396
Cdd:PRK12667 399 GALSLVGIPPLNGFFSKLLLFNALLESGFYLPAL 432
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
53-387 |
9.65e-26 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 109.42 E-value: 9.65e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 53 LNLYMATDPLSTPLLVLTCWLLPLMILASQnhtalEPINRQRMYITLLTSLQFFLILAFSATEIIMFYIMFEATLIPTLV 132
Cdd:PRK07363 71 LSYSLGVDGLSLPLLVLNSLLTWIAIYSIG-----ENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 133 IITRWGNQtERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLS-----LLTLQYSAPLQLasfadkLWWAGCLLAFLVK 207
Cdd:PRK07363 146 LIAIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSfdydaISTQNLSLNTQL------ILLTGLLLGFGIK 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 208 MPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMIMLEPLTKELSYPfiIFALWGVI--MTGS-ICLRQTDLK 284
Cdd:PRK07363 219 IPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAP--GLAIIGTIsvIYGAlSAIAQKDIK 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 285 SLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQMV---LPLMTTWWF 361
Cdd:PRK07363 297 RMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPirgLPLTSALLV 376
|
330 340
....*....|....*....|....*.
gi 40804674 362 IASLANLALPPLPNLMGELMILTSLF 387
Cdd:PRK07363 377 LAGMASAGIPGLVGFVAEFIVFQGSF 402
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
24-396 |
9.74e-26 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 109.63 E-value: 9.74e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 24 WPTTLGHSLIIALASLTWLESLSETGWTSLNLYMATDPLSTPLLVLTCWLLPLMILASQNHTALE------PINRQRMYI 97
Cdd:PRK06458 32 TLNVLGITLTLILALWLVFTVPDAGEIFAAGLWFFIDDLNVFFLALIGVVGFLTSLYSIGYMRHEvehgelSPVTLRLYY 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 98 TLLTSLQFFLILAFSATEIIMFYIMFEATLIPT--LVIITRwgnQTERLNAG-TYFLFYT------LAGSLPLLVALLLL 168
Cdd:PRK06458 112 GMYQLFLFTMLLALTSNNLGLMWVAIEATTLSSalLVGIYR---TRASLEAAwKYIIICSvgvafaLFGTILVYANAATV 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 169 QNSTGTLSLLTLQYSAPLQLASFADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMR-- 246
Cdd:PRK06458 189 MGDGEMAILWTELLKHASLLDPTLMKLAFVFLLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRyy 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 247 MMIMLEPLTKELSYPFIIFALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSA 326
Cdd:PRK06458 269 ILIDAAIGSDFPGRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSA 348
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 327 LFCLANTNYERTHSRTMVLARGLQMVLPLMTTWWFIASLANLALPPLPNLMGELMILTSLFNWSHWTLAL 396
Cdd:PRK06458 349 IFFASGNVLQKYGTRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGLARGPLLIAI 418
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
91-404 |
5.40e-18 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 86.16 E-value: 5.40e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 91 NRQRMYITLLTSLQFFLILAFSATEIIMFYIMFEATLIPTLVIITrWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQN 170
Cdd:PRK07234 91 AKTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQ 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 171 STGTLSLLTLQYSAPLQLASFAdklwwagclLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMIM 250
Cdd:PRK07234 170 ANGTFAFSGLATADPEAFALIA---------LGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALD 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 251 LEPLTKELSYPFIIFALWGVImtgsICLRQTDLKSLIAYSSVSHMGLVAGGILIqtpwgftgALILMIAHGLTSSALFCL 330
Cdd:PRK07234 241 VPGLDLIVRIFGVGTALLGVL----FALLEKDLKRMLAFSTISQLGFILAAPLV--------GGLYALAHGLVKSTLFLC 308
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 40804674 331 ANTNYERTHS--RTMVLARGLQMVLplmttwwFIASLANLALPPLPNLMGELMILTSLFNWSHWTLALTGAGTLIT 404
Cdd:PRK07234 309 AGALPSRNFTelISQMLGIGKWIPL-------TMASFSIAGFPLLAGFVSKVLTLKNLLPWQAIALNLAAVGTAAS 377
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
50-387 |
6.88e-17 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 83.24 E-value: 6.88e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 50 WTSLNLYMATDPLSTPLLVLTCWLLPLMILASQNHTALEPINRQRMYITLLTSLQFF-LILAFSATEIIMFYIMFEATLI 128
Cdd:PRK08667 66 APGLDITFHIDRLAAFFIILIGLVSLCVAIYSLGYNEHMSSNERANLLSALTALFILsMLGVVASANTFSFLFFWEIMAL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 129 PTLVIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSLLTLQYSAPLQLASFAdklwwaGCLLAFLVKM 208
Cdd:PRK08667 146 SSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGILSLVFL------LLFLGFGIKA 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 209 PLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRmmIMLEPLTKELSYPFIIF------ALWGVIMTgsicLRQTD 282
Cdd:PRK08667 220 GIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVR--FLMDVLSPELWWGVLILlagsisALLGVIYA----LKEHD 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 283 LKSLIAYSSVSHMGLVAGGILIQTPWGFTG-----------ALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQM 351
Cdd:PRK08667 294 LKGLLAYSSIENIGIILMGIGLYVIFGVYGldtlallalggALFHSLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVK 373
|
330 340 350
....*....|....*....|....*....|....*.
