|
Name |
Accession |
Description |
Interval |
E-value |
| ND3 |
MTH00106 |
NADH dehydrogenase subunit 3; Provisional |
1-115 |
6.81e-67 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177168 [Multi-domain] Cd Length: 115 Bit Score: 197.08 E-value: 6.81e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34538605 1 MNLYTVIFINILLSLTLILVAFWLPQMNLYSEKANPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQ 80
Cdd:MTH00106 1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
|
90 100 110
....*....|....*....|....*....|....*
gi 34538605 81 TIKTSTMMIMAFILVTILSLGLAYEWTQKGLEWTE 115
Cdd:MTH00106 81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
|
|
| ND3 |
MTH00136 |
NADH dehydrogenase subunit 3; Provisional |
1-115 |
4.11e-50 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177194 [Multi-domain] Cd Length: 116 Bit Score: 154.69 E-value: 4.11e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34538605 1 MNLY-TVIFINILLSLTLILVAFWLPQMNLYSEKANPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAI 79
Cdd:MTH00136 1 MNLItTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80
|
90 100 110
....*....|....*....|....*....|....*.
gi 34538605 80 QTIKTSTMMIMAFILVTILSLGLAYEWTQKGLEWTE 115
Cdd:MTH00136 81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
|
|
| ND3 |
MTH00069 |
NADH dehydrogenase subunit 3; Provisional |
3-115 |
1.42e-45 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177141 [Multi-domain] Cd Length: 114 Bit Score: 143.21 E-value: 1.42e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34538605 3 LYTVIFINILLSLTLILVAFWLPQMNLYSEKANPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTI 82
Cdd:MTH00069 2 IMLMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQLN 81
|
90 100 110
....*....|....*....|....*....|...
gi 34538605 83 KTSTMMIMAFILVTILSLGLAYEWTQKGLEWTE 115
Cdd:MTH00069 82 TPTNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
|
|
| ND3 |
MTH00113 |
NADH dehydrogenase subunit 3; Provisional |
1-114 |
1.05e-42 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177175 [Multi-domain] Cd Length: 114 Bit Score: 135.78 E-value: 1.05e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34538605 1 MNLYTVIFINILLSLTLILVAFWLPQMNLYSEKANPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQ 80
Cdd:MTH00113 1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80
|
90 100 110
....*....|....*....|....*....|....
gi 34538605 81 TIKTSTMMIMAFILVTILSLGLAYEWTQKGLEWT 114
Cdd:MTH00113 81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
|
|
| ND3 |
MTH00042 |
NADH dehydrogenase subunit 3; Validated |
1-115 |
1.73e-38 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 177117 [Multi-domain] Cd Length: 116 Bit Score: 125.09 E-value: 1.73e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34538605 1 MNLYTVIFINILLSLTLILVAFWLPQMNLYSEKANPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQ 80
Cdd:MTH00042 2 TNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATL 81
|
90 100 110
....*....|....*....|....*....|....*
gi 34538605 81 TIKTSTMMIMAFILVTILSLGLAYEWTQKGLEWTE 115
Cdd:MTH00042 82 ITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
|
|
| ND3 |
MTH00203 |
NADH dehydrogenase subunit 3; Provisional |
6-113 |
5.38e-34 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214456 [Multi-domain] Cd Length: 112 Bit Score: 113.45 E-value: 5.38e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34538605 6 VIFINILLSLTLILVAFWLPQMNLYSEKANPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTIKTS 85
Cdd:MTH00203 7 FFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQLSSLS 86
|
90 100
....*....|....*....|....*...
gi 34538605 86 TMMIMAFILVtiLSLGLAYEWTQKGLEW 113
Cdd:MTH00203 87 LLLAFLFLIL--LTLGLIYEWLQGGLEW 112
|
|
| Oxidored_q4 |
pfam00507 |
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; |
18-112 |
7.78e-30 |
|
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
Pssm-ID: 459838 [Multi-domain] Cd Length: 94 Bit Score: 102.50 E-value: 7.78e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34538605 18 ILVAFWLPQMNLYSEKANPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLlpLPWAIQTIKTSTMM-IMAFILVT 96
Cdd:pfam00507 1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRELGWFGfVEMLIFIA 78
|
90
....*....|....*.
gi 34538605 97 ILSLGLAYEWTQKGLE 112
Cdd:pfam00507 79 ILLVGLVYAWKKGALE 94
|
|
| ND3 |
MTH00148 |
NADH dehydrogenase subunit 3; Provisional |
1-115 |
1.06e-28 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214433 [Multi-domain] Cd Length: 117 Bit Score: 100.32 E-value: 1.06e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34538605 1 MNLYTVIFINILLSLTLILVAFWLPQMNLY-SEKANPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAI 79
Cdd:MTH00148 2 LSILLSLLFALILSPVLLLLGLVLSKRSYSdREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSL 81
|
90 100 110
....*....|....*....|....*....|....*.