gi 40804674 352 VLPLMTTWWFIASLANLALPPLPNLMGELMILTSLF 387
Cdd:PRK08667 374 LMPYTSALFLVGAVSIAALPPFNGFASELLLYESFF 409
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
201-414 |
5.65e-16 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 79.80 E-value: 5.65e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 201 LLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMIMLEP--LTKELSYPFIIFALWGVIMTGSICL 278
Cdd:PRK08676 213 FIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQsgAAEQFSNVLIGLGIFSIAVAAFSML 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 279 RQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTnYERTHSRTMVLARGLQMVLPLMTT 358
Cdd:PRK08676 293 SQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGI-LHRQYRSDRFDRIFDVFRLQPVAA 371
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 40804674 359 WWFIA-SLANLALPPLPNLMGELMILTSLFNWSHWTLALTgAGTLITAGYSLYMFLM 414
Cdd:PRK08676 372 WGVILgSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAV-LLLLLLAASSFAIFLL 427
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
111-386 |
9.17e-16 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 79.66 E-value: 9.17e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 111 FSATEIIMFYIMFEATLIPTLVIITrWGNQTERLNAGTYFLFYTLaGSLPLLVALLLLQNSTGTLSLLTLqYSAPLQLAS 190
Cdd:PRK08668 115 FLANDLLTLYIFWEIMTFSSFMMVP-MGKKESRKASLKYFVLSAI-GAYAMLYAIFLIYAKTGTFDFADI-SQGLINDTS 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 191 FADKLWWAGCLLAF-LVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMIMLePLTKELS---------Y 260
Cdd:PRK08668 192 TGFALIVFLFLLAFgVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVL-PGTKLFSefgtyrgvpL 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 261 PFIIFALWG---VIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYER 337
Cdd:PRK08668 271 FNYILAWLGnisIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIYR 350
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 40804674 338 THSRTMVLARGLQMVLPLMTTWWFIASLANLALPPLPNLMGELMILTSL 386
Cdd:PRK08668 351 TGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEAL 399
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
110-409 |
1.50e-14 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 75.76 E-value: 1.50e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 110 AFSATEIIMFYIMFEATLIPTLVIITrWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLS-------LLTLQY 182
Cdd:PRK12663 124 SFLTGDLFNLYVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNmahiamrLNDMGD 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 183 SAPLQLASfadklwwAGCLLAFLVKMPLYGVHlWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMIMLEPLTKELSYPF 262
Cdd:PRK12663 203 TATLTTIA-------LLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPL 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 263 IIFALWGVIMTGSI-CLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSR 341
Cdd:PRK12663 275 LATMAAITMVIGALgALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYR 354
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 40804674 342 TMVLARGLQMVLPLMTTWWFIASLANLALPPLPNLMGELMILTSLFNWSHWTLALTGAGTLITAGYSL 409
Cdd:PRK12663 355 SLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSL 422
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
172-424 |
1.11e-13 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 73.26 E-value: 1.11e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 172 TGTLSLLTLQYSAPLQLASFAdkLWWAGCLLAF--LVK---MPLygvHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMM 245
Cdd:COG1009 189 AGTLNFSELLAAAPTILSSPL--LTLILLLLLLgaFGKsaqFPL---HFWLPDA-MEGPTPVSALLhAATMVKAGVYLLA 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 246 RMMIMLEpLTKELSYPFIIFALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQtpwGFTGALILMIAHGLTSS 325
Cdd:COG1009 263 RLSPLFA-LSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVG---AYVAALFHLLTHAFFKA 338
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 326 ALFCLANTNYERTHSRTMVLARGLQMVLPLMTTWWFIASLANLALPPLPNLMGELMILTSLFNWSHWTLALTGAGTL--- 402
Cdd:COG1009 339 LLFLGAGSVIHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLgaf 418
|
250 260
....*....|....*....|....*.
gi 40804674 403 ITAGYSLYMFLMT----QRGPLPAHI 424
Cdd:COG1009 419 LTAFYSFRLFFLVffgkPRPKTPKHP 444
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-410 |
1.68e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 72.31 E-value: 1.68e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 109 LAFSATEIIMFYIMFEATLIPTLVIITRwGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSLLTLQYSAPlQL 188
Cdd:PRK12665 126 NAFLAGDLFNLYVGFEILLVASYVLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVRLD-EL 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 189 ASFADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMIMLEPlTKELSYPFIIFALW 268
Cdd:PRK12665 204 PSGTRTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP-GGGLDTLLMVVALL 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 269 GVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARG 348
Cdd:PRK12665 283 TMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGG 362
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 40804674 349 LQMVLPLMTTWWFIASLaNLA-LPPLPNLMGELMILTS---LFNWSHWTLAltgAGTLITAGYSLY 410
Cdd:PRK12665 363 LAKASPLLAVLFFVPAL-NLGgIPPFSGFIGKVALLEAgaeDGTWLAWALV---AGGVVTSLLTLY 424
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
31-413 |
6.94e-13 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 70.15 E-value: 6.94e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 31 SLIIALASLTWLesLSETGWTSLNLYMATDPLSTPLLVLTCWLLPLMILASQNHTALEPINRQRMYITLLTSLQFFLILA 110
Cdd:COG1007 42 GLLLALALLLLA--LGGGTGTAFGGMFVVDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFATLGMMLMA 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 111 fSATEIIMFYIMFEATLIPTLVIITRWGNQTERLNAGT-YFLFYTLA------------GSlpllvallllqnsTGTLSL 177
Cdd:COG1007 120 -SANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFLLGALSsgfllygisllyGA-------------TGSLNL 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 178 LTLqySAPLQLASFADKLWWAGCLL---AFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLlKLGGYGM-MRMMIM-LE 252
Cdd:COG1007 186 AGI--AAALAAGGANSPLLLLGLVLvlaGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAAlLRLLVEaFP 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 253 PLTKELSYPFIIFALwgVIMT-GSIC-LRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALF-C 329
Cdd:COG1007 263 GLAADWQLLLAVLAV--LSMTvGNLAaLAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAFaV 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 330 LANTNYERTHSRTMVLARGLQMVLPLMtTWWFIASLANLA-LPPLPNLMGELMILTSLFNWSHWTLALTGA-GTLITAGY 407
Cdd:COG1007 341 ILLLSRKGGEAEEIEDLAGLARRSPLL-ALAMTIFLLSLAgIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVlNSVISAYY 419
|
410
....*....|
gi 40804674 408 SL----YMFL 413
Cdd:COG1007 420 YLrvvkAMYF 429
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
98-409 |
1.04e-12 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 70.46 E-value: 1.04e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 98 TLLTSLQFFLILAFSATEIIMFYIMFEATLIPTLVIITRWGNQTERLNAGTyfLFYTLAGSLPLLVALLLLQNSTGTLSL 177
Cdd:PRK12650 114 LLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIARSGSGGEAGSIRT--LILTFFGGLTLLAAVAIAATQTGTTSL 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 178 ltlqySAPLQLASFADKLWWAGcLLAFLVKMPLYG------VHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMIML 251
Cdd:PRK12650 192 -----SGILHSDVWAEKPGLTT-VVAVLIAVAAFTksaqfpFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVF 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 252 EPLTKeLSYPFIIFALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLA 331
Cdd:PRK12650 266 HDVAV-WNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLI 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 332 NTNYERTHSRTMVLARGLQMVLPLMTTWWFIASLANLALPPLPNLMGELMILTSLF-----NWSHWTLALT-GAGTLITA 405
Cdd:PRK12650 345 GVVDHQAGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSKEGMLTAFLeapggNAGVVLLLVGaALGAVFTF 424
|
....
gi 40804674 406 GYSL 409
Cdd:PRK12650 425 AYSA 428
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
76-407 |
1.76e-12 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 69.03 E-value: 1.76e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 76 LMILASQNHTALEPINRQRMyitlltslqFFLILAFSATEIIM------FYIMFEATLIpTLVIITRWGNQTERLNAGTY 149
Cdd:PRK08377 93 IMSIFSLKAVEVEPIDKYAM---------LFLLLMLGATGMIAtgdifnLFVFMEITAI-TAYALTAYNKTGEAAEASMK 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 150 FLFYTLAGSLPLLVALLLLQNSTGTLSLLTLQysaplQLASFAD----KLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAP 225
Cdd:PRK08377 163 YIVLGGIGSSFFLIGVALIYGATGTLNMAHIA-----QLAGTIDptvaQVGLALLIFGLAVEAELFPLNAWAPDAYQAAP 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 226 IAGSMVLAAVLLKLGGYGMMRMMIMLEPLTKELSYP--FIIFALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGIL 303
Cdd:PRK08377 238 HPITVMFSAFVVKAGLYAMARILYLMQNANGWSSVLklVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALA 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 304 IQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQMVLPLMTTWWFIASLANLALPPLPNLMGELMIL 383
Cdd:PRK08377 318 LGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRII 397
|
330 340
....*....|....*....|....*
gi 40804674 384 TSLFNWSH-WTLALTGAGTLITAGY 407
Cdd:PRK08377 398 LAGLSAGYtWPVALVLGASVVEAVY 422
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
214-402 |
5.86e-12 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 68.02 E-value: 5.86e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 214 HLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRmmimLEPLTKELSYPFIIFALWGV---IMTGSICLRQTDLKSLIAY 289
Cdd:PRK12647 215 HFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLAR----LNPVLGGTPLWQTILPLFGGltmLTGALLAVRQTDLKLILAY 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 290 SSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQMVLPLMTTWWFIASLANLA 369
Cdd:PRK12647 290 STVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMPITAAAALLAALSMAG 369
|
170 180 190
....*....|....*....|....*....|...