gi 34538605 80 QTIKTSTMMIMAFILVTILSLGLAYEWTQKGLEWTE 115
Cdd:MTH00148 82 GSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
|
|
| ND3 |
MTH00202 |
NADH dehydrogenase subunit 3; Provisional |
1-113 |
4.89e-27 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214455 [Multi-domain] Cd Length: 117 Bit Score: 96.21 E-value: 4.89e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34538605 1 MNLYTVIFINILLSLTLILVAFWLPQMNLYS-EKANPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAI 79
Cdd:MTH00202 2 LLILFMSILSILISSLLFLVSWMLSFRSLMDrEKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVL 81
|
90 100 110
....*....|....*....|....*....|....
gi 34538605 80 QTIKTSTMMIMAFILVTILSLGLAYEWTQKGLEW 113
Cdd:MTH00202 82 KSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDW 115
|
|
| ND3 |
MTH00161 |
NADH dehydrogenase subunit 3; Provisional |
1-113 |
8.26e-25 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177217 [Multi-domain] Cd Length: 113 Bit Score: 90.22 E-value: 8.26e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34538605 1 MNLYTVIFINILLSLTLILVAFWLPQMNLYSEKANPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQ 80
Cdd:MTH00161 1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80
|
90 100 110
....*....|....*....|....*....|...
gi 34538605 81 TIKTSTMMIMAFILVTILSLGLAYEWTQKGLEW 113
Cdd:MTH00161 81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
|
|
| NuoA |
COG0838 |
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ... |
1-113 |
2.31e-22 |
|
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440600 [Multi-domain] Cd Length: 117 Bit Score: 84.02 E-value: 2.31e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34538605 1 MNLYTVIFINILLSLTL----ILVAFWLPQMNLYSEKANPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLLPLP 76
Cdd:COG0838 2 LSDYLPILIFLLVALGLalamLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWA 81
|
90 100 110
....*....|....*....|....*....|....*..
gi 34538605 77 WAIQTIKTSTMMIMAFILVtILSLGLAYEWTQKGLEW 113
Cdd:COG0838 82 VVFRELGWFGLIEMLVFIA-ILLVGLIYAWKKGALEW 117
|
|
| ND3 |
MTH00012 |
NADH dehydrogenase subunit 3; Validated |
1-114 |
6.06e-22 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 164588 [Multi-domain] Cd Length: 117 Bit Score: 83.37 E-value: 6.06e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34538605 1 MNLYTVIF-INILLSLTLILVAFWLPQMNLYS-EKANPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWA 78
Cdd:MTH00012 1 MSLMMIPMmISLILPPLVLGAAWVLAARSTADrEKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80
|
90 100 110
....*....|....*....|....*....|....*.
gi 34538605 79 IQTIKTSTMMIMAFILVTILSLGLAYEWTQKGLEWT 114
Cdd:MTH00012 81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
|
|
| ND3 |
MTH00055 |
NADH dehydrogenase subunit 3; Provisional |
7-113 |
2.80e-21 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177128 [Multi-domain] Cd Length: 118 Bit Score: 81.68 E-value: 2.80e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34538605 7 IFINILLSLTLILVAFWLPQM----NLYSEKANPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTI 82
Cdd:MTH00055 8 IFILLLFSIGLSTVISGASYIvgvkQPDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYNQI 87
|
90 100 110
....*....|....*....|....*....|.
gi 34538605 83 KTSTMMIMAFILVtILSLGLAYEWTQKGLEW 113
Cdd:MTH00055 88 GLFGFWVMYLFLI-ILTIGLIYEWVKGGLEW 117
|
|
| PRK06602 |
PRK06602 |
NADH:ubiquinone oxidoreductase subunit A; Validated |
2-114 |
8.96e-21 |
|
NADH:ubiquinone oxidoreductase subunit A; Validated
Pssm-ID: 180638 [Multi-domain] Cd Length: 121 Bit Score: 80.29 E-value: 8.96e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34538605 2 NLYTVIF--INILLSLTLILVAFWLPQMNLYSEKANPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLlpLPWAI 79
Cdd:PRK06602 8 YLPFLIFliVAIGLGILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFL--FPWAV 85
|
90 100 110
....*....|....*....|....*....|....*..
gi 34538605 80 qTIKTSTMM--IMAFILVTILSLGLAYEWTQKGLEWT 114
Cdd:PRK06602 86 -SFREIGWLgfVEAMIFILVLLVGLVYLWRKGALDWE 121
|
|
| ND3 |
MTH00018 |
NADH dehydrogenase subunit 3; Validated |
1-113 |
9.68e-19 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 164592 [Multi-domain] Cd Length: 113 Bit Score: 75.10 E-value: 9.68e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34538605 1 MNLYTVIFINILLSLTLILVAFWLPQMNLYSEKANPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQ 80
Cdd:MTH00018 1 YGLFILLIFSVVLSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYN 80
|
90 100 110
....*....|....*....|....*....|...