gi 40804674 370 LPPLPNLMGELMILTSLFNWSHWTLALTGAGTL 402
Cdd:PRK12647 370 LPPLFGFLAKELIYEALLEAPLWSLILTVAAVL 402
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
96-387 |
1.76e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 65.89 E-value: 1.76e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 96 YITLLTSLQFFLILAFSATEIIMFYIMFEATLIPTLVIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTL 175
Cdd:PRK08376 123 YYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTL 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 176 SLLTLQYSAPLQlASFADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLaaVLLKLGG-YGMMRMMIMLEPL 254
Cdd:PRK08376 203 NMAYLAVKMSEN-PTVVAKIALALFIAGLAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARVLFSIYGP 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 255 T---KELSYPFIIFALWGVIMTGSICLRQTDLKSLIAYSSVSHMG---------LVAGGILIQTPWGFT---GALILMIA 319
Cdd:PRK08376 280 AinlATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGymllglgvgLAALGDPAMASYGEIalaGGIYHIVN 359
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 40804674 320 HGLTSSALFCLANTNYERTHSRTMVLARGLQMVLPLMTTWWFIASLANLALPPLPNLMGELMILTSLF 387
Cdd:PRK08376 360 HALYKALLFLTAGAVIYETGTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSA 427
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
201-387 |
1.10e-10 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 63.75 E-value: 1.10e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 201 LLAFL---VKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMI-MLEPLTKELSYPFIIF----ALWGVIM 272
Cdd:PRK06521 214 LLALFgfgAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVFdLLGAPGWWWGVLVLALgaisAVLGVLY 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 273 TgsicLRQTDLKSLIAYSSVSHMGLV-----------AGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSR 341
Cdd:PRK06521 294 A----LAEHDLKRLLAYSTIENIGIIfvglglamvfiAYGMPLLAALALTAALYHLLNHALFKSLLFLGAGAVLHATGTR 369
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 40804674 342 TMVLARGLQMVLPLMTTWWFIASLANLALPPLPNLMGELMILTSLF 387
Cdd:PRK06521 370 DMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSLL 415
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
171-402 |
1.30e-10 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 63.07 E-value: 1.30e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 171 STGTLSLLTLQysaplQLASFADKLWWAGCLLAFLVKMPLYGVHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRMMI 249
Cdd:PRK06525 189 QTGTFALSALS-----GLHGSLKYLVFLGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQ 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 250 MLEPLTKELSYPFIIFALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQ---TPWGFTGALILMIAHGLTSSA 326
Cdd:PRK06525 263 SMGPIPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAilgSRLALEGSIAYIFNHAFAKSL 342
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 40804674 327 LFCLANTNYERTHSRTMVLARGLQMVLPLMTTWWFIASLANLALPPLPNLMGELMILTSLFNWSHWTLALTGAGTL 402
Cdd:PRK06525 343 FFLVAGALSYSCGTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVL 418
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
91-420 |
1.38e-10 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 63.62 E-value: 1.38e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 91 NRQRMYITLLTsLQFFLILAFSATEIIMFYIMFEATLIPTLVIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQN 170
Cdd:PRK12646 108 NLPRFYFYLTL-FMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYI 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 171 STGTLSLLTLQYsaplQLASFADKLWWAGCLLAFLV----KMPLYGVHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMM 245
Cdd:PRK12646 187 MTGTNNITEILG----QADHIKNHGLFIPMIFMFLLgaftKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLF 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 246 RMMIMLEpLTKELSYPFIIFALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVA-----GGILIQTPWG---------FT 311
Cdd:PRK12646 262 RFTPLLG-LSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMamvgiGGGYAQHQQDaiasiyvfvLF 340
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 312 GALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQMVLPLMTTWWFIASLANLALPPLPNLMGELMILTSLFN--- 388
Cdd:PRK12646 341 AALFHLMNHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQtgq 420
|
330 340 350
....*....|....*....|....*....|....*....
gi 40804674 389 WSHWTLALTGAGTLI-------TAGYSLYMFLMTQRGPL 420
Cdd:PRK12646 421 LSQFSLISMIIIVFIgviasifTFTYALYMVKEVFWGKY 459
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-388 |
3.86e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 61.76 E-value: 3.86e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 109 LAFSaTEIIMFYIMFEATLIPTLVIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSLltlqysAPLQL 188
Cdd:PRK06589 132 IALS-SDLFTMFVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYTKTGNLDF------VSGGL 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 189 ASFADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMIMleplTKELSYPFIIFALW 268
Cdd:PRK06589 205 FSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLY----IFGLSYLQRIFAEF 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 269 G---------VIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTH 339
Cdd:PRK06589 281 NwlifipivsIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKK 360
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 40804674 340 SRTMVLARGLQMVLPLMTTWWFIASLANLALPPLPNLMGELMILTSLFN 388
Cdd:PRK06589 361 EDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASE 409
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
201-387 |
3.87e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 61.89 E-value: 3.87e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 201 LLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMIMLEPLTKELSYPFIIFALWGVIMTGSI-CLR 279
Cdd:PRK07691 216 LFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLILILALLTIIFGVIgAVA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 280 QTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQMVLPLMTTW 359
Cdd:PRK07691 296 YFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWM 375
|
170 180
....*....|....*....|....*...
gi 40804674 360 WFIASLANLALPPLPNLMGELMILTSLF 387
Cdd:PRK07691 376 FFIAALSLAGIPPLSGFYGKFFIVEGTF 403
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
73-345 |
6.17e-10 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 60.71 E-value: 6.17e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 73 LLPLMI-LASQNHTALEPINRQRMYITLltSLqFFLILAFSATEIIMFYIMFEATLIPTLVIITRWGNQTERLNAGTYFL 151
Cdd:MTH00062 52 LLVLFLgLYSQVMFYNLLSGVSRFFLFL--SL-IFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFL 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 152 FYTLAGSLPLLVALLLLQNSTGTLSLLTLQYSAPLQLASFadklwWAGCLLaFLVKMPLYGVHLWLPKAHVEAPIAGSMV 231
Cdd:MTH00062 129 GYLLLTSLPLLLCLLYLSLVNGSFNFSDWGSDDSVSLIVY-----YVLSFM-FITKVPLFPFHTWLPIVHAEASSPVSIF 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 232 LAAVLLKLGGYGMMRMMIMLEPLTKeLSYPFIIFALWGVIMTGSicLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFT 311
Cdd:MTH00062 203 LSGYIMKLGLLGVYRFCGFIFSGSF-LGYLFLCCLFSVFFLITA--CSELDGKRWLAFLSLSHILVPVLGLFVGDWSSIN 279
|
250 260 270
....*....|....*....|....*....|....
gi 40804674 312 GALILMIAHGLTSSALFCLANTNYERTHSRTMVL 345
Cdd:MTH00062 280 LSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVL 313
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
201-393 |
8.16e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 60.90 E-value: 8.16e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 201 LLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMIM-----LEPLTKELSYPFIIFALWGVIMTGS 275
Cdd:PRK12662 216 MVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDvfkanFVFTTLPFNNVFMILAALAIVFGSV 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 276 ICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQMVLPL 355
Cdd:PRK12662 296 LAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSMPK 375
|
170 180 190
....*....|....*....|....*....|....*...
gi 40804674 356 MTTWWFIASLANLALPPLPNLMGELMILTSLFNWSHWT 393
Cdd:PRK12662 376 ITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWI 413
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
173-388 |
8.32e-10 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 61.00 E-value: 8.32e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 173 GTLSLLTLQYSAplQLASFADKLWWAGcLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMIMLE 252
Cdd:PRK08042 162 GTLDLRLLDMRM--QQLPLGSDIWLLG-VIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGG 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 253 PLTKELSYPFIIFALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLV-----AG--GILIQTP----WGFTGALILMIAHG 321
Cdd:PRK08042 239 NAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIIllglgAGvtGIALEQPaliaLGLVGGLYHLLNHS 318
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 40804674 322 LTSSALFCLANTNYERTHSRTMVLARGLQMVLPLMTTWWFIASLANLALPPLPNLMGELMILTSLFN 388
Cdd:PRK08042 319 LFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
94-385 |
5.82e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 55.22 E-value: 5.82e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 94 RMYITLLTSLQFFLILAFSATEIIMFyIMFEATLIPTLVIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTG 173
Cdd:PRK12649 112 RYYQYLLLFMGSMIGMVFSGNTIQLF-IFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITG 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 174 TLSLLTLQYSAPLQLASFADKLWWAGCLLAFL------VKMPLYgvhLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMR 246
Cdd:PRK12649 191 TYDIATILQDSELIENIKGHPLFLITLILIFIgaaaksAQGPFY---IWLPNA-MEAPTPVSAFLhSATMVKAGVYLVAR 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 247 MmimlEPLTKELSYPFIIFALWGVI---MTGSICLRQTDLKSLIAYSSVS---HMGLVAGGILIQTP-WGFTGALILMIA 319
Cdd:PRK12649 267 I----HPIFSGTEAWFILVSGTGMItmvLAGFLAFRQTDIKAILAYSTISqlaYLMTMYGYTTYHEPgLGVAAATFHLLN 342
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 40804674 320 HGLTSSALFCLANTNYERTHSRTMVLARGLQMVLPLMTTWWFIASLANLALPPLPNLMGELMILTS 385
Cdd:PRK12649 343 HATFKACLFLVAGIVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKEMFYET 408
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
233-382 |
2.51e-07 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 52.73 E-value: 2.51e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 233 AAVLLKLGGYGMMRMMIMLEPLTKELSY------PFIIFALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQT 306
Cdd:PRK06277 234 SALLQTFSKFVLVALMLVIFKLFGGLSYfpsaqgVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGT 313
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 40804674 307 PWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQMVLPLMTTWWFIASLANLALPPLPNLMGELMI 382
Cdd:PRK06277 314 PLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLML 389
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
201-409 |
5.67e-07 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 51.87 E-value: 5.67e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 201 LLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLlKLGGYGMMrMMIMLEPLTkELSYPFIIFALWGVIMT---GSI- 276
Cdd:TIGR01770 210 LVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVP-KIAIFAVF-LRLFLYILF-GFSEAWQIFLAIIAFLSmliGNFg 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 277 CLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALF-CLANT-NYERTHSRTMVLARGLQMVLP 354
Cdd:TIGR01770 287 ALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAFgVLSLLrSYKDEWIEYISDFAGLFKTNP 366
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 40804674 355 LMTTWWFIASLANLALPPLPNLMGELMILTSLFNWSHWTLALTGA-GTLITAGYSL 409
Cdd:TIGR01770 367 ILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVlTSVIGAFYYL 422
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
171-413 |
2.33e-06 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 49.82 E-value: 2.33e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 171 STGTLSLLTLQYSapLQLASFADKLWWAGCLL---AFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLlKLGGYGM-MR 246
Cdd:PRK05777 180 ATGSLSFAGIAKA--LADGSGNSLLLLFGLVFllvGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAVlLR 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 247 MMIMLEPLTKELSYPFIIFALWGVIMTGSI-CLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSS 325
Cdd:PRK05777 257 LLVVAFGGLSEDWQQVLAIIAIASMLVGNLaALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTL 336
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 326 ALF----CLANTNYERTHSRTMvlaRGLQMVLPLMTTWWFIASLANLALPPLPNLMGELMILTSLFNWSHWTLALTGA-G 400
Cdd:PRK05777 337 GAFgvisLLRRKGGEAESISDF---AGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVlN 413
|
250
....*....|....*..