gi 34538605 81 TIKTSTMMIMAFILVtILSLGLAYEWTQKGLEW 113
Cdd:MTH00018 81 QIAPFGFWTMVGFLF-ILTLGLIYEWIKGGLEW 112
|
|
| ND3 |
MTH00030 |
NADH dehydrogenase subunit 3; Provisional |
3-113 |
4.85e-16 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 164603 [Multi-domain] Cd Length: 123 Bit Score: 68.42 E-value: 4.85e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34538605 3 LYTVIFINILLSLTLILVAFWLPQMNLYSEKANPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTI 82
Cdd:MTH00030 13 LLGVGIILLLVSISFTLGNSRIGLTKPDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWSIVFNQL 92
|
90 100 110
....*....|....*....|....*....|.
gi 34538605 83 KTSTMMIMAFILVtILSLGLAYEWTQKGLEW 113
Cdd:MTH00030 93 NLFSFWIVYTFLI-VLAIGLAYEWIKGGLEW 122
|
|
| PRK07928 |
PRK07928 |
NADH dehydrogenase subunit A; Validated |
1-114 |
5.21e-12 |
|
NADH dehydrogenase subunit A; Validated
Pssm-ID: 181171 [Multi-domain] Cd Length: 119 Bit Score: 57.76 E-value: 5.21e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34538605 1 MNLYTVIF----INILLSLTLILVAFWLPQMNLYSEKANPYECGFDPTSSARLP--FSMKFFLVAITFLLFDLEIALLLP 74
Cdd:PRK07928 1 MNVYIPILvlgaLAAAFAVVSVVVASLVGPKRYNRAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP 80
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 34538605 75 LPWAIQTIKTSTMMIMAFILVTIlSLGLAYEWTQKGLEWT 114
Cdd:PRK07928 81 WAVSFDALGVFGLVEMALFMLTV-FVAYAYVWRRGGLEWD 119
|
|
| PRK07756 |
PRK07756 |
NADH-quinone oxidoreductase subunit A; |
2-113 |
5.06e-11 |
|
NADH-quinone oxidoreductase subunit A;
Pssm-ID: 169084 [Multi-domain] Cd Length: 122 Bit Score: 55.13 E-value: 5.06e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34538605 2 NLYTVIFINILLSLTLILVAF----WLPQMNLYSEKANPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLLPlpW 77
Cdd:PRK07756 7 NSYMIVLIFLLLGILLPVVALtlgrMLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP--W 84
|
90 100 110
....*....|....*....|....*....|....*..
gi 34538605 78 AIQTIKTSTM-MIMAFILVTILSLGLAYEWTQKGLEW 113
Cdd:PRK07756 85 AVAYDKLGLFaLIEMLIFVVMLLVGLAYAWKKKVLQW 121
|
|
| ndhC |
CHL00022 |
NADH dehydrogenase subunit 3 |
4-114 |
5.85e-10 |
|
NADH dehydrogenase subunit 3
Pssm-ID: 176964 [Multi-domain] Cd Length: 120 Bit Score: 52.30 E-value: 5.85e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34538605 4 YTVIFINILLSLTLILVAFWLPQM----NLYSEKANPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLlpLPWAI 79
Cdd:CHL00022 7 YDIFWAFLIISSLIPILAFLISGLlapiSKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAM 84
|
90 100 110
....*....|....*....|....*....|....*.
gi 34538605 80 Q-TIKTSTMMIMAFILVTILSLGLAYEWTQKGLEWT 114
Cdd:CHL00022 85 SfDVLGVSAFIEALIFVLILIVGLVYAWRKGALEWS 120
|
|
| ND3 |
MTH00092 |
NADH dehydrogenase subunit 3; Provisional |
1-97 |
1.28e-07 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177155 Cd Length: 111 Bit Score: 46.04 E-value: 1.28e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34538605 1 MNLYTVIFINILLSLTLILVAFWLPQMNLYSEKANPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQ 80
Cdd:MTH00092 2 LVLIFVFLFTLLLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGLLVSDF 81
|
90
....*....|....*..
gi 34538605 81 TIKTSTMMIMAFILVTI 97
Cdd:MTH00092 82 SSLISFFMLMIFIFFGF 98
|
|
| PRK08489 |
PRK08489 |
NAD(P)H-quinone oxidoreductase subunit 3; |
33-113 |
2.26e-07 |
|
NAD(P)H-quinone oxidoreductase subunit 3;
Pssm-ID: 181448 [Multi-domain] Cd Length: 129 Bit Score: 45.81 E-value: 2.26e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34538605 33 KANPYECGFDPTSSARlPFSMKFFLVAITFLLFDLEIALLlpLPWAIQTIKTSTM-MIMAFILVTILSLGLAYEWTQKGL 111
Cdd:PRK08489 47 KLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFM--FPWAVDFKLLGLFgLIEMLLFIVLLTIGFIYAWKKGAL 123
|
..
gi 34538605 112 EW 113
Cdd:PRK08489 124 EW 125
|
|
| ND3 |
MTH00060 |
NADH dehydrogenase subunit 3; Provisional |
3-76 |
1.65e-03 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177132 Cd Length: 116 Bit Score: 35.26 E-value: 1.65e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 34538605 3 LYTVIFINILLSLTLILVAFWLPQMNLYS---EKANPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLLPLP 76
Cdd:MTH00060 4 LLFVFFVFFLLFLVIYFFHSGLWNNKIYSggfSWVSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80
|
|
|