gi 40804674 401 TLITAGYSL----YMFL 413
Cdd:PRK05777 414 SAIGAFYYLrvikLMYF 430
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
60-383 |
4.52e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 49.19 E-value: 4.52e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 60 DPLSTPLLVLTCWLLPLMILASQNHTALEP-INRQRMYITLLTslqFFLILAFSATEIIMFYIMFEATLIPTLVIITRWG 138
Cdd:MTH00032 79 DTLSVTMLLVISSISTLVHIYSTSYMSDDPhVPRFLCYLSLFT---FLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWT 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 139 NQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSLLTLQ------------------YSAPLQLASFADKLWWAGC 200
Cdd:MTH00032 156 TRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNggsvgsgimdrgyygggaYESPLAPFAIIGILLLIGC 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 201 LlaflVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMimlePLTKELSYPFIIFALWGVI---MTGSIC 277
Cdd:MTH00032 236 I----GKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSF----PLFEKAPLTLLIITIFGALtafFAATVG 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 278 LRQTDLKSLIAYSSVSHMGLVAggILIQTPWGFTGALILMIAHGLTSSALFCLA-----NTNYERTHSRTMvlaRGLQMV 352
Cdd:MTH00032 308 LVQNDLKKVIAYSTCSQLGYMV--LIIGIEGSHNVGLFHLVNHAFFKALLFLSAgsvihSTTVDEQDMRKM---GGLIHS 382
|
330 340 350
....*....|....*....|....*....|.
gi 40804674 353 LPLMTTWWFIASLANLALPPLPNLMGELMIL 383
Cdd:MTH00032 383 IPFTYTMMLIGSFSIMGLPYLTGFYSKDLIL 413
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
214-410 |
4.89e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 49.15 E-value: 4.89e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 214 HLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRMMIMLEPLTkELSYPFIIFALWGVIMTGSICLRQTDLKSLIAYSSV 292
Cdd:PRK12644 223 HFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVARLAPGFADVP-VWRPTVLVLGLATMLLGGWRALRQHDLKLILAYGTV 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 293 SHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQMVLPLMTTWWFIASLANLALPP 372
Cdd:PRK12644 301 SQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALFLVVGIIDHSTGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPP 380
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 40804674 373 LPNLMGELMILTSLFN------WSHWTLALTGAGTLITAGYSLY 410
Cdd:PRK12644 381 LLGFVAKEAALEAVLHdgalgpAGPVVLAGIVLGSILTVAYSLR 424
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
197-418 |
6.11e-06 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 48.87 E-value: 6.11e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 197 WAGCLLAFLVKM---------PLygvHLWLPKAhVEAPI-------AGSMVLAAVLLklggygMMRMmimlEPLTKELSY 260
Cdd:PRK07376 224 WLALLLCILVFLgpmaksaqfPL---HVWLPDA-MEGPTpisalihAATMVAAGVFL------VARM----YPVFEQFPA 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 261 PFIIFALWGVI---MTGSICLRQTDLKSLIAYSSVSHMG--LVAGGIliqtpWGFTGALILMIAHGLTSSALFCLANT-- 333
Cdd:PRK07376 290 VMTVIAWTGAItafLGASIALTQNDIKKGLAYSTISQLGymVMAMGC-----GAYSAGLFHLMTHAYFKAMLFLGSGSvi 364
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 334 -------NYERTHSRTMVLARGLQMVLPLMTTWWFIASLANLALPPLPNLMGELMILTSLFNWSH--WTLALTGAGtlIT 404
Cdd:PRK07376 365 hgmeevvGHDPVLAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEANPalWFVGFLTAG--MT 442
|
250
....*....|....
gi 40804674 405 AGYSLYMFLMTQRG 418
Cdd:PRK07376 443 AFYMFRMYFLTFEG 456
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
201-403 |
1.29e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 47.54 E-value: 1.29e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 201 LLAFLVKMPLYGVHLWLPKAHVEA--PIAGsmvLAAVLLKLGGYGMMRMMIMLEPLTKELSYPFIIFALWGV----IMTG 274
Cdd:PRK12666 217 LVVFLIKAAMWPLNFWLPPAYAAAsaPVAA---LFAIMTKVGIYAILRLSTLLFGPEAGASAGFGQDWLLPGglatLAFG 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 275 SI-CLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTnYERTHSRTM-VLARGLQMV 352
Cdd:PRK12666 294 AIgVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLADL-VERQRGAAAdRLAVTPELY 372
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 40804674 353 LPLMTTW-----------------WFIASLANLALPPLPNLMGELMILTSLFN-------WSHWTLAL-TGAGTLI 403
Cdd:PRK12666 373 DLDEEEEeevgvaipatmallgllFFICALALAGLPPLSGFLGKFALLQALLNppgagaaWWLWALVLlSGLAALI 448
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
99-387 |
1.80e-05 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 47.09 E-value: 1.80e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 99 LLTSLQFFLILAFS----ATEIIMFYIMFEATLIPTLVIITRWGNQTErlnAGTYFLFYTLAGSLPLLVALLLLQNSTGT 174
Cdd:PRK06459 73 WLSSLYILTILGMAivltSDNYLLFLAGWEIMTIPSYVAIALTKKNKR---PAFVFMAFGELSTVLILAGFAWAFIISGT 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 175 LSLLTLQYSAPLQLASFAdklwwagcllaFLVKMPLYGVHL--WLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMIMLE 252
Cdd:PRK06459 150 TNFSYLPSPVPLILASFG-----------FIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQ 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 253 PLTKE-LSYPFIIFALWGVIMTGSICLRQTDLKSLIAYSSVSHMG--LVAGGILIQTPWGFT--------GALILMIAHG 321
Cdd:PRK06459 219 TIPIGyFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGaiLVALGLYMVTKQLITsiehfsliTVILYSFAHS 298
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 40804674 322 LTSSALFCLANTnyerTHSRTMVLARGLQMVLPLMTTWWFIASLAnlALPPLPNLMGELMILTSLF 387
Cdd:PRK06459 299 VAKTGLFLSSGL----QEKQSITYSKKIRNRWIELGLTLLASSLS--GLLPNIGGVASWLLLESLF 358
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
212-415 |
3.19e-05 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 46.22 E-value: 3.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 212 GVHLWLPKAH-----VEAPI-AGSMVLAAVLLklggygmmrmMIMLEPLTKELSYPFIIFALWG---VIMTGSICLRQTD 282
Cdd:MTH00020 228 GLHTWLPDAMegptpVSALIhAATMVTAGVFL----------LIRSSPLFEQAPLALIIVTIVGsltVFFAATVGLVQND 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 283 LKSLIAYSSVSHMG--LVAGGIliqtpWGFTGALILMIAHGLTSSALFCLANTN-YERTHSRTMVLARGLQMVLPLMTTW 359
Cdd:MTH00020 298 LKKVIAYSTCSQLGymVVACGL-----SHYSISLFHLMNHAFFKALLFLSAGSViHALSDEQDMRKMGGLISFLPLTYIF 372
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 40804674 360 WFIASLANLALPPLPNLMGELMILTSLFN-----WSHWtlaLTGAGTLITAGYSLYMFLMT 415
Cdd:MTH00020 373 FLIGSLSLMGFPYLTGFYSKDLILELAFGqyyliFAYW---LGCFSALLTAFYSIRLIYLT 430
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
201-414 |
3.28e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 42.57 E-value: 3.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 201 LLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLlKLGGYGMMRMMImlepLTKELSYPFIIFALWGVIMTGSICLRQ 280
Cdd:MTH00144 91 LLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQ-KVAPLFLLSNFL----DLYWLAYLLCVISVLSALVGSIGGLNQ 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 281 TDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTssaLFCLANTNYerthSRTMVLARGLQMVLPLMTTWW 360
Cdd:MTH00144 166 TQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFL---FFSLWSGDS----GSMKDLGSLKPSYKTGLSIIS 238
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 40804674 361 FIASLAnlALPPLPNLMGELMILTSLFNWSHWTLALTG-AGTLITAGYSLYMFLM 414
Cdd:MTH00144 239 LLLSLG--GLPPFLGFCSKLLVLISSMESSPLLLILLLlLGSLISLFFYLSVFFS 291
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
108-397 |
5.82e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 41.94 E-value: 5.82e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 108 ILAFSATEIIMFYIMFEATLIPTLVIITRWGNQTERLNAG-TYFLFYTLAGSLPLLVALLLLQNSTGT-LSLLTLQYSAP 185
Cdd:MTH00196 7 LCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGlKYFVLGALSSGLFLFGCALLCGTTGGLhLSYINLVLNSG 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 186 LQLASFADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPiagsMVLAAVLLKLGGYGMMRMMIMLEPltkelsyPFIIF 265
Cdd:MTH00196 87 QSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAP----TKTTALLAIVPKLGIFSILVSIGL-------NVNIL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 266 ALWGV--IMTGSI-CLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLA---NTNYErth 339
Cdd:MTH00196 156 LIGGLfsLFVGAIgALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVFSIIlalNVYKN--- 232
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 40804674 340 srTMVLARGLQMVLPLMTTWWFIASLANLALPPLPNLMGELMILTSLFNWSHWTLALT 397
Cdd:MTH00196 233 --LIIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLL 288
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
214-419 |
2.16e-03 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 40.68 E-value: 2.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 214 HLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRMmimlEPLTKELSYPFIIFALWGVIMT--GSI-CLRQTDLKSLIAY 289
Cdd:PRK12645 230 YIWLPDA-MEAPTPVSAYLhSATMVKAGIYLVARF----TPIFAGSQVWFWTVTLVGLITLfwGSLnAVKQTDLKGILAF 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 290 SSVSHMGLV-----AGGILIQTPWG--------FTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQMVLPLM 356
Cdd:PRK12645 305 STVSQLGLImsllgIGAASLHYQGDdskiyaaaITAAIFHLINHATFKGSLFMIVGIVDHETGTRDIRKLGGLMTIMPIT 384
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 40804674 357 TTWWFIASLANLALPPLPNLMGELMILTSLFNWSHWTL-ALTGAGTLI----------TAGYSLYMFLMTQRGP 419
Cdd:PRK12645 385 FTIALIGALSMAGLPPFNGFLSKEMFFESMLNATEANLfSLDTWGVLFpviawvasvfTFVYSIIFIFKTFFGK 458
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
214-396 |
2.57e-03 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 40.28 E-value: 2.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 214 HLWLPKAhVEAPIAGSMVLAAVLLKLGGYGMMRMMIMLEpltkeLSyPFIIFALWGV-----IMTGSICLRQTDLKSLIA 288
Cdd:PRK07390 241 HLWLDEA-MEGPNPASILRNSVVVATGAWVLIKLQPVLA-----LS-PVALTVLIVIgtvtaIGASLVAIAQIDIKRALS 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 289 YSSVSHMGLVAGGILIQTPwgfTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQMVLPLMTTWWFIASLANL 368
Cdd:PRK07390 314 YSTSAYLGLVFIAVGLQQP---DIALLLLLTHAIAKALLFMSVGSIILTTITQDLTELGGLWSRMPATTLAFLVGSAGLV 390
|
170 180
....*....|....*....|....*...
gi 40804674 369 ALPPLPNLMGELMILTSLFNWSHWTLAL 396
Cdd:PRK07390 391 ALLPLGGFWALLRLADGLWAVSPWLVGV 418
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
280-409 |
4.91e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 39.40 E-value: 4.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 280 QTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQMVLPLMTTW 359
Cdd:PRK12648 292 QHDLKGLLAYSTISHLGLITLLLGLGSPLAAVAAIFHIINHATFKASLFMAAGIIDHETGTRDMRRLSGLRRLMPITATL 371
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 40804674 360 WFIASLANLALPPLPNLMGELMIL-----TSLFNWSHWTLAL--TGAGTLiTAGYSL 409
Cdd:PRK12648 372 AMVAAAAMAGVPLLNGFLSKEMFFaetldTHLLGSLDWLLPVaaTLAGAF-SVAYSL 427
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
95-388 |
4.97e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 38.80 E-value: 4.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 95 MYITLLTSLQFFLILAFSATEIIMFYIMFEATLIPTLVIITRWGNQTERLNAGTYFLFYTLAGSLPLLVallllqnstgt 174
Cdd:MTH00200 5 ILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFG----------- 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 175 lSLLTLQYSAPLQLASFADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLlKLGGYgmmrmMIMLEPL 254
Cdd:MTH00200 74 -GLLNAWTSGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQ-KLAPF-----ALLIQLA 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 255 TKELSYPFIIFALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTpwgFTGALILMIAHGLTSSALFCLANTN 334
Cdd:MTH00200 147 PALNSNILLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSP---NLALLYLLLYVIITLTVFLLLNLLN 223
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 40804674 335 YERTHSRTMVLARGlqmvlPLMTTWWFIASLANLALPPLPNLMGELMILTSLFN 388
Cdd:MTH00200 224 STKINSLSSSKTKN-----PILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSK 272
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
172-413 |
5.52e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 38.91 E-value: 5.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 172 TGTLSLLTLQYSAPLQLASFADKLwwAGCLLAF--LVKMPLYGVHLWLPKAhVEAPIAGSMVLAAVLLKLGGYGMMRMMI 249
Cdd:PRK08168 178 VGSLSLSALWAHLAAQGASPSLQA--AALLLVLavILKTAQLPVHGWLIQV-MEAPTPVSALLHAGVVNLGGFVLIRFAP 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 250 MLEpLTKELSYPFIIFALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLvaggILIQTPWG-FTGALILMIAHGLTSSALF 328
Cdd:PRK08168 255 LLE-QAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGF----MLLECGLGlYELALLHLVAHSLYKAHAF 329
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40804674 329 CLANTNYERTHSRTM-----------VLARGLQ--MVLPLMTTWWFIASLANLALPPLPNLMGELMILTSLFNWSHWTLA 395
Cdd:PRK08168 330 LSASEAVRDTRLRRLqgpqsaagvvsLLLAPLLsaALVLLLQSLLPLGAWPWWWSAVLALAWAPLLWQPCASGASTLSGL 409
|
250
....*....|....*...
gi 40804674 396 LTGAGTLitAGYSLYMFL 413
Cdd:PRK08168 410 GLGLLLV--AGLTALAFL 425
|
|
| |
